Multiple sequence alignment - TraesCS1B01G168600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G168600 chr1B 100.000 4097 0 0 1 4097 299437024 299441120 0.000000e+00 7566
1 TraesCS1B01G168600 chr1A 91.960 1306 55 15 841 2106 259049255 259050550 0.000000e+00 1784
2 TraesCS1B01G168600 chr1A 92.165 753 20 15 2492 3222 259050550 259051285 0.000000e+00 1027
3 TraesCS1B01G168600 chr1A 91.617 167 14 0 3923 4089 259051864 259052030 8.860000e-57 231
4 TraesCS1B01G168600 chr1D 90.372 1101 41 24 2492 3554 204027370 204028443 0.000000e+00 1386
5 TraesCS1B01G168600 chr1D 94.492 581 23 7 819 1393 204023876 204024453 0.000000e+00 887
6 TraesCS1B01G168600 chr1D 89.138 580 20 11 1562 2106 204026801 204027372 0.000000e+00 682
7 TraesCS1B01G168600 chr1D 93.939 198 12 0 1377 1574 204025306 204025503 2.390000e-77 300
8 TraesCS1B01G168600 chr1D 90.419 167 15 1 3923 4089 204034134 204034299 6.900000e-53 219
9 TraesCS1B01G168600 chr1D 90.625 96 6 3 3781 3873 36611943 36612038 1.550000e-24 124
10 TraesCS1B01G168600 chr4B 86.253 822 97 6 18 838 458662709 458663515 0.000000e+00 878
11 TraesCS1B01G168600 chr4B 85.763 295 37 4 1000 1294 582827319 582827030 1.430000e-79 307
12 TraesCS1B01G168600 chr4A 85.765 843 98 11 1 838 91338892 91338067 0.000000e+00 872
13 TraesCS1B01G168600 chr4A 85.763 295 37 4 1000 1294 4818083 4818372 1.430000e-79 307
14 TraesCS1B01G168600 chr4A 91.406 128 11 0 2576 2703 4820648 4820775 4.210000e-40 176
15 TraesCS1B01G168600 chr3B 85.942 377 46 4 463 833 502647540 502647165 2.970000e-106 396
16 TraesCS1B01G168600 chr3A 86.290 248 31 1 465 709 508175185 508174938 2.430000e-67 267
17 TraesCS1B01G168600 chr3A 88.722 133 14 1 702 833 701239063 701239195 1.180000e-35 161
18 TraesCS1B01G168600 chr3A 87.591 137 11 3 703 834 508174612 508174477 1.970000e-33 154
19 TraesCS1B01G168600 chr4D 89.844 128 13 0 2576 2703 465759982 465759855 9.110000e-37 165
20 TraesCS1B01G168600 chr7B 92.135 89 7 0 3784 3872 233445372 233445284 4.300000e-25 126
21 TraesCS1B01G168600 chr2B 91.209 91 8 0 3783 3873 79676180 79676090 1.550000e-24 124
22 TraesCS1B01G168600 chr2B 87.000 100 7 2 3779 3873 26724665 26724763 1.560000e-19 108
23 TraesCS1B01G168600 chr3D 90.110 91 7 2 3784 3872 182423307 182423397 2.590000e-22 117
24 TraesCS1B01G168600 chr5D 89.362 94 5 1 3784 3872 34445610 34445517 3.350000e-21 113
25 TraesCS1B01G168600 chr5D 88.421 95 7 3 3783 3873 129166088 129166182 1.200000e-20 111
26 TraesCS1B01G168600 chr6B 89.011 91 8 2 3784 3872 503548006 503547916 1.200000e-20 111
27 TraesCS1B01G168600 chrUn 85.455 110 8 5 3783 3885 340869271 340869163 1.560000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G168600 chr1B 299437024 299441120 4096 False 7566.00 7566 100.00000 1 4097 1 chr1B.!!$F1 4096
1 TraesCS1B01G168600 chr1A 259049255 259052030 2775 False 1014.00 1784 91.91400 841 4089 3 chr1A.!!$F1 3248
2 TraesCS1B01G168600 chr1D 204023876 204028443 4567 False 813.75 1386 91.98525 819 3554 4 chr1D.!!$F3 2735
3 TraesCS1B01G168600 chr4B 458662709 458663515 806 False 878.00 878 86.25300 18 838 1 chr4B.!!$F1 820
4 TraesCS1B01G168600 chr4A 91338067 91338892 825 True 872.00 872 85.76500 1 838 1 chr4A.!!$R1 837
5 TraesCS1B01G168600 chr4A 4818083 4820775 2692 False 241.50 307 88.58450 1000 2703 2 chr4A.!!$F1 1703
6 TraesCS1B01G168600 chr3A 508174477 508175185 708 True 210.50 267 86.94050 465 834 2 chr3A.!!$R1 369

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
348 349 0.323629 TTCAAGACCTTAGGCACCCG 59.676 55.0 0.00 0.00 0.00 5.28 F
1331 1677 0.035056 CACTCCCAAGGCCCTTGTAG 60.035 60.0 21.65 19.15 39.58 2.74 F
1511 2727 0.263172 AGACATGACGAGGGAGGGAT 59.737 55.0 0.00 0.00 0.00 3.85 F
2435 6610 0.323302 TGCGGGTAGTGCATCTTTCA 59.677 50.0 0.00 0.00 37.44 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1761 4314 0.179045 ACTGTGCCAGACTGTTGTCC 60.179 55.0 8.91 0.0 43.91 4.02 R
2837 7016 0.310854 GGCAGGAACAACCGAACAAG 59.689 55.0 0.00 0.0 44.74 3.16 R
2838 7017 0.394488 TGGCAGGAACAACCGAACAA 60.394 50.0 0.00 0.0 44.74 2.83 R
3882 8224 0.037697 GTCCGGGCAAAATTTCACCC 60.038 55.0 15.50 15.5 39.12 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.672808 AGGCATTCTCTTCTTGAGTGTG 58.327 45.455 0.00 0.00 43.13 3.82
31 32 2.161211 GGCATTCTCTTCTTGAGTGTGC 59.839 50.000 12.66 12.66 44.82 4.57
75 76 2.787473 AGTTGATGGAGAATTGGCGA 57.213 45.000 0.00 0.00 0.00 5.54
93 94 2.097925 GCGAAACATTTGTGCGAAACAG 60.098 45.455 9.51 0.00 40.74 3.16
96 97 2.490328 ACATTTGTGCGAAACAGTGG 57.510 45.000 0.00 0.00 40.74 4.00
103 104 1.529865 GTGCGAAACAGTGGAACCTAC 59.470 52.381 0.00 0.00 37.80 3.18
139 140 2.227865 TGTTCTCGATGATCGACACACA 59.772 45.455 14.25 13.13 44.82 3.72
207 208 1.073284 GGTGGGCAAGGAGACAAGTTA 59.927 52.381 0.00 0.00 0.00 2.24
214 215 3.125316 GCAAGGAGACAAGTTATTCACGG 59.875 47.826 0.00 0.00 0.00 4.94
230 231 0.927767 ACGGGGAGATCTACCAGACT 59.072 55.000 28.78 6.27 34.34 3.24
231 232 1.288335 ACGGGGAGATCTACCAGACTT 59.712 52.381 28.78 5.52 34.34 3.01
238 239 2.691011 AGATCTACCAGACTTCTTCGGC 59.309 50.000 0.00 0.00 0.00 5.54
293 294 5.548056 AGAGTTTGAGATAGTTCCCCAGAAA 59.452 40.000 0.00 0.00 32.58 2.52
348 349 0.323629 TTCAAGACCTTAGGCACCCG 59.676 55.000 0.00 0.00 0.00 5.28
349 350 0.834687 TCAAGACCTTAGGCACCCGT 60.835 55.000 0.00 0.00 0.00 5.28
379 380 6.294787 GGATACACGGAGATTCATGTAGATGT 60.295 42.308 0.00 0.00 31.41 3.06
413 414 2.747855 GGCTTGGGAGGTTCTGCG 60.748 66.667 0.00 0.00 0.00 5.18
452 453 2.576615 GCAGACAGTCTTTTCTTGGGT 58.423 47.619 0.00 0.00 0.00 4.51
461 462 2.370849 TCTTTTCTTGGGTAGTTCGGCT 59.629 45.455 0.00 0.00 0.00 5.52
477 478 2.905736 TCGGCTATGATCATCCATGGAA 59.094 45.455 20.67 2.92 0.00 3.53
608 613 2.412089 GACATTGAGAAGGGAACGAACG 59.588 50.000 0.00 0.00 0.00 3.95
618 623 1.750778 GGGAACGAACGGTACCTATGA 59.249 52.381 10.90 0.00 0.00 2.15
644 649 5.008415 CACATTATCAAGGAGGTCAAGCATC 59.992 44.000 0.00 0.00 0.00 3.91
666 671 2.975851 GAGCGTCAAACTTCAATTGCAG 59.024 45.455 3.36 3.36 0.00 4.41
673 678 6.033196 CGTCAAACTTCAATTGCAGATTCATC 59.967 38.462 12.25 0.00 0.00 2.92
694 700 2.100631 CGAAGGCCGAGCAACGAAT 61.101 57.895 0.00 0.00 45.77 3.34
697 703 0.743345 AAGGCCGAGCAACGAATACC 60.743 55.000 0.00 1.93 45.77 2.73
699 705 2.522638 GCCGAGCAACGAATACCGG 61.523 63.158 0.00 0.00 45.77 5.28
700 706 1.881252 CCGAGCAACGAATACCGGG 60.881 63.158 6.32 0.00 45.77 5.73
737 1075 8.414629 AGCTAAAATTTTGAATTCTCTGGACT 57.585 30.769 13.76 0.00 0.00 3.85
758 1100 1.070615 GGGCGCCATGTTTGGTTTT 59.929 52.632 30.85 0.00 45.57 2.43
916 1261 3.181505 CCACGAGTGTACAGTCAGAGATC 60.182 52.174 26.29 2.83 0.00 2.75
918 1263 3.010420 CGAGTGTACAGTCAGAGATCCA 58.990 50.000 26.29 0.00 0.00 3.41
919 1264 3.181505 CGAGTGTACAGTCAGAGATCCAC 60.182 52.174 26.29 0.82 0.00 4.02
920 1265 4.013728 GAGTGTACAGTCAGAGATCCACT 58.986 47.826 23.12 0.00 34.82 4.00
921 1266 3.761218 AGTGTACAGTCAGAGATCCACTG 59.239 47.826 0.00 10.19 42.80 3.66
941 1286 2.836154 GTGCCTCACCTTCCCACA 59.164 61.111 0.00 0.00 0.00 4.17
1113 1458 3.819877 GACGGGGCTCACCAACGTT 62.820 63.158 0.00 0.00 46.80 3.99
1325 1671 4.048470 GTCCCACTCCCAAGGCCC 62.048 72.222 0.00 0.00 0.00 5.80
1327 1673 3.268032 CCCACTCCCAAGGCCCTT 61.268 66.667 0.00 0.00 0.00 3.95
1328 1674 2.036256 CCACTCCCAAGGCCCTTG 59.964 66.667 16.91 16.91 40.75 3.61
1329 1675 2.845345 CCACTCCCAAGGCCCTTGT 61.845 63.158 21.65 0.31 39.58 3.16
1330 1676 1.497309 CCACTCCCAAGGCCCTTGTA 61.497 60.000 21.65 8.94 39.58 2.41
