Multiple sequence alignment - TraesCS1B01G149100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G149100 chr1B 100.000 3644 0 0 1 3644 221245875 221242232 0.000000e+00 6730.0
1 TraesCS1B01G149100 chr1B 97.838 185 3 1 3461 3644 481583520 481583704 5.870000e-83 318.0
2 TraesCS1B01G149100 chr1B 97.838 185 2 2 3461 3644 674014004 674013821 5.870000e-83 318.0
3 TraesCS1B01G149100 chr6A 92.340 2898 204 9 389 3277 286417573 286414685 0.000000e+00 4106.0
4 TraesCS1B01G149100 chr1A 92.273 2899 203 11 389 3277 215567028 215564141 0.000000e+00 4093.0
5 TraesCS1B01G149100 chr1A 90.134 3132 267 21 158 3277 234109524 234106423 0.000000e+00 4034.0
6 TraesCS1B01G149100 chr1A 93.082 159 8 2 1 159 201888902 201888747 2.830000e-56 230.0
7 TraesCS1B01G149100 chr1A 97.778 45 0 1 269 313 220827647 220827690 3.900000e-10 76.8
8 TraesCS1B01G149100 chr7B 92.356 2865 198 11 429 3280 311628392 311625536 0.000000e+00 4058.0
9 TraesCS1B01G149100 chr7B 98.378 185 1 2 3461 3644 714546719 714546536 1.260000e-84 324.0
10 TraesCS1B01G149100 chr7B 97.849 186 1 2 3460 3644 710578517 710578700 5.870000e-83 318.0
11 TraesCS1B01G149100 chrUn 92.310 2861 198 11 429 3277 221355948 221358798 0.000000e+00 4045.0
12 TraesCS1B01G149100 chr3A 92.203 2873 202 12 429 3288 318334397 318337260 0.000000e+00 4045.0
13 TraesCS1B01G149100 chr5A 92.238 2860 202 10 430 3277 247106130 247108981 0.000000e+00 4034.0
14 TraesCS1B01G149100 chr5A 91.670 2881 214 16 405 3277 425623316 425620454 0.000000e+00 3967.0
15 TraesCS1B01G149100 chr2A 92.033 2824 208 7 463 3277 100997602 100994787 0.000000e+00 3952.0
16 TraesCS1B01G149100 chr2A 92.105 76 2 1 389 464 100997834 100997763 1.790000e-18 104.0
17 TraesCS1B01G149100 chr4B 98.378 185 1 2 3461 3644 411607189 411607006 1.260000e-84 324.0
18 TraesCS1B01G149100 chr4B 97.838 185 2 2 3461 3644 565574405 565574588 5.870000e-83 318.0
19 TraesCS1B01G149100 chr3B 98.378 185 1 2 3461 3644 728953915 728954098 1.260000e-84 324.0
20 TraesCS1B01G149100 chr3B 91.803 183 13 1 3280 3460 386415810 386415628 1.680000e-63 254.0
21 TraesCS1B01G149100 chr6B 97.849 186 2 2 3460 3644 601105579 601105763 1.630000e-83 320.0
22 TraesCS1B01G149100 chr5B 97.354 189 2 3 3457 3644 704454937 704455123 5.870000e-83 318.0
23 TraesCS1B01G149100 chr5D 87.805 246 19 7 3223 3462 155465796 155465556 9.970000e-71 278.0
24 TraesCS1B01G149100 chr5D 92.935 184 9 3 3283 3462 269477693 269477510 7.760000e-67 265.0
25 TraesCS1B01G149100 chr3D 93.548 186 9 2 3280 3462 236623983 236623798 1.290000e-69 274.0
26 TraesCS1B01G149100 chr3D 92.473 186 11 2 3280 3462 236609983 236609798 2.790000e-66 263.0
27 TraesCS1B01G149100 chr4D 92.473 186 11 2 3280 3462 504126912 504126727 2.790000e-66 263.0
28 TraesCS1B01G149100 chr4D 91.398 186 13 2 3280 3462 213489634 213489449 6.040000e-63 252.0
29 TraesCS1B01G149100 chr4A 92.473 186 11 2 3280 3462 318816777 318816592 2.790000e-66 263.0
30 TraesCS1B01G149100 chr2D 91.935 186 12 2 3280 3462 468702326 468702141 1.300000e-64 257.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G149100 chr1B 221242232 221245875 3643 True 6730 6730 100.000 1 3644 1 chr1B.!!$R1 3643
1 TraesCS1B01G149100 chr6A 286414685 286417573 2888 True 4106 4106 92.340 389 3277 1 chr6A.!!$R1 2888
2 TraesCS1B01G149100 chr1A 215564141 215567028 2887 True 4093 4093 92.273 389 3277 1 chr1A.!!$R2 2888
3 TraesCS1B01G149100 chr1A 234106423 234109524 3101 True 4034 4034 90.134 158 3277 1 chr1A.!!$R3 3119
4 TraesCS1B01G149100 chr7B 311625536 311628392 2856 True 4058 4058 92.356 429 3280 1 chr7B.!!$R1 2851
5 TraesCS1B01G149100 chrUn 221355948 221358798 2850 False 4045 4045 92.310 429 3277 1 chrUn.!!$F1 2848
6 TraesCS1B01G149100 chr3A 318334397 318337260 2863 False 4045 4045 92.203 429 3288 1 chr3A.!!$F1 2859
7 TraesCS1B01G149100 chr5A 247106130 247108981 2851 False 4034 4034 92.238 430 3277 1 chr5A.!!$F1 2847
8 TraesCS1B01G149100 chr5A 425620454 425623316 2862 True 3967 3967 91.670 405 3277 1 chr5A.!!$R1 2872
9 TraesCS1B01G149100 chr2A 100994787 100997834 3047 True 2028 3952 92.069 389 3277 2 chr2A.!!$R1 2888

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.036388 TCCCACGAAATCAGCACTCC 60.036 55.0 0.00 0.00 0.00 3.85 F
96 97 0.251916 AAAGACATTGGATCGGCCGA 59.748 50.0 33.12 33.12 40.66 5.54 F
97 98 0.251916 AAGACATTGGATCGGCCGAA 59.748 50.0 34.66 17.01 40.66 4.30 F
98 99 0.251916 AGACATTGGATCGGCCGAAA 59.748 50.0 34.66 22.87 40.66 3.46 F
107 108 0.679960 ATCGGCCGAAAAAGAAGGGG 60.680 55.0 34.66 0.00 0.00 4.79 F
