Multiple sequence alignment - TraesCS1B01G157300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G157300 chr1B 100.000 3995 0 0 1 3995 266257039 266261033 0.000000e+00 7378.0
1 TraesCS1B01G157300 chr1B 75.857 1371 272 51 1278 2614 266109850 266111195 0.000000e+00 643.0
2 TraesCS1B01G157300 chr1D 93.944 2444 113 24 638 3053 192568983 192571419 0.000000e+00 3661.0
3 TraesCS1B01G157300 chr1D 96.442 815 24 2 3161 3975 192583500 192584309 0.000000e+00 1339.0
4 TraesCS1B01G157300 chr1D 90.634 363 33 1 1 363 26391890 26392251 7.760000e-132 481.0
5 TraesCS1B01G157300 chr1D 87.193 367 41 5 1 363 4576924 4577288 2.870000e-111 412.0
6 TraesCS1B01G157300 chr1D 93.939 198 11 1 379 575 192568784 192568981 8.390000e-77 298.0
7 TraesCS1B01G157300 chr1D 100.000 36 0 0 3960 3995 192584322 192584357 2.580000e-07 67.6
8 TraesCS1B01G157300 chr1A 92.328 1929 88 27 826 2719 238677830 238679733 0.000000e+00 2687.0
9 TraesCS1B01G157300 chr1A 92.209 1245 47 18 2747 3984 238679728 238680929 0.000000e+00 1716.0
10 TraesCS1B01G157300 chr1A 93.182 440 23 6 370 804 238677002 238677439 1.210000e-179 640.0
11 TraesCS1B01G157300 chr1A 75.174 1438 290 59 1214 2614 238671894 238673301 2.040000e-172 616.0
12 TraesCS1B01G157300 chr2D 76.344 1581 324 42 1050 2602 472468939 472467381 0.000000e+00 802.0
13 TraesCS1B01G157300 chr2A 78.164 1296 247 30 1326 2602 613989455 613988177 0.000000e+00 793.0
14 TraesCS1B01G157300 chr2A 85.507 483 36 16 3038 3500 404939994 404939526 1.300000e-129 473.0
15 TraesCS1B01G157300 chr2A 89.197 361 39 0 6 366 759763837 759763477 6.090000e-123 451.0
16 TraesCS1B01G157300 chr2A 87.615 218 18 3 3763 3980 404939424 404939216 1.110000e-60 244.0
17 TraesCS1B01G157300 chr2A 76.074 163 31 6 1420 1578 74776244 74776402 1.190000e-10 78.7
18 TraesCS1B01G157300 chr5A 76.413 1539 301 46 1331 2841 597687899 597686395 0.000000e+00 774.0
19 TraesCS1B01G157300 chr2B 77.778 1269 254 25 1359 2607 551638194 551639454 0.000000e+00 756.0
20 TraesCS1B01G157300 chr2B 76.074 163 31 6 1420 1578 114487353 114487511 1.190000e-10 78.7
21 TraesCS1B01G157300 chr5B 77.508 1316 252 39 1331 2618 586359636 586358337 0.000000e+00 750.0
22 TraesCS1B01G157300 chr7A 73.490 1622 340 74 1062 2628 49991148 49989562 7.600000e-147 531.0
23 TraesCS1B01G157300 chr7A 71.662 1408 337 52 1213 2592 49986833 49985460 2.300000e-87 333.0
24 TraesCS1B01G157300 chr3B 90.811 370 33 1 1 370 665225513 665225881 9.970000e-136 494.0
25 TraesCS1B01G157300 chr3B 86.595 373 46 3 1 371 252924293 252924663 3.720000e-110 409.0
26 TraesCS1B01G157300 chr3B 73.271 1171 264 41 1334 2476 576049558 576050707 2.250000e-102 383.0
27 TraesCS1B01G157300 chr5D 89.296 355 35 3 1 354 213953022 213953374 3.660000e-120 442.0
28 TraesCS1B01G157300 chr4A 72.829 1428 336 46 1213 2614 662149479 662148078 1.320000e-119 440.0
29 TraesCS1B01G157300 chr6D 87.397 365 43 3 1 363 446813650 446814013 2.220000e-112 416.0
30 TraesCS1B01G157300 chr3D 87.397 365 38 5 4 367 46468133 46467776 2.870000e-111 412.0
31 TraesCS1B01G157300 chr3D 86.508 378 45 5 1 374 298591008 298590633 1.030000e-110 411.0
32 TraesCS1B01G157300 chr6A 72.858 1249 290 33 1385 2601 104409899 104408668 2.250000e-102 383.0
33 TraesCS1B01G157300 chr6B 76.048 668 133 22 1922 2571 660259362 660260020 4.980000e-84 322.0
34 TraesCS1B01G157300 chr4D 92.857 42 2 1 3657 3698 231221795 231221835 4.310000e-05 60.2
35 TraesCS1B01G157300 chr4B 90.476 42 3 1 3657 3698 323801611 323801651 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G157300 chr1B 266257039 266261033 3994 False 7378.00 7378 100.00000 1 3995 1 chr1B.!!$F2 3994
1 TraesCS1B01G157300 chr1B 266109850 266111195 1345 False 643.00 643 75.85700 1278 2614 1 chr1B.!!$F1 1336
2 TraesCS1B01G157300 chr1D 192568784 192571419 2635 False 1979.50 3661 93.94150 379 3053 2 chr1D.!!$F3 2674
3 TraesCS1B01G157300 chr1D 192583500 192584357 857 False 703.30 1339 98.22100 3161 3995 2 chr1D.!!$F4 834
4 TraesCS1B01G157300 chr1A 238671894 238680929 9035 False 1414.75 2687 88.22325 370 3984 4 chr1A.!!$F1 3614
5 TraesCS1B01G157300 chr2D 472467381 472468939 1558 True 802.00 802 76.34400 1050 2602 1 chr2D.!!$R1 1552
6 TraesCS1B01G157300 chr2A 613988177 613989455 1278 True 793.00 793 78.16400 1326 2602 1 chr2A.!!$R1 1276
7 TraesCS1B01G157300 chr2A 404939216 404939994 778 True 358.50 473 86.56100 3038 3980 2 chr2A.!!$R3 942
8 TraesCS1B01G157300 chr5A 597686395 597687899 1504 True 774.00 774 76.41300 1331 2841 1 chr5A.!!$R1 1510
9 TraesCS1B01G157300 chr2B 551638194 551639454 1260 False 756.00 756 77.77800 1359 2607 1 chr2B.!!$F2 1248
10 TraesCS1B01G157300 chr5B 586358337 586359636 1299 True 750.00 750 77.50800 1331 2618 1 chr5B.!!$R1 1287
11 TraesCS1B01G157300 chr7A 49985460 49991148 5688 True 432.00 531 72.57600 1062 2628 2 chr7A.!!$R1 1566
12 TraesCS1B01G157300 chr3B 576049558 576050707 1149 False 383.00 383 73.27100 1334 2476 1 chr3B.!!$F2 1142
13 TraesCS1B01G157300 chr4A 662148078 662149479 1401 True 440.00 440 72.82900 1213 2614 1 chr4A.!!$R1 1401
14 TraesCS1B01G157300 chr6A 104408668 104409899 1231 True 383.00 383 72.85800 1385 2601 1 chr6A.!!$R1 1216
15 TraesCS1B01G157300 chr6B 660259362 660260020 658 False 322.00 322 76.04800 1922 2571 1 chr6B.!!$F1 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 300 0.038159 GTGTCTGTACTGCTTCCGCT 60.038 55.0 0.00 0.0 36.97 5.52 F
925 6057 0.098552 TGTGTTGCTTGCGAGTTGTG 59.901 50.0 2.14 0.0 0.00 3.33 F