1331 1677 0.035056 CACTCCCAAGGCCCTTGTAG 60.035 60.000 21.65 19.15 39.58 2.74
1337 1684 2.509964 CCCAAGGCCCTTGTAGTTATCT 59.490 50.000 21.65 0.00 39.58 1.98
1342 1689 2.633481 GGCCCTTGTAGTTATCTCCGAT 59.367 50.000 0.00 0.00 0.00 4.18
1371 1718 4.691359 ACTCGGTGTAGGGGGCGT 62.691 66.667 0.00 0.00 0.00 5.68
1400 2616 2.221169 TGCCAGCTACTTCAAACACTG 58.779 47.619 0.00 0.00 0.00 3.66
1401 2617 1.068954 GCCAGCTACTTCAAACACTGC 60.069 52.381 0.00 0.00 0.00 4.40
1424 2640 5.277779 GCCTATAGCGCATGATGTTGTAAAA 60.278 40.000 11.47 0.00 0.00 1.52
1432 2648 5.685068 CGCATGATGTTGTAAAACAAAGTGA 59.315 36.000 1.76 0.00 40.15 3.41
1435 2651 8.853345 GCATGATGTTGTAAAACAAAGTGATAG 58.147 33.333 1.76 0.00 40.15 2.08
1451 2667 5.419542 AGTGATAGCTTAAATGTCAGCGAA 58.580 37.500 0.00 0.00 41.24 4.70
1511 2727 0.263172 AGACATGACGAGGGAGGGAT 59.737 55.000 0.00 0.00 0.00 3.85
1527 2743 5.445964 GGAGGGATAGTTGCTAAAATTCCA 58.554 41.667 0.00 0.00 0.00 3.53
1554 2782 5.646606 TGTTTAACAAACAGCAACCTTCTC 58.353 37.500 0.00 0.00 45.79 2.87
1595 4133 6.727824 ATTTGTGTCAACTCTAATCTTCCG 57.272 37.500 0.00 0.00 0.00 4.30
1612 4150 8.842358 AATCTTCCGTTCTTTGTATAAACTCA 57.158 30.769 0.00 0.00 0.00 3.41
1613 4151 8.842358 ATCTTCCGTTCTTTGTATAAACTCAA 57.158 30.769 0.00 0.00 0.00 3.02
1614 4152 8.665643 TCTTCCGTTCTTTGTATAAACTCAAA 57.334 30.769 0.00 0.00 33.44 2.69
1635 4173 5.458041 AAACTCAAATGGGATGTTCTGTG 57.542 39.130 0.00 0.00 0.00 3.66
1638 4176 2.173519 CAAATGGGATGTTCTGTGCCT 58.826 47.619 0.00 0.00 0.00 4.75
1653 4191 5.539048 TCTGTGCCTAAGTTCTTACTCAAC 58.461 41.667 0.00 0.00 31.99 3.18
1710 4263 2.235898 ACTGATGCCTCTGTCTTTCCTC 59.764 50.000 0.00 0.00 0.00 3.71
1736 4289 5.930837 ATCTCTAGCTTCTGTACTTTGCT 57.069 39.130 0.00 1.71 37.72 3.91
1761 4314 5.163513 GTTGCACTTGATAATCCACTTTGG 58.836 41.667 0.00 0.00 39.43 3.28
1762 4315 3.763360 TGCACTTGATAATCCACTTTGGG 59.237 43.478 0.00 0.00 38.32 4.12
1763 4316 4.016444 GCACTTGATAATCCACTTTGGGA 58.984 43.478 0.00 0.00 42.21 4.37
1819 4373 5.446260 TGTCCAGAGTAGGTGTATCACTA 57.554 43.478 0.06 0.00 34.40 2.74
1825 4379 8.475639 TCCAGAGTAGGTGTATCACTATTTTTC 58.524 37.037 0.06 0.00 34.40 2.29
1854 4408 9.719355 TGTTTCTAATCACATCAGTTTAGCTTA 57.281 29.630 0.00 0.00 0.00 3.09
1891 4445 2.686558 CGGATGGCACATTATTTCCG 57.313 50.000 8.82 8.82 46.94 4.30
1896 4450 2.096248 TGGCACATTATTTCCGGGTTC 58.904 47.619 0.00 0.00 0.00 3.62
1917 4471 5.471556 TCCACATGTTTCATTGATGCTTT 57.528 34.783 0.00 0.00 0.00 3.51
1922 4476 5.012354 ACATGTTTCATTGATGCTTTCCCTT 59.988 36.000 0.00 0.00 0.00 3.95
2106 4679 6.576185 TGGAATGTAAGAAACCGACCTATAC 58.424 40.000 0.00 0.00 0.00 1.47
2108 4681 7.093201 TGGAATGTAAGAAACCGACCTATACTT 60.093 37.037 0.00 0.00 0.00 2.24
2110 4683 9.460906 GAATGTAAGAAACCGACCTATACTTAG 57.539 37.037 0.00 0.00 0.00 2.18
2119 4699 6.746120 ACCGACCTATACTTAGTTGCATTAG 58.254 40.000 0.00 0.00 0.00 1.73
2122 4702 7.381678 CCGACCTATACTTAGTTGCATTAGTTC 59.618 40.741 0.00 0.00 0.00 3.01
2126 4706 8.421784 CCTATACTTAGTTGCATTAGTTCCTGA 58.578 37.037 0.00 0.00 0.00 3.86
2129 4709 7.383102 ACTTAGTTGCATTAGTTCCTGATTG 57.617 36.000 0.00 0.00 0.00 2.67
2130 4710 4.708726 AGTTGCATTAGTTCCTGATTGC 57.291 40.909 0.00 0.00 0.00 3.56
2133 4713 5.587844 AGTTGCATTAGTTCCTGATTGCTAG 59.412 40.000 0.00 0.00 0.00 3.42
2134 4714 4.454678 TGCATTAGTTCCTGATTGCTAGG 58.545 43.478 0.00 0.00 36.63 3.02
2135 4715 3.251972 GCATTAGTTCCTGATTGCTAGGC 59.748 47.826 0.00 0.00 35.23 3.93
2136 4716 4.454678 CATTAGTTCCTGATTGCTAGGCA 58.545 43.478 0.00 0.00 35.23 4.75
2137 4717 4.778213 TTAGTTCCTGATTGCTAGGCAT 57.222 40.909 0.00 0.00 38.76 4.40
2138 4718 2.928334 AGTTCCTGATTGCTAGGCATG 58.072 47.619 0.00 0.00 38.76 4.06
2139 4719 2.507058 AGTTCCTGATTGCTAGGCATGA 59.493 45.455 0.00 0.00 38.76 3.07
2142 4722 2.773661 TCCTGATTGCTAGGCATGAGAA 59.226 45.455 0.00 0.00 38.76 2.87
2143 4723 3.200605 TCCTGATTGCTAGGCATGAGAAA 59.799 43.478 0.00 0.00 38.76 2.52
2144 4724 4.141321 TCCTGATTGCTAGGCATGAGAAAT 60.141 41.667 0.00 0.00 38.76 2.17
2147 5197 4.951715 TGATTGCTAGGCATGAGAAATGTT 59.048 37.500 0.00 0.00 38.76 2.71
2150 5200 7.286087 TGATTGCTAGGCATGAGAAATGTTTAT 59.714 33.333 0.00 0.00 38.76 1.40
2151 5201 7.408756 TTGCTAGGCATGAGAAATGTTTATT 57.591 32.000 0.00 0.00 38.76 1.40
2153 5203 6.602803 TGCTAGGCATGAGAAATGTTTATTGA 59.397 34.615 0.00 0.00 31.71 2.57
2155 5205 8.786898 GCTAGGCATGAGAAATGTTTATTGATA 58.213 33.333 0.00 0.00 0.00 2.15
2175 5225 9.816354 ATTGATAAAGTGTTACTTTGTTGCTTT 57.184 25.926 15.17 0.00 46.83 3.51
2177 5227 8.682710 TGATAAAGTGTTACTTTGTTGCTTTCT 58.317 29.630 15.17 0.00 46.83 2.52
2179 5229 6.509418 AAGTGTTACTTTGTTGCTTTCTCA 57.491 33.333 0.00 0.00 34.11 3.27
2180 5230 6.509418 AGTGTTACTTTGTTGCTTTCTCAA 57.491 33.333 0.00 0.00 0.00 3.02
2184 5234 8.162245 GTGTTACTTTGTTGCTTTCTCAAAAAG 58.838 33.333 0.00 0.00 34.33 2.27
2185 5235 7.330700 TGTTACTTTGTTGCTTTCTCAAAAAGG 59.669 33.333 0.00 0.00 33.52 3.11
2186 5236 6.036577 ACTTTGTTGCTTTCTCAAAAAGGA 57.963 33.333 0.00 0.00 33.52 3.36
2187 5237 6.101997 ACTTTGTTGCTTTCTCAAAAAGGAG 58.898 36.000 0.00 0.00 33.52 3.69
2188 5238 5.913137 TTGTTGCTTTCTCAAAAAGGAGA 57.087 34.783 0.24 0.00 41.99 3.71
2192 5242 3.316308 TGCTTTCTCAAAAAGGAGAGTGC 59.684 43.478 0.00 0.00 44.23 4.40
2193 5243 3.567585 GCTTTCTCAAAAAGGAGAGTGCT 59.432 43.478 0.00 0.00 44.23 4.40
2194 5244 4.757149 GCTTTCTCAAAAAGGAGAGTGCTA 59.243 41.667 0.00 0.00 44.23 3.49
2195 5245 5.334491 GCTTTCTCAAAAAGGAGAGTGCTAC 60.334 44.000 0.00 0.00 44.23 3.58
2204 5254 4.689612 AGGAGAGTGCTACTTTGTTGAA 57.310 40.909 0.00 0.00 27.89 2.69
2205 5255 5.234466 AGGAGAGTGCTACTTTGTTGAAT 57.766 39.130 0.00 0.00 27.89 2.57
2208 5478 6.016777 AGGAGAGTGCTACTTTGTTGAATTTG 60.017 38.462 0.00 0.00 27.89 2.32
2212 5482 5.043248 GTGCTACTTTGTTGAATTTGTGCT 58.957 37.500 0.00 0.00 0.00 4.40
2221 5491 5.599732 TGTTGAATTTGTGCTGTGCTTATT 58.400 33.333 0.00 0.00 0.00 1.40
2222 5492 5.462729 TGTTGAATTTGTGCTGTGCTTATTG 59.537 36.000 0.00 0.00 0.00 1.90
2223 5493 4.558178 TGAATTTGTGCTGTGCTTATTGG 58.442 39.130 0.00 0.00 0.00 3.16
2225 5495 3.641437 TTTGTGCTGTGCTTATTGGAC 57.359 42.857 0.00 0.00 37.53 4.02
2226 5496 1.533625 TGTGCTGTGCTTATTGGACC 58.466 50.000 0.00 0.00 36.06 4.46
2227 5497 0.811281 GTGCTGTGCTTATTGGACCC 59.189 55.000 0.00 0.00 36.06 4.46
2228 5498 0.403655 TGCTGTGCTTATTGGACCCA 59.596 50.000 0.00 0.00 36.06 4.51
2229 5499 1.005805 TGCTGTGCTTATTGGACCCAT 59.994 47.619 0.00 0.00 36.06 4.00
2230 5500 1.406539 GCTGTGCTTATTGGACCCATG 59.593 52.381 0.00 0.00 36.06 3.66
2231 5501 1.406539 CTGTGCTTATTGGACCCATGC 59.593 52.381 0.00 0.00 36.06 4.06
2233 5503 1.134946 GTGCTTATTGGACCCATGCAC 59.865 52.381 15.41 15.41 41.53 4.57
2234 5504 1.272369 TGCTTATTGGACCCATGCACA 60.272 47.619 0.00 0.00 0.00 4.57
2235 5505 1.134946 GCTTATTGGACCCATGCACAC 59.865 52.381 0.00 0.00 0.00 3.82
2236 5506 2.726821 CTTATTGGACCCATGCACACT 58.273 47.619 0.00 0.00 0.00 3.55
2237 5507 2.897271 TATTGGACCCATGCACACTT 57.103 45.000 0.00 0.00 0.00 3.16
2238 5508 2.014010 ATTGGACCCATGCACACTTT 57.986 45.000 0.00 0.00 0.00 2.66
2239 5509 1.786937 TTGGACCCATGCACACTTTT 58.213 45.000 0.00 0.00 0.00 2.27
2241 5511 1.039856 GGACCCATGCACACTTTTGT 58.960 50.000 0.00 0.00 35.84 2.83
2242 5512 1.412343 GGACCCATGCACACTTTTGTT 59.588 47.619 0.00 0.00 31.66 2.83
2243 5513 2.472816 GACCCATGCACACTTTTGTTG 58.527 47.619 0.00 0.00 31.66 3.33
2244 5514 1.219646 CCCATGCACACTTTTGTTGC 58.780 50.000 0.00 0.00 37.15 4.17
2245 5515 1.472904 CCCATGCACACTTTTGTTGCA 60.473 47.619 0.00 0.00 44.17 4.08