1629 1804 0.745128 AACGACGTGTTGCCCTCAAA 60.745 50.0 0.00 0.00 40.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1805 1983 0.325671 ATGTGGAGGTGGGAGATCGT 60.326 55.000 0.00 0.0 0.00 3.73 R
1870 2048 4.647853 TGGTGTGATCATAGTAGTGGGTAC 59.352 45.833 0.00 0.0 0.00 3.34 R
1940 2118 6.047870 TCAATGGGTTCACTCAAAATTGTTG 58.952 36.000 0.00 0.0 0.00 3.33 R
1997 2175 7.690454 TGATCCAAATCTGATTTACTCCCTA 57.310 36.000 14.78 0.0 32.75 3.53 R
2090 2268 8.780616 ATCATTAAACCATCCCAACATTGATA 57.219 30.769 0.00 0.0 0.00 2.15 R
3397 3581 0.034756 CACGTGGACCCATGACAAGA 59.965 55.000 14.69 0.0 36.80 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.976704 ATTGGCTCCCACGAAATCA 57.023 47.368 0.00 0.00 30.78 2.57
20 21 1.755179 ATTGGCTCCCACGAAATCAG 58.245 50.000 0.00 0.00 30.78 2.90
21 22 0.960364 TTGGCTCCCACGAAATCAGC 60.960 55.000 0.00 0.00 30.78 4.26
22 23 1.377202 GGCTCCCACGAAATCAGCA 60.377 57.895 0.00 0.00 0.00 4.41
23 24 1.648467 GGCTCCCACGAAATCAGCAC 61.648 60.000 0.00 0.00 0.00 4.40
24 25 0.674895 GCTCCCACGAAATCAGCACT 60.675 55.000 0.00 0.00 0.00 4.40
25 26 1.363744 CTCCCACGAAATCAGCACTC 58.636 55.000 0.00 0.00 0.00 3.51
26 27 0.036388 TCCCACGAAATCAGCACTCC 60.036 55.000 0.00 0.00 0.00 3.85
27 28 0.321564 CCCACGAAATCAGCACTCCA 60.322 55.000 0.00 0.00 0.00 3.86
28 29 0.798776 CCACGAAATCAGCACTCCAC 59.201 55.000 0.00 0.00 0.00 4.02
29 30 1.511850 CACGAAATCAGCACTCCACA 58.488 50.000 0.00 0.00 0.00 4.17
30 31 1.462283 CACGAAATCAGCACTCCACAG 59.538 52.381 0.00 0.00 0.00 3.66
31 32 1.070758 ACGAAATCAGCACTCCACAGT 59.929 47.619 0.00 0.00 0.00 3.55
32 33 2.146342 CGAAATCAGCACTCCACAGTT 58.854 47.619 0.00 0.00 0.00 3.16
33 34 2.549754 CGAAATCAGCACTCCACAGTTT 59.450 45.455 0.00 0.00 0.00 2.66
34 35 3.607775 CGAAATCAGCACTCCACAGTTTG 60.608 47.826 0.00 0.00 0.00 2.93
35 36 2.645838 ATCAGCACTCCACAGTTTGT 57.354 45.000 0.00 0.00 0.00 2.83
36 37 2.418368 TCAGCACTCCACAGTTTGTT 57.582 45.000 0.00 0.00 0.00 2.83
37 38 2.722094 TCAGCACTCCACAGTTTGTTT 58.278 42.857 0.00 0.00 0.00 2.83
38 39 2.423185 TCAGCACTCCACAGTTTGTTTG 59.577 45.455 0.00 0.00 0.00 2.93
39 40 1.750778 AGCACTCCACAGTTTGTTTGG 59.249 47.619 0.00 0.00 0.00 3.28
40 41 1.748493 GCACTCCACAGTTTGTTTGGA 59.252 47.619 0.00 0.00 37.07 3.53
41 42 2.165437 GCACTCCACAGTTTGTTTGGAA 59.835 45.455 0.00 0.00 38.97 3.53
42 43 3.367910 GCACTCCACAGTTTGTTTGGAAA 60.368 43.478 0.00 0.00 38.97 3.13
43 44 4.173256 CACTCCACAGTTTGTTTGGAAAC 58.827 43.478 0.00 0.00 38.97 2.78
44 45 3.829601 ACTCCACAGTTTGTTTGGAAACA 59.170 39.130 0.70 0.70 46.35 2.83
54 55 3.892284 TGTTTGGAAACAGTTCTAGCCA 58.108 40.909 0.70 0.00 43.45 4.75
55 56 4.469657 TGTTTGGAAACAGTTCTAGCCAT 58.530 39.130 0.70 0.00 43.45 4.40
56 57 4.518970 TGTTTGGAAACAGTTCTAGCCATC 59.481 41.667 0.70 0.00 43.45 3.51
57 58 3.350219 TGGAAACAGTTCTAGCCATCC 57.650 47.619 0.00 0.00 33.92 3.51
58 59 2.642311 TGGAAACAGTTCTAGCCATCCA 59.358 45.455 0.00 0.00 33.92 3.41
59 60 3.073798 TGGAAACAGTTCTAGCCATCCAA 59.926 43.478 0.00 0.00 33.06 3.53
60 61 3.691609 GGAAACAGTTCTAGCCATCCAAG 59.308 47.826 0.00 0.00 33.92 3.61
61 62 4.327680 GAAACAGTTCTAGCCATCCAAGT 58.672 43.478 0.00 0.00 0.00 3.16
62 63 4.373156 AACAGTTCTAGCCATCCAAGTT 57.627 40.909 0.00 0.00 0.00 2.66
63 64 3.679389 ACAGTTCTAGCCATCCAAGTTG 58.321 45.455 0.00 0.00 0.00 3.16
64 65 3.012518 CAGTTCTAGCCATCCAAGTTGG 58.987 50.000 16.36 16.36 39.43 3.77
77 78 4.605183 TCCAAGTTGGAGTTTGAAAAGGA 58.395 39.130 21.05 0.00 42.67 3.36
78 79 5.020132 TCCAAGTTGGAGTTTGAAAAGGAA 58.980 37.500 21.05 0.00 42.67 3.36
79 80 5.482175 TCCAAGTTGGAGTTTGAAAAGGAAA 59.518 36.000 21.05 0.00 42.67 3.13
80 81 5.812127 CCAAGTTGGAGTTTGAAAAGGAAAG 59.188 40.000 17.60 0.00 40.96 2.62
81 82 6.350949 CCAAGTTGGAGTTTGAAAAGGAAAGA 60.351 38.462 17.60 0.00 40.96 2.52
82 83 6.208988 AGTTGGAGTTTGAAAAGGAAAGAC 57.791 37.500 0.00 0.00 0.00 3.01
83 84 5.714806 AGTTGGAGTTTGAAAAGGAAAGACA 59.285 36.000 0.00 0.00 0.00 3.41
84 85 6.381133 AGTTGGAGTTTGAAAAGGAAAGACAT 59.619 34.615 0.00 0.00 0.00 3.06
85 86 6.790232 TGGAGTTTGAAAAGGAAAGACATT 57.210 33.333 0.00 0.00 0.00 2.71
86 87 6.572519 TGGAGTTTGAAAAGGAAAGACATTG 58.427 36.000 0.00 0.00 0.00 2.82
87 88 5.985530 GGAGTTTGAAAAGGAAAGACATTGG 59.014 40.000 0.00 0.00 0.00 3.16
88 89 6.183360 GGAGTTTGAAAAGGAAAGACATTGGA 60.183 38.462 0.00 0.00 0.00 3.53
89 90 7.365497 AGTTTGAAAAGGAAAGACATTGGAT 57.635 32.000 0.00 0.00 0.00 3.41
90 91 7.436933 AGTTTGAAAAGGAAAGACATTGGATC 58.563 34.615 0.00 0.00 0.00 3.36
91 92 5.627499 TGAAAAGGAAAGACATTGGATCG 57.373 39.130 0.00 0.00 0.00 3.69