926 6058 0.376852 GTGTTGCTTGCGAGTTGTGA 59.623 50.0 2.14 0.0 0.00 3.58 F
930 6062 0.657312 TGCTTGCGAGTTGTGACTTG 59.343 50.0 2.14 0.0 39.83 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2208 7399 0.038166 CCAGCAACAGCTCCCCTTTA 59.962 55.000 0.00 0.00 36.19 1.85 R
2233 7424 4.728772 AGGCTGCTATTTGGCATGTAATA 58.271 39.130 0.00 0.00 41.63 0.98 R
2952 8189 3.188786 GACATGGTGGCGACGCTC 61.189 66.667 20.77 12.86 41.78 5.03 R
2996 8233 2.116125 GTTGACCAGCTTGCCCCT 59.884 61.111 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.414700 GACGCGGTGGCACTTGAG 61.415 66.667 18.45 14.19 39.92 3.02
22 23 4.988598 ACGCGGTGGCACTTGAGG 62.989 66.667 18.45 8.59 39.92 3.86
24 25 4.643387 GCGGTGGCACTTGAGGGT 62.643 66.667 18.45 0.00 39.62 4.34
25 26 2.669569 CGGTGGCACTTGAGGGTG 60.670 66.667 18.45 0.00 39.91 4.61
44 45 4.148825 CGCCGGACCTTCCTGGAG 62.149 72.222 5.05 0.00 39.71 3.86
45 46 3.787001 GCCGGACCTTCCTGGAGG 61.787 72.222 5.05 9.73 42.75 4.30
46 47 3.083997 CCGGACCTTCCTGGAGGG 61.084 72.222 22.26 22.26 41.31 4.30
47 48 3.787001 CGGACCTTCCTGGAGGGC 61.787 72.222 23.61 15.77 44.69 5.19
50 51 3.003763 ACCTTCCTGGAGGGCGTC 61.004 66.667 23.61 0.00 41.31 5.19
72 73 2.421751 GGGCTACCCTTCTTTTCTCC 57.578 55.000 0.00 0.00 41.34 3.71
76 77 2.894902 CTACCCTTCTTTTCTCCTCGC 58.105 52.381 0.00 0.00 0.00 5.03
79 80 0.246635 CCTTCTTTTCTCCTCGCCGA 59.753 55.000 0.00 0.00 0.00 5.54
81 82 0.966920 TTCTTTTCTCCTCGCCGAGT 59.033 50.000 13.83 0.00 0.00 4.18
82 83 1.830279 TCTTTTCTCCTCGCCGAGTA 58.170 50.000 13.83 0.00 0.00 2.59
84 85 0.529378 TTTTCTCCTCGCCGAGTACC 59.471 55.000 13.83 0.00 0.00 3.34
85 86 1.651240 TTTCTCCTCGCCGAGTACCG 61.651 60.000 13.83 0.00 38.18 4.02
105 106 3.869481 GGAAACCCTTGGCAGCAA 58.131 55.556 0.00 0.00 0.00 3.91
108 109 1.734388 GAAACCCTTGGCAGCAACGT 61.734 55.000 0.00 0.00 0.00 3.99
110 111 3.726517 CCCTTGGCAGCAACGTCG 61.727 66.667 0.00 0.00 0.00 5.12
111 112 2.972505 CCTTGGCAGCAACGTCGT 60.973 61.111 0.00 0.00 0.00 4.34
112 113 2.551270 CTTGGCAGCAACGTCGTC 59.449 61.111 0.00 0.00 0.00 4.20
113 114 2.202946 TTGGCAGCAACGTCGTCA 60.203 55.556 0.00 0.00 0.00 4.35
114 115 1.568612 CTTGGCAGCAACGTCGTCAT 61.569 55.000 0.00 0.00 0.00 3.06
115 116 1.565156 TTGGCAGCAACGTCGTCATC 61.565 55.000 0.00 0.00 0.00 2.92
118 119 1.696644 CAGCAACGTCGTCATCGTC 59.303 57.895 0.00 0.00 40.69 4.20
123 124 2.572388 CGTCGTCATCGTCGCGAA 60.572 61.111 12.06 0.00 39.99 4.70
124 125 2.821843 CGTCGTCATCGTCGCGAAC 61.822 63.158 12.06 3.62 39.99 3.95
126 127 2.202440 CGTCATCGTCGCGAACCT 60.202 61.111 12.06 0.00 39.99 3.50
128 129 1.342082 CGTCATCGTCGCGAACCTTT 61.342 55.000 12.06 0.00 39.99 3.11
131 132 1.193650 TCATCGTCGCGAACCTTTTTG 59.806 47.619 12.06 2.15 39.99 2.44
132 133 0.515564 ATCGTCGCGAACCTTTTTGG 59.484 50.000 12.06 0.00 39.99 3.28
134 135 0.110823 CGTCGCGAACCTTTTTGGAG 60.111 55.000 12.06 0.00 39.71 3.86
135 136 0.237498 GTCGCGAACCTTTTTGGAGG 59.763 55.000 12.06 0.00 42.75 4.30
145 146 3.993920 CCTTTTTGGAGGTGTTGATTGG 58.006 45.455 0.00 0.00 38.35 3.16
146 147 3.387699 CCTTTTTGGAGGTGTTGATTGGT 59.612 43.478 0.00 0.00 38.35 3.67
147 148 4.586841 CCTTTTTGGAGGTGTTGATTGGTA 59.413 41.667 0.00 0.00 38.35 3.25
148 149 5.245977 CCTTTTTGGAGGTGTTGATTGGTAT 59.754 40.000 0.00 0.00 38.35 2.73
150 151 3.260475 TGGAGGTGTTGATTGGTATCG 57.740 47.619 0.00 0.00 33.23 2.92
151 152 2.093181 TGGAGGTGTTGATTGGTATCGG 60.093 50.000 0.00 0.00 33.23 4.18
154 155 1.365699 GTGTTGATTGGTATCGGCGT 58.634 50.000 6.85 0.00 33.23 5.68
155 156 1.735571 GTGTTGATTGGTATCGGCGTT 59.264 47.619 6.85 0.00 33.23 4.84
156 157 2.160813 GTGTTGATTGGTATCGGCGTTT 59.839 45.455 6.85 0.00 33.23 3.60
157 158 2.417239 TGTTGATTGGTATCGGCGTTTC 59.583 45.455 6.85 0.00 33.23 2.78
158 159 1.282817 TGATTGGTATCGGCGTTTCG 58.717 50.000 6.85 0.00 33.23 3.46
159 160 0.580104 GATTGGTATCGGCGTTTCGG 59.420 55.000 6.85 0.00 0.00 4.30
161 162 0.458889 TTGGTATCGGCGTTTCGGAG 60.459 55.000 6.85 0.00 0.00 4.63
162 163 1.140375 GGTATCGGCGTTTCGGAGT 59.860 57.895 6.85 0.00 0.00 3.85
163 164 0.869028 GGTATCGGCGTTTCGGAGTC 60.869 60.000 6.85 0.00 0.00 3.36
164 165 0.100146 GTATCGGCGTTTCGGAGTCT 59.900 55.000 6.85 0.00 0.00 3.24
165 166 1.331756 GTATCGGCGTTTCGGAGTCTA 59.668 52.381 6.85 0.00 0.00 2.59
166 167 0.813184 ATCGGCGTTTCGGAGTCTAA 59.187 50.000 6.85 0.00 0.00 2.10
167 168 0.169672 TCGGCGTTTCGGAGTCTAAG 59.830 55.000 6.85 0.00 0.00 2.18
168 169 0.169672 CGGCGTTTCGGAGTCTAAGA 59.830 55.000 0.00 0.00 0.00 2.10
169 170 1.794437 CGGCGTTTCGGAGTCTAAGAG 60.794 57.143 0.00 0.00 0.00 2.85
171 172 1.135344 GCGTTTCGGAGTCTAAGAGCT 60.135 52.381 0.00 0.00 0.00 4.09
172 173 2.671632 GCGTTTCGGAGTCTAAGAGCTT 60.672 50.000 0.00 0.00 0.00 3.74
173 174 2.917971 CGTTTCGGAGTCTAAGAGCTTG 59.082 50.000 0.00 0.00 0.00 4.01
176 177 1.819288 TCGGAGTCTAAGAGCTTGGTG 59.181 52.381 0.00 0.00 0.00 4.17
178 179 1.208293 GGAGTCTAAGAGCTTGGTGGG 59.792 57.143 0.00 0.00 0.00 4.61
179 180 2.180276 GAGTCTAAGAGCTTGGTGGGA 58.820 52.381 0.00 0.00 0.00 4.37
180 181 2.167487 GAGTCTAAGAGCTTGGTGGGAG 59.833 54.545 0.00 0.00 0.00 4.30
181 182 2.180276 GTCTAAGAGCTTGGTGGGAGA 58.820 52.381 0.00 0.00 0.00 3.71
183 184 3.034635 TCTAAGAGCTTGGTGGGAGATC 58.965 50.000 0.00 0.00 0.00 2.75
184 185 1.963985 AAGAGCTTGGTGGGAGATCT 58.036 50.000 0.00 0.00 41.30 2.75
185 186 2.856760 AGAGCTTGGTGGGAGATCTA 57.143 50.000 0.00 0.00 38.05 1.98
186 187 2.393646 AGAGCTTGGTGGGAGATCTAC 58.606 52.381 0.00 0.00 38.05 2.59
187 188 1.067821 GAGCTTGGTGGGAGATCTACG 59.932 57.143 0.00 0.00 0.00 3.51
