Multiple sequence alignment - TraesCS1B01G152700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G152700 chr1B 100.000 4389 0 0 1 4389 246452072 246456460 0.000000e+00 8106.0
1 TraesCS1B01G152700 chr1B 92.876 379 27 0 1 379 558392845 558392467 6.420000e-153 551.0
2 TraesCS1B01G152700 chr1D 96.463 2940 62 12 493 3410 127502434 127505353 0.000000e+00 4815.0
3 TraesCS1B01G152700 chr1D 89.335 647 62 4 3409 4049 472001467 472002112 0.000000e+00 806.0
4 TraesCS1B01G152700 chr1D 88.473 668 65 9 3392 4049 415985026 415984361 0.000000e+00 797.0
5 TraesCS1B01G152700 chr1D 89.198 648 56 7 3411 4049 475278008 475277366 0.000000e+00 797.0
6 TraesCS1B01G152700 chr1D 92.838 377 27 0 1 377 478042206 478041830 8.300000e-152 547.0
7 TraesCS1B01G152700 chr1D 91.414 198 8 4 4171 4363 127505418 127505611 3.370000e-66 263.0
8 TraesCS1B01G152700 chr1D 78.320 369 62 11 2665 3030 307832764 307832411 5.710000e-54 222.0
9 TraesCS1B01G152700 chr1D 93.684 95 5 1 4057 4150 127505329 127505423 1.650000e-29 141.0
10 TraesCS1B01G152700 chr1A 96.206 2926 86 9 490 3397 186210892 186213810 0.000000e+00 4765.0
11 TraesCS1B01G152700 chr1A 89.302 645 63 4 3407 4046 584944963 584945606 0.000000e+00 804.0
12 TraesCS1B01G152700 chr1A 89.236 641 63 4 3411 4046 584886965 584886326 0.000000e+00 797.0
13 TraesCS1B01G152700 chr1A 90.476 315 21 4 4057 4362 186213799 186214113 1.470000e-109 407.0
14 TraesCS1B01G152700 chr1A 76.559 465 95 13 1980 2438 387029834 387029378 4.390000e-60 243.0
15 TraesCS1B01G152700 chr1A 78.261 368 64 10 2665 3030 387029190 387028837 5.710000e-54 222.0
16 TraesCS1B01G152700 chr4D 89.522 649 60 5 3407 4049 47728707 47729353 0.000000e+00 815.0
17 TraesCS1B01G152700 chr6D 89.352 648 63 3 3409 4050 14616166 14615519 0.000000e+00 809.0
18 TraesCS1B01G152700 chr6D 78.328 323 66 4 1891 2211 317005276 317005596 5.750000e-49 206.0
19 TraesCS1B01G152700 chr6D 82.500 80 8 4 1884 1960 440411621 440411545 1.020000e-06 65.8
20 TraesCS1B01G152700 chrUn 89.060 649 63 5 3407 4048 83928410 83929057 0.000000e+00 798.0
21 TraesCS1B01G152700 chrUn 93.085 376 26 0 2 377 184579717 184580092 6.420000e-153 551.0
22 TraesCS1B01G152700 chrUn 93.085 376 26 0 2 377 184589524 184589899 6.420000e-153 551.0
23 TraesCS1B01G152700 chrUn 93.085 376 26 0 2 377 419814039 419813664 6.420000e-153 551.0
24 TraesCS1B01G152700 chr7B 88.957 652 65 4 3405 4049 138475482 138474831 0.000000e+00 798.0
25 TraesCS1B01G152700 chr7B 91.209 91 8 0 400 490 38520964 38520874 1.660000e-24 124.0
26 TraesCS1B01G152700 chr6B 94.164 377 21 1 1 377 93025156 93024781 1.370000e-159 573.0
27 TraesCS1B01G152700 chr6B 93.899 377 22 1 1 377 93110728 93110353 6.370000e-158 568.0
28 TraesCS1B01G152700 chr6B 79.643 280 53 4 1894 2171 507594316 507594039 9.630000e-47 198.0
29 TraesCS1B01G152700 chr6B 91.209 91 7 1 403 492 472706316 472706406 5.960000e-24 122.0
30 TraesCS1B01G152700 chr6B 89.362 94 9 1 400 492 25639190 25639283 2.770000e-22 117.0
31 TraesCS1B01G152700 chr6B 89.362 94 9 1 400 492 25656588 25656681 2.770000e-22 117.0
32 TraesCS1B01G152700 chr3B 93.438 381 24 1 1 381 90095651 90095272 8.240000e-157 564.0
33 TraesCS1B01G152700 chr3B 93.085 376 26 0 2 377 829932500 829932875 6.420000e-153 551.0
34 TraesCS1B01G152700 chr3B 83.180 434 58 5 2652 3085 194759220 194759638 2.480000e-102 383.0
35 TraesCS1B01G152700 chr3B 85.475 179 18 6 4168 4339 665246637 665246814 3.490000e-41 180.0
36 TraesCS1B01G152700 chr3B 89.474 95 9 1 400 494 830054034 830054127 7.710000e-23 119.0
37 TraesCS1B01G152700 chr5B 81.431 657 92 23 1820 2455 635194098 635194745 1.090000e-140 510.0
38 TraesCS1B01G152700 chr5B 83.721 387 46 10 2654 3039 635194917 635195287 2.510000e-92 350.0
39 TraesCS1B01G152700 chr5B 80.916 262 36 11 4132 4389 230784266 230784517 1.250000e-45 195.0
40 TraesCS1B01G152700 chr5B 92.222 90 7 0 403 492 686474832 686474743 1.280000e-25 128.0
41 TraesCS1B01G152700 chr5A 86.146 397 50 5 1820 2212 632835983 632836378 1.460000e-114 424.0
42 TraesCS1B01G152700 chr5A 83.673 392 47 10 2649 3039 632836821 632837196 1.940000e-93 353.0
43 TraesCS1B01G152700 chr5D 85.539 408 48 7 1814 2211 505215138 505215544 2.440000e-112 416.0
44 TraesCS1B01G152700 chr5D 83.721 387 46 10 2654 3039 505215981 505216351 2.510000e-92 350.0
45 TraesCS1B01G152700 chr5D 91.011 89 8 0 401 489 24717660 24717748 2.140000e-23 121.0
46 TraesCS1B01G152700 chr3D 82.719 434 60 5 2652 3085 136402778 136403196 5.360000e-99 372.0
47 TraesCS1B01G152700 chr6A 76.780 323 71 4 1891 2211 454647700 454648020 1.250000e-40 178.0
48 TraesCS1B01G152700 chr7D 91.209 91 8 0 400 490 55691848 55691938 1.660000e-24 124.0
49 TraesCS1B01G152700 chr7D 91.111 90 8 0 400 489 403643412 403643501 5.960000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G152700 chr1B 246452072 246456460 4388 False 8106.000000 8106 100.000000 1 4389 1 chr1B.!!$F1 4388
1 TraesCS1B01G152700 chr1D 127502434 127505611 3177 False 1739.666667 4815 93.853667 493 4363 3 chr1D.!!$F2 3870
2 TraesCS1B01G152700 chr1D 472001467 472002112 645 False 806.000000 806 89.335000 3409 4049 1 chr1D.!!$F1 640
3 TraesCS1B01G152700 chr1D 415984361 415985026 665 True 797.000000 797 88.473000 3392 4049 1 chr1D.!!$R2 657
4 TraesCS1B01G152700 chr1D 475277366 475278008 642 True 797.000000 797 89.198000 3411 4049 1 chr1D.!!$R3 638
5 TraesCS1B01G152700 chr1A 186210892 186214113 3221 False 2586.000000 4765 93.341000 490 4362 2 chr1A.!!$F2 3872
6 TraesCS1B01G152700 chr1A 584944963 584945606 643 False 804.000000 804 89.302000 3407 4046 1 chr1A.!!$F1 639
7 TraesCS1B01G152700 chr1A 584886326 584886965 639 True 797.000000 797 89.236000 3411 4046 1 chr1A.!!$R1 635
8 TraesCS1B01G152700 chr1A 387028837 387029834 997 True 232.500000 243 77.410000 1980 3030 2 chr1A.!!$R2 1050
9 TraesCS1B01G152700 chr4D 47728707 47729353 646 False 815.000000 815 89.522000 3407 4049 1 chr4D.!!$F1 642
10 TraesCS1B01G152700 chr6D 14615519 14616166 647 True 809.000000 809 89.352000 3409 4050 1 chr6D.!!$R1 641
11 TraesCS1B01G152700 chrUn 83928410 83929057 647 False 798.000000 798 89.060000 3407 4048 1 chrUn.!!$F1 641
12 TraesCS1B01G152700 chr7B 138474831 138475482 651 True 798.000000 798 88.957000 3405 4049 1 chr7B.!!$R2 644
13 TraesCS1B01G152700 chr5B 635194098 635195287 1189 False 430.000000 510 82.576000 1820 3039 2 chr5B.!!$F2 1219
14 TraesCS1B01G152700 chr5A 632835983 632837196 1213 False 388.500000 424 84.909500 1820 3039 2 chr5A.!!$F1 1219
15 TraesCS1B01G152700 chr5D 505215138 505216351 1213 False 383.000000 416 84.630000 1814 3039 2 chr5D.!!$F2 1225

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 469 0.107214 GCCTCATGATCCGGGACAAA 60.107 55.0 0.0 0.0 0.0 2.83 F
1599 1618 0.185901 AAGCCCAAGAACAAGCCAGA 59.814 50.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1978 2006 0.612744 TGTCCATCACCTTCATCGCA 59.387 50.0 0.0 0.0 0.00 5.10 R
3596 3837 0.171903 GGCCTTAGCACGACGACTTA 59.828 55.0 0.0 0.0 42.56 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.753897 GTAATTGTTTTCTTTGTCTGGCAG 57.246 37.500 8.58 8.58 0.00 4.85
24 25 3.799281 TTGTTTTCTTTGTCTGGCAGG 57.201 42.857 15.73 0.00 0.00 4.85
25 26 2.031120 TGTTTTCTTTGTCTGGCAGGG 58.969 47.619 15.73 0.70 0.00 4.45
26 27 2.031870 GTTTTCTTTGTCTGGCAGGGT 58.968 47.619 15.73 0.00 0.00 4.34