92 93 4.458989 TGAAAAGGAAAGACATTGGATCGG 59.541 41.667 0.00 0.00 0.00 4.18
93 94 2.044123 AGGAAAGACATTGGATCGGC 57.956 50.000 0.00 0.00 0.00 5.54
94 95 1.025041 GGAAAGACATTGGATCGGCC 58.975 55.000 0.00 0.00 37.10 6.13
95 96 0.657840 GAAAGACATTGGATCGGCCG 59.342 55.000 22.12 22.12 40.66 6.13
96 97 0.251916 AAAGACATTGGATCGGCCGA 59.748 50.000 33.12 33.12 40.66 5.54
97 98 0.251916 AAGACATTGGATCGGCCGAA 59.748 50.000 34.66 17.01 40.66 4.30
98 99 0.251916 AGACATTGGATCGGCCGAAA 59.748 50.000 34.66 22.87 40.66 3.46
99 100 1.091537 GACATTGGATCGGCCGAAAA 58.908 50.000 34.66 25.68 40.66 2.29
100 101 1.470890 GACATTGGATCGGCCGAAAAA 59.529 47.619 34.66 25.32 40.66 1.94
101 102 1.472480 ACATTGGATCGGCCGAAAAAG 59.528 47.619 34.66 23.75 40.66 2.27
102 103 1.742831 CATTGGATCGGCCGAAAAAGA 59.257 47.619 34.66 17.49 40.66 2.52
103 104 1.898902 TTGGATCGGCCGAAAAAGAA 58.101 45.000 34.66 17.25 40.66 2.52
104 105 1.448985 TGGATCGGCCGAAAAAGAAG 58.551 50.000 34.66 0.00 40.66 2.85
105 106 0.733150 GGATCGGCCGAAAAAGAAGG 59.267 55.000 34.66 0.00 0.00 3.46
106 107 0.733150 GATCGGCCGAAAAAGAAGGG 59.267 55.000 34.66 0.00 0.00 3.95
107 108 0.679960 ATCGGCCGAAAAAGAAGGGG 60.680 55.000 34.66 0.00 0.00 4.79
108 109 1.302993 CGGCCGAAAAAGAAGGGGA 60.303 57.895 24.07 0.00 0.00 4.81
109 110 0.891904 CGGCCGAAAAAGAAGGGGAA 60.892 55.000 24.07 0.00 0.00 3.97
110 111 1.334160 GGCCGAAAAAGAAGGGGAAA 58.666 50.000 0.00 0.00 0.00 3.13
111 112 1.689813 GGCCGAAAAAGAAGGGGAAAA 59.310 47.619 0.00 0.00 0.00 2.29
112 113 2.103432 GGCCGAAAAAGAAGGGGAAAAA 59.897 45.455 0.00 0.00 0.00 1.94
133 134 7.716768 AAAAAGGTGAAAGAAAAACGTGAAA 57.283 28.000 0.00 0.00 0.00 2.69
134 135 7.716768 AAAAGGTGAAAGAAAAACGTGAAAA 57.283 28.000 0.00 0.00 0.00 2.29
135 136 7.716768 AAAGGTGAAAGAAAAACGTGAAAAA 57.283 28.000 0.00 0.00 0.00 1.94
156 157 4.929819 AAAAACAGTTCGGTAGGCATTT 57.070 36.364 0.00 0.00 0.00 2.32
182 183 2.285977 GGAAAGGACTTGTCACACGTT 58.714 47.619 3.08 0.00 0.00 3.99
205 206 7.166473 CGTTCTCTCAAAACTTTGATTTGGAAG 59.834 37.037 5.38 0.00 45.26 3.46
210 211 8.748412 TCTCAAAACTTTGATTTGGAAGAGAAA 58.252 29.630 5.38 0.00 45.26 2.52
232 235 2.036733 TCTTCACGTCAATCGAGGGTTT 59.963 45.455 0.00 0.00 42.86 3.27
312 315 5.836024 ATTGGAGTACTACTTGGTTTGGA 57.164 39.130 6.66 0.00 0.00 3.53
318 321 6.408206 GGAGTACTACTTGGTTTGGATATGCT 60.408 42.308 0.00 0.00 0.00 3.79
319 322 7.201974 GGAGTACTACTTGGTTTGGATATGCTA 60.202 40.741 0.00 0.00 0.00 3.49
320 323 8.263854 AGTACTACTTGGTTTGGATATGCTAT 57.736 34.615 0.00 0.00 0.00 2.97
321 324 9.375974 AGTACTACTTGGTTTGGATATGCTATA 57.624 33.333 0.00 0.00 0.00 1.31
322 325 9.420551 GTACTACTTGGTTTGGATATGCTATAC 57.579 37.037 0.00 0.00 0.00 1.47
323 326 8.029782 ACTACTTGGTTTGGATATGCTATACA 57.970 34.615 0.00 0.00 0.00 2.29
324 327 8.491134 ACTACTTGGTTTGGATATGCTATACAA 58.509 33.333 0.00 0.00 0.00 2.41
325 328 7.807977 ACTTGGTTTGGATATGCTATACAAG 57.192 36.000 15.33 15.33 37.99 3.16
326 329 6.772716 ACTTGGTTTGGATATGCTATACAAGG 59.227 38.462 18.51 4.47 36.75 3.61
327 330 6.508030 TGGTTTGGATATGCTATACAAGGA 57.492 37.500 0.00 0.00 0.00 3.36
383 387 0.759346 GGTCTGGTCGGCTTCCATAT 59.241 55.000 0.00 0.00 34.26 1.78
384 388 1.141053 GGTCTGGTCGGCTTCCATATT 59.859 52.381 0.00 0.00 34.26 1.28
385 389 2.421529 GGTCTGGTCGGCTTCCATATTT 60.422 50.000 0.00 0.00 34.26 1.40
386 390 3.279434 GTCTGGTCGGCTTCCATATTTT 58.721 45.455 0.00 0.00 34.26 1.82
387 391 3.694566 GTCTGGTCGGCTTCCATATTTTT 59.305 43.478 0.00 0.00 34.26 1.94
564 738 5.965922 AGAAAAAGTGAAAGGAGGTTTGTG 58.034 37.500 0.00 0.00 0.00 3.33
574 748 1.782028 GAGGTTTGTGCCACGTGTCC 61.782 60.000 15.65 5.64 0.00 4.02
638 812 1.373590 GGTGGTGTTCGCGGCATATT 61.374 55.000 6.13 0.00 0.00 1.28
647 821 3.773860 TCGCGGCATATTGTGAATTTT 57.226 38.095 6.13 0.00 0.00 1.82
677 851 2.835580 TAGGCTCGCGTCTCTAGTAT 57.164 50.000 5.77 0.00 0.00 2.12
701 875 2.034878 CTAGCATAGGACCAGCACTCA 58.965 52.381 0.00 0.00 34.22 3.41
702 876 0.829333 AGCATAGGACCAGCACTCAG 59.171 55.000 0.00 0.00 0.00 3.35
724 898 3.735746 GCCACTTTGAACGAATTTTCAGG 59.264 43.478 0.00 0.00 36.84 3.86
739 913 7.116090 CGAATTTTCAGGTTGCATTCATTAACA 59.884 33.333 0.00 0.00 0.00 2.41
752 926 7.067981 TGCATTCATTAACATGGTTGTAGCATA 59.932 33.333 0.00 0.00 34.09 3.14
801 976 4.384098 CCAGCTCCACATATTTCTACACCA 60.384 45.833 0.00 0.00 0.00 4.17
824 999 2.210116 CATACATACGTTCACCTGGCC 58.790 52.381 0.00 0.00 0.00 5.36
867 1042 3.998341 GAGTTATTTGACACCGCTGGTTA 59.002 43.478 0.00 0.00 31.02 2.85
869 1044 2.561478 ATTTGACACCGCTGGTTACT 57.439 45.000 0.00 0.00 31.02 2.24