188 189 0.105039 GCTTGGTGGGAGATCTACGG 59.895 60.000 0.00 0.00 0.00 4.02
189 190 1.486211 CTTGGTGGGAGATCTACGGT 58.514 55.000 0.00 0.00 0.00 4.83
190 191 1.137086 CTTGGTGGGAGATCTACGGTG 59.863 57.143 0.00 0.00 0.00 4.94
191 192 0.686441 TGGTGGGAGATCTACGGTGG 60.686 60.000 0.00 0.00 0.00 4.61
192 193 0.686769 GGTGGGAGATCTACGGTGGT 60.687 60.000 0.00 0.00 0.00 4.16
194 195 1.134788 GTGGGAGATCTACGGTGGTTG 60.135 57.143 0.00 0.00 0.00 3.77
195 196 0.179081 GGGAGATCTACGGTGGTTGC 60.179 60.000 0.00 0.00 0.00 4.17
197 198 1.471676 GGAGATCTACGGTGGTTGCAG 60.472 57.143 0.00 0.00 0.00 4.41
198 199 1.204941 GAGATCTACGGTGGTTGCAGT 59.795 52.381 0.00 0.00 0.00 4.40
199 200 1.066858 AGATCTACGGTGGTTGCAGTG 60.067 52.381 0.00 0.00 0.00 3.66
201 202 1.070786 CTACGGTGGTTGCAGTGGT 59.929 57.895 0.00 0.00 0.00 4.16
202 203 0.949105 CTACGGTGGTTGCAGTGGTC 60.949 60.000 0.00 0.00 0.00 4.02
204 205 3.660111 GGTGGTTGCAGTGGTCGC 61.660 66.667 0.00 0.00 0.00 5.19
205 206 4.012895 GTGGTTGCAGTGGTCGCG 62.013 66.667 0.00 0.00 0.00 5.87
206 207 4.228567 TGGTTGCAGTGGTCGCGA 62.229 61.111 3.71 3.71 0.00 5.87
207 208 3.414700 GGTTGCAGTGGTCGCGAG 61.415 66.667 10.24 0.00 0.00 5.03
212 213 2.357517 CAGTGGTCGCGAGGCTTT 60.358 61.111 10.24 0.00 34.89 3.51
213 214 1.961277 CAGTGGTCGCGAGGCTTTT 60.961 57.895 10.24 0.00 34.89 2.27
216 217 2.314647 TGGTCGCGAGGCTTTTTCG 61.315 57.895 10.24 0.00 40.85 3.46
217 218 2.315386 GGTCGCGAGGCTTTTTCGT 61.315 57.895 10.24 0.00 40.08 3.85
218 219 1.568025 GTCGCGAGGCTTTTTCGTT 59.432 52.632 10.24 0.00 40.08 3.85
219 220 0.041576 GTCGCGAGGCTTTTTCGTTT 60.042 50.000 10.24 0.00 40.08 3.60
220 221 0.658897 TCGCGAGGCTTTTTCGTTTT 59.341 45.000 3.71 0.00 40.08 2.43
221 222 1.064357 TCGCGAGGCTTTTTCGTTTTT 59.936 42.857 3.71 0.00 40.08 1.94
222 223 1.187055 CGCGAGGCTTTTTCGTTTTTG 59.813 47.619 0.00 0.00 40.08 2.44
223 224 2.190161 GCGAGGCTTTTTCGTTTTTGT 58.810 42.857 0.00 0.00 40.08 2.83
225 226 2.462565 CGAGGCTTTTTCGTTTTTGTCG 59.537 45.455 0.00 0.00 33.57 4.35
227 228 4.287720 GAGGCTTTTTCGTTTTTGTCGAT 58.712 39.130 0.00 0.00 37.18 3.59
228 229 4.287720 AGGCTTTTTCGTTTTTGTCGATC 58.712 39.130 0.00 0.00 37.18 3.69
229 230 3.424198 GGCTTTTTCGTTTTTGTCGATCC 59.576 43.478 0.00 0.00 37.18 3.36
230 231 3.117346 GCTTTTTCGTTTTTGTCGATCCG 59.883 43.478 0.00 0.00 37.18 4.18
231 232 2.303707 TTTCGTTTTTGTCGATCCGC 57.696 45.000 0.00 0.00 37.18 5.54
232 233 0.513820 TTCGTTTTTGTCGATCCGCC 59.486 50.000 0.00 0.00 37.18 6.13
233 234 1.225637 CGTTTTTGTCGATCCGCCG 60.226 57.895 0.00 0.00 0.00 6.46
234 235 1.864176 GTTTTTGTCGATCCGCCGT 59.136 52.632 0.00 0.00 0.00 5.68
236 237 0.236187 TTTTTGTCGATCCGCCGTTG 59.764 50.000 0.00 0.00 0.00 4.10
237 238 0.881159 TTTTGTCGATCCGCCGTTGT 60.881 50.000 0.00 0.00 0.00 3.32
238 239 1.286354 TTTGTCGATCCGCCGTTGTC 61.286 55.000 0.00 0.00 0.00 3.18
239 240 3.245315 GTCGATCCGCCGTTGTCG 61.245 66.667 0.00 0.00 35.55 4.35
240 241 3.433453 TCGATCCGCCGTTGTCGA 61.433 61.111 2.36 2.36 40.38 4.20
241 242 3.245315 CGATCCGCCGTTGTCGAC 61.245 66.667 9.11 9.11 39.71 4.20
242 243 2.126228 GATCCGCCGTTGTCGACA 60.126 61.111 15.76 15.76 39.71 4.35
243 244 1.518572 GATCCGCCGTTGTCGACAT 60.519 57.895 20.80 0.53 39.71 3.06
244 245 1.480219 GATCCGCCGTTGTCGACATC 61.480 60.000 20.80 17.65 39.71 3.06
245 246 1.945354 ATCCGCCGTTGTCGACATCT 61.945 55.000 20.80 0.00 39.71 2.90
247 248 1.733041 CGCCGTTGTCGACATCTGT 60.733 57.895 20.80 0.00 39.71 3.41
248 249 1.282248 CGCCGTTGTCGACATCTGTT 61.282 55.000 20.80 0.00 39.71 3.16
250 251 1.068474 CCGTTGTCGACATCTGTTCC 58.932 55.000 20.80 1.00 39.71 3.62
251 252 1.336887 CCGTTGTCGACATCTGTTCCT 60.337 52.381 20.80 0.00 39.71 3.36
252 253 2.404215 CGTTGTCGACATCTGTTCCTT 58.596 47.619 20.80 0.00 39.71 3.36
253 254 2.800544 CGTTGTCGACATCTGTTCCTTT 59.199 45.455 20.80 0.00 39.71 3.11
254 255 3.247648 CGTTGTCGACATCTGTTCCTTTT 59.752 43.478 20.80 0.00 39.71 2.27
255 256 4.446385 CGTTGTCGACATCTGTTCCTTTTA 59.554 41.667 20.80 0.00 39.71 1.52
256 257 5.120208 CGTTGTCGACATCTGTTCCTTTTAT 59.880 40.000 20.80 0.00 39.71 1.40
257 258 6.347402 CGTTGTCGACATCTGTTCCTTTTATT 60.347 38.462 20.80 0.00 39.71 1.40
258 259 7.360361 GTTGTCGACATCTGTTCCTTTTATTT 58.640 34.615 20.80 0.00 0.00 1.40
261 262 7.444183 TGTCGACATCTGTTCCTTTTATTTTCT 59.556 33.333 15.76 0.00 0.00 2.52
262 263 7.958025 GTCGACATCTGTTCCTTTTATTTTCTC 59.042 37.037 11.55 0.00 0.00 2.87
263 264 7.878127 TCGACATCTGTTCCTTTTATTTTCTCT 59.122 33.333 0.00 0.00 0.00 3.10
264 265 8.507249 CGACATCTGTTCCTTTTATTTTCTCTT 58.493 33.333 0.00 0.00 0.00 2.85
268 269 8.446599 TCTGTTCCTTTTATTTTCTCTTTCGT 57.553 30.769 0.00 0.00 0.00 3.85
269 270 8.899771 TCTGTTCCTTTTATTTTCTCTTTCGTT 58.100 29.630 0.00 0.00 0.00 3.85
270 271 9.516314 CTGTTCCTTTTATTTTCTCTTTCGTTT 57.484 29.630 0.00 0.00 0.00 3.60
271 272 9.863845 TGTTCCTTTTATTTTCTCTTTCGTTTT 57.136 25.926 0.00 0.00 0.00 2.43
292 293 3.936902 TTTTTGACGTGTCTGTACTGC 57.063 42.857 0.00 0.00 0.00 4.40
293 294 2.882927 TTTGACGTGTCTGTACTGCT 57.117 45.000 0.00 0.00 0.00 4.24
294 295 2.882927 TTGACGTGTCTGTACTGCTT 57.117 45.000 0.00 0.00 0.00 3.91
296 297 1.000607 TGACGTGTCTGTACTGCTTCC 60.001 52.381 0.00 0.00 0.00 3.46
298 299 1.344942 CGTGTCTGTACTGCTTCCGC 61.345 60.000 0.00 0.00 0.00 5.54
299 300 0.038159 GTGTCTGTACTGCTTCCGCT 60.038 55.000 0.00 0.00 36.97 5.52
300 301 0.679505 TGTCTGTACTGCTTCCGCTT 59.320 50.000 0.00 0.00 36.97 4.68
301 302 1.336887 TGTCTGTACTGCTTCCGCTTC 60.337 52.381 0.00 0.00 36.97 3.86
302 303 0.966179 TCTGTACTGCTTCCGCTTCA 59.034 50.000 0.00 0.00 36.97 3.02