2246 5516 1.593933 CCATGCACACTTTTGTTGCAC 59.406 47.619 0.00 0.00 43.49 4.57
2247 5517 2.542597 CATGCACACTTTTGTTGCACT 58.457 42.857 0.00 0.00 43.49 4.40
2250 5520 3.397482 TGCACACTTTTGTTGCACTTTT 58.603 36.364 0.00 0.00 39.56 2.27
2251 5521 3.431572 TGCACACTTTTGTTGCACTTTTC 59.568 39.130 0.00 0.00 39.56 2.29
2262 6019 6.667981 TGTTGCACTTTTCGATTTATTTCG 57.332 33.333 0.00 0.00 40.46 3.46
2263 6020 6.202937 TGTTGCACTTTTCGATTTATTTCGT 58.797 32.000 0.00 0.00 40.03 3.85
2264 6021 6.141527 TGTTGCACTTTTCGATTTATTTCGTG 59.858 34.615 0.00 0.00 40.03 4.35
2266 6023 5.849081 TGCACTTTTCGATTTATTTCGTGTC 59.151 36.000 0.00 0.00 40.03 3.67
2267 6024 6.077838 GCACTTTTCGATTTATTTCGTGTCT 58.922 36.000 0.00 0.00 40.03 3.41
2268 6025 7.095565 TGCACTTTTCGATTTATTTCGTGTCTA 60.096 33.333 0.00 0.00 40.03 2.59
2269 6026 7.903431 GCACTTTTCGATTTATTTCGTGTCTAT 59.097 33.333 0.00 0.00 40.03 1.98
2284 6041 9.661563 TTTCGTGTCTATAAATAATGGTGTTCT 57.338 29.630 0.00 0.00 0.00 3.01
2286 6043 9.740239 TCGTGTCTATAAATAATGGTGTTCTAC 57.260 33.333 0.00 0.00 0.00 2.59
2296 6053 9.886132 AAATAATGGTGTTCTACTGTAACCTAG 57.114 33.333 7.66 0.00 0.00 3.02
2299 6056 7.735326 ATGGTGTTCTACTGTAACCTAGAAT 57.265 36.000 7.66 0.00 32.81 2.40
2300 6057 7.549147 TGGTGTTCTACTGTAACCTAGAATT 57.451 36.000 7.66 0.00 32.81 2.17
2301 6058 7.970102 TGGTGTTCTACTGTAACCTAGAATTT 58.030 34.615 7.66 0.00 32.81 1.82
2302 6059 8.092687 TGGTGTTCTACTGTAACCTAGAATTTC 58.907 37.037 7.66 0.00 32.81 2.17
2304 6061 9.141400 GTGTTCTACTGTAACCTAGAATTTCTG 57.859 37.037 9.22 0.00 32.81 3.02
2311 6479 9.708092 ACTGTAACCTAGAATTTCTGTTAGAAC 57.292 33.333 9.22 2.66 33.26 3.01
2344 6512 7.964559 TGATTTAGATTCTCTCATTTGTTTGCG 59.035 33.333 0.00 0.00 0.00 4.85
2346 6514 5.039480 AGATTCTCTCATTTGTTTGCGTG 57.961 39.130 0.00 0.00 0.00 5.34
2347 6515 4.756642 AGATTCTCTCATTTGTTTGCGTGA 59.243 37.500 0.00 0.00 0.00 4.35
2348 6516 4.891627 TTCTCTCATTTGTTTGCGTGAA 57.108 36.364 0.00 0.00 0.00 3.18
2349 6517 4.891627 TCTCTCATTTGTTTGCGTGAAA 57.108 36.364 0.00 0.00 0.00 2.69
2350 6518 5.242069 TCTCTCATTTGTTTGCGTGAAAA 57.758 34.783 0.00 0.00 0.00 2.29
2351 6519 5.645624 TCTCTCATTTGTTTGCGTGAAAAA 58.354 33.333 0.00 0.00 0.00 1.94
2375 6550 3.438087 CAGTTGTATTCCAAGCCTGTCTG 59.562 47.826 0.00 0.00 32.51 3.51
2377 6552 4.072131 GTTGTATTCCAAGCCTGTCTGAA 58.928 43.478 0.00 0.00 32.51 3.02
2383 6558 1.542915 CCAAGCCTGTCTGAAATGTGG 59.457 52.381 0.00 0.00 0.00 4.17
2384 6559 1.542915 CAAGCCTGTCTGAAATGTGGG 59.457 52.381 0.00 0.00 0.00 4.61
2387 6562 1.843368 CCTGTCTGAAATGTGGGCAT 58.157 50.000 0.00 0.00 36.80 4.40
2388 6563 1.747355 CCTGTCTGAAATGTGGGCATC 59.253 52.381 0.00 0.00 33.50 3.91
2392 6567 2.941720 GTCTGAAATGTGGGCATCTCTC 59.058 50.000 0.00 0.00 33.50 3.20
2396 6571 4.346730 TGAAATGTGGGCATCTCTCAATT 58.653 39.130 0.00 0.00 33.50 2.32
2398 6573 3.947612 ATGTGGGCATCTCTCAATTCT 57.052 42.857 0.00 0.00 0.00 2.40
2399 6574 3.726557 TGTGGGCATCTCTCAATTCTT 57.273 42.857 0.00 0.00 0.00 2.52
2400 6575 3.614092 TGTGGGCATCTCTCAATTCTTC 58.386 45.455 0.00 0.00 0.00 2.87
2402 6577 4.263639 TGTGGGCATCTCTCAATTCTTCTT 60.264 41.667 0.00 0.00 0.00 2.52
2403 6578 4.335037 GTGGGCATCTCTCAATTCTTCTTC 59.665 45.833 0.00 0.00 0.00 2.87
2405 6580 5.192176 GGGCATCTCTCAATTCTTCTTCTT 58.808 41.667 0.00 0.00 0.00 2.52
2406 6581 5.296531 GGGCATCTCTCAATTCTTCTTCTTC 59.703 44.000 0.00 0.00 0.00 2.87
2407 6582 6.114767 GGCATCTCTCAATTCTTCTTCTTCT 58.885 40.000 0.00 0.00 0.00 2.85
2408 6583 6.598850 GGCATCTCTCAATTCTTCTTCTTCTT 59.401 38.462 0.00 0.00 0.00 2.52
2410 6585 8.513774 GCATCTCTCAATTCTTCTTCTTCTTTT 58.486 33.333 0.00 0.00 0.00 2.27
2431 6606 1.904287 TTTTTGCGGGTAGTGCATCT 58.096 45.000 0.00 0.00 42.84 2.90
2432 6607 1.904287 TTTTGCGGGTAGTGCATCTT 58.096 45.000 0.00 0.00 42.84 2.40
2433 6608 1.904287 TTTGCGGGTAGTGCATCTTT 58.096 45.000 0.00 0.00 42.84 2.52
2434 6609 1.448985 TTGCGGGTAGTGCATCTTTC 58.551 50.000 0.00 0.00 42.84 2.62
2435 6610 0.323302 TGCGGGTAGTGCATCTTTCA 59.677 50.000 0.00 0.00 37.44 2.69
2436 6611 1.271108 TGCGGGTAGTGCATCTTTCAA 60.271 47.619 0.00 0.00 37.44 2.69
2437 6612 2.017049 GCGGGTAGTGCATCTTTCAAT 58.983 47.619 0.00 0.00 0.00 2.57
2438 6613 2.423538 GCGGGTAGTGCATCTTTCAATT 59.576 45.455 0.00 0.00 0.00 2.32
2439 6614 3.487544 GCGGGTAGTGCATCTTTCAATTC 60.488 47.826 0.00 0.00 0.00 2.17
2440 6615 3.941483 CGGGTAGTGCATCTTTCAATTCT 59.059 43.478 0.00 0.00 0.00 2.40
2441 6616 5.116180 CGGGTAGTGCATCTTTCAATTCTA 58.884 41.667 0.00 0.00 0.00 2.10
2442 6617 5.584649 CGGGTAGTGCATCTTTCAATTCTAA 59.415 40.000 0.00 0.00 0.00 2.10
2443 6618 6.238211 CGGGTAGTGCATCTTTCAATTCTAAG 60.238 42.308 0.00 0.00 0.00 2.18
2444 6619 6.038714 GGGTAGTGCATCTTTCAATTCTAAGG 59.961 42.308 0.00 0.00 0.00 2.69
2445 6620 6.823689 GGTAGTGCATCTTTCAATTCTAAGGA 59.176 38.462 0.00 0.00 0.00 3.36
2446 6621 7.500559 GGTAGTGCATCTTTCAATTCTAAGGAT 59.499 37.037 0.00 0.00 0.00 3.24
2447 6622 7.330900 AGTGCATCTTTCAATTCTAAGGATG 57.669 36.000 13.72 13.72 41.11 3.51
2448 6623 6.888632 AGTGCATCTTTCAATTCTAAGGATGT 59.111 34.615 16.94 3.00 40.59 3.06
2449 6624 8.049117 AGTGCATCTTTCAATTCTAAGGATGTA 58.951 33.333 16.94 12.74 40.59 2.29
2450 6625 8.844244 GTGCATCTTTCAATTCTAAGGATGTAT 58.156 33.333 16.94 0.00 40.59 2.29
2451 6626 9.412460 TGCATCTTTCAATTCTAAGGATGTATT 57.588 29.630 16.94 0.00 40.59 1.89
2522 6697 4.751060 TGGAGATTGCAAAATTGATCTGC 58.249 39.130 1.71 6.64 36.60 4.26
2536 6714 8.443953 AAATTGATCTGCCTGTCTTATTACTC 57.556 34.615 0.00 0.00 0.00 2.59
2766 6944 4.637483 TGCTTAGTTTGCATTCATAGGC 57.363 40.909 0.00 0.00 35.31 3.93
2802 6981 4.339814 TGCCTTCTGTACGGAAAATTTTGT 59.660 37.500 17.63 3.67 0.00 2.83
2803 6982 5.163499 TGCCTTCTGTACGGAAAATTTTGTT 60.163 36.000 17.63 0.00 0.00 2.83
2826 7005 8.046708 TGTTACATAATGATGAGTTTACCTGCT 58.953 33.333 0.00 0.00 36.48 4.24
2828 7007 7.325660 ACATAATGATGAGTTTACCTGCTTG 57.674 36.000 0.00 0.00 36.48 4.01
2829 7008 7.112122 ACATAATGATGAGTTTACCTGCTTGA 58.888 34.615 0.00 0.00 36.48 3.02
2831 7010 6.506500 AATGATGAGTTTACCTGCTTGAAG 57.493 37.500 0.00 0.00 0.00 3.02
2832 7011 4.973168 TGATGAGTTTACCTGCTTGAAGT 58.027 39.130 0.00 0.00 0.00 3.01
2833 7012 4.756642 TGATGAGTTTACCTGCTTGAAGTG 59.243 41.667 0.00 0.00 0.00 3.16
2834 7013 4.415881 TGAGTTTACCTGCTTGAAGTGA 57.584 40.909 0.00 0.00 0.00 3.41
2835 7014 4.973168 TGAGTTTACCTGCTTGAAGTGAT 58.027 39.130 0.00 0.00 0.00 3.06
2836 7015 4.756642 TGAGTTTACCTGCTTGAAGTGATG 59.243 41.667 0.00 0.00 0.00 3.07
2837 7016 3.503748 AGTTTACCTGCTTGAAGTGATGC 59.496 43.478 0.00 0.00 0.00 3.91
2838 7017 3.423539 TTACCTGCTTGAAGTGATGCT 57.576 42.857 0.00 0.00 0.00 3.79
2839 7018 2.283145 ACCTGCTTGAAGTGATGCTT 57.717 45.000 0.00 0.00 40.76 3.91
2840 7019 1.884579 ACCTGCTTGAAGTGATGCTTG 59.115 47.619 0.00 0.00 37.59 4.01
2841 7020 1.884579 CCTGCTTGAAGTGATGCTTGT 59.115 47.619 0.00 0.00 37.59 3.16
2842 7021 2.295349 CCTGCTTGAAGTGATGCTTGTT 59.705 45.455 0.00 0.00 37.59 2.83
2843 7022 3.562505 CTGCTTGAAGTGATGCTTGTTC 58.437 45.455 0.00 0.00 37.59 3.18
2844 7023 2.031769 TGCTTGAAGTGATGCTTGTTCG 60.032 45.455 0.00 0.00 37.59 3.95
2845 7024 2.666619 GCTTGAAGTGATGCTTGTTCGG 60.667 50.000 0.00 0.00 37.59 4.30
2846 7025 2.254546 TGAAGTGATGCTTGTTCGGT 57.745 45.000 0.00 0.00 37.59 4.69
2881 7060 9.212641 CCAGTGATCCATTAGTAAATATGACTG 57.787 37.037 11.64 11.64 30.88 3.51
2888 7067 6.992123 CCATTAGTAAATATGACTGCCAGTGA 59.008 38.462 0.00 0.00 0.00 3.41
2889 7068 7.663081 CCATTAGTAAATATGACTGCCAGTGAT 59.337 37.037 0.00 0.86 0.00 3.06