27 28 2.430694 GTTTTCTTTGTCTGGCAGGGTT 59.569 45.455 15.73 0.00 0.00 4.11
28 29 2.452600 TTCTTTGTCTGGCAGGGTTT 57.547 45.000 15.73 0.00 0.00 3.27
29 30 1.691196 TCTTTGTCTGGCAGGGTTTG 58.309 50.000 15.73 3.18 0.00 2.93
30 31 0.675633 CTTTGTCTGGCAGGGTTTGG 59.324 55.000 15.73 0.00 0.00 3.28
31 32 0.260230 TTTGTCTGGCAGGGTTTGGA 59.740 50.000 15.73 0.00 0.00 3.53
32 33 0.260230 TTGTCTGGCAGGGTTTGGAA 59.740 50.000 15.73 0.00 0.00 3.53
33 34 0.260230 TGTCTGGCAGGGTTTGGAAA 59.740 50.000 15.73 0.00 0.00 3.13
34 35 1.342474 TGTCTGGCAGGGTTTGGAAAA 60.342 47.619 15.73 0.00 0.00 2.29
35 36 1.760029 GTCTGGCAGGGTTTGGAAAAA 59.240 47.619 15.73 0.00 0.00 1.94
36 37 2.038659 TCTGGCAGGGTTTGGAAAAAG 58.961 47.619 15.73 0.00 0.00 2.27
37 38 1.762370 CTGGCAGGGTTTGGAAAAAGT 59.238 47.619 6.61 0.00 0.00 2.66
38 39 2.170397 CTGGCAGGGTTTGGAAAAAGTT 59.830 45.455 6.61 0.00 0.00 2.66
39 40 2.169561 TGGCAGGGTTTGGAAAAAGTTC 59.830 45.455 0.00 0.00 0.00 3.01
40 41 2.169561 GGCAGGGTTTGGAAAAAGTTCA 59.830 45.455 0.00 0.00 35.25 3.18
41 42 3.194861 GCAGGGTTTGGAAAAAGTTCAC 58.805 45.455 0.00 0.00 35.25 3.18
42 43 3.792401 CAGGGTTTGGAAAAAGTTCACC 58.208 45.455 0.00 0.00 35.25 4.02
43 44 2.429250 AGGGTTTGGAAAAAGTTCACCG 59.571 45.455 0.00 0.00 35.25 4.94
44 45 2.198406 GGTTTGGAAAAAGTTCACCGC 58.802 47.619 0.00 0.00 35.25 5.68
45 46 2.417515 GGTTTGGAAAAAGTTCACCGCA 60.418 45.455 0.00 0.00 35.25 5.69
46 47 2.857748 GTTTGGAAAAAGTTCACCGCAG 59.142 45.455 0.00 0.00 35.25 5.18
47 48 2.045561 TGGAAAAAGTTCACCGCAGA 57.954 45.000 0.00 0.00 35.25 4.26
48 49 2.370349 TGGAAAAAGTTCACCGCAGAA 58.630 42.857 0.00 0.00 35.25 3.02
49 50 2.755655 TGGAAAAAGTTCACCGCAGAAA 59.244 40.909 0.00 0.00 35.25 2.52
50 51 3.113322 GGAAAAAGTTCACCGCAGAAAC 58.887 45.455 0.00 0.00 35.25 2.78
51 52 3.181490 GGAAAAAGTTCACCGCAGAAACT 60.181 43.478 0.00 0.00 35.25 2.66
52 53 3.692791 AAAAGTTCACCGCAGAAACTC 57.307 42.857 0.00 0.00 0.00 3.01
53 54 1.594331 AAGTTCACCGCAGAAACTCC 58.406 50.000 0.00 0.00 0.00 3.85
54 55 0.600255 AGTTCACCGCAGAAACTCCG 60.600 55.000 0.00 0.00 0.00 4.63
55 56 1.301401 TTCACCGCAGAAACTCCGG 60.301 57.895 0.00 0.00 46.97 5.14
56 57 2.725203 TTCACCGCAGAAACTCCGGG 62.725 60.000 0.00 0.00 45.93 5.73
57 58 2.920912 ACCGCAGAAACTCCGGGA 60.921 61.111 0.00 0.00 45.93 5.14
58 59 2.434359 CCGCAGAAACTCCGGGAC 60.434 66.667 0.00 0.00 38.42 4.46
59 60 2.657237 CGCAGAAACTCCGGGACT 59.343 61.111 0.00 0.00 0.00 3.85
60 61 1.738099 CGCAGAAACTCCGGGACTG 60.738 63.158 0.00 7.77 0.00 3.51
61 62 1.371558 GCAGAAACTCCGGGACTGT 59.628 57.895 0.00 0.00 0.00 3.55
62 63 0.670854 GCAGAAACTCCGGGACTGTC 60.671 60.000 0.00 0.00 0.00 3.51
63 64 0.388649 CAGAAACTCCGGGACTGTCG 60.389 60.000 0.00 0.00 0.00 4.35
65 66 2.502692 GAAACTCCGGGACTGTCGGG 62.503 65.000 0.00 8.75 46.78 5.14
72 73 3.003763 GGACTGTCGGGGGAGCTT 61.004 66.667 1.07 0.00 0.00 3.74
73 74 2.579738 GACTGTCGGGGGAGCTTC 59.420 66.667 0.00 0.00 0.00 3.86
74 75 3.003763 ACTGTCGGGGGAGCTTCC 61.004 66.667 0.70 0.70 35.23 3.46
75 76 3.003173 CTGTCGGGGGAGCTTCCA 61.003 66.667 14.70 0.00 38.64 3.53
76 77 2.285368 TGTCGGGGGAGCTTCCAT 60.285 61.111 14.70 0.00 38.64 3.41
77 78 1.915078 CTGTCGGGGGAGCTTCCATT 61.915 60.000 14.70 0.00 38.64 3.16
78 79 1.303282 GTCGGGGGAGCTTCCATTT 59.697 57.895 14.70 0.00 38.64 2.32
79 80 0.544697 GTCGGGGGAGCTTCCATTTA 59.455 55.000 14.70 0.00 38.64 1.40
80 81 1.064979 GTCGGGGGAGCTTCCATTTAA 60.065 52.381 14.70 0.00 38.64 1.52
81 82 1.636519 TCGGGGGAGCTTCCATTTAAA 59.363 47.619 14.70 0.00 38.64 1.52
82 83 1.749063 CGGGGGAGCTTCCATTTAAAC 59.251 52.381 14.70 0.00 38.64 2.01
83 84 2.815158 GGGGGAGCTTCCATTTAAACA 58.185 47.619 14.70 0.00 38.64 2.83
84 85 2.496070 GGGGGAGCTTCCATTTAAACAC 59.504 50.000 14.70 0.00 38.64 3.32
85 86 2.496070 GGGGAGCTTCCATTTAAACACC 59.504 50.000 14.70 0.00 38.64 4.16
86 87 3.431415 GGGAGCTTCCATTTAAACACCT 58.569 45.455 6.02 0.00 38.64 4.00
87 88 3.193479 GGGAGCTTCCATTTAAACACCTG 59.807 47.826 6.02 0.00 38.64 4.00
88 89 4.079253 GGAGCTTCCATTTAAACACCTGA 58.921 43.478 0.00 0.00 36.28 3.86
89 90 4.522789 GGAGCTTCCATTTAAACACCTGAA 59.477 41.667 0.00 0.00 36.28 3.02
90 91 5.010617 GGAGCTTCCATTTAAACACCTGAAA 59.989 40.000 0.00 0.00 36.28 2.69
91 92 6.089249 AGCTTCCATTTAAACACCTGAAAG 57.911 37.500 0.00 0.00 0.00 2.62
92 93 5.598417 AGCTTCCATTTAAACACCTGAAAGT 59.402 36.000 0.00 0.00 0.00 2.66
93 94 6.775629 AGCTTCCATTTAAACACCTGAAAGTA 59.224 34.615 0.00 0.00 0.00 2.24
94 95 7.286775 AGCTTCCATTTAAACACCTGAAAGTAA 59.713 33.333 0.00 0.00 0.00 2.24
95 96 7.595130 GCTTCCATTTAAACACCTGAAAGTAAG 59.405 37.037 0.00 0.00 0.00 2.34
96 97 8.528044 TTCCATTTAAACACCTGAAAGTAAGT 57.472 30.769 0.00 0.00 0.00 2.24
97 98 9.629878 TTCCATTTAAACACCTGAAAGTAAGTA 57.370 29.630 0.00 0.00 0.00 2.24
98 99 9.059260 TCCATTTAAACACCTGAAAGTAAGTAC 57.941 33.333 0.00 0.00 0.00 2.73
99 100 9.063615 CCATTTAAACACCTGAAAGTAAGTACT 57.936 33.333 0.00 0.00 38.39 2.73
105 106 7.155655 ACACCTGAAAGTAAGTACTACTAGC 57.844 40.000 0.00 0.00 40.14 3.42
106 107 6.947158 ACACCTGAAAGTAAGTACTACTAGCT 59.053 38.462 0.00 0.00 40.14 3.32
107 108 8.105829 ACACCTGAAAGTAAGTACTACTAGCTA 58.894 37.037 0.00 0.00 40.14 3.32
108 109 8.614346 CACCTGAAAGTAAGTACTACTAGCTAG 58.386 40.741 19.44 19.44 40.14 3.42
109 110 8.328014 ACCTGAAAGTAAGTACTACTAGCTAGT 58.672 37.037 28.50 28.50 40.14 2.57
110 111 9.176460 CCTGAAAGTAAGTACTACTAGCTAGTT 57.824 37.037 30.40 16.68 40.14 2.24
112 113 9.171877 TGAAAGTAAGTACTACTAGCTAGTTCC 57.828 37.037 30.40 15.64 40.14 3.62
113 114 7.784633 AAGTAAGTACTACTAGCTAGTTCCG 57.215 40.000 30.40 20.30 40.14 4.30
114 115 6.883744 AGTAAGTACTACTAGCTAGTTCCGT 58.116 40.000 30.40 24.11 39.20 4.69
115 116 6.760770 AGTAAGTACTACTAGCTAGTTCCGTG 59.239 42.308 30.40 17.14 39.20 4.94
116 117 3.876320 AGTACTACTAGCTAGTTCCGTGC 59.124 47.826 30.40 24.30 36.95 5.34
117 118 1.669779 ACTACTAGCTAGTTCCGTGCG 59.330 52.381 30.40 12.85 37.73 5.34
118 119 1.669779 CTACTAGCTAGTTCCGTGCGT 59.330 52.381 30.40 6.71 37.73 5.24
119 120 0.450983 ACTAGCTAGTTCCGTGCGTC 59.549 55.000 20.95 0.00 31.13 5.19
120 121 0.733729 CTAGCTAGTTCCGTGCGTCT 59.266 55.000 12.92 0.00 0.00 4.18
121 122 0.731417 TAGCTAGTTCCGTGCGTCTC 59.269 55.000 0.00 0.00 0.00 3.36
122 123 1.516603 GCTAGTTCCGTGCGTCTCC 60.517 63.158 0.00 0.00 0.00 3.71
123 124 1.139095 CTAGTTCCGTGCGTCTCCC 59.861 63.158 0.00 0.00 0.00 4.30
124 125 1.592400 CTAGTTCCGTGCGTCTCCCA 61.592 60.000 0.00 0.00 0.00 4.37
125 126 0.968901 TAGTTCCGTGCGTCTCCCAT 60.969 55.000 0.00 0.00 0.00 4.00
126 127 1.375523 GTTCCGTGCGTCTCCCATT 60.376 57.895 0.00 0.00 0.00 3.16
127 128 1.375396 TTCCGTGCGTCTCCCATTG 60.375 57.895 0.00 0.00 0.00 2.82
128 129 1.822114 TTCCGTGCGTCTCCCATTGA 61.822 55.000 0.00 0.00 0.00 2.57
129 130 1.153369 CCGTGCGTCTCCCATTGAT 60.153 57.895 0.00 0.00 0.00 2.57
130 131 0.744414 CCGTGCGTCTCCCATTGATT 60.744 55.000 0.00 0.00 0.00 2.57
131 132 0.374758 CGTGCGTCTCCCATTGATTG 59.625 55.000 0.00 0.00 0.00 2.67
132 133 1.453155 GTGCGTCTCCCATTGATTGT 58.547 50.000 0.00 0.00 0.00 2.71
133 134 2.627945 GTGCGTCTCCCATTGATTGTA 58.372 47.619 0.00 0.00 0.00 2.41
134 135 2.609459 GTGCGTCTCCCATTGATTGTAG 59.391 50.000 0.00 0.00 0.00 2.74
135 136 2.236146 TGCGTCTCCCATTGATTGTAGT 59.764 45.455 0.00 0.00 0.00 2.73
136 137 3.270877 GCGTCTCCCATTGATTGTAGTT 58.729 45.455 0.00 0.00 0.00 2.24
137 138 4.081365 TGCGTCTCCCATTGATTGTAGTTA 60.081 41.667 0.00 0.00 0.00 2.24