303 304 1.067565 TCTGTACTGCTTCCGCTTCAG 60.068 52.381 0.00 0.00 36.97 3.02
304 305 0.670546 TGTACTGCTTCCGCTTCAGC 60.671 55.000 0.00 0.00 36.97 4.26
305 306 0.670546 GTACTGCTTCCGCTTCAGCA 60.671 55.000 0.00 1.23 43.90 4.41
306 307 0.250234 TACTGCTTCCGCTTCAGCAT 59.750 50.000 0.00 0.00 44.98 3.79
307 308 1.023513 ACTGCTTCCGCTTCAGCATC 61.024 55.000 0.00 0.00 44.98 3.91
308 309 0.743701 CTGCTTCCGCTTCAGCATCT 60.744 55.000 0.00 0.00 44.98 2.90
310 311 1.139654 TGCTTCCGCTTCAGCATCTAT 59.860 47.619 0.00 0.00 41.20 1.98
311 312 2.365293 TGCTTCCGCTTCAGCATCTATA 59.635 45.455 0.00 0.00 41.20 1.31
312 313 2.992543 GCTTCCGCTTCAGCATCTATAG 59.007 50.000 0.00 0.00 42.21 1.31
314 315 4.626042 CTTCCGCTTCAGCATCTATAGTT 58.374 43.478 0.00 0.00 42.21 2.24
315 316 3.982475 TCCGCTTCAGCATCTATAGTTG 58.018 45.455 6.46 6.46 42.21 3.16
316 317 3.062763 CCGCTTCAGCATCTATAGTTGG 58.937 50.000 11.81 0.00 42.21 3.77
318 319 4.122776 CGCTTCAGCATCTATAGTTGGTT 58.877 43.478 11.86 0.00 42.21 3.67
319 320 4.025396 CGCTTCAGCATCTATAGTTGGTTG 60.025 45.833 11.86 8.63 42.21 3.77
320 321 4.878397 GCTTCAGCATCTATAGTTGGTTGT 59.122 41.667 11.86 0.00 41.59 3.32
324 325 6.759272 TCAGCATCTATAGTTGGTTGTATCC 58.241 40.000 11.86 0.00 0.00 2.59
325 326 5.635280 CAGCATCTATAGTTGGTTGTATCCG 59.365 44.000 11.86 0.00 0.00 4.18
326 327 5.304614 AGCATCTATAGTTGGTTGTATCCGT 59.695 40.000 9.25 0.00 0.00 4.69
327 328 5.989777 GCATCTATAGTTGGTTGTATCCGTT 59.010 40.000 11.81 0.00 0.00 4.44
329 330 5.909477 TCTATAGTTGGTTGTATCCGTTGG 58.091 41.667 0.00 0.00 0.00 3.77
330 331 2.943036 AGTTGGTTGTATCCGTTGGT 57.057 45.000 0.00 0.00 0.00 3.67
331 332 3.217681 AGTTGGTTGTATCCGTTGGTT 57.782 42.857 0.00 0.00 0.00 3.67
332 333 2.882137 AGTTGGTTGTATCCGTTGGTTG 59.118 45.455 0.00 0.00 0.00 3.77
333 334 1.240256 TGGTTGTATCCGTTGGTTGC 58.760 50.000 0.00 0.00 0.00 4.17
334 335 1.202830 TGGTTGTATCCGTTGGTTGCT 60.203 47.619 0.00 0.00 0.00 3.91
335 336 1.883926 GGTTGTATCCGTTGGTTGCTT 59.116 47.619 0.00 0.00 0.00 3.91
336 337 2.295070 GGTTGTATCCGTTGGTTGCTTT 59.705 45.455 0.00 0.00 0.00 3.51
337 338 3.305110 GTTGTATCCGTTGGTTGCTTTG 58.695 45.455 0.00 0.00 0.00 2.77
338 339 2.577700 TGTATCCGTTGGTTGCTTTGT 58.422 42.857 0.00 0.00 0.00 2.83
339 340 3.741249 TGTATCCGTTGGTTGCTTTGTA 58.259 40.909 0.00 0.00 0.00 2.41
340 341 4.328536 TGTATCCGTTGGTTGCTTTGTAT 58.671 39.130 0.00 0.00 0.00 2.29
341 342 4.762765 TGTATCCGTTGGTTGCTTTGTATT 59.237 37.500 0.00 0.00 0.00 1.89
342 343 5.938710 TGTATCCGTTGGTTGCTTTGTATTA 59.061 36.000 0.00 0.00 0.00 0.98
343 344 4.752661 TCCGTTGGTTGCTTTGTATTAC 57.247 40.909 0.00 0.00 0.00 1.89
344 345 4.135306 TCCGTTGGTTGCTTTGTATTACA 58.865 39.130 0.00 0.00 0.00 2.41
345 346 4.579340 TCCGTTGGTTGCTTTGTATTACAA 59.421 37.500 5.14 5.14 36.11 2.41
346 347 5.067413 TCCGTTGGTTGCTTTGTATTACAAA 59.933 36.000 18.39 18.39 44.91 2.83
354 355 3.436577 TTTGTATTACAAAGCGGGGGA 57.563 42.857 16.17 0.00 42.55 4.81
356 357 3.436577 TGTATTACAAAGCGGGGGAAA 57.563 42.857 0.00 0.00 0.00 3.13
357 358 3.083293 TGTATTACAAAGCGGGGGAAAC 58.917 45.455 0.00 0.00 0.00 2.78
358 359 5.587934 TTGTATTACAAAGCGGGGGAAACC 61.588 45.833 6.79 0.00 42.37 3.27
386 5126 4.183101 TCGTTATAAAATCCACACCGGTC 58.817 43.478 2.59 0.00 35.57 4.79
565 5306 5.280945 ACGATTGTCAAACAACAAATCCAG 58.719 37.500 0.00 0.00 41.40 3.86
569 5310 5.163302 TGTCAAACAACAAATCCAGTACG 57.837 39.130 0.00 0.00 0.00 3.67
575 5316 0.672401 ACAAATCCAGTACGGTGGCG 60.672 55.000 0.00 0.00 37.53 5.69
578 5319 0.458669 AATCCAGTACGGTGGCGTAG 59.541 55.000 0.00 0.00 37.53 3.51
632 5373 2.484203 GACCGCGTCGCTTACTCT 59.516 61.111 16.36 0.00 0.00 3.24
635 5376 1.868251 CCGCGTCGCTTACTCTCAC 60.868 63.158 16.36 0.00 0.00 3.51
636 5377 2.209076 CGCGTCGCTTACTCTCACG 61.209 63.158 16.36 0.00 0.00 4.35
677 5421 6.619023 AGGGATCTCTCTGTTGATTATTTCCT 59.381 38.462 0.00 0.00 0.00 3.36
774 5518 0.396435 TACTCACACCCACTTGCCAG 59.604 55.000 0.00 0.00 0.00 4.85
810 5566 1.893062 CAGGTCGCTCTCATGGTGA 59.107 57.895 0.00 0.00 0.00 4.02
824 5580 0.475632 TGGTGACCATCCTTCCCTGT 60.476 55.000 0.00 0.00 0.00 4.00
832 5946 1.561542 CATCCTTCCCTGTTAGCCAGT 59.438 52.381 0.00 0.00 39.74 4.00
833 5947 2.634639 TCCTTCCCTGTTAGCCAGTA 57.365 50.000 0.00 0.00 39.74 2.74
834 5948 2.185387 TCCTTCCCTGTTAGCCAGTAC 58.815 52.381 0.00 0.00 39.74 2.73
835 5949 1.906574 CCTTCCCTGTTAGCCAGTACA 59.093 52.381 0.00 0.00 39.74 2.90
836 5950 2.093447 CCTTCCCTGTTAGCCAGTACAG 60.093 54.545 0.00 0.00 39.74 2.74
837 5951 0.902531 TCCCTGTTAGCCAGTACAGC 59.097 55.000 0.00 0.00 40.28 4.40
862 5977 1.133809 TGGTAGGTTCCTTGCAGCCT 61.134 55.000 0.00 0.00 35.28 4.58
883 5998 4.019591 CCTACAGTAACCCAGGCTAAACTT 60.020 45.833 0.00 0.00 0.00 2.66
886 6001 5.944135 ACAGTAACCCAGGCTAAACTTTAA 58.056 37.500 0.00 0.00 0.00 1.52
887 6002 5.766670 ACAGTAACCCAGGCTAAACTTTAAC 59.233 40.000 0.00 0.00 0.00 2.01
890 6022 7.013942 CAGTAACCCAGGCTAAACTTTAACTTT 59.986 37.037 0.00 0.00 0.00 2.66
917 6049 2.558359 ACCTAATCCTTGTGTTGCTTGC 59.442 45.455 0.00 0.00 0.00 4.01
920 6052 0.877071 ATCCTTGTGTTGCTTGCGAG 59.123 50.000 0.00 0.00 0.00 5.03
922 6054 0.381801 CCTTGTGTTGCTTGCGAGTT 59.618 50.000 2.14 0.00 0.00 3.01
923 6055 1.469917 CTTGTGTTGCTTGCGAGTTG 58.530 50.000 2.14 0.00 0.00 3.16
924 6056 0.808125 TTGTGTTGCTTGCGAGTTGT 59.192 45.000 2.14 0.00 0.00 3.32
925 6057 0.098552 TGTGTTGCTTGCGAGTTGTG 59.901 50.000 2.14 0.00 0.00 3.33
926 6058 0.376852 GTGTTGCTTGCGAGTTGTGA 59.623 50.000 2.14 0.00 0.00 3.58