930 1105 5.208463 TGATATTTGCTATACCGTGAGCA 57.792 39.130 5.98 5.98 46.74 4.26
983 1158 8.757164 AGGAACATTATTTTCGGATTTTGTTC 57.243 30.769 0.00 0.00 40.40 3.18
1029 1204 1.019673 CCAGAGTCAATTCATGGGCG 58.980 55.000 0.00 0.00 0.00 6.13
1037 1212 0.802494 AATTCATGGGCGTTGTCGAC 59.198 50.000 9.11 9.11 45.48 4.20
1078 1253 2.223479 CCTATGCAAATACCACAACCGC 60.223 50.000 0.00 0.00 0.00 5.68
1192 1367 6.677781 TTGAATGGGAGTTCGACATAAATC 57.322 37.500 0.00 0.00 0.00 2.17
1289 1464 7.885922 TGCTTTAGTTTGGTGGAGTGAATATTA 59.114 33.333 0.00 0.00 0.00 0.98
1335 1510 6.735556 ACCTTCTACTTGGGATGATTTGAAT 58.264 36.000 0.00 0.00 0.00 2.57
1336 1511 7.184862 ACCTTCTACTTGGGATGATTTGAATT 58.815 34.615 0.00 0.00 0.00 2.17
1350 1525 2.808523 TGAATTTTGCCATGCGACAA 57.191 40.000 0.00 0.00 0.00 3.18
1361 1536 1.898079 CATGCGACAAACATTCGTTCG 59.102 47.619 0.00 0.00 38.77 3.95
1363 1538 1.058057 GCGACAAACATTCGTTCGCC 61.058 55.000 2.95 0.00 38.96 5.54
1485 1660 6.652481 TGCATTCCTCTTTAGAAGAAAGTGAG 59.348 38.462 0.00 0.00 37.02 3.51
1569 1744 7.862274 TCATGAAGAGTGTTATCCTATGGAT 57.138 36.000 4.42 4.42 45.40 3.41
1589 1764 4.084223 GGATCGTTTGTTTCGTCTTGCTTA 60.084 41.667 0.00 0.00 0.00 3.09
1590 1765 5.390567 GGATCGTTTGTTTCGTCTTGCTTAT 60.391 40.000 0.00 0.00 0.00 1.73
1625 1800 1.886886 ATAAAACGACGTGTTGCCCT 58.113 45.000 13.72 0.00 40.84 5.19
1629 1804 0.745128 AACGACGTGTTGCCCTCAAA 60.745 50.000 0.00 0.00 40.00 2.69
1693 1868 5.209818 TGTTCCTTCAACTACTAGGTGTG 57.790 43.478 0.93 0.00 33.77 3.82
1700 1875 6.351033 CCTTCAACTACTAGGTGTGCTATGAA 60.351 42.308 0.93 0.00 33.77 2.57
1738 1913 3.404869 TGAGGACTACATCACCTCCAT 57.595 47.619 0.00 0.00 46.57 3.41
1748 1923 3.009363 ACATCACCTCCATCATGTGACAA 59.991 43.478 0.00 0.00 41.40 3.18
1750 1925 3.678289 TCACCTCCATCATGTGACAAAG 58.322 45.455 0.00 0.00 34.28 2.77
1760 1935 1.092921 TGTGACAAAGCACCACCGAC 61.093 55.000 0.00 0.00 37.99 4.79
1805 1983 9.832445 GATCATAAGAGGTAATGACAAAGGTAA 57.168 33.333 0.00 0.00 35.06 2.85
1812 1990 6.338937 AGGTAATGACAAAGGTAACGATCTC 58.661 40.000 0.00 0.00 46.39 2.75
1843 2021 5.048921 CCACATGAGTATGATGAATGCCTTC 60.049 44.000 0.00 0.00 37.73 3.46
1851 2029 7.938715 AGTATGATGAATGCCTTCTCAATTTC 58.061 34.615 3.32 0.00 32.29 2.17
1862 2040 6.436847 TGCCTTCTCAATTTCAATGAACCATA 59.563 34.615 0.00 0.00 0.00 2.74
1870 2048 6.624352 ATTTCAATGAACCATACGATGAGG 57.376 37.500 0.00 0.00 0.00 3.86
1882 2060 3.939740 ACGATGAGGTACCCACTACTA 57.060 47.619 8.74 0.00 0.00 1.82
1905 2083 8.486210 ACTATGATCACACCAGCTATTTTAGAA 58.514 33.333 0.00 0.00 0.00 2.10
1940 2118 3.940209 TTTGACTTTGCCATGTGATCC 57.060 42.857 0.00 0.00 0.00 3.36
1997 2175 4.218200 TGATGCGAAAGAACCATGTGAATT 59.782 37.500 0.00 0.00 0.00 2.17
2003 2181 5.065218 CGAAAGAACCATGTGAATTAGGGAG 59.935 44.000 0.00 0.00 0.00 4.30
2090 2268 5.014123 TGACCTCTAATCTTGGTGATGGTTT 59.986 40.000 0.00 0.00 35.21 3.27
2274 2455 0.767998 TGTCACATGTGCCCCAACTA 59.232 50.000 21.38 0.00 0.00 2.24
2383 2564 3.636764 AGGACGGCTTTGTTTTCAAGAAT 59.363 39.130 0.00 0.00 41.09 2.40
2411 2592 2.411583 TGATGAGGACATGGCTACCAT 58.588 47.619 0.00 0.00 46.37 3.55
2504 2685 8.842358 AATTATCAGGTACTTTCGTTTCTTGA 57.158 30.769 0.00 0.00 34.60 3.02
2508 2689 7.647907 TCAGGTACTTTCGTTTCTTGATAAC 57.352 36.000 0.00 0.00 34.60 1.89
2579 2760 0.757512 TTGCTTGCAATTGAAGGGCA 59.242 45.000 10.34 10.63 35.41 5.36
2616 2797 2.353011 GGTTGAACATTGGAGCATGGTG 60.353 50.000 0.00 0.00 0.00 4.17
2641 2822 1.078848 GGAGATGAAGGTGCGTGCT 60.079 57.895 0.00 0.00 0.00 4.40
2710 2891 3.562973 GCCACCATGATGACATACAAGAG 59.437 47.826 0.00 0.00 35.09 2.85
2757 2938 7.282224 TGACCTTTCATAAATTTCGTCCATAGG 59.718 37.037 0.00 0.00 0.00 2.57
2845 3027 3.716431 TGTAGGGGAAACGACTTAGGAT 58.284 45.455 0.00 0.00 0.00 3.24
2970 3152 4.085876 AGCCATCGCTGCAACTTT 57.914 50.000 0.00 0.00 46.19 2.66
2976 3158 2.413239 CCATCGCTGCAACTTTGTGTAG 60.413 50.000 0.00 0.00 34.64 2.74
3063 3245 8.531146 TCATCCATACTCGCAATATTCAGATTA 58.469 33.333 0.00 0.00 0.00 1.75
3099 3281 2.030893 TGCTTGTTCTTCGATTGCTTGG 60.031 45.455 0.00 0.00 0.00 3.61
3101 3283 3.304659 GCTTGTTCTTCGATTGCTTGGAA 60.305 43.478 0.00 0.00 0.00 3.53
3277 3461 4.820775 AGATCAGGACCTTTGCCTCTATA 58.179 43.478 0.00 0.00 32.12 1.31
3281 3465 4.406003 TCAGGACCTTTGCCTCTATAACTC 59.594 45.833 0.00 0.00 32.12 3.01
3282 3466 4.407296 CAGGACCTTTGCCTCTATAACTCT 59.593 45.833 0.00 0.00 32.12 3.24
3288 3472 7.104290 ACCTTTGCCTCTATAACTCTTTGTAC 58.896 38.462 0.00 0.00 0.00 2.90
3289 3473 6.539103 CCTTTGCCTCTATAACTCTTTGTACC 59.461 42.308 0.00 0.00 0.00 3.34