138 139 4.508124 GCGTCTCCCATTGATTGTAGTTAG 59.492 45.833 0.00 0.00 0.00 2.34
139 140 5.661458 CGTCTCCCATTGATTGTAGTTAGT 58.339 41.667 0.00 0.00 0.00 2.24
140 141 6.106673 CGTCTCCCATTGATTGTAGTTAGTT 58.893 40.000 0.00 0.00 0.00 2.24
141 142 6.594159 CGTCTCCCATTGATTGTAGTTAGTTT 59.406 38.462 0.00 0.00 0.00 2.66
142 143 7.201530 CGTCTCCCATTGATTGTAGTTAGTTTC 60.202 40.741 0.00 0.00 0.00 2.78
143 144 7.606456 GTCTCCCATTGATTGTAGTTAGTTTCA 59.394 37.037 0.00 0.00 0.00 2.69
144 145 8.328758 TCTCCCATTGATTGTAGTTAGTTTCAT 58.671 33.333 0.00 0.00 0.00 2.57
145 146 8.506168 TCCCATTGATTGTAGTTAGTTTCATC 57.494 34.615 0.00 0.00 0.00 2.92
146 147 8.106462 TCCCATTGATTGTAGTTAGTTTCATCA 58.894 33.333 0.00 0.00 0.00 3.07
147 148 8.739039 CCCATTGATTGTAGTTAGTTTCATCAA 58.261 33.333 0.00 0.00 0.00 2.57
152 153 9.952030 TGATTGTAGTTAGTTTCATCAATACCA 57.048 29.630 0.00 0.00 0.00 3.25
159 160 9.461312 AGTTAGTTTCATCAATACCATTTAGCA 57.539 29.630 0.00 0.00 0.00 3.49
162 163 7.205297 AGTTTCATCAATACCATTTAGCATGC 58.795 34.615 10.51 10.51 0.00 4.06
163 164 6.964807 TTCATCAATACCATTTAGCATGCT 57.035 33.333 25.99 25.99 0.00 3.79
164 165 6.964807 TCATCAATACCATTTAGCATGCTT 57.035 33.333 28.02 9.25 0.00 3.91
165 166 6.741109 TCATCAATACCATTTAGCATGCTTG 58.259 36.000 28.02 18.08 0.00 4.01
178 179 4.100707 GCATGCTTGCTTATCAGTTTGA 57.899 40.909 16.80 0.00 45.77 2.69
179 180 4.679662 GCATGCTTGCTTATCAGTTTGAT 58.320 39.130 16.80 0.00 45.77 2.57
180 181 5.107133 GCATGCTTGCTTATCAGTTTGATT 58.893 37.500 16.80 0.00 45.77 2.57
181 182 5.005394 GCATGCTTGCTTATCAGTTTGATTG 59.995 40.000 16.80 0.00 45.77 2.67
182 183 5.963176 TGCTTGCTTATCAGTTTGATTGA 57.037 34.783 0.00 0.00 38.26 2.57
183 184 5.702865 TGCTTGCTTATCAGTTTGATTGAC 58.297 37.500 0.00 0.00 38.26 3.18
184 185 5.098211 GCTTGCTTATCAGTTTGATTGACC 58.902 41.667 0.00 0.00 38.26 4.02
185 186 5.105997 GCTTGCTTATCAGTTTGATTGACCT 60.106 40.000 0.00 0.00 38.26 3.85
186 187 6.500684 TTGCTTATCAGTTTGATTGACCTC 57.499 37.500 0.00 0.00 38.26 3.85
187 188 5.809001 TGCTTATCAGTTTGATTGACCTCT 58.191 37.500 0.00 0.00 38.26 3.69
188 189 6.946340 TGCTTATCAGTTTGATTGACCTCTA 58.054 36.000 0.00 0.00 38.26 2.43
189 190 7.568349 TGCTTATCAGTTTGATTGACCTCTAT 58.432 34.615 0.00 0.00 38.26 1.98
190 191 8.049117 TGCTTATCAGTTTGATTGACCTCTATT 58.951 33.333 0.00 0.00 38.26 1.73
191 192 8.897752 GCTTATCAGTTTGATTGACCTCTATTT 58.102 33.333 0.00 0.00 38.26 1.40
211 212 4.537135 TTTTTGTAAAGTGGTTGTGGCA 57.463 36.364 0.00 0.00 0.00 4.92
212 213 3.791973 TTTGTAAAGTGGTTGTGGCAG 57.208 42.857 0.00 0.00 0.00 4.85
213 214 1.686355 TGTAAAGTGGTTGTGGCAGG 58.314 50.000 0.00 0.00 0.00 4.85
214 215 1.213182 TGTAAAGTGGTTGTGGCAGGA 59.787 47.619 0.00 0.00 0.00 3.86
215 216 2.303175 GTAAAGTGGTTGTGGCAGGAA 58.697 47.619 0.00 0.00 0.00 3.36
216 217 1.111277 AAAGTGGTTGTGGCAGGAAC 58.889 50.000 0.00 0.00 0.00 3.62
217 218 0.755327 AAGTGGTTGTGGCAGGAACC 60.755 55.000 17.70 17.70 41.85 3.62
218 219 2.197324 TGGTTGTGGCAGGAACCC 59.803 61.111 20.42 7.85 40.94 4.11
219 220 2.197324 GGTTGTGGCAGGAACCCA 59.803 61.111 14.80 0.00 36.39 4.51
220 221 1.456705 GGTTGTGGCAGGAACCCAA 60.457 57.895 14.80 0.03 36.39 4.12
221 222 1.045911 GGTTGTGGCAGGAACCCAAA 61.046 55.000 14.80 0.00 36.39 3.28
222 223 0.827368 GTTGTGGCAGGAACCCAAAA 59.173 50.000 0.00 0.00 33.39 2.44
223 224 1.208293 GTTGTGGCAGGAACCCAAAAA 59.792 47.619 0.00 0.00 31.60 1.94
224 225 1.799933 TGTGGCAGGAACCCAAAAAT 58.200 45.000 0.00 0.00 33.39 1.82
225 226 2.964209 TGTGGCAGGAACCCAAAAATA 58.036 42.857 0.00 0.00 33.39 1.40
226 227 3.309296 TGTGGCAGGAACCCAAAAATAA 58.691 40.909 0.00 0.00 33.39 1.40
227 228 3.906846 TGTGGCAGGAACCCAAAAATAAT 59.093 39.130 0.00 0.00 33.39 1.28
228 229 4.349342 TGTGGCAGGAACCCAAAAATAATT 59.651 37.500 0.00 0.00 33.39 1.40
229 230 5.544176 TGTGGCAGGAACCCAAAAATAATTA 59.456 36.000 0.00 0.00 33.39 1.40
230 231 5.872617 GTGGCAGGAACCCAAAAATAATTAC 59.127 40.000 0.00 0.00 33.39 1.89
231 232 5.782845 TGGCAGGAACCCAAAAATAATTACT 59.217 36.000 0.00 0.00 0.00 2.24
232 233 6.106003 GGCAGGAACCCAAAAATAATTACTG 58.894 40.000 0.00 0.00 34.82 2.74
233 234 6.295632 GGCAGGAACCCAAAAATAATTACTGT 60.296 38.462 0.00 0.00 34.30 3.55
234 235 6.589907 GCAGGAACCCAAAAATAATTACTGTG 59.410 38.462 0.00 0.00 34.30 3.66
235 236 7.096551 CAGGAACCCAAAAATAATTACTGTGG 58.903 38.462 0.00 0.00 0.00 4.17
236 237 7.013834 AGGAACCCAAAAATAATTACTGTGGA 58.986 34.615 7.05 0.00 0.00 4.02
237 238 7.678171 AGGAACCCAAAAATAATTACTGTGGAT 59.322 33.333 7.05 0.00 0.00 3.41
238 239 8.973182 GGAACCCAAAAATAATTACTGTGGATA 58.027 33.333 7.05 0.00 0.00 2.59
239 240 9.797556 GAACCCAAAAATAATTACTGTGGATAC 57.202 33.333 7.05 0.00 0.00 2.24
240 241 9.541884 AACCCAAAAATAATTACTGTGGATACT 57.458 29.630 7.05 0.00 37.61 2.12
249 250 6.844696 ATTACTGTGGATACTACATTTGCG 57.155 37.500 0.00 0.00 37.61 4.85
250 251 4.465632 ACTGTGGATACTACATTTGCGA 57.534 40.909 0.00 0.00 37.61 5.10
251 252 4.433615 ACTGTGGATACTACATTTGCGAG 58.566 43.478 0.00 0.00 37.61 5.03
252 253 4.081642 ACTGTGGATACTACATTTGCGAGT 60.082 41.667 0.00 0.00 37.61 4.18
253 254 4.827692 TGTGGATACTACATTTGCGAGTT 58.172 39.130 0.00 0.00 37.61 3.01
254 255 4.868171 TGTGGATACTACATTTGCGAGTTC 59.132 41.667 0.00 0.00 37.61 3.01
255 256 4.868171 GTGGATACTACATTTGCGAGTTCA 59.132 41.667 0.00 0.00 37.61 3.18
256 257 5.523916 GTGGATACTACATTTGCGAGTTCAT 59.476 40.000 0.00 0.00 37.61 2.57
257 258 5.753438 TGGATACTACATTTGCGAGTTCATC 59.247 40.000 0.00 0.00 37.61 2.92
258 259 5.177696 GGATACTACATTTGCGAGTTCATCC 59.822 44.000 0.00 0.00 0.00 3.51
259 260 2.930040 ACTACATTTGCGAGTTCATCCG 59.070 45.455 0.00 0.00 0.00 4.18
264 265 2.434185 GCGAGTTCATCCGCCACA 60.434 61.111 0.00 0.00 45.06 4.17
265 266 2.032634 GCGAGTTCATCCGCCACAA 61.033 57.895 0.00 0.00 45.06 3.33
266 267 1.970917 GCGAGTTCATCCGCCACAAG 61.971 60.000 0.00 0.00 45.06 3.16
267 268 0.389817 CGAGTTCATCCGCCACAAGA 60.390 55.000 0.00 0.00 0.00 3.02
268 269 1.079503 GAGTTCATCCGCCACAAGAC 58.920 55.000 0.00 0.00 0.00 3.01
269 270 0.321653 AGTTCATCCGCCACAAGACC 60.322 55.000 0.00 0.00 0.00 3.85
270 271 0.321653 GTTCATCCGCCACAAGACCT 60.322 55.000 0.00 0.00 0.00 3.85
271 272 0.321564 TTCATCCGCCACAAGACCTG 60.322 55.000 0.00 0.00 0.00 4.00
272 273 1.003355 CATCCGCCACAAGACCTGT 60.003 57.895 0.00 0.00 39.56 4.00
279 280 2.743718 ACAAGACCTGTGAGCGGG 59.256 61.111 0.00 0.00 46.63 6.13
280 281 2.046892 CAAGACCTGTGAGCGGGG 60.047 66.667 0.00 0.00 45.50 5.73
283 284 3.075005 GACCTGTGAGCGGGGCTA 61.075 66.667 0.00 0.00 46.01 3.93
284 285 3.077556 ACCTGTGAGCGGGGCTAG 61.078 66.667 0.00 0.00 45.50 3.42
285 286 3.077556 CCTGTGAGCGGGGCTAGT 61.078 66.667 0.00 0.00 39.88 2.57
286 287 2.496817 CTGTGAGCGGGGCTAGTC 59.503 66.667 0.00 0.00 39.88 2.59
287 288 2.037367 TGTGAGCGGGGCTAGTCT 59.963 61.111 0.00 0.00 39.88 3.24
288 289 0.752009 CTGTGAGCGGGGCTAGTCTA 60.752 60.000 0.00 0.00 39.88 2.59
289 290 0.323999 TGTGAGCGGGGCTAGTCTAA 60.324 55.000 0.00 0.00 39.88 2.10
290 291 0.822164 GTGAGCGGGGCTAGTCTAAA 59.178 55.000 0.00 0.00 39.88 1.85
291 292 1.206371 GTGAGCGGGGCTAGTCTAAAA 59.794 52.381 0.00 0.00 39.88 1.52
292 293 1.903860 TGAGCGGGGCTAGTCTAAAAA 59.096 47.619 0.00 0.00 39.88 1.94
293 294 2.277969 GAGCGGGGCTAGTCTAAAAAC 58.722 52.381 0.00 0.00 39.88 2.43
294 295 1.065636 AGCGGGGCTAGTCTAAAAACC 60.066 52.381 0.00 0.00 36.99 3.27
295 296 1.339342 GCGGGGCTAGTCTAAAAACCA 60.339 52.381 0.00 0.00 0.00 3.67