927 6059 0.376852 TGTTGCTTGCGAGTTGTGAC 59.623 50.000 2.14 0.00 0.00 3.67
928 6060 0.657840 GTTGCTTGCGAGTTGTGACT 59.342 50.000 2.14 0.00 39.32 3.41
929 6061 1.064060 GTTGCTTGCGAGTTGTGACTT 59.936 47.619 2.14 0.00 35.88 3.01
930 6062 0.657312 TGCTTGCGAGTTGTGACTTG 59.343 50.000 2.14 0.00 39.83 3.16
931 6063 0.657840 GCTTGCGAGTTGTGACTTGT 59.342 50.000 2.14 0.00 39.17 3.16
932 6064 1.595489 GCTTGCGAGTTGTGACTTGTG 60.595 52.381 2.14 0.00 39.17 3.33
933 6065 1.003545 CTTGCGAGTTGTGACTTGTGG 60.004 52.381 0.00 0.00 39.17 4.17
934 6066 1.279840 GCGAGTTGTGACTTGTGGC 59.720 57.895 0.00 0.00 39.17 5.01
935 6067 1.941812 CGAGTTGTGACTTGTGGCC 59.058 57.895 0.00 0.00 35.88 5.36
966 6098 2.954611 GGCGGTCAAAGTTGAGGC 59.045 61.111 7.98 7.98 37.98 4.70
1011 6143 2.757099 GGCACCATGCTTCCCAGG 60.757 66.667 0.13 0.00 44.28 4.45
1046 6194 2.519302 GCTTGTGGCAGTGGGTGT 60.519 61.111 0.00 0.00 41.35 4.16
1047 6195 2.555547 GCTTGTGGCAGTGGGTGTC 61.556 63.158 0.00 0.00 41.35 3.67
1048 6196 2.203139 TTGTGGCAGTGGGTGTCG 60.203 61.111 0.00 0.00 31.02 4.35
1236 6390 2.589798 TCTCGACCACTTTCGTGTTT 57.410 45.000 0.00 0.00 39.55 2.83
2184 7375 3.118454 CGGCATCGCAACCTCGTT 61.118 61.111 0.00 0.00 0.00 3.85
2187 7378 1.573829 GGCATCGCAACCTCGTTCAA 61.574 55.000 0.00 0.00 0.00 2.69
2702 7939 3.354678 GCGGAATGGCGCCATTAT 58.645 55.556 45.55 31.32 45.50 1.28
2996 8233 3.147595 CCTCTCCGGCCGATGACA 61.148 66.667 30.73 2.46 0.00 3.58
3008 8245 1.751927 GATGACAGGGGCAAGCTGG 60.752 63.158 0.00 0.00 0.00 4.85
3018 8255 1.009675 GCAAGCTGGTCAACACGTG 60.010 57.895 15.48 15.48 0.00 4.49
3053 8291 8.756486 TTGATCTGATGAATGTATGTTTGGAT 57.244 30.769 0.00 0.00 0.00 3.41
3158 8419 8.651389 TGGAGTATAGGATTTCTTGGAATACTG 58.349 37.037 0.00 0.00 32.50 2.74
3208 8703 4.344968 TCACTCTCAGGATGTGAACTTTGA 59.655 41.667 0.00 0.00 38.24 2.69
3226 8721 4.998671 TTGACAAGATTGCAGTTTGGAA 57.001 36.364 10.41 0.00 30.73 3.53
3229 8724 6.647334 TGACAAGATTGCAGTTTGGAATTA 57.353 33.333 10.41 0.00 38.55 1.40
3233 8728 8.907222 ACAAGATTGCAGTTTGGAATTATTTT 57.093 26.923 10.41 0.00 38.55 1.82
3234 8729 9.341078 ACAAGATTGCAGTTTGGAATTATTTTT 57.659 25.926 10.41 0.00 38.55 1.94
3359 8862 1.964373 GTCGGACACCACGCCAAAT 60.964 57.895 2.62 0.00 0.00 2.32
3524 9064 5.654650 TCTTTTTCTTTCCCAAGCTACAACA 59.345 36.000 0.00 0.00 0.00 3.33
3535 9075 5.010012 CCCAAGCTACAACAAAATGTTCTCT 59.990 40.000 0.00 0.00 38.77 3.10
3879 10771 5.046159 TCGTACCATTCTCCACCTATTTTGT 60.046 40.000 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.988598 CCTCAAGTGCCACCGCGT 62.989 66.667 4.92 0.00 38.08 6.01
7 8 4.643387 ACCCTCAAGTGCCACCGC 62.643 66.667 0.00 0.00 0.00 5.68
8 9 2.669569 CACCCTCAAGTGCCACCG 60.670 66.667 0.00 0.00 0.00 4.94
27 28 4.148825 CTCCAGGAAGGTCCGGCG 62.149 72.222 0.00 0.00 42.75 6.46
28 29 3.787001 CCTCCAGGAAGGTCCGGC 61.787 72.222 0.00 0.00 42.75 6.13
29 30 3.083997 CCCTCCAGGAAGGTCCGG 61.084 72.222 0.00 0.00 42.75 5.14
30 31 3.787001 GCCCTCCAGGAAGGTCCG 61.787 72.222 5.94 0.00 42.75 4.79
31 32 3.787001 CGCCCTCCAGGAAGGTCC 61.787 72.222 5.94 0.00 38.24 4.46
32 33 3.003763 ACGCCCTCCAGGAAGGTC 61.004 66.667 5.94 0.00 38.24 3.85
53 54 1.916874 AGGAGAAAAGAAGGGTAGCCC 59.083 52.381 7.51 0.00 45.90 5.19
56 57 2.418884 GGCGAGGAGAAAAGAAGGGTAG 60.419 54.545 0.00 0.00 0.00 3.18
57 58 1.553704 GGCGAGGAGAAAAGAAGGGTA 59.446 52.381 0.00 0.00 0.00 3.69
60 61 0.246635 TCGGCGAGGAGAAAAGAAGG 59.753 55.000 4.99 0.00 0.00 3.46
61 62 1.067495 ACTCGGCGAGGAGAAAAGAAG 60.067 52.381 36.81 12.00 37.49 2.85
62 63 0.966920 ACTCGGCGAGGAGAAAAGAA 59.033 50.000 36.81 0.00 37.49 2.52
63 64 1.471684 GTACTCGGCGAGGAGAAAAGA 59.528 52.381 36.81 11.49 37.49 2.52
64 65 1.469423 GGTACTCGGCGAGGAGAAAAG 60.469 57.143 36.81 14.01 37.49 2.27
65 66 0.529378 GGTACTCGGCGAGGAGAAAA 59.471 55.000 36.81 14.61 37.49 2.29
66 67 1.651240 CGGTACTCGGCGAGGAGAAA 61.651 60.000 36.81 16.30 37.49 2.52
67 68 2.110967 CGGTACTCGGCGAGGAGAA 61.111 63.158 36.81 18.68 37.49 2.87
68 69 2.513204 CGGTACTCGGCGAGGAGA 60.513 66.667 36.81 20.99 37.49 3.71
87 88 1.836604 TTGCTGCCAAGGGTTTCCC 60.837 57.895 0.00 0.00 45.90 3.97
88 89 1.367471 GTTGCTGCCAAGGGTTTCC 59.633 57.895 0.00 0.00 0.00 3.13
89 90 1.007387 CGTTGCTGCCAAGGGTTTC 60.007 57.895 0.00 0.00 34.17 2.78
92 93 2.594592 GACGTTGCTGCCAAGGGT 60.595 61.111 0.00 0.00 40.25 4.34
94 95 2.954753 GACGACGTTGCTGCCAAGG 61.955 63.158 0.13 0.37 41.36 3.61
95 96 1.568612 ATGACGACGTTGCTGCCAAG 61.569 55.000 0.13 0.00 0.00 3.61
97 98 2.027073 GATGACGACGTTGCTGCCA 61.027 57.895 0.13 0.00 0.00 4.92
98 99 2.778679 GATGACGACGTTGCTGCC 59.221 61.111 0.13 0.00 0.00 4.85
99 100 2.267227 GACGATGACGACGTTGCTGC 62.267 60.000 0.13 0.00 43.97 5.25
100 101 1.696644 GACGATGACGACGTTGCTG 59.303 57.895 0.13 0.00 43.97 4.41
101 102 4.148230 GACGATGACGACGTTGCT 57.852 55.556 0.13 0.00 43.97 3.91
108 109 2.191354 AAGGTTCGCGACGATGACGA 62.191 55.000 9.15 0.00 42.66 4.20
110 111 0.788391 AAAAGGTTCGCGACGATGAC 59.212 50.000 9.15 3.23 35.23 3.06
111 112 1.193650 CAAAAAGGTTCGCGACGATGA 59.806 47.619 9.15 0.00 35.23 2.92
112 113 1.591248 CAAAAAGGTTCGCGACGATG 58.409 50.000 9.15 0.00 35.23 3.84
113 114 0.515564 CCAAAAAGGTTCGCGACGAT 59.484 50.000 9.15 0.00 35.23 3.73
114 115 0.530211 TCCAAAAAGGTTCGCGACGA 60.530 50.000 9.15 0.00 39.02 4.20
115 116 0.110823 CTCCAAAAAGGTTCGCGACG 60.111 55.000 9.15 0.00 39.02 5.12
123 124 8.879251 GATACCAATCAACACCTCCAAAAAGGT 61.879 40.741 0.00 0.00 39.93 3.50
124 125 3.387699 ACCAATCAACACCTCCAAAAAGG 59.612 43.478 0.00 0.00 42.55 3.11