2890 7069 8.715998 CATTAGTAAATATGACTGCCAGTGATC 58.284 37.037 0.00 0.00 0.00 2.92
2891 7070 5.615289 AGTAAATATGACTGCCAGTGATCC 58.385 41.667 0.00 0.00 0.00 3.36
2892 7071 4.508551 AAATATGACTGCCAGTGATCCA 57.491 40.909 0.00 0.00 0.00 3.41
2894 7073 4.719026 ATATGACTGCCAGTGATCCATT 57.281 40.909 0.00 0.00 0.00 3.16
2895 7074 2.408271 TGACTGCCAGTGATCCATTC 57.592 50.000 0.00 0.00 0.00 2.67
2896 7075 1.629861 TGACTGCCAGTGATCCATTCA 59.370 47.619 0.00 0.00 0.00 2.57
2897 7076 2.240414 TGACTGCCAGTGATCCATTCAT 59.760 45.455 0.00 0.00 36.54 2.57
2898 7077 3.455543 TGACTGCCAGTGATCCATTCATA 59.544 43.478 0.00 0.00 36.54 2.15
2899 7078 4.063689 GACTGCCAGTGATCCATTCATAG 58.936 47.826 0.00 0.00 36.54 2.23
2900 7079 3.713248 ACTGCCAGTGATCCATTCATAGA 59.287 43.478 0.00 0.00 36.54 1.98
2901 7080 4.350225 ACTGCCAGTGATCCATTCATAGAT 59.650 41.667 0.00 0.00 36.54 1.98
2902 7081 5.545335 ACTGCCAGTGATCCATTCATAGATA 59.455 40.000 0.00 0.00 36.54 1.98
2905 7084 6.882678 TGCCAGTGATCCATTCATAGATATTG 59.117 38.462 0.00 0.00 36.54 1.90
2906 7085 6.318144 GCCAGTGATCCATTCATAGATATTGG 59.682 42.308 0.00 0.00 36.54 3.16
2907 7086 7.627311 CCAGTGATCCATTCATAGATATTGGA 58.373 38.462 0.00 0.00 40.54 3.53
2908 7087 7.769507 CCAGTGATCCATTCATAGATATTGGAG 59.230 40.741 0.00 0.00 39.68 3.86
3034 7228 6.458210 AGCAAGCAGTTAAGCATACAATTTT 58.542 32.000 0.00 0.00 36.85 1.82
3035 7229 6.366877 AGCAAGCAGTTAAGCATACAATTTTG 59.633 34.615 0.00 0.00 36.85 2.44
3166 7360 5.616270 TGTGTGTTGCCTGATTCTACTTTA 58.384 37.500 0.00 0.00 0.00 1.85
3283 7478 6.321717 TGTGGTTTAAATCATCATTCTTCGC 58.678 36.000 4.09 0.00 0.00 4.70
3288 7483 7.414540 GGTTTAAATCATCATTCTTCGCTCTGT 60.415 37.037 0.00 0.00 0.00 3.41
3290 7485 8.716646 TTAAATCATCATTCTTCGCTCTGTTA 57.283 30.769 0.00 0.00 0.00 2.41
3360 7637 8.925700 GTGCTGAAATAAAAATGTTTTCCCTAG 58.074 33.333 0.00 0.00 0.00 3.02
3461 7758 3.071874 AGTCATGGCTTTCGGAATTGA 57.928 42.857 0.00 0.00 0.00 2.57
3486 7783 3.455910 TGGGGAGGTAGAAGATGATGTTG 59.544 47.826 0.00 0.00 0.00 3.33
3519 7816 7.233144 TGGGAACAAATTTCAGATGAAAGATCA 59.767 33.333 13.02 2.12 41.81 2.92
3543 7840 2.436417 TCCATGCTGCTGTTAGAAACC 58.564 47.619 0.00 0.00 0.00 3.27
3544 7841 2.161855 CCATGCTGCTGTTAGAAACCA 58.838 47.619 0.00 0.00 0.00 3.67
3548 7845 2.040278 TGCTGCTGTTAGAAACCATCCT 59.960 45.455 0.00 0.00 0.00 3.24
3554 7851 4.563580 GCTGTTAGAAACCATCCTGACTGA 60.564 45.833 0.00 0.00 0.00 3.41
3555 7852 5.152623 TGTTAGAAACCATCCTGACTGAG 57.847 43.478 0.00 0.00 0.00 3.35
3556 7853 2.777832 AGAAACCATCCTGACTGAGC 57.222 50.000 0.00 0.00 0.00 4.26
3557 7854 1.280421 AGAAACCATCCTGACTGAGCC 59.720 52.381 0.00 0.00 0.00 4.70
3584 7882 4.722526 TCTTTCAAAGAAGGATGGGACA 57.277 40.909 0.00 0.00 37.39 4.02
3606 7904 0.539051 CCTACAGGGTTGGCTCTCAG 59.461 60.000 0.00 0.00 0.00 3.35
3608 7906 1.553690 TACAGGGTTGGCTCTCAGGC 61.554 60.000 0.00 0.00 41.77 4.85
3615 7913 2.588314 GGCTCTCAGGCGCATCTG 60.588 66.667 10.83 8.74 36.17 2.90
3621 7919 4.172512 CAGGCGCATCTGCTCCCT 62.173 66.667 10.83 6.52 46.59 4.20
3622 7920 3.406200 AGGCGCATCTGCTCCCTT 61.406 61.111 10.83 0.00 46.59 3.95
3634 7934 1.771854 TGCTCCCTTGGTGAACAGTAA 59.228 47.619 0.00 0.00 0.00 2.24
3636 7936 2.814336 GCTCCCTTGGTGAACAGTAAAG 59.186 50.000 0.00 0.00 0.00 1.85
3641 7941 4.642885 CCCTTGGTGAACAGTAAAGTCAAA 59.357 41.667 0.00 0.00 0.00 2.69
3642 7942 5.126384 CCCTTGGTGAACAGTAAAGTCAAAA 59.874 40.000 0.00 0.00 0.00 2.44
3643 7943 6.033966 CCTTGGTGAACAGTAAAGTCAAAAC 58.966 40.000 0.00 0.00 0.00 2.43
3644 7944 6.349777 CCTTGGTGAACAGTAAAGTCAAAACA 60.350 38.462 0.00 0.00 0.00 2.83
3645 7945 6.576662 TGGTGAACAGTAAAGTCAAAACAA 57.423 33.333 0.00 0.00 0.00 2.83
3646 7946 6.982852 TGGTGAACAGTAAAGTCAAAACAAA 58.017 32.000 0.00 0.00 0.00 2.83
3647 7947 7.434492 TGGTGAACAGTAAAGTCAAAACAAAA 58.566 30.769 0.00 0.00 0.00 2.44
3648 7948 8.091449 TGGTGAACAGTAAAGTCAAAACAAAAT 58.909 29.630 0.00 0.00 0.00 1.82
3649 7949 9.575783 GGTGAACAGTAAAGTCAAAACAAAATA 57.424 29.630 0.00 0.00 0.00 1.40
3685 7996 3.837213 AACTTGCATGGAAGATGTTCG 57.163 42.857 30.84 6.28 32.92 3.95
3690 8001 1.667724 GCATGGAAGATGTTCGAGTGG 59.332 52.381 0.00 0.00 32.92 4.00
3691 8002 2.677902 GCATGGAAGATGTTCGAGTGGA 60.678 50.000 0.00 0.00 32.92 4.02
3695 8006 3.452264 TGGAAGATGTTCGAGTGGATGAT 59.548 43.478 0.00 0.00 32.92 2.45
3696 8007 3.806521 GGAAGATGTTCGAGTGGATGATG 59.193 47.826 0.00 0.00 32.92 3.07
3697 8008 4.442052 GGAAGATGTTCGAGTGGATGATGA 60.442 45.833 0.00 0.00 32.92 2.92
3699 8010 2.672961 TGTTCGAGTGGATGATGACC 57.327 50.000 0.00 0.00 0.00 4.02
3701 8012 2.567169 TGTTCGAGTGGATGATGACCTT 59.433 45.455 0.00 0.00 0.00 3.50
3702 8013 3.190874 GTTCGAGTGGATGATGACCTTC 58.809 50.000 0.00 0.00 0.00 3.46
3703 8014 2.739943 TCGAGTGGATGATGACCTTCT 58.260 47.619 0.00 0.00 0.00 2.85
3704 8015 2.690497 TCGAGTGGATGATGACCTTCTC 59.310 50.000 0.00 0.00 0.00 2.87
3707 8018 4.621510 CGAGTGGATGATGACCTTCTCAAA 60.622 45.833 0.00 0.00 33.06 2.69
3711 8022 4.877823 TGGATGATGACCTTCTCAAATTCG 59.122 41.667 0.00 0.00 30.60 3.34
3712 8023 4.274459 GGATGATGACCTTCTCAAATTCGG 59.726 45.833 0.00 0.00 30.60 4.30
3713 8024 4.551702 TGATGACCTTCTCAAATTCGGA 57.448 40.909 0.00 0.00 30.60 4.55
3714 8025 5.102953 TGATGACCTTCTCAAATTCGGAT 57.897 39.130 0.00 0.00 30.60 4.18
3715 8026 5.118990 TGATGACCTTCTCAAATTCGGATC 58.881 41.667 0.00 0.00 30.60 3.36
3716 8027 4.826274 TGACCTTCTCAAATTCGGATCT 57.174 40.909 0.00 0.00 0.00 2.75
3718 8029 5.661458 TGACCTTCTCAAATTCGGATCTAC 58.339 41.667 0.00 0.00 0.00 2.59
3730 8071 7.752557 AATTCGGATCTACGAGAAAGTTTAC 57.247 36.000 0.00 0.00 44.47 2.01
3732 8073 7.615582 TTCGGATCTACGAGAAAGTTTACTA 57.384 36.000 0.00 0.00 44.47 1.82
3736 8077 9.941664 CGGATCTACGAGAAAGTTTACTATTTA 57.058 33.333 0.00 0.00 35.47 1.40
3745 8087 9.974750 GAGAAAGTTTACTATTTATGCACTGTC 57.025 33.333 0.00 0.00 0.00 3.51
3746 8088 9.726438 AGAAAGTTTACTATTTATGCACTGTCT 57.274 29.630 0.00 0.00 0.00 3.41
3752 8094 5.833082 ACTATTTATGCACTGTCTAGACCG 58.167 41.667 20.11 16.08 0.00 4.79
3780 8122 3.706055 TTTTTGCCACGAGCTCTCT 57.294 47.368 12.85 0.00 44.23 3.10
3781 8123 1.512926 TTTTTGCCACGAGCTCTCTC 58.487 50.000 12.85 0.00 44.23 3.20
3782 8124 0.392706 TTTTGCCACGAGCTCTCTCA 59.607 50.000 12.85 1.53 44.23 3.27
3783 8125 0.610174 TTTGCCACGAGCTCTCTCAT 59.390 50.000 12.85 0.00 44.23 2.90
3784 8126 1.474330 TTGCCACGAGCTCTCTCATA 58.526 50.000 12.85 0.00 44.23 2.15
3785 8127 0.741326 TGCCACGAGCTCTCTCATAC 59.259 55.000 12.85 0.00 44.23 2.39
3786 8128 1.028905 GCCACGAGCTCTCTCATACT 58.971 55.000 12.85 0.00 39.30 2.12
3787 8129 1.268999 GCCACGAGCTCTCTCATACTG 60.269 57.143 12.85 0.00 39.30 2.74
3788 8130 1.268999 CCACGAGCTCTCTCATACTGC 60.269 57.143 12.85 0.00 39.30 4.40
3789 8131 1.028905 ACGAGCTCTCTCATACTGCC 58.971 55.000 12.85 0.00 39.30 4.85
3790 8132 1.317613 CGAGCTCTCTCATACTGCCT 58.682 55.000 12.85 0.00 39.30 4.75
3791 8133 1.680735 CGAGCTCTCTCATACTGCCTT 59.319 52.381 12.85 0.00 39.30 4.35
3792 8134 2.287547 CGAGCTCTCTCATACTGCCTTC 60.288 54.545 12.85 0.00 39.30 3.46
3793 8135 2.692557 GAGCTCTCTCATACTGCCTTCA 59.307 50.000 6.43 0.00 39.16 3.02
3794 8136 3.307506 AGCTCTCTCATACTGCCTTCAT 58.692 45.455 0.00 0.00 0.00 2.57
3795 8137 3.321682 AGCTCTCTCATACTGCCTTCATC 59.678 47.826 0.00 0.00 0.00 2.92
3796 8138 3.554752 GCTCTCTCATACTGCCTTCATCC 60.555 52.174 0.00 0.00 0.00 3.51
3797 8139 2.968574 TCTCTCATACTGCCTTCATCCC 59.031 50.000 0.00 0.00 0.00 3.85
3798 8140 2.702478 CTCTCATACTGCCTTCATCCCA 59.298 50.000 0.00 0.00 0.00 4.37