296 297 2.876892 GCGGGGCTAGTCTAAAAACCAA 60.877 50.000 0.00 0.00 0.00 3.67
297 298 3.617284 CGGGGCTAGTCTAAAAACCAAT 58.383 45.455 0.00 0.00 0.00 3.16
298 299 4.773013 CGGGGCTAGTCTAAAAACCAATA 58.227 43.478 0.00 0.00 0.00 1.90
299 300 5.374071 CGGGGCTAGTCTAAAAACCAATAT 58.626 41.667 0.00 0.00 0.00 1.28
300 301 5.238650 CGGGGCTAGTCTAAAAACCAATATG 59.761 44.000 0.00 0.00 0.00 1.78
301 302 6.362248 GGGGCTAGTCTAAAAACCAATATGA 58.638 40.000 0.00 0.00 0.00 2.15
302 303 6.831868 GGGGCTAGTCTAAAAACCAATATGAA 59.168 38.462 0.00 0.00 0.00 2.57
303 304 7.013369 GGGGCTAGTCTAAAAACCAATATGAAG 59.987 40.741 0.00 0.00 0.00 3.02
304 305 7.556635 GGGCTAGTCTAAAAACCAATATGAAGT 59.443 37.037 0.00 0.00 0.00 3.01
305 306 8.398665 GGCTAGTCTAAAAACCAATATGAAGTG 58.601 37.037 0.00 0.00 0.00 3.16
306 307 7.910683 GCTAGTCTAAAAACCAATATGAAGTGC 59.089 37.037 0.00 0.00 0.00 4.40
307 308 7.759489 AGTCTAAAAACCAATATGAAGTGCA 57.241 32.000 0.00 0.00 0.00 4.57
308 309 8.353423 AGTCTAAAAACCAATATGAAGTGCAT 57.647 30.769 0.00 0.00 41.08 3.96
309 310 9.461312 AGTCTAAAAACCAATATGAAGTGCATA 57.539 29.630 0.00 0.00 43.28 3.14
312 313 7.832503 AAAAACCAATATGAAGTGCATAAGC 57.167 32.000 0.00 0.00 42.45 3.09
408 409 5.869649 AAAAATATGAGCGGGGCTTTATT 57.130 34.783 0.00 0.00 39.88 1.40
409 410 6.969993 AAAAATATGAGCGGGGCTTTATTA 57.030 33.333 0.00 0.00 39.88 0.98
410 411 5.959618 AAATATGAGCGGGGCTTTATTAC 57.040 39.130 0.00 0.00 39.88 1.89
411 412 4.910458 ATATGAGCGGGGCTTTATTACT 57.090 40.909 0.00 0.00 39.88 2.24
412 413 2.325583 TGAGCGGGGCTTTATTACTG 57.674 50.000 0.00 0.00 39.88 2.74
413 414 1.834896 TGAGCGGGGCTTTATTACTGA 59.165 47.619 0.00 0.00 39.88 3.41
414 415 2.210961 GAGCGGGGCTTTATTACTGAC 58.789 52.381 0.00 0.00 39.88 3.51
415 416 1.134189 AGCGGGGCTTTATTACTGACC 60.134 52.381 0.00 0.00 33.89 4.02
416 417 1.963172 CGGGGCTTTATTACTGACCC 58.037 55.000 0.00 0.00 45.46 4.46
417 418 1.489230 CGGGGCTTTATTACTGACCCT 59.511 52.381 1.39 0.00 46.71 4.34
418 419 2.092592 CGGGGCTTTATTACTGACCCTT 60.093 50.000 1.39 0.00 46.71 3.95
419 420 3.623954 CGGGGCTTTATTACTGACCCTTT 60.624 47.826 1.39 0.00 46.71 3.11
420 421 4.384427 CGGGGCTTTATTACTGACCCTTTA 60.384 45.833 1.39 0.00 46.71 1.85
421 422 5.131067 GGGGCTTTATTACTGACCCTTTAG 58.869 45.833 0.00 0.00 45.47 1.85
422 423 5.339778 GGGGCTTTATTACTGACCCTTTAGT 60.340 44.000 0.00 0.00 45.47 2.24
423 424 5.821470 GGGCTTTATTACTGACCCTTTAGTC 59.179 44.000 0.00 0.00 37.28 2.59
424 425 5.821470 GGCTTTATTACTGACCCTTTAGTCC 59.179 44.000 0.00 0.00 35.83 3.85
425 426 5.821470 GCTTTATTACTGACCCTTTAGTCCC 59.179 44.000 0.00 0.00 35.83 4.46
426 427 5.603170 TTATTACTGACCCTTTAGTCCCG 57.397 43.478 0.00 0.00 35.83 5.14
427 428 1.856629 TACTGACCCTTTAGTCCCGG 58.143 55.000 0.00 0.00 35.83 5.73
428 429 0.178912 ACTGACCCTTTAGTCCCGGT 60.179 55.000 0.00 0.00 35.83 5.28
429 430 0.981943 CTGACCCTTTAGTCCCGGTT 59.018 55.000 0.00 0.00 35.83 4.44
430 431 0.978907 TGACCCTTTAGTCCCGGTTC 59.021 55.000 0.00 0.00 35.83 3.62
431 432 0.108472 GACCCTTTAGTCCCGGTTCG 60.108 60.000 0.00 0.00 0.00 3.95
448 449 3.074369 GGGAACCGGGGCAAATGG 61.074 66.667 6.32 0.00 40.86 3.16
449 450 3.074369 GGAACCGGGGCAAATGGG 61.074 66.667 6.32 0.00 0.00 4.00
450 451 3.770040 GAACCGGGGCAAATGGGC 61.770 66.667 6.32 0.00 42.44 5.36
460 461 0.677842 GCAAATGGGCCTCATGATCC 59.322 55.000 4.53 0.25 35.99 3.36
461 462 0.956633 CAAATGGGCCTCATGATCCG 59.043 55.000 4.53 0.00 35.99 4.18
462 463 0.178981 AAATGGGCCTCATGATCCGG 60.179 55.000 4.53 0.00 35.99 5.14
463 464 2.072874 AATGGGCCTCATGATCCGGG 62.073 60.000 4.53 0.00 35.99 5.73
464 465 2.849162 GGGCCTCATGATCCGGGA 60.849 66.667 0.84 0.00 0.00 5.14
465 466 2.427753 GGCCTCATGATCCGGGAC 59.572 66.667 0.00 0.00 0.00 4.46
466 467 2.443394 GGCCTCATGATCCGGGACA 61.443 63.158 0.00 2.26 0.00 4.02
467 468 1.526887 GCCTCATGATCCGGGACAA 59.473 57.895 0.00 0.00 0.00 3.18
468 469 0.107214 GCCTCATGATCCGGGACAAA 60.107 55.000 0.00 0.00 0.00 2.83
469 470 1.477558 GCCTCATGATCCGGGACAAAT 60.478 52.381 0.00 0.00 0.00 2.32
470 471 2.224606 CCTCATGATCCGGGACAAATG 58.775 52.381 0.00 3.99 0.00 2.32
471 472 2.158769 CCTCATGATCCGGGACAAATGA 60.159 50.000 0.00 14.15 0.00 2.57
472 473 3.136763 CTCATGATCCGGGACAAATGAG 58.863 50.000 21.55 21.55 36.24 2.90
473 474 1.605710 CATGATCCGGGACAAATGAGC 59.394 52.381 0.00 0.00 0.00 4.26
474 475 0.617935 TGATCCGGGACAAATGAGCA 59.382 50.000 0.00 0.00 0.00 4.26
475 476 1.212688 TGATCCGGGACAAATGAGCAT 59.787 47.619 0.00 0.00 0.00 3.79
476 477 2.301346 GATCCGGGACAAATGAGCATT 58.699 47.619 0.00 0.00 0.00 3.56
477 478 2.214376 TCCGGGACAAATGAGCATTT 57.786 45.000 0.00 2.74 41.33 2.32
478 479 2.524306 TCCGGGACAAATGAGCATTTT 58.476 42.857 0.00 0.00 38.84 1.82
479 480 2.896685 TCCGGGACAAATGAGCATTTTT 59.103 40.909 0.00 0.26 38.84 1.94
480 481 3.056891 TCCGGGACAAATGAGCATTTTTC 60.057 43.478 0.00 11.67 38.84 2.29
481 482 3.056607 CCGGGACAAATGAGCATTTTTCT 60.057 43.478 16.91 1.40 38.84 2.52
482 483 4.157656 CCGGGACAAATGAGCATTTTTCTA 59.842 41.667 16.91 0.00 38.84 2.10
483 484 5.095490 CGGGACAAATGAGCATTTTTCTAC 58.905 41.667 16.91 11.58 38.84 2.59
484 485 5.106157 CGGGACAAATGAGCATTTTTCTACT 60.106 40.000 16.91 0.00 38.84 2.57
485 486 6.093495 CGGGACAAATGAGCATTTTTCTACTA 59.907 38.462 16.91 0.00 38.84 1.82
486 487 7.475840 GGGACAAATGAGCATTTTTCTACTAG 58.524 38.462 16.91 0.00 38.84 2.57
487 488 7.121315 GGGACAAATGAGCATTTTTCTACTAGT 59.879 37.037 16.91 0.00 38.84 2.57
488 489 7.965107 GGACAAATGAGCATTTTTCTACTAGTG 59.035 37.037 16.91 0.00 38.84 2.74
521 527 6.976934 AGTTTGTTAACTTGAATCCCACAT 57.023 33.333 7.22 0.00 41.85 3.21
539 545 5.128171 CCCACATCAAATGATCATTCCACTT 59.872 40.000 20.95 2.54 31.21 3.16
622 629 3.591527 TCCTCAGGGATGTTTGGTGTATT 59.408 43.478 0.00 0.00 36.57 1.89
669 676 5.175090 TGTAATGAAATGTTGCAACACGA 57.825 34.783 33.29 17.55 42.51 4.35
675 682 4.867047 TGAAATGTTGCAACACGATTTTGT 59.133 33.333 33.29 12.67 42.51 2.83
678 685 4.103365 TGTTGCAACACGATTTTGTCTT 57.897 36.364 27.96 0.00 33.17 3.01
760 770 2.384382 CACGCGTTTTTCTGCAAAGAT 58.616 42.857 10.22 0.00 0.00 2.40
778 788 2.932614 AGATCAGACGCTTGAAAATCCG 59.067 45.455 0.00 0.00 0.00 4.18
1040 1059 0.602905 CCTCTCACAACCCCACGAAC 60.603 60.000 0.00 0.00 0.00 3.95
1084 1103 3.629087 TCTAACCGTTTTTCCACCCAAA 58.371 40.909 0.00 0.00 0.00 3.28
1198 1217 4.097589 CCTCTTTGATGATCTTTCTTGGCC 59.902 45.833 0.00 0.00 0.00 5.36
1264 1283 1.570813 GCAAACTCACCAGGTTTTGC 58.429 50.000 19.77 19.77 35.09 3.68
1384 1403 9.719355 TTGACTTTCAGTTAGCAGTTGATATTA 57.281 29.630 0.00 0.00 0.00 0.98
1599 1618 0.185901 AAGCCCAAGAACAAGCCAGA 59.814 50.000 0.00 0.00 0.00 3.86
1643 1662 1.073964 CAATCTGCACCACGTCTCTG 58.926 55.000 0.00 0.00 0.00 3.35
1692 1711 0.881118 ACATCCGAAACAAGCGCAAT 59.119 45.000 11.47 0.00 0.00 3.56
1867 1886 4.819761 GCGATCCAGCAGGCGACA 62.820 66.667 0.00 0.00 37.05 4.35
1978 2006 4.355925 GACACGTCGGCCTTCTTT 57.644 55.556 0.00 0.00 0.00 2.52
2373 2485 2.093764 CAGAGACTTGAAGCCGGAGAAT 60.094 50.000 5.05 0.00 0.00 2.40
2409 2521 1.746239 CGGCCACATCATGCTGTCA 60.746 57.895 2.24 0.00 0.00 3.58
2583 2713 2.647158 GCCGTCGTCCTTCTTCCCT 61.647 63.158 0.00 0.00 0.00 4.20
3213 3448 7.168219 ACTGGCATTAGATTGTTTGACTTCTA 58.832 34.615 0.00 0.00 0.00 2.10
3253 3488 3.521560 ACGTATATGCTTCACACACTGG 58.478 45.455 0.00 0.00 0.00 4.00
3469 3710 2.839975 TGGCAGTACAACGAACATCAA 58.160 42.857 0.00 0.00 0.00 2.57
3510 3751 1.214673 TCCATAGACCACCTAGCGACT 59.785 52.381 0.00 0.00 0.00 4.18