126 127 5.048364 CGATACCAATCAACACCTCCAAAAA 60.048 40.000 0.00 0.00 31.93 1.94
128 129 4.006989 CGATACCAATCAACACCTCCAAA 58.993 43.478 0.00 0.00 31.93 3.28
131 132 2.561569 CCGATACCAATCAACACCTCC 58.438 52.381 0.00 0.00 31.93 4.30
132 133 1.940613 GCCGATACCAATCAACACCTC 59.059 52.381 0.00 0.00 31.93 3.85
134 135 0.655733 CGCCGATACCAATCAACACC 59.344 55.000 0.00 0.00 31.93 4.16
135 136 1.365699 ACGCCGATACCAATCAACAC 58.634 50.000 0.00 0.00 31.93 3.32
136 137 2.102070 AACGCCGATACCAATCAACA 57.898 45.000 0.00 0.00 31.93 3.33
137 138 2.536130 CGAAACGCCGATACCAATCAAC 60.536 50.000 0.00 0.00 31.93 3.18
138 139 1.661617 CGAAACGCCGATACCAATCAA 59.338 47.619 0.00 0.00 31.93 2.57
139 140 1.282817 CGAAACGCCGATACCAATCA 58.717 50.000 0.00 0.00 31.93 2.57
142 143 0.458889 CTCCGAAACGCCGATACCAA 60.459 55.000 0.00 0.00 0.00 3.67
143 144 1.140161 CTCCGAAACGCCGATACCA 59.860 57.895 0.00 0.00 0.00 3.25
144 145 0.869028 GACTCCGAAACGCCGATACC 60.869 60.000 0.00 0.00 0.00 2.73
145 146 0.100146 AGACTCCGAAACGCCGATAC 59.900 55.000 0.00 0.00 0.00 2.24
146 147 1.667236 TAGACTCCGAAACGCCGATA 58.333 50.000 0.00 0.00 0.00 2.92
147 148 0.813184 TTAGACTCCGAAACGCCGAT 59.187 50.000 0.00 0.00 0.00 4.18
148 149 0.169672 CTTAGACTCCGAAACGCCGA 59.830 55.000 0.00 0.00 0.00 5.54
150 151 1.910688 CTCTTAGACTCCGAAACGCC 58.089 55.000 0.00 0.00 0.00 5.68
151 152 1.135344 AGCTCTTAGACTCCGAAACGC 60.135 52.381 0.00 0.00 0.00 4.84
154 155 2.897969 ACCAAGCTCTTAGACTCCGAAA 59.102 45.455 0.00 0.00 0.00 3.46
155 156 2.231478 CACCAAGCTCTTAGACTCCGAA 59.769 50.000 0.00 0.00 0.00 4.30
156 157 1.819288 CACCAAGCTCTTAGACTCCGA 59.181 52.381 0.00 0.00 0.00 4.55
157 158 1.134965 CCACCAAGCTCTTAGACTCCG 60.135 57.143 0.00 0.00 0.00 4.63
158 159 1.208293 CCCACCAAGCTCTTAGACTCC 59.792 57.143 0.00 0.00 0.00 3.85
159 160 2.167487 CTCCCACCAAGCTCTTAGACTC 59.833 54.545 0.00 0.00 0.00 3.36
161 162 2.180276 TCTCCCACCAAGCTCTTAGAC 58.820 52.381 0.00 0.00 0.00 2.59
162 163 2.623418 TCTCCCACCAAGCTCTTAGA 57.377 50.000 0.00 0.00 0.00 2.10
163 164 3.037549 AGATCTCCCACCAAGCTCTTAG 58.962 50.000 0.00 0.00 0.00 2.18
164 165 3.121929 AGATCTCCCACCAAGCTCTTA 57.878 47.619 0.00 0.00 0.00 2.10
165 166 1.963985 AGATCTCCCACCAAGCTCTT 58.036 50.000 0.00 0.00 0.00 2.85
166 167 2.393646 GTAGATCTCCCACCAAGCTCT 58.606 52.381 0.00 0.00 0.00 4.09
167 168 1.067821 CGTAGATCTCCCACCAAGCTC 59.932 57.143 0.00 0.00 0.00 4.09
168 169 1.115467 CGTAGATCTCCCACCAAGCT 58.885 55.000 0.00 0.00 0.00 3.74
169 170 0.105039 CCGTAGATCTCCCACCAAGC 59.895 60.000 0.00 0.00 0.00 4.01
171 172 1.191535 CACCGTAGATCTCCCACCAA 58.808 55.000 0.00 0.00 0.00 3.67
172 173 0.686441 CCACCGTAGATCTCCCACCA 60.686 60.000 0.00 0.00 0.00 4.17
173 174 0.686769 ACCACCGTAGATCTCCCACC 60.687 60.000 0.00 0.00 0.00 4.61
176 177 0.179081 GCAACCACCGTAGATCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
178 179 1.204941 ACTGCAACCACCGTAGATCTC 59.795 52.381 0.00 0.00 0.00 2.75
179 180 1.066858 CACTGCAACCACCGTAGATCT 60.067 52.381 0.00 0.00 0.00 2.75
180 181 1.359848 CACTGCAACCACCGTAGATC 58.640 55.000 0.00 0.00 0.00 2.75
181 182 0.036388 CCACTGCAACCACCGTAGAT 60.036 55.000 0.00 0.00 0.00 1.98
183 184 0.949105 GACCACTGCAACCACCGTAG 60.949 60.000 0.00 0.00 0.00 3.51
184 185 1.070105 GACCACTGCAACCACCGTA 59.930 57.895 0.00 0.00 0.00 4.02
185 186 2.203153 GACCACTGCAACCACCGT 60.203 61.111 0.00 0.00 0.00 4.83
186 187 3.345808 CGACCACTGCAACCACCG 61.346 66.667 0.00 0.00 0.00 4.94
187 188 3.660111 GCGACCACTGCAACCACC 61.660 66.667 0.00 0.00 0.00 4.61
188 189 4.012895 CGCGACCACTGCAACCAC 62.013 66.667 0.00 0.00 0.00 4.16
189 190 4.228567 TCGCGACCACTGCAACCA 62.229 61.111 3.71 0.00 0.00 3.67
190 191 3.414700 CTCGCGACCACTGCAACC 61.415 66.667 3.71 0.00 0.00 3.77
191 192 3.414700 CCTCGCGACCACTGCAAC 61.415 66.667 3.71 0.00 0.00 4.17
195 196 1.507141 AAAAAGCCTCGCGACCACTG 61.507 55.000 3.71 0.00 0.00 3.66
197 198 1.206831 GAAAAAGCCTCGCGACCAC 59.793 57.895 3.71 0.00 0.00 4.16
198 199 2.314647 CGAAAAAGCCTCGCGACCA 61.315 57.895 3.71 0.00 0.00 4.02
199 200 1.838568 AACGAAAAAGCCTCGCGACC 61.839 55.000 3.71 0.00 39.97 4.79
201 202 0.658897 AAAACGAAAAAGCCTCGCGA 59.341 45.000 9.26 9.26 39.97 5.87
202 203 1.187055 CAAAAACGAAAAAGCCTCGCG 59.813 47.619 0.00 0.00 39.97 5.87
204 205 2.462565 CGACAAAAACGAAAAAGCCTCG 59.537 45.455 0.00 0.00 42.06 4.63
205 206 3.687200 TCGACAAAAACGAAAAAGCCTC 58.313 40.909 0.00 0.00 36.84 4.70
206 207 3.768468 TCGACAAAAACGAAAAAGCCT 57.232 38.095 0.00 0.00 36.84 4.58
207 208 3.424198 GGATCGACAAAAACGAAAAAGCC 59.576 43.478 0.00 0.00 42.80 4.35
209 210 3.117346 GCGGATCGACAAAAACGAAAAAG 59.883 43.478 0.00 0.00 42.80 2.27
210 211 3.037324 GCGGATCGACAAAAACGAAAAA 58.963 40.909 0.00 0.00 42.80 1.94
211 212 2.602694 GGCGGATCGACAAAAACGAAAA 60.603 45.455 0.00 0.00 42.80 2.29
212 213 1.069771 GGCGGATCGACAAAAACGAAA 60.070 47.619 0.00 0.00 42.80 3.46
213 214 0.513820 GGCGGATCGACAAAAACGAA 59.486 50.000 0.00 0.00 42.80 3.85
216 217 0.236449 AACGGCGGATCGACAAAAAC 59.764 50.000 13.24 0.00 32.52 2.43
217 218 0.236187 CAACGGCGGATCGACAAAAA 59.764 50.000 13.24 0.00 32.52 1.94
218 219 0.881159 ACAACGGCGGATCGACAAAA 60.881 50.000 13.24 0.00 32.52 2.44
219 220 1.286354 GACAACGGCGGATCGACAAA 61.286 55.000 13.24 0.00 32.52 2.83
220 221 1.735198 GACAACGGCGGATCGACAA 60.735 57.895 13.24 0.00 32.52 3.18
221 222 2.126228 GACAACGGCGGATCGACA 60.126 61.111 13.24 0.00 32.52 4.35
222 223 3.245315 CGACAACGGCGGATCGAC 61.245 66.667 20.25 3.07 36.70 4.20
223 224 3.433453 TCGACAACGGCGGATCGA 61.433 61.111 22.48 22.48 41.04 3.59