3799 8141 3.114606 TCTCATACTGCCTTCATCCCAA 58.885 45.455 0.00 0.00 0.00 4.12
3800 8142 3.523157 TCTCATACTGCCTTCATCCCAAA 59.477 43.478 0.00 0.00 0.00 3.28
3801 8143 4.018506 TCTCATACTGCCTTCATCCCAAAA 60.019 41.667 0.00 0.00 0.00 2.44
3802 8144 4.870636 TCATACTGCCTTCATCCCAAAAT 58.129 39.130 0.00 0.00 0.00 1.82
3803 8145 5.271598 TCATACTGCCTTCATCCCAAAATT 58.728 37.500 0.00 0.00 0.00 1.82
3804 8146 5.360714 TCATACTGCCTTCATCCCAAAATTC 59.639 40.000 0.00 0.00 0.00 2.17
3805 8147 3.782992 ACTGCCTTCATCCCAAAATTCT 58.217 40.909 0.00 0.00 0.00 2.40
3806 8148 4.162651 ACTGCCTTCATCCCAAAATTCTT 58.837 39.130 0.00 0.00 0.00 2.52
3807 8149 4.020839 ACTGCCTTCATCCCAAAATTCTTG 60.021 41.667 0.00 0.00 0.00 3.02
3808 8150 3.903090 TGCCTTCATCCCAAAATTCTTGT 59.097 39.130 0.00 0.00 0.00 3.16
3809 8151 4.021192 TGCCTTCATCCCAAAATTCTTGTC 60.021 41.667 0.00 0.00 0.00 3.18
3810 8152 4.221482 GCCTTCATCCCAAAATTCTTGTCT 59.779 41.667 0.00 0.00 0.00 3.41
3811 8153 5.279657 GCCTTCATCCCAAAATTCTTGTCTT 60.280 40.000 0.00 0.00 0.00 3.01
3812 8154 6.071391 GCCTTCATCCCAAAATTCTTGTCTTA 60.071 38.462 0.00 0.00 0.00 2.10
3813 8155 7.542025 CCTTCATCCCAAAATTCTTGTCTTAG 58.458 38.462 0.00 0.00 0.00 2.18
3814 8156 7.394359 CCTTCATCCCAAAATTCTTGTCTTAGA 59.606 37.037 0.00 0.00 0.00 2.10
3815 8157 8.884124 TTCATCCCAAAATTCTTGTCTTAGAT 57.116 30.769 0.00 0.00 0.00 1.98
3816 8158 8.884124 TCATCCCAAAATTCTTGTCTTAGATT 57.116 30.769 0.00 0.00 0.00 2.40
3817 8159 9.312904 TCATCCCAAAATTCTTGTCTTAGATTT 57.687 29.630 0.00 0.00 0.00 2.17
3818 8160 9.362539 CATCCCAAAATTCTTGTCTTAGATTTG 57.637 33.333 0.00 0.00 29.84 2.32
3819 8161 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
3820 8162 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3821 8163 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3863 8205 7.602517 ATCTAAGACAAGAATTTTGAGACGG 57.397 36.000 7.18 0.00 0.00 4.79
3864 8206 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
3865 8207 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
3866 8208 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
3867 8209 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
3868 8210 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
3869 8211 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
3870 8212 2.907042 AGAATTTTGAGACGGAGGGAGT 59.093 45.455 0.00 0.00 0.00 3.85
3876 8218 0.945813 GAGACGGAGGGAGTATGTCG 59.054 60.000 0.00 0.00 34.82 4.35
3882 8224 2.033049 CGGAGGGAGTATGTCGTAACAG 59.967 54.545 0.00 0.00 39.20 3.16
3893 8235 6.713450 AGTATGTCGTAACAGGGTGAAATTTT 59.287 34.615 0.00 0.00 39.20 1.82
3898 8240 0.678950 ACAGGGTGAAATTTTGCCCG 59.321 50.000 19.12 16.70 45.48 6.13
3899 8241 0.037419 CAGGGTGAAATTTTGCCCGG 60.037 55.000 19.12 16.37 45.48 5.73
3906 8248 2.230992 TGAAATTTTGCCCGGACATCAG 59.769 45.455 0.73 0.00 0.00 2.90
3912 8254 2.187946 CCCGGACATCAGGCACTC 59.812 66.667 0.73 0.00 34.60 3.51
3913 8255 2.659063 CCCGGACATCAGGCACTCA 61.659 63.158 0.73 0.00 34.60 3.41
3919 8261 2.421424 GGACATCAGGCACTCAAACATC 59.579 50.000 0.00 0.00 34.60 3.06
3922 8264 4.910195 ACATCAGGCACTCAAACATCTTA 58.090 39.130 0.00 0.00 34.60 2.10
3923 8265 5.503927 ACATCAGGCACTCAAACATCTTAT 58.496 37.500 0.00 0.00 34.60 1.73
3924 8266 5.948162 ACATCAGGCACTCAAACATCTTATT 59.052 36.000 0.00 0.00 34.60 1.40
3926 8268 6.258230 TCAGGCACTCAAACATCTTATTTG 57.742 37.500 0.00 0.00 34.60 2.32
4009 8381 4.000988 GCTGCACTTAAGTACCAAAGCTA 58.999 43.478 8.04 0.00 0.00 3.32
4010 8382 4.142881 GCTGCACTTAAGTACCAAAGCTAC 60.143 45.833 8.04 0.00 0.00 3.58
4011 8383 4.320870 TGCACTTAAGTACCAAAGCTACC 58.679 43.478 8.04 0.00 0.00 3.18
4012 8384 4.202377 TGCACTTAAGTACCAAAGCTACCA 60.202 41.667 8.04 0.00 0.00 3.25
4053 8425 7.934120 GTGAGGCCACTAATATTTAAGTCAGAT 59.066 37.037 5.01 0.00 40.10 2.90
4089 8461 8.841300 GTCCCTAATATTTTCATCAAGAAGACC 58.159 37.037 0.00 0.00 37.57 3.85
4090 8462 8.781951 TCCCTAATATTTTCATCAAGAAGACCT 58.218 33.333 0.00 0.00 37.57 3.85
4091 8463 8.844244 CCCTAATATTTTCATCAAGAAGACCTG 58.156 37.037 0.00 0.00 37.57 4.00
4092 8464 8.844244 CCTAATATTTTCATCAAGAAGACCTGG 58.156 37.037 0.00 0.00 37.57 4.45
4093 8465 9.401058 CTAATATTTTCATCAAGAAGACCTGGT 57.599 33.333 0.00 0.00 37.57 4.00
4094 8466 8.655935 AATATTTTCATCAAGAAGACCTGGTT 57.344 30.769 0.00 0.00 37.57 3.67
4095 8467 5.772825 TTTTCATCAAGAAGACCTGGTTG 57.227 39.130 0.00 0.00 37.57 3.77
4096 8468 4.437682 TTCATCAAGAAGACCTGGTTGT 57.562 40.909 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.340814 TCAAGAAGAGAATGCCTCCAC 57.659 47.619 0.00 0.00 42.97 4.02
16 17 2.935201 GCCATAGCACACTCAAGAAGAG 59.065 50.000 0.00 0.00 44.16 2.85
30 31 1.202177 CCAAACACATCGTGCCATAGC 60.202 52.381 0.00 0.00 36.98 2.97
31 32 1.401552 CCCAAACACATCGTGCCATAG 59.598 52.381 0.00 0.00 36.98 2.23
39 40 1.808411 ACTAGTGCCCAAACACATCG 58.192 50.000 0.00 0.00 43.23 3.84
41 42 3.222173 TCAACTAGTGCCCAAACACAT 57.778 42.857 0.00 0.00 43.23 3.21
75 76 3.119316 TCCACTGTTTCGCACAAATGTTT 60.119 39.130 0.00 0.00 33.87 2.83
93 94 1.298859 CGCCTTGCAGTAGGTTCCAC 61.299 60.000 6.32 0.00 37.63 4.02
96 97 1.009829 CATCGCCTTGCAGTAGGTTC 58.990 55.000 6.32 0.00 37.63 3.62
103 104 0.109597 GAACAACCATCGCCTTGCAG 60.110 55.000 0.00 0.00 0.00 4.41
139 140 5.533903 AGCTTGACAAAAGATTCATGTGAGT 59.466 36.000 0.00 0.00 0.00 3.41
176 177 0.178909 TTGCCCACCAAATCACCCAT 60.179 50.000 0.00 0.00 0.00 4.00
207 208 2.091278 TCTGGTAGATCTCCCCGTGAAT 60.091 50.000 0.00 0.00 0.00 2.57
214 215 3.316868 CGAAGAAGTCTGGTAGATCTCCC 59.683 52.174 0.00 0.00 0.00 4.30
230 231 2.787473 AATGATGAGTGGCCGAAGAA 57.213 45.000 0.00 0.00 0.00 2.52
231 232 2.027285 TGAAATGATGAGTGGCCGAAGA 60.027 45.455 0.00 0.00 0.00 2.87
238 239 9.512435 GAAATCTGTTTATGAAATGATGAGTGG 57.488 33.333 0.00 0.00 0.00 4.00
293 294 3.964909 CGTAGCTTGTTTCCTTGCTTTT 58.035 40.909 0.00 0.00 37.02 2.27
348 349 0.753262 ATCTCCGTGTATCCTGGCAC 59.247 55.000 0.00 0.00 0.00 5.01
349 350 1.412710 GAATCTCCGTGTATCCTGGCA 59.587 52.381 0.00 0.00 0.00 4.92
353 354 5.386060 TCTACATGAATCTCCGTGTATCCT 58.614 41.667 0.00 0.00 37.74 3.24
363 364 5.212532 AGGCTGACATCTACATGAATCTC 57.787 43.478 0.00 0.00 33.72 2.75
379 380 3.212682 CGGAGCGAGCTAGGCTGA 61.213 66.667 15.84 0.00 41.72 4.26
413 414 1.429423 GTTTCTGCATACGGCTGCC 59.571 57.895 9.11 9.11 45.15 4.85
431 432 1.532868 CCCAAGAAAAGACTGTCTGCG 59.467 52.381 11.71 0.00 0.00 5.18
437 438 3.746492 CCGAACTACCCAAGAAAAGACTG 59.254 47.826 0.00 0.00 0.00 3.51
438 439 3.806157 GCCGAACTACCCAAGAAAAGACT 60.806 47.826 0.00 0.00 0.00 3.24
452 453 4.081476 CCATGGATGATCATAGCCGAACTA 60.081 45.833 5.56 0.00 34.64 2.24
461 462 6.296836 CCTCCTTGATTCCATGGATGATCATA 60.297 42.308 23.68 15.62 43.19 2.15
477 478 2.042831 GCGCTGCAACCTCCTTGAT 61.043 57.895 0.00 0.00 30.42 2.57
608 613 7.506114 TCCTTGATAATGTGTTCATAGGTACC 58.494 38.462 2.73 2.73 33.49 3.34
618 623 4.702131 GCTTGACCTCCTTGATAATGTGTT 59.298 41.667 0.00 0.00 0.00 3.32
644 649 1.971962 GCAATTGAAGTTTGACGCTCG 59.028 47.619 10.34 0.00 0.00 5.03
649 654 7.088905 AGATGAATCTGCAATTGAAGTTTGAC 58.911 34.615 13.50 2.61 35.42 3.18
666 671 2.225068 TCGGCCTTCGAAGATGAATC 57.775 50.000 26.61 7.65 45.86 2.52
694 700 1.547223 GCTAGTCTATCTGCCCCGGTA 60.547 57.143 0.00 0.00 0.00 4.02
697 703 2.201921 TAGCTAGTCTATCTGCCCCG 57.798 55.000 0.00 0.00 0.00 5.73
699 705 7.499232 TCAAAATTTTAGCTAGTCTATCTGCCC 59.501 37.037 2.44 0.00 0.00 5.36
700 706 8.438676 TCAAAATTTTAGCTAGTCTATCTGCC 57.561 34.615 2.44 0.00 0.00 4.85
737 1075 2.044451 CCAAACATGGCGCCCCTA 60.044 61.111 26.77 5.45 0.00 3.53