3512 3753 2.814919 CCATAGACCACCTAGCGACTAG 59.185 54.545 6.85 6.85 34.16 2.57
3531 3772 1.341531 AGTACAAGCACTGAAGCGAGT 59.658 47.619 0.00 0.00 40.15 4.18
3559 3800 2.597340 CCGCCATCATCACCCCTT 59.403 61.111 0.00 0.00 0.00 3.95
3588 3829 1.299089 GTCGGGCACAACTTGTTGC 60.299 57.895 12.76 4.23 0.00 4.17
3590 3831 1.140589 CGGGCACAACTTGTTGCAA 59.859 52.632 12.76 0.00 0.00 4.08
3593 3834 2.544694 CGGGCACAACTTGTTGCAATAA 60.545 45.455 12.76 5.23 0.00 1.40
3594 3835 2.799978 GGGCACAACTTGTTGCAATAAC 59.200 45.455 12.76 0.00 0.00 1.89
3595 3836 2.470999 GGCACAACTTGTTGCAATAACG 59.529 45.455 12.76 3.28 0.00 3.18
3596 3837 3.112580 GCACAACTTGTTGCAATAACGT 58.887 40.909 12.76 3.92 0.00 3.99
3621 3869 0.179468 GTCGTGCTAAGGCCCCATAA 59.821 55.000 0.00 0.00 37.74 1.90
3636 3884 1.091771 CATAAGACCAGCGCACCAGG 61.092 60.000 11.47 8.53 0.00 4.45
3641 3889 1.961180 GACCAGCGCACCAGGATAGT 61.961 60.000 11.47 0.00 0.00 2.12
3652 3900 0.828022 CAGGATAGTAACCGCCACCA 59.172 55.000 0.00 0.00 0.00 4.17
3670 3918 4.035208 CCACCAATGAAGAATAACGTAGGC 59.965 45.833 0.00 0.00 0.00 3.93
3695 3943 1.076332 GGATTCAACCCGAAGACACG 58.924 55.000 0.00 0.00 36.95 4.49
3699 3947 2.049433 AACCCGAAGACACGCGAG 60.049 61.111 15.93 7.88 0.00 5.03
3741 3989 0.527565 CCGAGCAAATCCACCAAAGG 59.472 55.000 0.00 0.00 0.00 3.11
3789 4037 1.090052 GCCCACCAACGATGCTAGAC 61.090 60.000 0.00 0.00 0.00 2.59
3799 4047 2.986979 TGCTAGACGCACCACCGA 60.987 61.111 0.00 0.00 45.47 4.69
3829 4077 3.070590 GCTAGGCGGGAAGACCTTTATTA 59.929 47.826 0.00 0.00 37.50 0.98
3835 4083 4.750598 GCGGGAAGACCTTTATTACATCTC 59.249 45.833 0.00 0.00 36.97 2.75
3840 4088 5.297569 AGACCTTTATTACATCTCCAGGC 57.702 43.478 0.00 0.00 0.00 4.85
3846 4094 1.264749 TTACATCTCCAGGCAGCCGT 61.265 55.000 5.55 0.00 0.00 5.68
3892 4140 4.448210 GACACAAACCCTAACAAGACAGA 58.552 43.478 0.00 0.00 0.00 3.41
3916 4164 5.830000 AAAAACGACTAAAAACAGAGCCT 57.170 34.783 0.00 0.00 0.00 4.58
3919 4167 4.338379 ACGACTAAAAACAGAGCCTTCT 57.662 40.909 0.00 0.00 0.00 2.85
3932 4180 3.804193 CTTCTCGCCGGCCTTTGC 61.804 66.667 23.46 0.00 0.00 3.68
3945 4193 1.528309 CTTTGCCAGGAACCACCGT 60.528 57.895 0.00 0.00 44.74 4.83
3953 4201 2.668550 GAACCACCGTGCCTCCAC 60.669 66.667 0.00 0.00 38.62 4.02
4018 4266 1.338769 GCGAGAGGCAGAAACCCTAAA 60.339 52.381 0.00 0.00 42.87 1.85
4050 4298 2.099405 GAGGAGGAGGAGTGACTTGAG 58.901 57.143 0.00 0.00 0.00 3.02
4051 4299 1.190643 GGAGGAGGAGTGACTTGAGG 58.809 60.000 0.00 0.00 0.00 3.86
4052 4300 1.272760 GGAGGAGGAGTGACTTGAGGA 60.273 57.143 0.00 0.00 0.00 3.71
4053 4301 2.625617 GGAGGAGGAGTGACTTGAGGAT 60.626 54.545 0.00 0.00 0.00 3.24
4054 4302 2.693074 GAGGAGGAGTGACTTGAGGATC 59.307 54.545 0.00 0.00 0.00 3.36
4055 4303 2.314549 AGGAGGAGTGACTTGAGGATCT 59.685 50.000 0.00 0.00 34.92 2.75
4056 4304 3.529734 AGGAGGAGTGACTTGAGGATCTA 59.470 47.826 0.00 0.00 34.92 1.98
4057 4305 4.017037 AGGAGGAGTGACTTGAGGATCTAA 60.017 45.833 0.00 0.00 34.92 2.10
4058 4306 4.712337 GGAGGAGTGACTTGAGGATCTAAA 59.288 45.833 0.00 0.00 34.92 1.85
4059 4307 5.187967 GGAGGAGTGACTTGAGGATCTAAAA 59.812 44.000 0.00 0.00 34.92 1.52
4060 4308 6.295916 GGAGGAGTGACTTGAGGATCTAAAAA 60.296 42.308 0.00 0.00 34.92 1.94
4149 4397 1.349688 TGTGGCTCTCGGGTGTAATTT 59.650 47.619 0.00 0.00 0.00 1.82
4215 4470 4.170256 TCTCAAACCTTTTGCGAACAAAC 58.830 39.130 0.00 0.00 45.29 2.93
4287 4542 8.417780 TTTCATGTTGTTGTGGACATAAAAAG 57.582 30.769 0.00 0.00 38.26 2.27
4367 4627 6.487689 TTTTTGCCAGAATTTTGTTTCGTT 57.512 29.167 0.00 0.00 0.00 3.85
4368 4628 5.462034 TTTGCCAGAATTTTGTTTCGTTG 57.538 34.783 0.00 0.00 0.00 4.10
4369 4629 2.863137 TGCCAGAATTTTGTTTCGTTGC 59.137 40.909 0.00 0.00 0.00 4.17
4370 4630 2.863137 GCCAGAATTTTGTTTCGTTGCA 59.137 40.909 0.00 0.00 0.00 4.08
4371 4631 3.060339 GCCAGAATTTTGTTTCGTTGCAG 60.060 43.478 0.00 0.00 0.00 4.41
4372 4632 4.358851 CCAGAATTTTGTTTCGTTGCAGA 58.641 39.130 0.00 0.00 0.00 4.26
4373 4633 4.803088 CCAGAATTTTGTTTCGTTGCAGAA 59.197 37.500 0.00 0.00 0.00 3.02
4374 4634 5.463061 CCAGAATTTTGTTTCGTTGCAGAAT 59.537 36.000 0.00 0.00 0.00 2.40
4375 4635 6.349426 CAGAATTTTGTTTCGTTGCAGAATG 58.651 36.000 0.00 0.00 40.87 2.67
4376 4636 6.019640 CAGAATTTTGTTTCGTTGCAGAATGT 60.020 34.615 0.00 0.00 39.31 2.71
4377 4637 6.534793 AGAATTTTGTTTCGTTGCAGAATGTT 59.465 30.769 0.00 0.00 39.31 2.71
4378 4638 6.660887 ATTTTGTTTCGTTGCAGAATGTTT 57.339 29.167 0.00 0.00 39.31 2.83
4379 4639 6.473397 TTTTGTTTCGTTGCAGAATGTTTT 57.527 29.167 0.00 0.00 39.31 2.43
4380 4640 6.473397 TTTGTTTCGTTGCAGAATGTTTTT 57.527 29.167 0.00 0.00 39.31 1.94
4381 4641 5.447478 TGTTTCGTTGCAGAATGTTTTTG 57.553 34.783 0.00 0.00 39.31 2.44
4382 4642 4.926238 TGTTTCGTTGCAGAATGTTTTTGT 59.074 33.333 0.00 0.00 39.31 2.83
4383 4643 6.093404 TGTTTCGTTGCAGAATGTTTTTGTA 58.907 32.000 0.00 0.00 39.31 2.41
4384 4644 6.034044 TGTTTCGTTGCAGAATGTTTTTGTAC 59.966 34.615 0.00 0.00 39.31 2.90
4385 4645 4.275662 TCGTTGCAGAATGTTTTTGTACG 58.724 39.130 0.00 0.00 39.31 3.67
4386 4646 4.034163 TCGTTGCAGAATGTTTTTGTACGA 59.966 37.500 0.00 0.00 39.31 3.43
4387 4647 4.144051 CGTTGCAGAATGTTTTTGTACGAC 59.856 41.667 0.00 0.00 39.31 4.34
4388 4648 4.884458 TGCAGAATGTTTTTGTACGACA 57.116 36.364 0.00 0.00 39.31 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.691754 CCTGCCAGACAAAGAAAACAATTAC 59.308 40.000 0.00 0.00 0.00 1.89
3 4 3.070015 CCCTGCCAGACAAAGAAAACAAT 59.930 43.478 0.00 0.00 0.00 2.71
10 11 1.691196 CAAACCCTGCCAGACAAAGA 58.309 50.000 0.00 0.00 0.00 2.52
12 13 0.260230 TCCAAACCCTGCCAGACAAA 59.740 50.000 0.00 0.00 0.00 2.83
13 14 0.260230 TTCCAAACCCTGCCAGACAA 59.740 50.000 0.00 0.00 0.00 3.18
14 15 0.260230 TTTCCAAACCCTGCCAGACA 59.740 50.000 0.00 0.00 0.00 3.41
15 16 1.408969 TTTTCCAAACCCTGCCAGAC 58.591 50.000 0.00 0.00 0.00 3.51
16 17 2.038659 CTTTTTCCAAACCCTGCCAGA 58.961 47.619 0.00 0.00 0.00 3.86
17 18 1.762370 ACTTTTTCCAAACCCTGCCAG 59.238 47.619 0.00 0.00 0.00 4.85
18 19 1.872773 ACTTTTTCCAAACCCTGCCA 58.127 45.000 0.00 0.00 0.00 4.92
19 20 2.169561 TGAACTTTTTCCAAACCCTGCC 59.830 45.455 0.00 0.00 0.00 4.85
20 21 3.194861 GTGAACTTTTTCCAAACCCTGC 58.805 45.455 0.00 0.00 0.00 4.85
21 22 3.736740 CGGTGAACTTTTTCCAAACCCTG 60.737 47.826 0.00 0.00 0.00 4.45
22 23 2.429250 CGGTGAACTTTTTCCAAACCCT 59.571 45.455 0.00 0.00 0.00 4.34
23 24 2.816689 CGGTGAACTTTTTCCAAACCC 58.183 47.619 0.00 0.00 0.00 4.11
24 25 2.198406 GCGGTGAACTTTTTCCAAACC 58.802 47.619 0.00 0.00 0.00 3.27
25 26 2.857748 CTGCGGTGAACTTTTTCCAAAC 59.142 45.455 0.00 0.00 0.00 2.93
26 27 2.755655 TCTGCGGTGAACTTTTTCCAAA 59.244 40.909 0.00 0.00 0.00 3.28
27 28 2.370349 TCTGCGGTGAACTTTTTCCAA 58.630 42.857 0.00 0.00 0.00 3.53
28 29 2.045561 TCTGCGGTGAACTTTTTCCA 57.954 45.000 0.00 0.00 0.00 3.53
29 30 3.113322 GTTTCTGCGGTGAACTTTTTCC 58.887 45.455 0.00 0.00 0.00 3.13
30 31 4.028852 AGTTTCTGCGGTGAACTTTTTC 57.971 40.909 10.08 0.00 0.00 2.29
31 32 3.181490 GGAGTTTCTGCGGTGAACTTTTT 60.181 43.478 15.01 0.00 0.00 1.94
32 33 2.357952 GGAGTTTCTGCGGTGAACTTTT 59.642 45.455 15.01 0.00 0.00 2.27
33 34 1.947456 GGAGTTTCTGCGGTGAACTTT 59.053 47.619 15.01 0.00 0.00 2.66
34 35 1.594331 GGAGTTTCTGCGGTGAACTT 58.406 50.000 15.01 3.65 0.00 2.66
35 36 0.600255 CGGAGTTTCTGCGGTGAACT 60.600 55.000 14.15 14.15 41.42 3.01
36 37 1.860078 CGGAGTTTCTGCGGTGAAC 59.140 57.895 2.93 0.00 41.42 3.18