230 231 0.438830 GAACAGATGTCGACAACGGC 59.561 55.000 24.13 12.20 44.90 5.68
231 232 1.068474 GGAACAGATGTCGACAACGG 58.932 55.000 24.13 22.31 40.21 4.44
232 233 2.065993 AGGAACAGATGTCGACAACG 57.934 50.000 24.13 17.37 41.26 4.10
233 234 4.813296 AAAAGGAACAGATGTCGACAAC 57.187 40.909 24.13 20.44 0.00 3.32
234 235 7.504924 AAATAAAAGGAACAGATGTCGACAA 57.495 32.000 24.13 6.23 0.00 3.18
236 237 7.807680 AGAAAATAAAAGGAACAGATGTCGAC 58.192 34.615 9.11 9.11 0.00 4.20
237 238 7.878127 AGAGAAAATAAAAGGAACAGATGTCGA 59.122 33.333 0.00 0.00 0.00 4.20
238 239 8.034058 AGAGAAAATAAAAGGAACAGATGTCG 57.966 34.615 0.00 0.00 0.00 4.35
241 242 9.334693 CGAAAGAGAAAATAAAAGGAACAGATG 57.665 33.333 0.00 0.00 0.00 2.90
242 243 9.067986 ACGAAAGAGAAAATAAAAGGAACAGAT 57.932 29.630 0.00 0.00 0.00 2.90
243 244 8.446599 ACGAAAGAGAAAATAAAAGGAACAGA 57.553 30.769 0.00 0.00 0.00 3.41
244 245 9.516314 AAACGAAAGAGAAAATAAAAGGAACAG 57.484 29.630 0.00 0.00 0.00 3.16
245 246 9.863845 AAAACGAAAGAGAAAATAAAAGGAACA 57.136 25.926 0.00 0.00 0.00 3.18
273 274 3.173668 AGCAGTACAGACACGTCAAAA 57.826 42.857 0.00 0.00 0.00 2.44
274 275 2.882927 AGCAGTACAGACACGTCAAA 57.117 45.000 0.00 0.00 0.00 2.69
275 276 2.545113 GGAAGCAGTACAGACACGTCAA 60.545 50.000 0.00 0.00 0.00 3.18
276 277 1.000607 GGAAGCAGTACAGACACGTCA 60.001 52.381 0.00 0.00 0.00 4.35
278 279 0.039437 CGGAAGCAGTACAGACACGT 60.039 55.000 0.00 0.00 0.00 4.49
279 280 2.725644 CGGAAGCAGTACAGACACG 58.274 57.895 0.00 0.00 0.00 4.49
292 293 4.250116 ACTATAGATGCTGAAGCGGAAG 57.750 45.455 6.78 0.00 45.83 3.46
293 294 4.371786 CAACTATAGATGCTGAAGCGGAA 58.628 43.478 6.78 0.00 45.83 4.30
294 295 3.243873 CCAACTATAGATGCTGAAGCGGA 60.244 47.826 6.78 0.00 45.83 5.54
296 297 3.722147 ACCAACTATAGATGCTGAAGCG 58.278 45.455 6.78 0.00 45.83 4.68
298 299 7.386299 GGATACAACCAACTATAGATGCTGAAG 59.614 40.741 6.78 0.00 0.00 3.02
299 300 7.217200 GGATACAACCAACTATAGATGCTGAA 58.783 38.462 6.78 0.00 0.00 3.02
300 301 6.516693 CGGATACAACCAACTATAGATGCTGA 60.517 42.308 6.78 0.00 0.00 4.26
301 302 5.635280 CGGATACAACCAACTATAGATGCTG 59.365 44.000 6.78 7.62 0.00 4.41
302 303 5.304614 ACGGATACAACCAACTATAGATGCT 59.695 40.000 6.78 0.00 0.00 3.79
303 304 5.539048 ACGGATACAACCAACTATAGATGC 58.461 41.667 6.78 0.00 0.00 3.91
304 305 6.423905 CCAACGGATACAACCAACTATAGATG 59.576 42.308 6.78 4.73 0.00 2.90
305 306 6.099269 ACCAACGGATACAACCAACTATAGAT 59.901 38.462 6.78 0.00 0.00 1.98
306 307 5.422970 ACCAACGGATACAACCAACTATAGA 59.577 40.000 6.78 0.00 0.00 1.98
307 308 5.667466 ACCAACGGATACAACCAACTATAG 58.333 41.667 0.00 0.00 0.00 1.31
308 309 5.680594 ACCAACGGATACAACCAACTATA 57.319 39.130 0.00 0.00 0.00 1.31
310 311 4.066490 CAACCAACGGATACAACCAACTA 58.934 43.478 0.00 0.00 0.00 2.24
311 312 2.882137 CAACCAACGGATACAACCAACT 59.118 45.455 0.00 0.00 0.00 3.16
312 313 2.606065 GCAACCAACGGATACAACCAAC 60.606 50.000 0.00 0.00 0.00 3.77
314 315 1.202830 AGCAACCAACGGATACAACCA 60.203 47.619 0.00 0.00 0.00 3.67
315 316 1.530323 AGCAACCAACGGATACAACC 58.470 50.000 0.00 0.00 0.00 3.77
316 317 3.243267 ACAAAGCAACCAACGGATACAAC 60.243 43.478 0.00 0.00 0.00 3.32
318 319 2.577700 ACAAAGCAACCAACGGATACA 58.422 42.857 0.00 0.00 0.00 2.29
319 320 4.957759 ATACAAAGCAACCAACGGATAC 57.042 40.909 0.00 0.00 0.00 2.24
320 321 5.938710 TGTAATACAAAGCAACCAACGGATA 59.061 36.000 0.00 0.00 0.00 2.59
334 335 3.436577 TCCCCCGCTTTGTAATACAAA 57.563 42.857 16.57 16.57 44.91 2.83
335 336 3.436577 TTCCCCCGCTTTGTAATACAA 57.563 42.857 1.08 1.08 36.11 2.41
336 337 3.083293 GTTTCCCCCGCTTTGTAATACA 58.917 45.455 0.00 0.00 0.00 2.29
337 338 2.424601 GGTTTCCCCCGCTTTGTAATAC 59.575 50.000 0.00 0.00 0.00 1.89
338 339 2.621147 GGGTTTCCCCCGCTTTGTAATA 60.621 50.000 0.00 0.00 45.80 0.98
339 340 1.552578 GGTTTCCCCCGCTTTGTAAT 58.447 50.000 0.00 0.00 0.00 1.89
340 341 0.540133 GGGTTTCCCCCGCTTTGTAA 60.540 55.000 0.00 0.00 45.80 2.41
341 342 1.075305 GGGTTTCCCCCGCTTTGTA 59.925 57.895 0.00 0.00 45.80 2.41
342 343 2.203582 GGGTTTCCCCCGCTTTGT 60.204 61.111 0.00 0.00 45.80 2.83
352 353 7.121611 TGGATTTTATAACGAGAAAGGGTTTCC 59.878 37.037 0.00 0.00 40.54 3.13
353 354 7.966753 GTGGATTTTATAACGAGAAAGGGTTTC 59.033 37.037 0.00 0.00 39.96 2.78
354 355 7.449086 TGTGGATTTTATAACGAGAAAGGGTTT 59.551 33.333 0.00 0.00 0.00 3.27
356 357 6.373495 GTGTGGATTTTATAACGAGAAAGGGT 59.627 38.462 0.00 0.00 0.00 4.34
357 358 6.183360 GGTGTGGATTTTATAACGAGAAAGGG 60.183 42.308 0.00 0.00 0.00 3.95
358 359 6.456449 CGGTGTGGATTTTATAACGAGAAAGG 60.456 42.308 0.00 0.00 0.00 3.11
360 361 5.352016 CCGGTGTGGATTTTATAACGAGAAA 59.648 40.000 0.00 0.00 42.00 2.52
361 362 4.871557 CCGGTGTGGATTTTATAACGAGAA 59.128 41.667 0.00 0.00 42.00 2.87
362 363 4.081531 ACCGGTGTGGATTTTATAACGAGA 60.082 41.667 6.12 0.00 42.00 4.04
364 365 4.183101 GACCGGTGTGGATTTTATAACGA 58.817 43.478 14.63 0.00 42.00 3.85
365 366 3.000523 CGACCGGTGTGGATTTTATAACG 59.999 47.826 14.63 0.00 42.00 3.18
366 367 3.934579 ACGACCGGTGTGGATTTTATAAC 59.065 43.478 14.63 0.00 42.00 1.89
367 368 4.205065 ACGACCGGTGTGGATTTTATAA 57.795 40.909 14.63 0.00 42.00 0.98
368 369 3.891422 ACGACCGGTGTGGATTTTATA 57.109 42.857 14.63 0.00 42.00 0.98
370 371 2.547299 AACGACCGGTGTGGATTTTA 57.453 45.000 14.63 0.00 42.00 1.52
371 372 2.547299 TAACGACCGGTGTGGATTTT 57.453 45.000 14.63 0.00 42.00 1.82
372 373 2.027929 TGATAACGACCGGTGTGGATTT 60.028 45.455 14.63 0.00 42.00 2.17
373 374 1.551430 TGATAACGACCGGTGTGGATT 59.449 47.619 14.63 0.73 42.00 3.01
386 5126 4.549599 GCAACTTCGTGTTCATTGATAACG 59.450 41.667 12.84 12.84 36.63 3.18