778 1120 2.898920 AAGCCACATGGAGCCGGATG 62.899 60.000 5.05 1.59 37.39 3.51
783 1125 1.135721 GATCAAAAGCCACATGGAGCC 59.864 52.381 0.87 0.00 37.39 4.70
784 1126 1.820519 TGATCAAAAGCCACATGGAGC 59.179 47.619 0.87 0.00 37.39 4.70
787 1129 7.852971 ATTTTATTGATCAAAAGCCACATGG 57.147 32.000 13.09 0.00 38.53 3.66
847 1189 3.187022 CGAAACGACGGGGAAAGTTTTAT 59.813 43.478 0.00 0.00 37.00 1.40
848 1190 2.543430 CGAAACGACGGGGAAAGTTTTA 59.457 45.455 0.00 0.00 37.00 1.52
918 1263 3.537206 GAAGGTGAGGCACGGCAGT 62.537 63.158 0.00 0.00 34.83 4.40
919 1264 2.743928 GAAGGTGAGGCACGGCAG 60.744 66.667 0.00 0.00 34.83 4.85
920 1265 4.329545 GGAAGGTGAGGCACGGCA 62.330 66.667 0.00 0.00 34.83 5.69
968 1313 2.670934 CCGTCTGCCTGCTTTGCT 60.671 61.111 0.00 0.00 0.00 3.91
994 1339 1.070758 GCCGCTCTCCTCCATGATTTA 59.929 52.381 0.00 0.00 0.00 1.40
1325 1671 7.437748 AGATGGAAATCGGAGATAACTACAAG 58.562 38.462 0.00 0.00 45.12 3.16
1327 1673 6.294010 CGAGATGGAAATCGGAGATAACTACA 60.294 42.308 0.00 0.00 45.12 2.74
1328 1674 6.072618 TCGAGATGGAAATCGGAGATAACTAC 60.073 42.308 0.00 0.00 45.12 2.73
1329 1675 6.002082 TCGAGATGGAAATCGGAGATAACTA 58.998 40.000 0.00 0.00 45.12 2.24
1330 1676 4.827835 TCGAGATGGAAATCGGAGATAACT 59.172 41.667 0.00 0.00 45.12 2.24
1331 1677 5.122512 TCGAGATGGAAATCGGAGATAAC 57.877 43.478 0.00 0.00 45.12 1.89
1337 1684 3.438297 GAGTTCGAGATGGAAATCGGA 57.562 47.619 0.00 0.00 39.38 4.55
1342 1689 1.616865 ACACCGAGTTCGAGATGGAAA 59.383 47.619 2.59 0.00 43.02 3.13
1371 1718 0.824109 AGTAGCTGGCAGTAATCGCA 59.176 50.000 17.16 0.00 0.00 5.10
1400 2616 2.146342 ACAACATCATGCGCTATAGGC 58.854 47.619 9.73 4.19 37.64 3.93
1401 2617 5.922739 TTTACAACATCATGCGCTATAGG 57.077 39.130 9.73 0.00 0.00 2.57
1424 2640 6.402550 CGCTGACATTTAAGCTATCACTTTGT 60.403 38.462 0.00 0.00 37.27 2.83
1469 2685 5.672421 TCATTCAGATTCAGCAGAAGAGA 57.328 39.130 0.00 0.00 37.14 3.10
1554 2782 3.303351 AATACCAAAGAGCTGGATGGG 57.697 47.619 11.71 0.81 38.96 4.00
1608 4146 5.835280 AGAACATCCCATTTGAGTTTTGAGT 59.165 36.000 0.00 0.00 0.00 3.41
1609 4147 6.154445 CAGAACATCCCATTTGAGTTTTGAG 58.846 40.000 0.00 0.00 0.00 3.02
1610 4148 5.598005 ACAGAACATCCCATTTGAGTTTTGA 59.402 36.000 0.00 0.00 31.28 2.69
1611 4149 5.693104 CACAGAACATCCCATTTGAGTTTTG 59.307 40.000 0.00 0.00 32.53 2.44
1612 4150 5.739935 GCACAGAACATCCCATTTGAGTTTT 60.740 40.000 0.00 0.00 0.00 2.43
1613 4151 4.262164 GCACAGAACATCCCATTTGAGTTT 60.262 41.667 0.00 0.00 0.00 2.66
1614 4152 3.256631 GCACAGAACATCCCATTTGAGTT 59.743 43.478 0.00 0.00 0.00 3.01
1635 4173 6.921914 TCTACTGTTGAGTAAGAACTTAGGC 58.078 40.000 0.00 0.00 35.56 3.93
1710 4263 5.508200 AAGTACAGAAGCTAGAGATTCCG 57.492 43.478 3.97 0.00 41.02 4.30
1736 4289 6.215121 CAAAGTGGATTATCAAGTGCAACAA 58.785 36.000 0.00 0.00 41.43 2.83
1761 4314 0.179045 ACTGTGCCAGACTGTTGTCC 60.179 55.000 8.91 0.00 43.91 4.02
1762 4315 1.668419 AACTGTGCCAGACTGTTGTC 58.332 50.000 8.91 0.00 43.10 3.18
1763 4316 3.882131 AACTGTGCCAGACTGTTGT 57.118 47.368 8.91 0.00 43.10 3.32
1825 4379 9.334693 GCTAAACTGATGTGATTAGAAACAAAG 57.665 33.333 0.00 0.00 0.00 2.77
1828 4382 8.621532 AAGCTAAACTGATGTGATTAGAAACA 57.378 30.769 0.00 0.00 0.00 2.83
1891 4445 4.497300 CATCAATGAAACATGTGGAACCC 58.503 43.478 0.00 0.00 34.36 4.11
1896 4450 4.628333 GGAAAGCATCAATGAAACATGTGG 59.372 41.667 0.00 0.00 0.00 4.17
1917 4471 2.034053 GTGAAACATTTGTGCGAAGGGA 59.966 45.455 0.00 0.00 36.32 4.20
1922 4476 8.910666 CAATAATTAAGTGAAACATTTGTGCGA 58.089 29.630 0.00 0.00 41.43 5.10
1971 4529 8.807948 ACAAAGTTAGTCCATATTGTAGCATT 57.192 30.769 0.00 0.00 29.89 3.56
2106 4679 6.094603 AGCAATCAGGAACTAATGCAACTAAG 59.905 38.462 0.00 0.00 41.06 2.18
2108 4681 5.500234 AGCAATCAGGAACTAATGCAACTA 58.500 37.500 0.00 0.00 41.06 2.24
2110 4683 4.708726 AGCAATCAGGAACTAATGCAAC 57.291 40.909 0.00 0.00 41.06 4.17
2119 4699 2.877168 CTCATGCCTAGCAATCAGGAAC 59.123 50.000 0.00 0.00 43.62 3.62
2122 4702 2.924757 TCTCATGCCTAGCAATCAGG 57.075 50.000 0.00 0.00 43.62 3.86
2126 4706 5.927281 AAACATTTCTCATGCCTAGCAAT 57.073 34.783 0.00 0.00 43.62 3.56
2129 4709 7.031226 TCAATAAACATTTCTCATGCCTAGC 57.969 36.000 0.00 0.00 0.00 3.42
2133 4713 9.807649 ACTTTATCAATAAACATTTCTCATGCC 57.192 29.630 0.00 0.00 0.00 4.40
2150 5200 9.296400 GAAAGCAACAAAGTAACACTTTATCAA 57.704 29.630 4.10 0.00 45.84 2.57
2151 5201 8.682710 AGAAAGCAACAAAGTAACACTTTATCA 58.317 29.630 4.10 0.00 45.84 2.15
2153 5203 8.682710 TGAGAAAGCAACAAAGTAACACTTTAT 58.317 29.630 4.10 0.00 45.84 1.40
2156 5206 6.509418 TGAGAAAGCAACAAAGTAACACTT 57.491 33.333 0.00 0.00 40.80 3.16
2157 5207 6.509418 TTGAGAAAGCAACAAAGTAACACT 57.491 33.333 0.00 0.00 0.00 3.55
2158 5208 7.575332 TTTTGAGAAAGCAACAAAGTAACAC 57.425 32.000 0.00 0.00 35.48 3.32
2160 5210 7.544217 TCCTTTTTGAGAAAGCAACAAAGTAAC 59.456 33.333 0.00 0.00 35.48 2.50
2164 5214 6.332630 TCTCCTTTTTGAGAAAGCAACAAAG 58.667 36.000 0.00 0.00 38.41 2.77
2165 5215 6.071391 ACTCTCCTTTTTGAGAAAGCAACAAA 60.071 34.615 0.00 0.00 40.72 2.83
2166 5216 5.418840 ACTCTCCTTTTTGAGAAAGCAACAA 59.581 36.000 0.00 0.00 40.72 2.83
2171 5221 3.567585 AGCACTCTCCTTTTTGAGAAAGC 59.432 43.478 0.00 0.00 40.72 3.51
2175 5225 5.552870 AAGTAGCACTCTCCTTTTTGAGA 57.447 39.130 0.00 0.00 39.04 3.27
2177 5227 5.437060 ACAAAGTAGCACTCTCCTTTTTGA 58.563 37.500 0.00 0.00 0.00 2.69
2179 5229 5.885912 TCAACAAAGTAGCACTCTCCTTTTT 59.114 36.000 0.00 0.00 0.00 1.94
2180 5230 5.437060 TCAACAAAGTAGCACTCTCCTTTT 58.563 37.500 0.00 0.00 0.00 2.27
2184 5234 5.948992 AATTCAACAAAGTAGCACTCTCC 57.051 39.130 0.00 0.00 0.00 3.71
2185 5235 6.634436 CACAAATTCAACAAAGTAGCACTCTC 59.366 38.462 0.00 0.00 0.00 3.20
2186 5236 6.498304 CACAAATTCAACAAAGTAGCACTCT 58.502 36.000 0.00 0.00 0.00 3.24
2187 5237 5.173854 GCACAAATTCAACAAAGTAGCACTC 59.826 40.000 0.00 0.00 0.00 3.51
2188 5238 5.043248 GCACAAATTCAACAAAGTAGCACT 58.957 37.500 0.00 0.00 0.00 4.40
2192 5242 5.051508 GCACAGCACAAATTCAACAAAGTAG 60.052 40.000 0.00 0.00 0.00 2.57
2193 5243 4.803088 GCACAGCACAAATTCAACAAAGTA 59.197 37.500 0.00 0.00 0.00 2.24
2194 5244 3.618150 GCACAGCACAAATTCAACAAAGT 59.382 39.130 0.00 0.00 0.00 2.66
2195 5245 3.866910 AGCACAGCACAAATTCAACAAAG 59.133 39.130 0.00 0.00 0.00 2.77
2199 5249 5.107375 CCAATAAGCACAGCACAAATTCAAC 60.107 40.000 0.00 0.00 0.00 3.18
2200 5250 4.989797 CCAATAAGCACAGCACAAATTCAA 59.010 37.500 0.00 0.00 0.00 2.69
2201 5251 4.280425 TCCAATAAGCACAGCACAAATTCA 59.720 37.500 0.00 0.00 0.00 2.57
2202 5252 4.622740 GTCCAATAAGCACAGCACAAATTC 59.377 41.667 0.00 0.00 0.00 2.17
2204 5254 3.056607 GGTCCAATAAGCACAGCACAAAT 60.057 43.478 0.00 0.00 0.00 2.32
2205 5255 2.295909 GGTCCAATAAGCACAGCACAAA 59.704 45.455 0.00 0.00 0.00 2.83
2208 5478 0.811281 GGGTCCAATAAGCACAGCAC 59.189 55.000 0.00 0.00 0.00 4.40
2212 5482 1.272369 TGCATGGGTCCAATAAGCACA 60.272 47.619 0.00 0.00 0.00 4.57
2221 5491 1.039068 CAAAAGTGTGCATGGGTCCA 58.961 50.000 0.00 0.00 0.00 4.02
2222 5492 1.039856 ACAAAAGTGTGCATGGGTCC 58.960 50.000 0.00 0.00 36.31 4.46
2223 5493 2.472816 CAACAAAAGTGTGCATGGGTC 58.527 47.619 0.00 0.00 38.27 4.46
2225 5495 1.219646 GCAACAAAAGTGTGCATGGG 58.780 50.000 0.00 0.00 38.27 4.00
2226 5496 1.593933 GTGCAACAAAAGTGTGCATGG 59.406 47.619 0.38 0.00 40.99 3.66
2227 5497 2.542597 AGTGCAACAAAAGTGTGCATG 58.457 42.857 0.38 0.00 40.99 4.06
2228 5498 2.965572 AGTGCAACAAAAGTGTGCAT 57.034 40.000 0.38 0.00 40.99 3.96
2229 5499 2.739885 AAGTGCAACAAAAGTGTGCA 57.260 40.000 0.00 0.00 41.43 4.57
2230 5500 3.481789 CGAAAAGTGCAACAAAAGTGTGC 60.482 43.478 0.00 0.00 41.43 4.57