37 38 4.354155 CGGAGTTTCTGCGGTGAA 57.646 55.556 2.93 0.00 41.42 3.18
42 43 1.738099 CAGTCCCGGAGTTTCTGCG 60.738 63.158 0.73 3.85 44.57 5.18
43 44 0.670854 GACAGTCCCGGAGTTTCTGC 60.671 60.000 0.73 0.00 0.00 4.26
44 45 0.388649 CGACAGTCCCGGAGTTTCTG 60.389 60.000 0.73 6.40 0.00 3.02
45 46 1.965219 CGACAGTCCCGGAGTTTCT 59.035 57.895 0.73 0.00 0.00 2.52
46 47 4.573162 CGACAGTCCCGGAGTTTC 57.427 61.111 0.73 0.00 0.00 2.78
55 56 3.003763 AAGCTCCCCCGACAGTCC 61.004 66.667 0.00 0.00 0.00 3.85
56 57 2.579738 GAAGCTCCCCCGACAGTC 59.420 66.667 0.00 0.00 0.00 3.51
57 58 3.003763 GGAAGCTCCCCCGACAGT 61.004 66.667 0.00 0.00 0.00 3.55
58 59 1.915078 AATGGAAGCTCCCCCGACAG 61.915 60.000 0.00 0.00 35.03 3.51
59 60 1.497309 AAATGGAAGCTCCCCCGACA 61.497 55.000 0.00 0.00 35.03 4.35
60 61 0.544697 TAAATGGAAGCTCCCCCGAC 59.455 55.000 0.00 0.00 35.03 4.79
61 62 1.291109 TTAAATGGAAGCTCCCCCGA 58.709 50.000 0.00 0.00 35.03 5.14
62 63 1.749063 GTTTAAATGGAAGCTCCCCCG 59.251 52.381 0.00 0.00 35.03 5.73
63 64 2.496070 GTGTTTAAATGGAAGCTCCCCC 59.504 50.000 0.00 0.00 35.03 5.40
64 65 2.496070 GGTGTTTAAATGGAAGCTCCCC 59.504 50.000 0.00 0.00 35.03 4.81
65 66 3.193479 CAGGTGTTTAAATGGAAGCTCCC 59.807 47.826 0.00 0.00 35.03 4.30
66 67 4.079253 TCAGGTGTTTAAATGGAAGCTCC 58.921 43.478 0.00 0.00 36.96 4.70
67 68 5.705609 TTCAGGTGTTTAAATGGAAGCTC 57.294 39.130 0.00 0.00 0.00 4.09
68 69 5.598417 ACTTTCAGGTGTTTAAATGGAAGCT 59.402 36.000 7.27 0.00 32.46 3.74
69 70 5.842907 ACTTTCAGGTGTTTAAATGGAAGC 58.157 37.500 7.27 0.00 32.46 3.86
70 71 8.630037 ACTTACTTTCAGGTGTTTAAATGGAAG 58.370 33.333 6.16 6.16 34.92 3.46
71 72 8.528044 ACTTACTTTCAGGTGTTTAAATGGAA 57.472 30.769 0.00 0.00 0.00 3.53
72 73 9.059260 GTACTTACTTTCAGGTGTTTAAATGGA 57.941 33.333 0.00 0.00 0.00 3.41
73 74 9.063615 AGTACTTACTTTCAGGTGTTTAAATGG 57.936 33.333 0.00 0.00 31.13 3.16
79 80 8.087136 GCTAGTAGTACTTACTTTCAGGTGTTT 58.913 37.037 8.40 0.00 42.57 2.83
80 81 7.450944 AGCTAGTAGTACTTACTTTCAGGTGTT 59.549 37.037 8.40 0.00 42.57 3.32
81 82 6.947158 AGCTAGTAGTACTTACTTTCAGGTGT 59.053 38.462 8.40 0.00 42.57 4.16
82 83 7.393841 AGCTAGTAGTACTTACTTTCAGGTG 57.606 40.000 8.40 0.00 42.57 4.00
83 84 8.328014 ACTAGCTAGTAGTACTTACTTTCAGGT 58.672 37.037 24.97 6.08 40.47 4.00
84 85 8.735692 ACTAGCTAGTAGTACTTACTTTCAGG 57.264 38.462 24.97 0.00 40.47 3.86
86 87 9.171877 GGAACTAGCTAGTAGTACTTACTTTCA 57.828 37.037 26.29 0.00 41.50 2.69
87 88 8.334632 CGGAACTAGCTAGTAGTACTTACTTTC 58.665 40.741 26.29 14.62 41.50 2.62
88 89 7.826744 ACGGAACTAGCTAGTAGTACTTACTTT 59.173 37.037 26.29 6.42 41.50 2.66
89 90 7.279758 CACGGAACTAGCTAGTAGTACTTACTT 59.720 40.741 26.29 6.96 41.50 2.24
90 91 6.760770 CACGGAACTAGCTAGTAGTACTTACT 59.239 42.308 26.29 7.72 41.50 2.24
91 92 6.510960 GCACGGAACTAGCTAGTAGTACTTAC 60.511 46.154 26.29 9.80 41.50 2.34
92 93 5.525378 GCACGGAACTAGCTAGTAGTACTTA 59.475 44.000 26.29 0.00 41.50 2.24
93 94 4.335037 GCACGGAACTAGCTAGTAGTACTT 59.665 45.833 26.29 10.02 41.50 2.24
94 95 3.876320 GCACGGAACTAGCTAGTAGTACT 59.124 47.826 26.29 10.79 41.50 2.73
95 96 3.303001 CGCACGGAACTAGCTAGTAGTAC 60.303 52.174 26.29 18.33 41.50 2.73
96 97 2.868583 CGCACGGAACTAGCTAGTAGTA 59.131 50.000 26.29 0.00 41.50 1.82
97 98 1.669779 CGCACGGAACTAGCTAGTAGT 59.330 52.381 26.29 21.55 44.51 2.73
98 99 1.669779 ACGCACGGAACTAGCTAGTAG 59.330 52.381 26.29 20.95 34.99 2.57
99 100 1.667724 GACGCACGGAACTAGCTAGTA 59.332 52.381 26.29 0.00 34.99 1.82
100 101 0.450983 GACGCACGGAACTAGCTAGT 59.549 55.000 20.95 20.95 38.39 2.57
101 102 0.733729 AGACGCACGGAACTAGCTAG 59.266 55.000 19.44 19.44 0.00 3.42
102 103 0.731417 GAGACGCACGGAACTAGCTA 59.269 55.000 0.00 0.00 0.00 3.32
103 104 1.507174 GAGACGCACGGAACTAGCT 59.493 57.895 0.00 0.00 0.00 3.32
104 105 1.516603 GGAGACGCACGGAACTAGC 60.517 63.158 0.00 0.00 0.00 3.42
105 106 1.139095 GGGAGACGCACGGAACTAG 59.861 63.158 0.00 0.00 0.00 2.57
106 107 0.968901 ATGGGAGACGCACGGAACTA 60.969 55.000 0.00 0.00 0.00 2.24
107 108 1.827399 AATGGGAGACGCACGGAACT 61.827 55.000 0.00 0.00 0.00 3.01
108 109 1.375523 AATGGGAGACGCACGGAAC 60.376 57.895 0.00 0.00 0.00 3.62
109 110 1.375396 CAATGGGAGACGCACGGAA 60.375 57.895 0.00 0.00 0.00 4.30
110 111 1.613317 ATCAATGGGAGACGCACGGA 61.613 55.000 0.00 0.00 0.00 4.69
111 112 0.744414 AATCAATGGGAGACGCACGG 60.744 55.000 0.00 0.00 0.00 4.94
112 113 0.374758 CAATCAATGGGAGACGCACG 59.625 55.000 0.00 0.00 0.00 5.34
113 114 1.453155 ACAATCAATGGGAGACGCAC 58.547 50.000 0.00 0.00 0.00 5.34
114 115 2.236146 ACTACAATCAATGGGAGACGCA 59.764 45.455 0.00 0.00 0.00 5.24
115 116 2.906354 ACTACAATCAATGGGAGACGC 58.094 47.619 0.00 0.00 0.00 5.19
116 117 5.661458 ACTAACTACAATCAATGGGAGACG 58.339 41.667 0.00 0.00 0.00 4.18
117 118 7.606456 TGAAACTAACTACAATCAATGGGAGAC 59.394 37.037 0.00 0.00 0.00 3.36
118 119 7.685481 TGAAACTAACTACAATCAATGGGAGA 58.315 34.615 0.00 0.00 0.00 3.71
119 120 7.921786 TGAAACTAACTACAATCAATGGGAG 57.078 36.000 0.00 0.00 0.00 4.30
120 121 8.106462 TGATGAAACTAACTACAATCAATGGGA 58.894 33.333 0.00 0.00 0.00 4.37
121 122 8.279970 TGATGAAACTAACTACAATCAATGGG 57.720 34.615 0.00 0.00 0.00 4.00
126 127 9.952030 TGGTATTGATGAAACTAACTACAATCA 57.048 29.630 0.00 0.00 0.00 2.57
133 134 9.461312 TGCTAAATGGTATTGATGAAACTAACT 57.539 29.630 0.00 0.00 0.00 2.24
136 137 8.352201 GCATGCTAAATGGTATTGATGAAACTA 58.648 33.333 11.37 0.00 0.00 2.24
137 138 7.069085 AGCATGCTAAATGGTATTGATGAAACT 59.931 33.333 21.21 0.00 0.00 2.66
138 139 7.205297 AGCATGCTAAATGGTATTGATGAAAC 58.795 34.615 21.21 0.00 0.00 2.78
139 140 7.350744 AGCATGCTAAATGGTATTGATGAAA 57.649 32.000 21.21 0.00 0.00 2.69
140 141 6.964807 AGCATGCTAAATGGTATTGATGAA 57.035 33.333 21.21 0.00 0.00 2.57
141 142 6.741109 CAAGCATGCTAAATGGTATTGATGA 58.259 36.000 23.00 0.00 0.00 2.92
156 157 4.401519 ATCAAACTGATAAGCAAGCATGCT 59.598 37.500 16.30 16.30 46.70 3.79
157 158 4.679662 ATCAAACTGATAAGCAAGCATGC 58.320 39.130 10.51 10.51 43.44 4.06
158 159 6.252869 GTCAATCAAACTGATAAGCAAGCATG 59.747 38.462 0.00 0.00 35.76 4.06
159 160 6.327934 GTCAATCAAACTGATAAGCAAGCAT 58.672 36.000 0.00 0.00 35.76 3.79
160 161 5.335897 GGTCAATCAAACTGATAAGCAAGCA 60.336 40.000 0.00 0.00 35.76 3.91
161 162 5.098211 GGTCAATCAAACTGATAAGCAAGC 58.902 41.667 0.00 0.00 35.76 4.01
162 163 6.373774 AGAGGTCAATCAAACTGATAAGCAAG 59.626 38.462 0.00 0.00 35.76 4.01
163 164 6.240894 AGAGGTCAATCAAACTGATAAGCAA 58.759 36.000 0.00 0.00 35.76 3.91
164 165 5.809001 AGAGGTCAATCAAACTGATAAGCA 58.191 37.500 0.00 0.00 35.76 3.91
165 166 8.443953 AATAGAGGTCAATCAAACTGATAAGC 57.556 34.615 0.00 0.00 35.76 3.09
190 191 4.499183 CTGCCACAACCACTTTACAAAAA 58.501 39.130 0.00 0.00 0.00 1.94
191 192 3.118956 CCTGCCACAACCACTTTACAAAA 60.119 43.478 0.00 0.00 0.00 2.44
192 193 2.428890 CCTGCCACAACCACTTTACAAA 59.571 45.455 0.00 0.00 0.00 2.83
193 194 2.028130 CCTGCCACAACCACTTTACAA 58.972 47.619 0.00 0.00 0.00 2.41
194 195 1.213182 TCCTGCCACAACCACTTTACA 59.787 47.619 0.00 0.00 0.00 2.41
195 196 1.975660 TCCTGCCACAACCACTTTAC 58.024 50.000 0.00 0.00 0.00 2.01
196 197 2.303175 GTTCCTGCCACAACCACTTTA 58.697 47.619 0.00 0.00 0.00 1.85
197 198 1.111277 GTTCCTGCCACAACCACTTT 58.889 50.000 0.00 0.00 0.00 2.66
198 199 0.755327 GGTTCCTGCCACAACCACTT 60.755 55.000 3.51 0.00 41.65 3.16
199 200 1.152756 GGTTCCTGCCACAACCACT 60.153 57.895 3.51 0.00 41.65 4.00
200 201 2.200337 GGGTTCCTGCCACAACCAC 61.200 63.158 9.35 0.00 43.54 4.16