416 5156 3.440415 CCTTTTTCTCCGCCGGCC 61.440 66.667 23.46 2.84 0.00 6.13
446 5186 4.079446 CACGATTTGTGCCCTGGT 57.921 55.556 0.00 0.00 42.70 4.00
466 5207 6.682863 CAGTCGATTTATTCAACGTTTGATCC 59.317 38.462 0.00 0.00 39.84 3.36
569 5310 1.566018 GAACAGTGCACTACGCCACC 61.566 60.000 21.20 1.06 41.33 4.61
575 5316 1.328439 CGAGTCGAACAGTGCACTAC 58.672 55.000 21.20 13.92 0.00 2.73
578 5319 0.594028 TCACGAGTCGAACAGTGCAC 60.594 55.000 21.50 9.40 34.84 4.57
636 5377 3.688159 CTTGGCTGGCAAGTGGGC 61.688 66.667 29.52 0.00 43.73 5.36
677 5421 3.893753 TTCCTCCTGAATTTTGGGACA 57.106 42.857 0.00 0.00 0.00 4.02
791 5535 1.812922 CACCATGAGAGCGACCTGC 60.813 63.158 0.00 0.00 46.98 4.85
792 5536 0.459237 GTCACCATGAGAGCGACCTG 60.459 60.000 0.00 0.00 0.00 4.00
793 5537 1.608717 GGTCACCATGAGAGCGACCT 61.609 60.000 0.00 0.00 42.37 3.85
794 5538 1.153549 GGTCACCATGAGAGCGACC 60.154 63.158 0.00 0.00 39.42 4.79
796 5540 0.461548 GATGGTCACCATGAGAGCGA 59.538 55.000 16.24 0.00 45.26 4.93
797 5541 0.531532 GGATGGTCACCATGAGAGCG 60.532 60.000 16.24 0.00 45.26 5.03
798 5542 0.835941 AGGATGGTCACCATGAGAGC 59.164 55.000 16.24 0.00 45.26 4.09
801 5557 1.133976 GGGAAGGATGGTCACCATGAG 60.134 57.143 16.24 0.00 45.26 2.90
810 5566 0.919710 GGCTAACAGGGAAGGATGGT 59.080 55.000 0.00 0.00 0.00 3.55
824 5580 3.081061 CCATTTGTGCTGTACTGGCTAA 58.919 45.455 11.40 5.67 0.00 3.09
832 5946 3.329520 AGGAACCTACCATTTGTGCTGTA 59.670 43.478 0.00 0.00 0.00 2.74
833 5947 2.108250 AGGAACCTACCATTTGTGCTGT 59.892 45.455 0.00 0.00 0.00 4.40
834 5948 2.795329 AGGAACCTACCATTTGTGCTG 58.205 47.619 0.00 0.00 0.00 4.41
835 5949 3.157087 CAAGGAACCTACCATTTGTGCT 58.843 45.455 0.00 0.00 0.00 4.40
836 5950 2.352715 GCAAGGAACCTACCATTTGTGC 60.353 50.000 0.00 0.00 0.00 4.57
837 5951 2.890311 TGCAAGGAACCTACCATTTGTG 59.110 45.455 0.00 0.00 0.00 3.33
862 5977 5.571791 AAAGTTTAGCCTGGGTTACTGTA 57.428 39.130 2.65 0.00 0.00 2.74
883 5998 9.715121 CACAAGGATTAGGTGTACTAAAGTTAA 57.285 33.333 0.00 0.00 44.39 2.01
886 6001 7.312415 ACACAAGGATTAGGTGTACTAAAGT 57.688 36.000 0.00 0.00 44.39 2.66
887 6002 7.360946 GCAACACAAGGATTAGGTGTACTAAAG 60.361 40.741 0.00 0.00 44.40 1.85
890 6022 5.247564 AGCAACACAAGGATTAGGTGTACTA 59.752 40.000 0.00 0.00 44.40 1.82
917 6049 0.532862 AGGCCACAAGTCACAACTCG 60.533 55.000 5.01 0.00 33.48 4.18
920 6052 0.381801 CACAGGCCACAAGTCACAAC 59.618 55.000 5.01 0.00 0.00 3.32
922 6054 0.833949 TACACAGGCCACAAGTCACA 59.166 50.000 5.01 0.00 0.00 3.58
923 6055 1.226746 GTACACAGGCCACAAGTCAC 58.773 55.000 5.01 0.00 0.00 3.67
924 6056 0.833949 TGTACACAGGCCACAAGTCA 59.166 50.000 5.01 0.00 0.00 3.41
925 6057 1.873591 CTTGTACACAGGCCACAAGTC 59.126 52.381 19.78 2.19 42.61 3.01
926 6058 1.967319 CTTGTACACAGGCCACAAGT 58.033 50.000 19.78 9.41 42.61 3.16
928 6060 1.674359 CACTTGTACACAGGCCACAA 58.326 50.000 5.01 5.35 0.00 3.33
929 6061 0.817634 GCACTTGTACACAGGCCACA 60.818 55.000 5.01 0.00 0.00 4.17
930 6062 1.841663 CGCACTTGTACACAGGCCAC 61.842 60.000 5.01 0.00 0.00 5.01
931 6063 1.596752 CGCACTTGTACACAGGCCA 60.597 57.895 5.01 0.00 0.00 5.36
932 6064 2.325082 CCGCACTTGTACACAGGCC 61.325 63.158 0.00 0.00 0.00 5.19
933 6065 2.966309 GCCGCACTTGTACACAGGC 61.966 63.158 0.00 2.72 36.08 4.85
934 6066 2.667318 CGCCGCACTTGTACACAGG 61.667 63.158 0.00 0.00 0.00 4.00
935 6067 2.667318 CCGCCGCACTTGTACACAG 61.667 63.158 0.00 0.00 0.00 3.66
966 6098 3.036084 ACGCTTGTCGCTTGGTCG 61.036 61.111 0.00 0.00 43.23 4.79
1008 6140 1.406539 AGCAGCAACAACAACTTCCTG 59.593 47.619 0.00 0.00 0.00 3.86
1010 6142 1.843992 CAGCAGCAACAACAACTTCC 58.156 50.000 0.00 0.00 0.00 3.46
1011 6143 1.202336 AGCAGCAGCAACAACAACTTC 60.202 47.619 3.17 0.00 45.49 3.01
1096 6244 2.936829 CTTGCTATGCCGTCGAGCGA 62.937 60.000 8.63 0.00 44.77 4.93
1236 6390 3.356639 GAGCTCCGACACGATGGCA 62.357 63.158 0.87 0.00 0.00 4.92
1893 7069 2.032528 CGGAGCAACAAGAGGCCA 59.967 61.111 5.01 0.00 0.00 5.36
2184 7375 2.767536 GCAATAGCCGAGCAGTTGA 58.232 52.632 13.34 0.00 30.61 3.18
2208 7399 0.038166 CCAGCAACAGCTCCCCTTTA 59.962 55.000 0.00 0.00 36.19 1.85
2233 7424 4.728772 AGGCTGCTATTTGGCATGTAATA 58.271 39.130 0.00 0.00 41.63 0.98
2952 8189 3.188786 GACATGGTGGCGACGCTC 61.189 66.667 20.77 12.86 41.78 5.03
2996 8233 2.116125 GTTGACCAGCTTGCCCCT 59.884 61.111 0.00 0.00 0.00 4.79
3008 8245 2.433868 TCTTCCTAGCACGTGTTGAC 57.566 50.000 18.38 0.00 0.00 3.18
3018 8255 6.935771 ACATTCATCAGATCAATCTTCCTAGC 59.064 38.462 0.00 0.00 34.22 3.42
3053 8291 4.718940 TCAGATCTAAACATCACAGCGA 57.281 40.909 0.00 0.00 0.00 4.93
3134 8395 8.871125 TCCAGTATTCCAAGAAATCCTATACTC 58.129 37.037 0.00 0.00 0.00 2.59
3158 8419 7.834681 ACTCATAATTCTTCTTTTAACCCCTCC 59.165 37.037 0.00 0.00 0.00 4.30
3208 8703 8.907222 AAAATAATTCCAAACTGCAATCTTGT 57.093 26.923 0.00 0.00 0.00 3.16
3233 8728 6.291377 AGATTTCAGACTGCTCTTGTGTAAA 58.709 36.000 0.00 0.00 0.00 2.01
3234 8729 5.858381 AGATTTCAGACTGCTCTTGTGTAA 58.142 37.500 0.00 0.00 0.00 2.41
3235 8730 5.011023 TGAGATTTCAGACTGCTCTTGTGTA 59.989 40.000 0.00 0.00 0.00 2.90
3240 8735 5.226194 AGTTGAGATTTCAGACTGCTCTT 57.774 39.130 0.00 0.00 34.15 2.85
3510 9050 4.892934 AGAACATTTTGTTGTAGCTTGGGA 59.107 37.500 0.00 0.00 41.28 4.37
3524 9064 6.945218 AGCTCAGTCAGATAGAGAACATTTT 58.055 36.000 6.32 0.00 0.00 1.82
3754 9528 5.060506 TCAGATGTTGAACATGGTTACGTT 58.939 37.500 16.52 0.00 39.27 3.99
3879 10771 5.068987 CCCAAATCCTGACTTCAACAAAGAA 59.931 40.000 0.00 0.00 38.44 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.