3290 3474 6.869206 TTGCCTCTATAACTCTTTGTACCT 57.131 37.500 0.00 0.00 0.00 3.08
3291 3475 7.966339 TTGCCTCTATAACTCTTTGTACCTA 57.034 36.000 0.00 0.00 0.00 3.08
3292 3476 7.966339 TGCCTCTATAACTCTTTGTACCTAA 57.034 36.000 0.00 0.00 0.00 2.69
3293 3477 8.548880 TGCCTCTATAACTCTTTGTACCTAAT 57.451 34.615 0.00 0.00 0.00 1.73
3294 3478 8.421784 TGCCTCTATAACTCTTTGTACCTAATG 58.578 37.037 0.00 0.00 0.00 1.90
3295 3479 8.639761 GCCTCTATAACTCTTTGTACCTAATGA 58.360 37.037 0.00 0.00 0.00 2.57
3313 3497 8.237811 CCTAATGAGGCATAAAGTATTTTGGT 57.762 34.615 0.00 0.00 36.21 3.67
3314 3498 8.137437 CCTAATGAGGCATAAAGTATTTTGGTG 58.863 37.037 0.00 0.00 36.21 4.17
3315 3499 7.716799 AATGAGGCATAAAGTATTTTGGTGA 57.283 32.000 0.00 0.00 40.09 4.02
3316 3500 6.757897 TGAGGCATAAAGTATTTTGGTGAG 57.242 37.500 0.00 0.00 40.09 3.51
3317 3501 5.652014 TGAGGCATAAAGTATTTTGGTGAGG 59.348 40.000 0.00 0.00 40.09 3.86
3318 3502 5.580022 AGGCATAAAGTATTTTGGTGAGGT 58.420 37.500 0.00 0.00 40.09 3.85
3319 3503 6.727394 AGGCATAAAGTATTTTGGTGAGGTA 58.273 36.000 0.00 0.00 40.09 3.08
3320 3504 6.828785 AGGCATAAAGTATTTTGGTGAGGTAG 59.171 38.462 0.00 0.00 40.09 3.18
3321 3505 6.826741 GGCATAAAGTATTTTGGTGAGGTAGA 59.173 38.462 0.00 0.00 40.09 2.59
3322 3506 7.201705 GGCATAAAGTATTTTGGTGAGGTAGAC 60.202 40.741 0.00 0.00 40.09 2.59
3323 3507 7.201705 GCATAAAGTATTTTGGTGAGGTAGACC 60.202 40.741 0.00 0.00 40.09 3.85
3324 3508 5.836024 AAGTATTTTGGTGAGGTAGACCA 57.164 39.130 0.66 0.00 41.93 4.02
3330 3514 3.764237 TGGTGAGGTAGACCAAGTTTC 57.236 47.619 0.66 0.00 40.65 2.78
3331 3515 2.036733 TGGTGAGGTAGACCAAGTTTCG 59.963 50.000 0.66 0.00 40.65 3.46
3332 3516 2.036862 GGTGAGGTAGACCAAGTTTCGT 59.963 50.000 0.66 0.00 38.89 3.85
3333 3517 3.493873 GGTGAGGTAGACCAAGTTTCGTT 60.494 47.826 0.66 0.00 38.89 3.85
3334 3518 4.124970 GTGAGGTAGACCAAGTTTCGTTT 58.875 43.478 0.66 0.00 38.89 3.60
3335 3519 4.025145 GTGAGGTAGACCAAGTTTCGTTTG 60.025 45.833 0.66 0.00 38.89 2.93
3336 3520 4.124970 GAGGTAGACCAAGTTTCGTTTGT 58.875 43.478 0.66 0.00 38.89 2.83
3337 3521 3.875134 AGGTAGACCAAGTTTCGTTTGTG 59.125 43.478 0.66 0.00 38.89 3.33
3338 3522 3.624410 GGTAGACCAAGTTTCGTTTGTGT 59.376 43.478 0.00 0.00 35.64 3.72
3339 3523 4.260497 GGTAGACCAAGTTTCGTTTGTGTC 60.260 45.833 0.00 0.00 35.64 3.67
3340 3524 2.681344 AGACCAAGTTTCGTTTGTGTCC 59.319 45.455 0.00 0.00 31.68 4.02
3341 3525 2.420722 GACCAAGTTTCGTTTGTGTCCA 59.579 45.455 0.00 0.00 0.00 4.02
3342 3526 3.020984 ACCAAGTTTCGTTTGTGTCCAT 58.979 40.909 0.00 0.00 0.00 3.41
3343 3527 4.200874 ACCAAGTTTCGTTTGTGTCCATA 58.799 39.130 0.00 0.00 0.00 2.74
3344 3528 4.825085 ACCAAGTTTCGTTTGTGTCCATAT 59.175 37.500 0.00 0.00 0.00 1.78
3345 3529 5.153513 CCAAGTTTCGTTTGTGTCCATATG 58.846 41.667 0.00 0.00 0.00 1.78
3346 3530 4.419522 AGTTTCGTTTGTGTCCATATGC 57.580 40.909 0.00 0.00 0.00 3.14
3347 3531 3.818210 AGTTTCGTTTGTGTCCATATGCA 59.182 39.130 0.00 0.00 0.00 3.96
3348 3532 4.458989 AGTTTCGTTTGTGTCCATATGCAT 59.541 37.500 3.79 3.79 0.00 3.96
3349 3533 5.645929 AGTTTCGTTTGTGTCCATATGCATA 59.354 36.000 9.27 9.27 0.00 3.14
3350 3534 6.318648 AGTTTCGTTTGTGTCCATATGCATAT 59.681 34.615 13.63 13.63 0.00 1.78
3351 3535 5.922739 TCGTTTGTGTCCATATGCATATC 57.077 39.130 16.46 6.59 0.00 1.63
3352 3536 5.363939 TCGTTTGTGTCCATATGCATATCA 58.636 37.500 16.46 9.14 0.00 2.15
3353 3537 5.819901 TCGTTTGTGTCCATATGCATATCAA 59.180 36.000 16.46 13.65 0.00 2.57
3354 3538 6.018016 TCGTTTGTGTCCATATGCATATCAAG 60.018 38.462 16.46 8.63 0.00 3.02
3355 3539 6.238456 CGTTTGTGTCCATATGCATATCAAGT 60.238 38.462 16.46 0.00 0.00 3.16
3356 3540 7.042119 CGTTTGTGTCCATATGCATATCAAGTA 60.042 37.037 16.46 1.65 0.00 2.24
3357 3541 7.967890 TTGTGTCCATATGCATATCAAGTAG 57.032 36.000 16.46 4.52 0.00 2.57
3358 3542 6.466812 TGTGTCCATATGCATATCAAGTAGG 58.533 40.000 16.46 13.18 0.00 3.18
3359 3543 6.269769 TGTGTCCATATGCATATCAAGTAGGA 59.730 38.462 16.46 15.16 0.00 2.94
3360 3544 7.161404 GTGTCCATATGCATATCAAGTAGGAA 58.839 38.462 16.46 7.48 0.00 3.36
3361 3545 7.332926 GTGTCCATATGCATATCAAGTAGGAAG 59.667 40.741 16.46 1.73 0.00 3.46
3362 3546 6.820656 GTCCATATGCATATCAAGTAGGAAGG 59.179 42.308 16.46 10.49 0.00 3.46
3363 3547 6.730507 TCCATATGCATATCAAGTAGGAAGGA 59.269 38.462 16.46 12.50 0.00 3.36
3364 3548 7.046652 CCATATGCATATCAAGTAGGAAGGAG 58.953 42.308 16.46 0.63 0.00 3.69
3365 3549 7.310921 CCATATGCATATCAAGTAGGAAGGAGT 60.311 40.741 16.46 0.00 0.00 3.85
3366 3550 5.957771 TGCATATCAAGTAGGAAGGAGTT 57.042 39.130 0.00 0.00 0.00 3.01
3367 3551 5.918608 TGCATATCAAGTAGGAAGGAGTTC 58.081 41.667 0.00 0.00 0.00 3.01