201 202 2.197324 GGGTTCCTGCCACAACCA 59.803 61.111 9.35 0.00 43.54 3.67
202 203 1.045911 TTTGGGTTCCTGCCACAACC 61.046 55.000 0.17 0.17 41.35 3.77
203 204 0.827368 TTTTGGGTTCCTGCCACAAC 59.173 50.000 0.00 0.00 0.00 3.32
204 205 1.573108 TTTTTGGGTTCCTGCCACAA 58.427 45.000 0.00 0.00 0.00 3.33
205 206 1.799933 ATTTTTGGGTTCCTGCCACA 58.200 45.000 0.00 0.00 0.00 4.17
206 207 4.551702 ATTATTTTTGGGTTCCTGCCAC 57.448 40.909 0.00 0.00 0.00 5.01
207 208 5.782845 AGTAATTATTTTTGGGTTCCTGCCA 59.217 36.000 0.00 0.00 0.00 4.92
208 209 6.106003 CAGTAATTATTTTTGGGTTCCTGCC 58.894 40.000 0.00 0.00 0.00 4.85
209 210 6.589907 CACAGTAATTATTTTTGGGTTCCTGC 59.410 38.462 0.00 0.00 0.00 4.85
210 211 7.039363 TCCACAGTAATTATTTTTGGGTTCCTG 60.039 37.037 5.85 0.00 0.00 3.86
211 212 7.013834 TCCACAGTAATTATTTTTGGGTTCCT 58.986 34.615 5.85 0.00 0.00 3.36
212 213 7.234661 TCCACAGTAATTATTTTTGGGTTCC 57.765 36.000 5.85 0.00 0.00 3.62
213 214 9.797556 GTATCCACAGTAATTATTTTTGGGTTC 57.202 33.333 5.85 0.00 0.00 3.62
214 215 9.541884 AGTATCCACAGTAATTATTTTTGGGTT 57.458 29.630 5.85 0.00 0.00 4.11
223 224 8.988934 CGCAAATGTAGTATCCACAGTAATTAT 58.011 33.333 0.00 0.00 0.00 1.28
224 225 8.198778 TCGCAAATGTAGTATCCACAGTAATTA 58.801 33.333 0.00 0.00 0.00 1.40
225 226 7.045416 TCGCAAATGTAGTATCCACAGTAATT 58.955 34.615 0.00 0.00 0.00 1.40
226 227 6.578944 TCGCAAATGTAGTATCCACAGTAAT 58.421 36.000 0.00 0.00 0.00 1.89
227 228 5.968254 TCGCAAATGTAGTATCCACAGTAA 58.032 37.500 0.00 0.00 0.00 2.24
228 229 5.126545 ACTCGCAAATGTAGTATCCACAGTA 59.873 40.000 0.00 0.00 0.00 2.74
229 230 4.081642 ACTCGCAAATGTAGTATCCACAGT 60.082 41.667 0.00 0.00 0.00 3.55
230 231 4.433615 ACTCGCAAATGTAGTATCCACAG 58.566 43.478 0.00 0.00 0.00 3.66
231 232 4.465632 ACTCGCAAATGTAGTATCCACA 57.534 40.909 0.00 0.00 0.00 4.17
232 233 4.868171 TGAACTCGCAAATGTAGTATCCAC 59.132 41.667 0.00 0.00 0.00 4.02
233 234 5.079689 TGAACTCGCAAATGTAGTATCCA 57.920 39.130 0.00 0.00 0.00 3.41
234 235 5.177696 GGATGAACTCGCAAATGTAGTATCC 59.822 44.000 0.00 0.00 0.00 2.59
235 236 5.107837 CGGATGAACTCGCAAATGTAGTATC 60.108 44.000 0.00 0.00 0.00 2.24
236 237 4.745125 CGGATGAACTCGCAAATGTAGTAT 59.255 41.667 0.00 0.00 0.00 2.12
237 238 4.109766 CGGATGAACTCGCAAATGTAGTA 58.890 43.478 0.00 0.00 0.00 1.82
238 239 2.930040 CGGATGAACTCGCAAATGTAGT 59.070 45.455 0.00 0.00 0.00 2.73
239 240 3.575858 CGGATGAACTCGCAAATGTAG 57.424 47.619 0.00 0.00 0.00 2.74
248 249 0.389817 TCTTGTGGCGGATGAACTCG 60.390 55.000 0.00 0.00 0.00 4.18
249 250 1.079503 GTCTTGTGGCGGATGAACTC 58.920 55.000 0.00 0.00 0.00 3.01
250 251 0.321653 GGTCTTGTGGCGGATGAACT 60.322 55.000 0.00 0.00 0.00 3.01
251 252 0.321653 AGGTCTTGTGGCGGATGAAC 60.322 55.000 0.00 0.00 0.00 3.18
252 253 0.321564 CAGGTCTTGTGGCGGATGAA 60.322 55.000 0.00 0.00 0.00 2.57
253 254 1.296392 CAGGTCTTGTGGCGGATGA 59.704 57.895 0.00 0.00 0.00 2.92
254 255 1.003355 ACAGGTCTTGTGGCGGATG 60.003 57.895 0.00 0.00 38.99 3.51
255 256 3.483587 ACAGGTCTTGTGGCGGAT 58.516 55.556 0.00 0.00 38.99 4.18
262 263 2.743718 CCCGCTCACAGGTCTTGT 59.256 61.111 0.00 0.00 41.94 3.16
263 264 2.046892 CCCCGCTCACAGGTCTTG 60.047 66.667 0.00 0.00 0.00 3.02
264 265 4.021925 GCCCCGCTCACAGGTCTT 62.022 66.667 0.00 0.00 0.00 3.01
265 266 3.602075 TAGCCCCGCTCACAGGTCT 62.602 63.158 0.00 0.00 40.44 3.85
266 267 3.075005 TAGCCCCGCTCACAGGTC 61.075 66.667 0.00 0.00 40.44 3.85
267 268 3.077556 CTAGCCCCGCTCACAGGT 61.078 66.667 0.00 0.00 40.44 4.00
268 269 3.077556 ACTAGCCCCGCTCACAGG 61.078 66.667 0.00 0.00 40.44 4.00
269 270 0.752009 TAGACTAGCCCCGCTCACAG 60.752 60.000 0.00 0.00 40.44 3.66
270 271 0.323999 TTAGACTAGCCCCGCTCACA 60.324 55.000 0.00 0.00 40.44 3.58
271 272 0.822164 TTTAGACTAGCCCCGCTCAC 59.178 55.000 0.00 0.00 40.44 3.51
272 273 1.563924 TTTTAGACTAGCCCCGCTCA 58.436 50.000 0.00 0.00 40.44 4.26
273 274 2.277969 GTTTTTAGACTAGCCCCGCTC 58.722 52.381 0.00 0.00 40.44 5.03
274 275 1.065636 GGTTTTTAGACTAGCCCCGCT 60.066 52.381 0.00 0.00 43.41 5.52
275 276 1.339342 TGGTTTTTAGACTAGCCCCGC 60.339 52.381 0.00 0.00 0.00 6.13
276 277 2.773993 TGGTTTTTAGACTAGCCCCG 57.226 50.000 0.00 0.00 0.00 5.73
277 278 6.362248 TCATATTGGTTTTTAGACTAGCCCC 58.638 40.000 0.00 0.00 0.00 5.80
278 279 7.556635 ACTTCATATTGGTTTTTAGACTAGCCC 59.443 37.037 0.00 0.00 0.00 5.19
279 280 8.398665 CACTTCATATTGGTTTTTAGACTAGCC 58.601 37.037 0.00 0.00 0.00 3.93
280 281 7.910683 GCACTTCATATTGGTTTTTAGACTAGC 59.089 37.037 0.00 0.00 0.00 3.42
281 282 8.946085 TGCACTTCATATTGGTTTTTAGACTAG 58.054 33.333 0.00 0.00 0.00 2.57
282 283 8.856153 TGCACTTCATATTGGTTTTTAGACTA 57.144 30.769 0.00 0.00 0.00 2.59
283 284 7.759489 TGCACTTCATATTGGTTTTTAGACT 57.241 32.000 0.00 0.00 0.00 3.24
286 287 9.023967 GCTTATGCACTTCATATTGGTTTTTAG 57.976 33.333 0.00 0.00 37.49 1.85
287 288 8.526978 TGCTTATGCACTTCATATTGGTTTTTA 58.473 29.630 0.00 0.00 45.31 1.52
288 289 7.385267 TGCTTATGCACTTCATATTGGTTTTT 58.615 30.769 0.00 0.00 45.31 1.94
289 290 6.934056 TGCTTATGCACTTCATATTGGTTTT 58.066 32.000 0.00 0.00 45.31 2.43
290 291 6.528537 TGCTTATGCACTTCATATTGGTTT 57.471 33.333 0.00 0.00 45.31 3.27
386 387 5.869649 AATAAAGCCCCGCTCATATTTTT 57.130 34.783 0.00 0.00 38.25 1.94
387 388 6.016276 CAGTAATAAAGCCCCGCTCATATTTT 60.016 38.462 8.86 0.00 38.25 1.82
388 389 5.473504 CAGTAATAAAGCCCCGCTCATATTT 59.526 40.000 8.86 0.00 38.25 1.40
389 390 5.003804 CAGTAATAAAGCCCCGCTCATATT 58.996 41.667 8.68 8.68 38.25 1.28
390 391 4.286032 TCAGTAATAAAGCCCCGCTCATAT 59.714 41.667 0.00 0.00 38.25 1.78
391 392 3.644265 TCAGTAATAAAGCCCCGCTCATA 59.356 43.478 0.00 0.00 38.25 2.15
392 393 2.438021 TCAGTAATAAAGCCCCGCTCAT 59.562 45.455 0.00 0.00 38.25 2.90
393 394 1.834896 TCAGTAATAAAGCCCCGCTCA 59.165 47.619 0.00 0.00 38.25 4.26
394 395 2.210961 GTCAGTAATAAAGCCCCGCTC 58.789 52.381 0.00 0.00 38.25 5.03
395 396 1.134189 GGTCAGTAATAAAGCCCCGCT 60.134 52.381 0.00 0.00 42.56 5.52
396 397 1.306148 GGTCAGTAATAAAGCCCCGC 58.694 55.000 0.00 0.00 0.00 6.13
397 398 1.489230 AGGGTCAGTAATAAAGCCCCG 59.511 52.381 0.00 0.00 36.86 5.73
398 399 3.664551 AAGGGTCAGTAATAAAGCCCC 57.335 47.619 0.00 0.00 36.86 5.80
399 400 5.752650 ACTAAAGGGTCAGTAATAAAGCCC 58.247 41.667 0.00 0.00 36.46 5.19
400 401 5.821470 GGACTAAAGGGTCAGTAATAAAGCC 59.179 44.000 0.00 0.00 37.91 4.35
401 402 5.821470 GGGACTAAAGGGTCAGTAATAAAGC 59.179 44.000 0.00 0.00 37.91 3.51
402 403 6.047231 CGGGACTAAAGGGTCAGTAATAAAG 58.953 44.000 0.00 0.00 37.91 1.85
403 404 5.104817 CCGGGACTAAAGGGTCAGTAATAAA 60.105 44.000 0.00 0.00 37.91 1.40
404 405 4.406649 CCGGGACTAAAGGGTCAGTAATAA 59.593 45.833 0.00 0.00 37.91 1.40
405 406 3.962718 CCGGGACTAAAGGGTCAGTAATA 59.037 47.826 0.00 0.00 37.91 0.98
406 407 2.770232 CCGGGACTAAAGGGTCAGTAAT 59.230 50.000 0.00 0.00 37.91 1.89
407 408 2.181975 CCGGGACTAAAGGGTCAGTAA 58.818 52.381 0.00 0.00 37.91 2.24
408 409 1.077663 ACCGGGACTAAAGGGTCAGTA 59.922 52.381 6.32 0.00 37.91 2.74
409 410 0.178912 ACCGGGACTAAAGGGTCAGT 60.179 55.000 6.32 0.00 37.91 3.41
410 411 0.981943 AACCGGGACTAAAGGGTCAG 59.018 55.000 6.32 0.00 37.91 3.51
411 412 0.978907 GAACCGGGACTAAAGGGTCA 59.021 55.000 6.32 0.00 41.24 4.02
412 413 0.108472 CGAACCGGGACTAAAGGGTC 60.108 60.000 6.32 0.00 38.35 4.46
413 414 1.547472 CCGAACCGGGACTAAAGGGT 61.547 60.000 6.32 0.00 44.15 4.34
414 415 1.219935 CCGAACCGGGACTAAAGGG 59.780 63.158 6.32 0.00 44.15 3.95
415 416 4.926207 CCGAACCGGGACTAAAGG 57.074 61.111 6.32 0.00 44.15 3.11