2231 5501 3.917380 TCGAAAAGTGCAACAAAAGTGTG 59.083 39.130 0.00 0.00 41.43 3.82
2233 5503 5.701029 AATCGAAAAGTGCAACAAAAGTG 57.299 34.783 0.00 0.00 41.43 3.16
2234 5504 8.419076 AATAAATCGAAAAGTGCAACAAAAGT 57.581 26.923 0.00 0.00 41.43 2.66
2235 5505 9.356929 GAAATAAATCGAAAAGTGCAACAAAAG 57.643 29.630 0.00 0.00 41.43 2.27
2236 5506 8.053072 CGAAATAAATCGAAAAGTGCAACAAAA 58.947 29.630 0.00 0.00 45.48 2.44
2237 5507 7.221067 ACGAAATAAATCGAAAAGTGCAACAAA 59.779 29.630 3.47 0.00 45.48 2.83
2238 5508 6.693545 ACGAAATAAATCGAAAAGTGCAACAA 59.306 30.769 3.47 0.00 45.48 2.83
2239 5509 6.141527 CACGAAATAAATCGAAAAGTGCAACA 59.858 34.615 3.47 0.00 45.48 3.33
2241 5511 6.202937 ACACGAAATAAATCGAAAAGTGCAA 58.797 32.000 3.47 0.00 45.48 4.08
2242 5512 5.753744 ACACGAAATAAATCGAAAAGTGCA 58.246 33.333 3.47 0.00 45.48 4.57
2243 5513 6.077838 AGACACGAAATAAATCGAAAAGTGC 58.922 36.000 3.47 0.00 45.48 4.40
2273 6030 8.654485 TTCTAGGTTACAGTAGAACACCATTA 57.346 34.615 2.61 0.00 31.66 1.90
2274 6031 7.549147 TTCTAGGTTACAGTAGAACACCATT 57.451 36.000 2.61 0.00 31.66 3.16
2275 6032 7.735326 ATTCTAGGTTACAGTAGAACACCAT 57.265 36.000 8.10 0.00 37.94 3.55
2276 6033 7.549147 AATTCTAGGTTACAGTAGAACACCA 57.451 36.000 8.10 0.00 37.94 4.17
2277 6034 8.312564 AGAAATTCTAGGTTACAGTAGAACACC 58.687 37.037 8.10 0.00 37.94 4.16
2278 6035 9.141400 CAGAAATTCTAGGTTACAGTAGAACAC 57.859 37.037 8.10 4.63 37.94 3.32
2279 6036 8.867097 ACAGAAATTCTAGGTTACAGTAGAACA 58.133 33.333 8.10 0.00 37.94 3.18
2280 6037 9.708092 AACAGAAATTCTAGGTTACAGTAGAAC 57.292 33.333 8.10 0.00 37.94 3.01
2285 6042 9.708092 GTTCTAACAGAAATTCTAGGTTACAGT 57.292 33.333 0.00 0.00 35.75 3.55
2286 6043 9.930693 AGTTCTAACAGAAATTCTAGGTTACAG 57.069 33.333 0.00 0.00 35.75 2.74
2348 6516 5.128663 ACAGGCTTGGAATACAACTGTTTTT 59.871 36.000 0.00 0.00 41.13 1.94
2349 6517 4.649218 ACAGGCTTGGAATACAACTGTTTT 59.351 37.500 0.00 0.00 41.13 2.43
2350 6518 4.215109 ACAGGCTTGGAATACAACTGTTT 58.785 39.130 0.00 0.00 41.13 2.83
2351 6519 3.821033 GACAGGCTTGGAATACAACTGTT 59.179 43.478 0.00 0.00 42.83 3.16
2352 6520 3.073062 AGACAGGCTTGGAATACAACTGT 59.927 43.478 0.00 1.61 44.41 3.55
2353 6521 3.438087 CAGACAGGCTTGGAATACAACTG 59.562 47.826 0.00 0.00 38.47 3.16
2354 6522 3.327757 TCAGACAGGCTTGGAATACAACT 59.672 43.478 0.00 0.00 34.76 3.16
2355 6523 3.674997 TCAGACAGGCTTGGAATACAAC 58.325 45.455 0.00 0.00 34.76 3.32
2356 6524 4.365514 TTCAGACAGGCTTGGAATACAA 57.634 40.909 0.00 0.00 37.55 2.41
2357 6525 4.365514 TTTCAGACAGGCTTGGAATACA 57.634 40.909 0.00 0.00 0.00 2.29
2358 6526 4.702131 ACATTTCAGACAGGCTTGGAATAC 59.298 41.667 0.00 0.00 0.00 1.89
2363 6538 1.542915 CCACATTTCAGACAGGCTTGG 59.457 52.381 0.00 0.00 0.00 3.61
2365 6540 1.915141 CCCACATTTCAGACAGGCTT 58.085 50.000 0.00 0.00 0.00 4.35
2367 6542 0.895100 TGCCCACATTTCAGACAGGC 60.895 55.000 0.00 0.00 39.41 4.85
2368 6543 1.747355 GATGCCCACATTTCAGACAGG 59.253 52.381 0.00 0.00 36.35 4.00
2369 6544 2.681848 GAGATGCCCACATTTCAGACAG 59.318 50.000 0.00 0.00 37.36 3.51
2375 6550 4.643784 AGAATTGAGAGATGCCCACATTTC 59.356 41.667 0.00 0.00 37.61 2.17
2377 6552 4.246712 AGAATTGAGAGATGCCCACATT 57.753 40.909 0.00 0.00 36.35 2.71
2383 6558 6.114767 AGAAGAAGAAGAATTGAGAGATGCC 58.885 40.000 0.00 0.00 0.00 4.40
2384 6559 7.614124 AAGAAGAAGAAGAATTGAGAGATGC 57.386 36.000 0.00 0.00 0.00 3.91
2415 6590 1.271108 TGAAAGATGCACTACCCGCAA 60.271 47.619 0.00 0.00 43.84 4.85
2416 6591 0.323302 TGAAAGATGCACTACCCGCA 59.677 50.000 0.00 0.00 44.94 5.69
2418 6593 3.941483 AGAATTGAAAGATGCACTACCCG 59.059 43.478 0.00 0.00 0.00 5.28
2419 6594 6.038714 CCTTAGAATTGAAAGATGCACTACCC 59.961 42.308 0.00 0.00 0.00 3.69
2420 6595 6.823689 TCCTTAGAATTGAAAGATGCACTACC 59.176 38.462 0.00 0.00 0.00 3.18
2421 6596 7.849804 TCCTTAGAATTGAAAGATGCACTAC 57.150 36.000 0.00 0.00 0.00 2.73
2422 6597 8.049117 ACATCCTTAGAATTGAAAGATGCACTA 58.951 33.333 0.00 0.00 0.00 2.74
2423 6598 6.888632 ACATCCTTAGAATTGAAAGATGCACT 59.111 34.615 0.00 0.00 0.00 4.40
2424 6599 7.093322 ACATCCTTAGAATTGAAAGATGCAC 57.907 36.000 0.00 0.00 0.00 4.57
2425 6600 8.985315 ATACATCCTTAGAATTGAAAGATGCA 57.015 30.769 0.00 0.00 0.00 3.96
2486 6661 9.639563 TTTGCAATCTCCATAATACTATTTGGA 57.360 29.630 0.00 10.10 36.81 3.53
2536 6714 9.674824 GCAATAAGACATGGAAAGATTATTGAG 57.325 33.333 19.43 5.78 40.51 3.02
2763 6941 3.106738 GCACCTGCTTCATATGCCT 57.893 52.632 0.00 0.00 38.21 4.75
2766 6944 2.617308 CAGAAGGCACCTGCTTCATATG 59.383 50.000 0.00 0.00 41.70 1.78
2777 6956 1.886886 TTTTCCGTACAGAAGGCACC 58.113 50.000 0.00 0.00 0.00 5.01
2802 6981 8.892723 CAAGCAGGTAAACTCATCATTATGTAA 58.107 33.333 0.00 0.00 34.50 2.41
2803 6982 8.264347 TCAAGCAGGTAAACTCATCATTATGTA 58.736 33.333 0.00 0.00 34.50 2.29
2815 6994 3.503748 GCATCACTTCAAGCAGGTAAACT 59.496 43.478 0.00 0.00 0.00 2.66
2821 7000 1.884579 ACAAGCATCACTTCAAGCAGG 59.115 47.619 0.00 0.00 36.04 4.85
2826 7005 2.571212 ACCGAACAAGCATCACTTCAA 58.429 42.857 0.00 0.00 36.04 2.69
2828 7007 2.290641 ACAACCGAACAAGCATCACTTC 59.709 45.455 0.00 0.00 36.04 3.01
2829 7008 2.297701 ACAACCGAACAAGCATCACTT 58.702 42.857 0.00 0.00 40.05 3.16
2831 7010 2.604614 GGAACAACCGAACAAGCATCAC 60.605 50.000 0.00 0.00 0.00 3.06
2832 7011 1.606668 GGAACAACCGAACAAGCATCA 59.393 47.619 0.00 0.00 0.00 3.07
2833 7012 1.880027 AGGAACAACCGAACAAGCATC 59.120 47.619 0.00 0.00 44.74 3.91
2834 7013 1.608590 CAGGAACAACCGAACAAGCAT 59.391 47.619 0.00 0.00 44.74 3.79
2835 7014 1.021202 CAGGAACAACCGAACAAGCA 58.979 50.000 0.00 0.00 44.74 3.91
2836 7015 0.317854 GCAGGAACAACCGAACAAGC 60.318 55.000 0.00 0.00 44.74 4.01
2837 7016 0.310854 GGCAGGAACAACCGAACAAG 59.689 55.000 0.00 0.00 44.74 3.16
2838 7017 0.394488 TGGCAGGAACAACCGAACAA 60.394 50.000 0.00 0.00 44.74 2.83
2839 7018 0.817634 CTGGCAGGAACAACCGAACA 60.818 55.000 6.61 0.00 44.74 3.18
2840 7019 0.818040 ACTGGCAGGAACAACCGAAC 60.818 55.000 20.34 0.00 44.74 3.95
2841 7020 0.817634 CACTGGCAGGAACAACCGAA 60.818 55.000 20.34 0.00 44.74 4.30
2842 7021 1.227823 CACTGGCAGGAACAACCGA 60.228 57.895 20.34 0.00 44.74 4.69
2843 7022 0.606401 ATCACTGGCAGGAACAACCG 60.606 55.000 20.34 0.00 44.74 4.44
2844 7023 1.168714 GATCACTGGCAGGAACAACC 58.831 55.000 20.34 0.00 39.35 3.77
2845 7024 1.168714 GGATCACTGGCAGGAACAAC 58.831 55.000 20.34 4.93 0.00 3.32
2846 7025 0.770499 TGGATCACTGGCAGGAACAA 59.230 50.000 20.34 3.00 0.00 2.83
2881 7060 6.318144 CCAATATCTATGAATGGATCACTGGC 59.682 42.308 0.00 0.00 41.93 4.85
2905 7084 8.569641 CCACACTCAATAACTATCTACTACTCC 58.430 40.741 0.00 0.00 0.00 3.85
2906 7085 9.339850 TCCACACTCAATAACTATCTACTACTC 57.660 37.037 0.00 0.00 0.00 2.59
2907 7086 9.344772 CTCCACACTCAATAACTATCTACTACT 57.655 37.037 0.00 0.00 0.00 2.57
2908 7087 8.569641 CCTCCACACTCAATAACTATCTACTAC 58.430 40.741 0.00 0.00 0.00 2.73
2980 7172 7.806690 TCAAATGAGCAAGTAGTGTGATAAAC 58.193 34.615 0.00 0.00 0.00 2.01
3034 7228 5.587443 CAGATCTCTGCATATGTGGAAAACA 59.413 40.000 4.29 0.00 39.16 2.83
3035 7229 5.819379 TCAGATCTCTGCATATGTGGAAAAC 59.181 40.000 4.29 0.00 43.46 2.43
3148 7342 6.092807 CCAAGTCTAAAGTAGAATCAGGCAAC 59.907 42.308 0.00 0.00 36.40 4.17
3261 7456 6.599244 AGAGCGAAGAATGATGATTTAAACCA 59.401 34.615 0.00 0.00 0.00 3.67
3267 7462 7.335422 ACTTAACAGAGCGAAGAATGATGATTT 59.665 33.333 0.00 0.00 0.00 2.17
3276 7471 9.817809 ATATAATTCACTTAACAGAGCGAAGAA 57.182 29.630 0.00 0.00 0.00 2.52
3322 7599 0.592637 TTCAGCACATCAAACCGCAG 59.407 50.000 0.00 0.00 0.00 5.18
3360 7637 9.883142 TGAAATATTCCACCAAATTACATTTCC 57.117 29.630 0.00 0.00 31.84 3.13