3368 3552 5.425217 TGCATATCAAGTAGGAAGGAGTTCA 59.575 40.000 0.00 0.00 33.93 3.18
3369 3553 5.755861 GCATATCAAGTAGGAAGGAGTTCAC 59.244 44.000 0.00 0.00 33.93 3.18
3370 3554 4.828072 ATCAAGTAGGAAGGAGTTCACC 57.172 45.455 0.00 0.00 33.93 4.02
3371 3555 3.858135 TCAAGTAGGAAGGAGTTCACCT 58.142 45.455 0.00 0.00 42.69 4.00
3372 3556 3.833070 TCAAGTAGGAAGGAGTTCACCTC 59.167 47.826 0.00 0.00 39.62 3.85
3373 3557 2.448453 AGTAGGAAGGAGTTCACCTCG 58.552 52.381 0.00 0.00 41.46 4.63
3374 3558 1.477295 GTAGGAAGGAGTTCACCTCGG 59.523 57.143 0.00 0.00 41.46 4.63
3375 3559 0.178929 AGGAAGGAGTTCACCTCGGT 60.179 55.000 0.00 0.00 41.46 4.69
3376 3560 0.685660 GGAAGGAGTTCACCTCGGTT 59.314 55.000 0.00 0.00 41.46 4.44
3377 3561 1.071857 GGAAGGAGTTCACCTCGGTTT 59.928 52.381 0.00 0.00 41.46 3.27
3378 3562 2.414806 GAAGGAGTTCACCTCGGTTTC 58.585 52.381 0.00 0.00 41.46 2.78
3379 3563 0.685660 AGGAGTTCACCTCGGTTTCC 59.314 55.000 0.00 0.00 41.46 3.13
3380 3564 0.395312 GGAGTTCACCTCGGTTTCCA 59.605 55.000 0.00 0.00 41.46 3.53
3381 3565 1.003233 GGAGTTCACCTCGGTTTCCAT 59.997 52.381 0.00 0.00 41.46 3.41
3382 3566 2.552373 GGAGTTCACCTCGGTTTCCATT 60.552 50.000 0.00 0.00 41.46 3.16
3383 3567 2.484264 GAGTTCACCTCGGTTTCCATTG 59.516 50.000 0.00 0.00 0.00 2.82
3384 3568 1.068541 GTTCACCTCGGTTTCCATTGC 60.069 52.381 0.00 0.00 0.00 3.56
3385 3569 0.109532 TCACCTCGGTTTCCATTGCA 59.890 50.000 0.00 0.00 0.00 4.08
3386 3570 0.240945 CACCTCGGTTTCCATTGCAC 59.759 55.000 0.00 0.00 0.00 4.57
3387 3571 1.234615 ACCTCGGTTTCCATTGCACG 61.235 55.000 0.00 0.00 0.00 5.34
3388 3572 1.234615 CCTCGGTTTCCATTGCACGT 61.235 55.000 0.00 0.00 0.00 4.49
3389 3573 0.110238 CTCGGTTTCCATTGCACGTG 60.110 55.000 12.28 12.28 0.00 4.49
3390 3574 1.081509 CGGTTTCCATTGCACGTGG 60.082 57.895 18.88 10.44 38.11 4.94
3391 3575 1.791103 CGGTTTCCATTGCACGTGGT 61.791 55.000 18.88 0.00 37.96 4.16
3392 3576 0.039527 GGTTTCCATTGCACGTGGTC 60.040 55.000 18.88 1.42 37.96 4.02
3393 3577 0.951558 GTTTCCATTGCACGTGGTCT 59.048 50.000 18.88 0.00 37.96 3.85
3394 3578 2.147958 GTTTCCATTGCACGTGGTCTA 58.852 47.619 18.88 0.00 37.96 2.59
3395 3579 2.093306 TTCCATTGCACGTGGTCTAG 57.907 50.000 18.88 0.00 37.96 2.43
3396 3580 0.391130 TCCATTGCACGTGGTCTAGC 60.391 55.000 18.88 1.41 37.96 3.42
3397 3581 0.391661 CCATTGCACGTGGTCTAGCT 60.392 55.000 18.88 0.00 31.96 3.32
3398 3582 1.002366 CATTGCACGTGGTCTAGCTC 58.998 55.000 18.88 0.00 0.00 4.09
3399 3583 0.898320 ATTGCACGTGGTCTAGCTCT 59.102 50.000 18.88 0.00 0.00 4.09
3400 3584 0.679505 TTGCACGTGGTCTAGCTCTT 59.320 50.000 18.88 0.00 0.00 2.85
3401 3585 0.038251 TGCACGTGGTCTAGCTCTTG 60.038 55.000 18.88 0.00 0.00 3.02
3402 3586 0.038159 GCACGTGGTCTAGCTCTTGT 60.038 55.000 18.88 0.00 0.00 3.16
3403 3587 1.983972 CACGTGGTCTAGCTCTTGTC 58.016 55.000 7.95 0.00 0.00 3.18
3404 3588 1.269723 CACGTGGTCTAGCTCTTGTCA 59.730 52.381 7.95 0.00 0.00 3.58
3405 3589 2.094494 CACGTGGTCTAGCTCTTGTCAT 60.094 50.000 7.95 0.00 0.00 3.06
3406 3590 2.094494 ACGTGGTCTAGCTCTTGTCATG 60.094 50.000 0.00 0.00 0.00 3.07
3407 3591 2.736719 CGTGGTCTAGCTCTTGTCATGG 60.737 54.545 0.00 0.00 0.00 3.66
3408 3592 1.833630 TGGTCTAGCTCTTGTCATGGG 59.166 52.381 0.00 0.00 0.00 4.00
3409 3593 1.834263 GGTCTAGCTCTTGTCATGGGT 59.166 52.381 0.00 0.00 0.00 4.51
3410 3594 2.159028 GGTCTAGCTCTTGTCATGGGTC 60.159 54.545 0.00 0.00 0.00 4.46
3411 3595 2.111384 TCTAGCTCTTGTCATGGGTCC 58.889 52.381 0.00 0.00 0.00 4.46
3412 3596 1.833630 CTAGCTCTTGTCATGGGTCCA 59.166 52.381 0.00 0.00 0.00 4.02
3413 3597 0.326264 AGCTCTTGTCATGGGTCCAC 59.674 55.000 0.00 0.00 0.00 4.02
3414 3598 1.021390 GCTCTTGTCATGGGTCCACG 61.021 60.000 0.00 0.00 0.00 4.94
3415 3599 0.321671 CTCTTGTCATGGGTCCACGT 59.678 55.000 0.00 0.00 0.00 4.49
3416 3600 0.034756 TCTTGTCATGGGTCCACGTG 59.965 55.000 9.08 9.08 0.00 4.49
3417 3601 0.955428 CTTGTCATGGGTCCACGTGG 60.955 60.000 29.26 29.26 0.00 4.94
3418 3602 2.746277 GTCATGGGTCCACGTGGC 60.746 66.667 30.25 23.00 34.44 5.01
3419 3603 3.245346 TCATGGGTCCACGTGGCA 61.245 61.111 30.25 21.76 34.44 4.92
3420 3604 3.055719 CATGGGTCCACGTGGCAC 61.056 66.667 30.25 24.53 34.44 5.01
3421 3605 3.249189 ATGGGTCCACGTGGCACT 61.249 61.111 30.25 12.41 34.44 4.40
3422 3606 2.829384 ATGGGTCCACGTGGCACTT 61.829 57.895 30.25 19.61 34.44 3.16
3423 3607 2.978010 GGGTCCACGTGGCACTTG 60.978 66.667 30.25 16.47 34.44 3.16
3424 3608 2.110213 GGTCCACGTGGCACTTGA 59.890 61.111 30.25 8.69 34.44 3.02
3425 3609 1.302511 GGTCCACGTGGCACTTGAT 60.303 57.895 30.25 0.25 34.44 2.57
3426 3610 0.036765 GGTCCACGTGGCACTTGATA 60.037 55.000 30.25 7.02 34.44 2.15