431 432 3.074369 CCATTTGCCCCGGTTCCC 61.074 66.667 0.00 0.00 0.00 3.97
432 433 3.074369 CCCATTTGCCCCGGTTCC 61.074 66.667 0.00 0.00 0.00 3.62
433 434 3.770040 GCCCATTTGCCCCGGTTC 61.770 66.667 0.00 0.00 0.00 3.62
441 442 0.677842 GGATCATGAGGCCCATTTGC 59.322 55.000 0.00 0.00 31.94 3.68
442 443 0.956633 CGGATCATGAGGCCCATTTG 59.043 55.000 0.00 0.00 31.94 2.32
443 444 0.178981 CCGGATCATGAGGCCCATTT 60.179 55.000 0.00 0.00 31.94 2.32
444 445 1.457604 CCGGATCATGAGGCCCATT 59.542 57.895 0.00 0.00 31.94 3.16
445 446 2.532532 CCCGGATCATGAGGCCCAT 61.533 63.158 0.73 0.00 35.44 4.00
446 447 3.170672 CCCGGATCATGAGGCCCA 61.171 66.667 0.73 0.00 0.00 5.36
447 448 2.849162 TCCCGGATCATGAGGCCC 60.849 66.667 0.73 1.52 0.00 5.80
448 449 1.983119 TTGTCCCGGATCATGAGGCC 61.983 60.000 0.73 4.39 0.00 5.19
449 450 0.107214 TTTGTCCCGGATCATGAGGC 60.107 55.000 0.73 0.00 0.00 4.70
450 451 2.158769 TCATTTGTCCCGGATCATGAGG 60.159 50.000 0.73 0.00 0.00 3.86
451 452 3.136763 CTCATTTGTCCCGGATCATGAG 58.863 50.000 0.73 14.51 0.00 2.90
452 453 2.746142 GCTCATTTGTCCCGGATCATGA 60.746 50.000 0.73 0.00 0.00 3.07
453 454 1.605710 GCTCATTTGTCCCGGATCATG 59.394 52.381 0.73 0.00 0.00 3.07
454 455 1.212688 TGCTCATTTGTCCCGGATCAT 59.787 47.619 0.73 0.00 0.00 2.45
455 456 0.617935 TGCTCATTTGTCCCGGATCA 59.382 50.000 0.73 0.00 0.00 2.92
456 457 1.972872 ATGCTCATTTGTCCCGGATC 58.027 50.000 0.73 0.00 0.00 3.36
457 458 2.442236 AATGCTCATTTGTCCCGGAT 57.558 45.000 0.73 0.00 0.00 4.18
458 459 2.214376 AAATGCTCATTTGTCCCGGA 57.786 45.000 0.73 0.00 39.36 5.14
459 460 3.056607 AGAAAAATGCTCATTTGTCCCGG 60.057 43.478 17.44 0.00 43.02 5.73
460 461 4.178545 AGAAAAATGCTCATTTGTCCCG 57.821 40.909 17.44 0.00 43.02 5.14
461 462 6.272822 AGTAGAAAAATGCTCATTTGTCCC 57.727 37.500 17.44 11.09 43.02 4.46
462 463 7.965107 CACTAGTAGAAAAATGCTCATTTGTCC 59.035 37.037 17.44 7.43 43.02 4.02
463 464 8.507249 ACACTAGTAGAAAAATGCTCATTTGTC 58.493 33.333 14.61 14.61 42.57 3.18
464 465 8.396272 ACACTAGTAGAAAAATGCTCATTTGT 57.604 30.769 3.59 3.37 40.57 2.83
482 483 9.473640 GTTAACAAACTTAGCTTCTACACTAGT 57.526 33.333 0.00 0.00 0.00 2.57
483 484 9.694137 AGTTAACAAACTTAGCTTCTACACTAG 57.306 33.333 8.61 0.00 0.00 2.57
485 486 8.827677 CAAGTTAACAAACTTAGCTTCTACACT 58.172 33.333 8.61 0.00 40.74 3.55
486 487 8.823818 TCAAGTTAACAAACTTAGCTTCTACAC 58.176 33.333 8.61 0.00 40.74 2.90
487 488 8.951787 TCAAGTTAACAAACTTAGCTTCTACA 57.048 30.769 8.61 0.00 40.74 2.74
521 527 6.897706 TTGTGAAGTGGAATGATCATTTGA 57.102 33.333 21.57 9.03 0.00 2.69
639 646 9.579768 GTTGCAACATTTCATTACAACCATATA 57.420 29.630 24.52 0.00 30.29 0.86
640 647 8.093307 TGTTGCAACATTTCATTACAACCATAT 58.907 29.630 27.96 0.00 33.95 1.78
736 743 0.456824 TGCAGAAAAACGCGTGCAAA 60.457 45.000 14.98 0.00 42.79 3.68
737 744 1.137614 TGCAGAAAAACGCGTGCAA 59.862 47.368 14.98 0.00 42.79 4.08
739 746 0.226984 CTTTGCAGAAAAACGCGTGC 59.773 50.000 14.98 11.89 36.42 5.34
740 747 1.821336 TCTTTGCAGAAAAACGCGTG 58.179 45.000 14.98 0.00 0.00 5.34
741 748 2.032799 TGATCTTTGCAGAAAAACGCGT 59.967 40.909 5.58 5.58 30.76 6.01
743 750 3.665871 GTCTGATCTTTGCAGAAAAACGC 59.334 43.478 0.00 0.00 43.39 4.84
750 760 2.071540 CAAGCGTCTGATCTTTGCAGA 58.928 47.619 0.00 0.00 39.90 4.26
760 770 2.066262 GTCGGATTTTCAAGCGTCTGA 58.934 47.619 0.00 0.00 0.00 3.27
778 788 8.704234 CACAGCTATCCGATCTAATAAAAAGTC 58.296 37.037 0.00 0.00 0.00 3.01
957 976 8.782144 CCAAATTTAGGAAGATGAGAGAATAGC 58.218 37.037 0.00 0.00 0.00 2.97
1040 1059 0.245539 CATGCAAACTTGGAGCTGGG 59.754 55.000 0.00 0.00 30.13 4.45
1084 1103 3.732212 GCAACCAGAAAGGATTGCTTTT 58.268 40.909 4.56 0.00 43.26 2.27
1119 1138 3.907130 CCATGATGGGGAGGGGGC 61.907 72.222 2.79 0.00 32.67 5.80
1253 1272 1.407618 GGAAGAAACGCAAAACCTGGT 59.592 47.619 0.00 0.00 0.00 4.00
1384 1403 9.603921 AAATTTCTCTGAAACATCACAAAACAT 57.396 25.926 0.00 0.00 0.00 2.71
1599 1618 2.630580 GGGCTAGGTTTCTCGATCTGAT 59.369 50.000 0.00 0.00 0.00 2.90
1692 1711 0.946700 TTCGGAATTGTTCGCGCTCA 60.947 50.000 5.56 0.00 0.00 4.26
1756 1775 0.979665 TGCTCTCTAGGCTGTTGCTT 59.020 50.000 0.00 0.00 39.59 3.91
1962 1981 2.251642 GCAAAGAAGGCCGACGTGT 61.252 57.895 0.00 0.00 0.00 4.49
1978 2006 0.612744 TGTCCATCACCTTCATCGCA 59.387 50.000 0.00 0.00 0.00 5.10
2373 2485 2.204034 TCCTCCCTGACCAGCACA 59.796 61.111 0.00 0.00 0.00 4.57
2522 2649 2.966732 AATCCTTCGCCGCCCTCAA 61.967 57.895 0.00 0.00 0.00 3.02
2523 2650 3.399181 AATCCTTCGCCGCCCTCA 61.399 61.111 0.00 0.00 0.00 3.86
2754 2989 2.842462 AGCGTCCACCAGTCCACA 60.842 61.111 0.00 0.00 0.00 4.17
3247 3482 5.130975 TCCATATTGATTAGTGCTCCAGTGT 59.869 40.000 0.00 0.00 0.00 3.55
3253 3488 9.277783 ACATACTTTCCATATTGATTAGTGCTC 57.722 33.333 0.00 0.00 0.00 4.26
3482 3723 5.248477 GCTAGGTGGTCTATGGATTTGGATA 59.752 44.000 0.00 0.00 0.00 2.59
3488 3729 2.628657 GTCGCTAGGTGGTCTATGGATT 59.371 50.000 0.00 0.00 0.00 3.01
3510 3751 2.557056 ACTCGCTTCAGTGCTTGTACTA 59.443 45.455 0.00 0.00 0.00 1.82
3512 3753 1.721926 GACTCGCTTCAGTGCTTGTAC 59.278 52.381 0.00 0.00 0.00 2.90
3531 3772 3.982372 GATGGCGGCGTGTCTTCGA 62.982 63.158 9.10 0.00 0.00 3.71
3539 3780 4.856801 GGGTGATGATGGCGGCGT 62.857 66.667 9.37 2.02 0.00 5.68
3547 3788 1.135094 AGCGATGAAGGGGTGATGAT 58.865 50.000 0.00 0.00 0.00 2.45
3559 3800 3.838271 GCCCGACTCCAGCGATGA 61.838 66.667 0.06 0.00 0.00 2.92
3594 3835 2.373491 GCCTTAGCACGACGACTTACG 61.373 57.143 0.00 0.00 43.02 3.18
3595 3836 1.266466 GCCTTAGCACGACGACTTAC 58.734 55.000 0.00 0.00 39.53 2.34
3596 3837 0.171903 GGCCTTAGCACGACGACTTA 59.828 55.000 0.00 0.00 42.56 2.24
3621 3869 1.680522 CTATCCTGGTGCGCTGGTCT 61.681 60.000 9.73 1.46 0.00 3.85
3636 3884 3.188159 TCATTGGTGGCGGTTACTATC 57.812 47.619 0.00 0.00 0.00 2.08
3641 3889 2.570415 TTCTTCATTGGTGGCGGTTA 57.430 45.000 0.00 0.00 0.00 2.85
3652 3900 5.353394 TCCAGCCTACGTTATTCTTCATT 57.647 39.130 0.00 0.00 0.00 2.57
3670 3918 2.027192 TCTTCGGGTTGAATCCTTCCAG 60.027 50.000 0.00 0.00 35.63 3.86
3708 3956 0.716108 GCTCGGATCTTGTCGTTGTG 59.284 55.000 0.00 0.00 0.00 3.33
3717 3965 1.281867 TGGTGGATTTGCTCGGATCTT 59.718 47.619 0.00 0.00 0.00 2.40
3741 3989 1.359475 GTGTCTCCGGCGGATCTAC 59.641 63.158 31.23 25.65 0.00 2.59
3795 4043 3.396570 CCTAGCCCCCGTTTCGGT 61.397 66.667 7.40 0.00 46.80 4.69
3829 4077 3.005539 ACGGCTGCCTGGAGATGT 61.006 61.111 17.92 1.91 0.00 3.06
3846 4094 2.359602 AGGAAGGCGAGACGACGA 60.360 61.111 0.00 0.00 41.28 4.20
3849 4097 2.701780 GCTCAGGAAGGCGAGACGA 61.702 63.158 0.00 0.00 0.00 4.20
3928 4176 1.826054 CACGGTGGTTCCTGGCAAA 60.826 57.895 0.00 0.00 0.00 3.68
3932 4180 3.901797 GAGGCACGGTGGTTCCTGG 62.902 68.421 10.60 0.00 40.09 4.45
3957 4205 1.528542 CGTCTCCGATGGCCCTAGA 60.529 63.158 0.00 0.00 35.63 2.43
4018 4266 4.179133 TCCTCCTCCTCCAAGAAAGAAAT 58.821 43.478 0.00 0.00 0.00 2.17
4106 4354 5.357878 CACCATGGTGCATCAAATAGTTAGT 59.642 40.000 31.13 0.00 39.39 2.24
4235 4490 7.841758 GTCACTTCTTCGCGAAAGATTTTATAG 59.158 37.037 23.54 15.46 43.50 1.31
4363 4623 4.034163 TCGTACAAAAACATTCTGCAACGA 59.966 37.500 0.00 0.00 32.61 3.85
4364 4624 4.144051 GTCGTACAAAAACATTCTGCAACG 59.856 41.667 0.00 0.00 0.00 4.10
4365 4625 5.031578 TGTCGTACAAAAACATTCTGCAAC 58.968 37.500 0.00 0.00 0.00 4.17
4366 4626 5.236655 TGTCGTACAAAAACATTCTGCAA 57.763 34.783 0.00 0.00 0.00 4.08
4367 4627 4.884458 TGTCGTACAAAAACATTCTGCA 57.116 36.364 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.