3368 7645 7.035004 CACACGATGAAATATTCCACCAAATT 58.965 34.615 0.00 0.00 0.00 1.82
3382 7659 1.606668 GTCAAAGGGCACACGATGAAA 59.393 47.619 0.00 0.00 0.00 2.69
3461 7758 4.728860 ACATCATCTTCTACCTCCCCAAAT 59.271 41.667 0.00 0.00 0.00 2.32
3519 7816 1.561076 TCTAACAGCAGCATGGATGGT 59.439 47.619 0.00 0.00 39.42 3.55
3595 7893 2.437359 ATGCGCCTGAGAGCCAAC 60.437 61.111 4.18 0.00 38.15 3.77
3615 7913 2.561478 TTACTGTTCACCAAGGGAGC 57.439 50.000 0.00 0.00 0.00 4.70
3621 7919 6.576662 TGTTTTGACTTTACTGTTCACCAA 57.423 33.333 0.00 0.00 0.00 3.67
3622 7920 6.576662 TTGTTTTGACTTTACTGTTCACCA 57.423 33.333 0.00 0.00 0.00 4.17
3685 7996 4.478206 TTGAGAAGGTCATCATCCACTC 57.522 45.455 0.00 0.00 34.17 3.51
3690 8001 5.118990 TCCGAATTTGAGAAGGTCATCATC 58.881 41.667 0.00 0.00 34.17 2.92
3691 8002 5.102953 TCCGAATTTGAGAAGGTCATCAT 57.897 39.130 0.00 0.00 34.17 2.45
3695 8006 4.826274 AGATCCGAATTTGAGAAGGTCA 57.174 40.909 0.00 0.00 0.00 4.02
3696 8007 4.740695 CGTAGATCCGAATTTGAGAAGGTC 59.259 45.833 0.00 0.00 0.00 3.85
3697 8008 4.401519 TCGTAGATCCGAATTTGAGAAGGT 59.598 41.667 0.00 0.00 33.15 3.50
3699 8010 5.822278 TCTCGTAGATCCGAATTTGAGAAG 58.178 41.667 0.00 0.00 36.24 2.85
3701 8012 5.830000 TTCTCGTAGATCCGAATTTGAGA 57.170 39.130 0.00 0.00 36.24 3.27
3702 8013 6.037098 ACTTTCTCGTAGATCCGAATTTGAG 58.963 40.000 0.00 0.00 36.24 3.02
3703 8014 5.962433 ACTTTCTCGTAGATCCGAATTTGA 58.038 37.500 0.00 0.00 36.24 2.69
3704 8015 6.648725 AACTTTCTCGTAGATCCGAATTTG 57.351 37.500 0.00 0.00 36.24 2.32
3707 8018 7.098074 AGTAAACTTTCTCGTAGATCCGAAT 57.902 36.000 0.00 0.00 36.24 3.34
3716 8027 9.865321 AGTGCATAAATAGTAAACTTTCTCGTA 57.135 29.630 0.00 0.00 0.00 3.43
3718 8029 8.656849 ACAGTGCATAAATAGTAAACTTTCTCG 58.343 33.333 0.00 0.00 0.00 4.04
3730 8071 6.073327 TCGGTCTAGACAGTGCATAAATAG 57.927 41.667 23.91 0.00 0.00 1.73
3732 8073 5.537300 ATCGGTCTAGACAGTGCATAAAT 57.463 39.130 23.91 5.39 0.00 1.40
3736 8077 3.895232 AAATCGGTCTAGACAGTGCAT 57.105 42.857 23.91 7.45 0.00 3.96
3737 8078 3.006430 TCAAAATCGGTCTAGACAGTGCA 59.994 43.478 23.91 5.34 0.00 4.57
3775 8117 3.006752 GGGATGAAGGCAGTATGAGAGAG 59.993 52.174 0.00 0.00 39.69 3.20
3778 8120 2.763039 TGGGATGAAGGCAGTATGAGA 58.237 47.619 0.00 0.00 39.69 3.27
3779 8121 3.565764 TTGGGATGAAGGCAGTATGAG 57.434 47.619 0.00 0.00 39.69 2.90
3780 8122 4.314522 TTTTGGGATGAAGGCAGTATGA 57.685 40.909 0.00 0.00 39.69 2.15
3781 8123 5.361857 AGAATTTTGGGATGAAGGCAGTATG 59.638 40.000 0.00 0.00 40.87 2.39
3782 8124 5.522641 AGAATTTTGGGATGAAGGCAGTAT 58.477 37.500 0.00 0.00 0.00 2.12
3783 8125 4.934356 AGAATTTTGGGATGAAGGCAGTA 58.066 39.130 0.00 0.00 0.00 2.74
3784 8126 3.782992 AGAATTTTGGGATGAAGGCAGT 58.217 40.909 0.00 0.00 0.00 4.40
3785 8127 4.020839 ACAAGAATTTTGGGATGAAGGCAG 60.021 41.667 0.00 0.00 0.00 4.85
3786 8128 3.903090 ACAAGAATTTTGGGATGAAGGCA 59.097 39.130 0.00 0.00 0.00 4.75
3787 8129 4.221482 AGACAAGAATTTTGGGATGAAGGC 59.779 41.667 5.68 0.00 0.00 4.35
3788 8130 5.990120 AGACAAGAATTTTGGGATGAAGG 57.010 39.130 5.68 0.00 0.00 3.46
3789 8131 8.340618 TCTAAGACAAGAATTTTGGGATGAAG 57.659 34.615 5.68 0.00 0.00 3.02
3790 8132 8.884124 ATCTAAGACAAGAATTTTGGGATGAA 57.116 30.769 5.68 0.00 0.00 2.57
3791 8133 8.884124 AATCTAAGACAAGAATTTTGGGATGA 57.116 30.769 5.68 0.00 0.00 2.92
3792 8134 9.362539 CAAATCTAAGACAAGAATTTTGGGATG 57.637 33.333 5.68 0.00 28.49 3.51
3793 8135 9.093458 ACAAATCTAAGACAAGAATTTTGGGAT 57.907 29.630 0.00 0.00 33.04 3.85
3794 8136 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
3795 8137 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
3837 8179 9.151471 CCGTCTCAAAATTCTTGTCTTAGATTA 57.849 33.333 0.00 0.00 0.00 1.75
3838 8180 7.878127 TCCGTCTCAAAATTCTTGTCTTAGATT 59.122 33.333 0.00 0.00 0.00 2.40
3839 8181 7.386851 TCCGTCTCAAAATTCTTGTCTTAGAT 58.613 34.615 0.00 0.00 0.00 1.98
3840 8182 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
3841 8183 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
3842 8184 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
3843 8185 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
3844 8186 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
3845 8187 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
3846 8188 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
3847 8189 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
3848 8190 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
3849 8191 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
3850 8192 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
3851 8193 4.225267 ACATACTCCCTCCGTCTCAAAATT 59.775 41.667 0.00 0.00 0.00 1.82
3852 8194 3.775316 ACATACTCCCTCCGTCTCAAAAT 59.225 43.478 0.00 0.00 0.00 1.82
3853 8195 3.170717 ACATACTCCCTCCGTCTCAAAA 58.829 45.455 0.00 0.00 0.00 2.44
3854 8196 2.758979 GACATACTCCCTCCGTCTCAAA 59.241 50.000 0.00 0.00 0.00 2.69
3855 8197 2.376109 GACATACTCCCTCCGTCTCAA 58.624 52.381 0.00 0.00 0.00 3.02
3856 8198 1.746171 CGACATACTCCCTCCGTCTCA 60.746 57.143 0.00 0.00 0.00 3.27
3857 8199 0.945813 CGACATACTCCCTCCGTCTC 59.054 60.000 0.00 0.00 0.00 3.36
3858 8200 0.255318 ACGACATACTCCCTCCGTCT 59.745 55.000 0.00 0.00 0.00 4.18
3859 8201 1.959042 TACGACATACTCCCTCCGTC 58.041 55.000 0.00 0.00 0.00 4.79
3860 8202 2.019984 GTTACGACATACTCCCTCCGT 58.980 52.381 0.00 0.00 0.00 4.69
3861 8203 2.019249 TGTTACGACATACTCCCTCCG 58.981 52.381 0.00 0.00 0.00 4.63
3862 8204 2.361438 CCTGTTACGACATACTCCCTCC 59.639 54.545 0.00 0.00 34.72 4.30
3863 8205 2.361438 CCCTGTTACGACATACTCCCTC 59.639 54.545 0.00 0.00 34.72 4.30
3864 8206 2.292061 ACCCTGTTACGACATACTCCCT 60.292 50.000 0.00 0.00 34.72 4.20
3865 8207 2.105766 ACCCTGTTACGACATACTCCC 58.894 52.381 0.00 0.00 34.72 4.30
3866 8208 2.756760 TCACCCTGTTACGACATACTCC 59.243 50.000 0.00 0.00 34.72 3.85
3867 8209 4.445452 TTCACCCTGTTACGACATACTC 57.555 45.455 0.00 0.00 34.72 2.59
3868 8210 4.877378 TTTCACCCTGTTACGACATACT 57.123 40.909 0.00 0.00 34.72 2.12
3869 8211 6.490566 AAATTTCACCCTGTTACGACATAC 57.509 37.500 0.00 0.00 34.72 2.39
3870 8212 6.568844 GCAAAATTTCACCCTGTTACGACATA 60.569 38.462 0.00 0.00 34.72 2.29
3876 8218 3.659786 GGGCAAAATTTCACCCTGTTAC 58.340 45.455 17.41 0.00 39.42 2.50
3882 8224 0.037697 GTCCGGGCAAAATTTCACCC 60.038 55.000 15.50 15.50 39.12 4.61
3898 8240 1.896220 TGTTTGAGTGCCTGATGTCC 58.104 50.000 0.00 0.00 0.00 4.02
3899 8241 3.341823 AGATGTTTGAGTGCCTGATGTC 58.658 45.455 0.00 0.00 0.00 3.06
3906 8248 5.064441 AGCAAATAAGATGTTTGAGTGCC 57.936 39.130 4.10 0.00 38.51 5.01
3940 8312 4.222145 TCTGCTCCCGATAAACAGTAAACT 59.778 41.667 0.00 0.00 0.00 2.66
3951 8323 5.625426 GCTGAATATTCATCTGCTCCCGATA 60.625 44.000 18.26 0.00 38.34 2.92
3955 8327 3.748083 TGCTGAATATTCATCTGCTCCC 58.252 45.455 18.26 1.83 40.94 4.30
3986 8358 2.095212 GCTTTGGTACTTAAGTGCAGCC 60.095 50.000 22.80 16.32 32.02 4.85
4010 8382 4.216472 GCCTCACTTTTTCTTACCTCTTGG 59.784 45.833 0.00 0.00 39.83 3.61
4011 8383 4.216472 GGCCTCACTTTTTCTTACCTCTTG 59.784 45.833 0.00 0.00 0.00 3.02
4012 8384 4.141251 TGGCCTCACTTTTTCTTACCTCTT 60.141 41.667 3.32 0.00 0.00 2.85
4028 8400 7.432148 TCTGACTTAAATATTAGTGGCCTCA 57.568 36.000 3.32 0.00 0.00 3.86
4046 8418 3.904339 AGGGACAAGTTACACATCTGACT 59.096 43.478 0.00 0.00 0.00 3.41
4053 8425 9.747898 ATGAAAATATTAGGGACAAGTTACACA 57.252 29.630 0.00 0.00 0.00 3.72
4059 8431 9.753674 TTCTTGATGAAAATATTAGGGACAAGT 57.246 29.630 16.52 0.00 34.60 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.