3427 3611 1.406887 GGTCCACGTGGCACTTGATAT 60.407 52.381 30.25 0.00 34.44 1.63
3428 3612 1.665679 GTCCACGTGGCACTTGATATG 59.334 52.381 30.25 8.49 34.44 1.78
3429 3613 1.277842 TCCACGTGGCACTTGATATGT 59.722 47.619 30.25 5.99 34.44 2.29
3430 3614 2.083774 CCACGTGGCACTTGATATGTT 58.916 47.619 24.02 0.00 0.00 2.71
3431 3615 2.159531 CCACGTGGCACTTGATATGTTG 60.160 50.000 24.02 3.09 0.00 3.33
3432 3616 2.083774 ACGTGGCACTTGATATGTTGG 58.916 47.619 16.72 0.00 0.00 3.77
3433 3617 2.083774 CGTGGCACTTGATATGTTGGT 58.916 47.619 16.72 0.00 0.00 3.67
3434 3618 2.159531 CGTGGCACTTGATATGTTGGTG 60.160 50.000 16.72 0.00 0.00 4.17
3435 3619 2.819608 GTGGCACTTGATATGTTGGTGT 59.180 45.455 11.13 0.00 0.00 4.16
3436 3620 4.006989 GTGGCACTTGATATGTTGGTGTA 58.993 43.478 11.13 0.00 0.00 2.90
3437 3621 4.094887 GTGGCACTTGATATGTTGGTGTAG 59.905 45.833 11.13 0.00 0.00 2.74
3438 3622 4.019771 TGGCACTTGATATGTTGGTGTAGA 60.020 41.667 0.00 0.00 0.00 2.59
3439 3623 4.572389 GGCACTTGATATGTTGGTGTAGAG 59.428 45.833 0.00 0.00 0.00 2.43
3440 3624 5.178797 GCACTTGATATGTTGGTGTAGAGT 58.821 41.667 0.00 0.00 0.00 3.24
3441 3625 5.292101 GCACTTGATATGTTGGTGTAGAGTC 59.708 44.000 0.00 0.00 0.00 3.36
3442 3626 5.812642 CACTTGATATGTTGGTGTAGAGTCC 59.187 44.000 0.00 0.00 0.00 3.85
3443 3627 5.483937 ACTTGATATGTTGGTGTAGAGTCCA 59.516 40.000 0.00 0.00 0.00 4.02
3444 3628 6.156949 ACTTGATATGTTGGTGTAGAGTCCAT 59.843 38.462 0.00 0.00 33.50 3.41
3445 3629 5.917462 TGATATGTTGGTGTAGAGTCCATG 58.083 41.667 0.00 0.00 33.50 3.66
3446 3630 3.634397 ATGTTGGTGTAGAGTCCATGG 57.366 47.619 4.97 4.97 33.50 3.66
3447 3631 1.628340 TGTTGGTGTAGAGTCCATGGG 59.372 52.381 13.02 0.00 33.50 4.00
3448 3632 1.065418 GTTGGTGTAGAGTCCATGGGG 60.065 57.143 13.02 0.00 33.50 4.96
3449 3633 0.415830 TGGTGTAGAGTCCATGGGGA 59.584 55.000 13.02 0.00 42.29 4.81
3459 3643 2.211141 TCCATGGGGATGATGGAAGA 57.789 50.000 13.02 0.00 45.25 2.87
3460 3644 2.722119 TCCATGGGGATGATGGAAGAT 58.278 47.619 13.02 0.00 45.25 2.40
3461 3645 2.377531 TCCATGGGGATGATGGAAGATG 59.622 50.000 13.02 0.00 45.25 2.90
3462 3646 2.109480 CCATGGGGATGATGGAAGATGT 59.891 50.000 2.85 0.00 42.81 3.06
3463 3647 3.437491 CCATGGGGATGATGGAAGATGTT 60.437 47.826 2.85 0.00 42.81 2.71
3464 3648 3.301794 TGGGGATGATGGAAGATGTTG 57.698 47.619 0.00 0.00 0.00 3.33
3465 3649 2.091720 TGGGGATGATGGAAGATGTTGG 60.092 50.000 0.00 0.00 0.00 3.77
3466 3650 2.590821 GGGATGATGGAAGATGTTGGG 58.409 52.381 0.00 0.00 0.00 4.12
3467 3651 2.590821 GGATGATGGAAGATGTTGGGG 58.409 52.381 0.00 0.00 0.00 4.96
3468 3652 2.175499 GGATGATGGAAGATGTTGGGGA 59.825 50.000 0.00 0.00 0.00 4.81
3469 3653 3.373001 GGATGATGGAAGATGTTGGGGAA 60.373 47.826 0.00 0.00 0.00 3.97
3470 3654 3.085952 TGATGGAAGATGTTGGGGAAC 57.914 47.619 0.00 0.00 0.00 3.62
3471 3655 2.378208 TGATGGAAGATGTTGGGGAACA 59.622 45.455 0.00 0.00 37.05 3.18
3472 3656 3.011595 TGATGGAAGATGTTGGGGAACAT 59.988 43.478 0.06 0.06 45.32 2.71
3473 3657 4.229353 TGATGGAAGATGTTGGGGAACATA 59.771 41.667 0.00 0.00 42.92 2.29
3474 3658 4.235079 TGGAAGATGTTGGGGAACATAG 57.765 45.455 0.00 0.00 42.92 2.23
3475 3659 3.591527 TGGAAGATGTTGGGGAACATAGT 59.408 43.478 0.00 0.00 42.92 2.12
3476 3660 4.785914 TGGAAGATGTTGGGGAACATAGTA 59.214 41.667 0.00 0.00 42.92 1.82
3477 3661 5.251932 TGGAAGATGTTGGGGAACATAGTAA 59.748 40.000 0.00 0.00 42.92 2.24
3478 3662 6.069088 TGGAAGATGTTGGGGAACATAGTAAT 60.069 38.462 0.00 0.00 42.92 1.89
3479 3663 6.833933 GGAAGATGTTGGGGAACATAGTAATT 59.166 38.462 0.00 0.00 42.92 1.40
3480 3664 7.342026 GGAAGATGTTGGGGAACATAGTAATTT 59.658 37.037 0.00 0.00 42.92 1.82
3481 3665 7.881775 AGATGTTGGGGAACATAGTAATTTC 57.118 36.000 0.00 0.00 42.92 2.17
3482 3666 7.410174 AGATGTTGGGGAACATAGTAATTTCA 58.590 34.615 0.00 0.00 42.92 2.69
3483 3667 7.893302 AGATGTTGGGGAACATAGTAATTTCAA 59.107 33.333 0.00 0.00 42.92 2.69
3484 3668 7.841282 TGTTGGGGAACATAGTAATTTCAAA 57.159 32.000 0.00 0.00 0.00 2.69
3485 3669 8.251383 TGTTGGGGAACATAGTAATTTCAAAA 57.749 30.769 0.00 0.00 0.00 2.44
3486 3670 8.705594 TGTTGGGGAACATAGTAATTTCAAAAA 58.294 29.630 0.00 0.00 0.00 1.94
3504 3688 0.519961 AAAATTCCCTACGCACACGC 59.480 50.000 0.00 0.00 45.53 5.34
3505 3689 0.604243 AAATTCCCTACGCACACGCA 60.604 50.000 0.00 0.00 45.53 5.24
3506 3690 0.604243 AATTCCCTACGCACACGCAA 60.604 50.000 0.00 0.00 45.53 4.85
3507 3691 1.019278 ATTCCCTACGCACACGCAAG 61.019 55.000 0.00 0.00 45.53 4.01
3508 3692 2.048597 CCCTACGCACACGCAAGA 60.049 61.111 0.00 0.00 45.53 3.02
3509 3693 1.447838 CCCTACGCACACGCAAGAT 60.448 57.895 0.00 0.00 45.53 2.40
3510 3694 1.421410 CCCTACGCACACGCAAGATC 61.421 60.000 0.00 0.00 45.53 2.75
3511 3695 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
3512 3696 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
3513 3697 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
3514 3698 0.950555 ACGCACACGCAAGATCATGT 60.951 50.000 0.00 0.00 45.53 3.21
3515 3699 0.519792 CGCACACGCAAGATCATGTG 60.520 55.000 9.82 9.82 41.80 3.21
3516 3700 0.798159 GCACACGCAAGATCATGTGA 59.202 50.000 17.70 0.00 41.52 3.58
3517 3701 1.399440 GCACACGCAAGATCATGTGAT 59.601 47.619 17.70 3.24 41.52 3.06
3518 3702 2.790123 GCACACGCAAGATCATGTGATG 60.790 50.000 17.70 14.83 41.52 3.07
3519 3703 1.399440 ACACGCAAGATCATGTGATGC 59.601 47.619 17.70 6.12 43.62 3.91
3520 3704 1.399089 CACGCAAGATCATGTGATGCA 59.601 47.619 17.70 0.00 43.62 3.96
3521 3705 2.032924 CACGCAAGATCATGTGATGCAT 59.967 45.455 17.70 0.00 43.62 3.96
3522 3706 3.249080 CACGCAAGATCATGTGATGCATA 59.751 43.478 17.70 0.00 43.62 3.14
3523 3707 3.497262 ACGCAAGATCATGTGATGCATAG 59.503 43.478 17.70 0.00 43.62 2.23
3524 3708 3.667166 CGCAAGATCATGTGATGCATAGC 60.667 47.826 5.58 0.00 43.02 2.97
3525 3709 3.252458 GCAAGATCATGTGATGCATAGCA 59.748 43.478 0.00 1.62 44.86 3.49
3526 3710 4.261447 GCAAGATCATGTGATGCATAGCAA 60.261 41.667 0.00 0.00 43.62 3.91
3527 3711 5.212934 CAAGATCATGTGATGCATAGCAAC 58.787 41.667 0.00 0.00 43.62 4.17
3528 3712 3.497262 AGATCATGTGATGCATAGCAACG 59.503 43.478 0.00 0.00 43.62 4.10
3529 3713 2.903798 TCATGTGATGCATAGCAACGA 58.096 42.857 0.00 0.66 43.62 3.85
3530 3714 2.867975 TCATGTGATGCATAGCAACGAG 59.132 45.455 0.00 0.00 43.62 4.18
3531 3715 2.671130 TGTGATGCATAGCAACGAGA 57.329 45.000 0.00 0.00 43.62 4.04
3532 3716 2.543641 TGTGATGCATAGCAACGAGAG 58.456 47.619 0.00 0.00 43.62 3.20
3533 3717 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
3534 3718 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
3535 3719 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
3536 3720 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
3537 3721 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
3538 3722 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
3539 3723 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
3540 3724 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
3541 3725 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
3542 3726 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
3543 3727 1.835494 CAACGAGAGGGGAGAGTGTA 58.165 55.000 0.00 0.00 0.00 2.90
3544 3728 2.168496 CAACGAGAGGGGAGAGTGTAA 58.832 52.381 0.00 0.00 0.00 2.41
3545 3729 2.761208 CAACGAGAGGGGAGAGTGTAAT 59.239 50.000 0.00 0.00 0.00 1.89
3546 3730 2.657143 ACGAGAGGGGAGAGTGTAATC 58.343 52.381 0.00 0.00 0.00 1.75
3547 3731 2.242708 ACGAGAGGGGAGAGTGTAATCT 59.757 50.000 0.00 0.00 0.00 2.40
3548 3732 3.458857 ACGAGAGGGGAGAGTGTAATCTA 59.541 47.826 0.00 0.00 0.00 1.98
3549 3733 3.816523 CGAGAGGGGAGAGTGTAATCTAC 59.183 52.174 0.00 0.00 0.00 2.59
3550 3734 4.686396 CGAGAGGGGAGAGTGTAATCTACA 60.686 50.000 0.00 0.00 31.07 2.74
3551 3735 5.390387 GAGAGGGGAGAGTGTAATCTACAT 58.610 45.833 0.00 0.00 41.34 2.29
3552 3736 6.532119 AGAGGGGAGAGTGTAATCTACATA 57.468 41.667 0.00 0.00 41.34 2.29
3553 3737 6.308566 AGAGGGGAGAGTGTAATCTACATAC 58.691 44.000 0.00 0.00 41.34 2.39
3554 3738 5.395611 AGGGGAGAGTGTAATCTACATACC 58.604 45.833 0.00 0.00 41.34 2.73
3555 3739 4.527427 GGGGAGAGTGTAATCTACATACCC 59.473 50.000 0.00 0.00 41.34 3.69
3556 3740 5.395611 GGGAGAGTGTAATCTACATACCCT 58.604 45.833 0.00 0.00 41.34 4.34
3557 3741 5.839606 GGGAGAGTGTAATCTACATACCCTT 59.160 44.000 0.00 0.00 41.34 3.95
3558 3742 6.239345 GGGAGAGTGTAATCTACATACCCTTG 60.239 46.154 0.00 0.00 41.34 3.61
3559 3743 6.324254 GGAGAGTGTAATCTACATACCCTTGT 59.676 42.308 0.00 0.00 41.34 3.16
3560 3744 7.504911 GGAGAGTGTAATCTACATACCCTTGTA 59.495 40.741 0.00 0.00 41.34 2.41
3561 3745 8.466617 AGAGTGTAATCTACATACCCTTGTAG 57.533 38.462 5.47 5.47 46.85 2.74
3569 3753 4.467198 ACATACCCTTGTAGACCGAAAG 57.533 45.455 0.00 0.00 0.00 2.62
3570 3754 3.195661 CATACCCTTGTAGACCGAAAGC 58.804 50.000 0.00 0.00 0.00 3.51
3571 3755 0.037605 ACCCTTGTAGACCGAAAGCG 60.038 55.000 0.00 0.00 37.24 4.68
3588 3772 3.921081 CGGAAGCGTTAGAACAACG 57.079 52.632 5.22 5.22 45.56 4.10
3595 3779 0.854062 CGTTAGAACAACGCGGTTGA 59.146 50.000 22.26 2.82 45.28 3.18
3596 3780 1.458064 CGTTAGAACAACGCGGTTGAT 59.542 47.619 22.26 13.85 45.28 2.57
3597 3781 2.720590 CGTTAGAACAACGCGGTTGATG 60.721 50.000 22.26 11.18 45.28 3.07
3598 3782 2.157834 TAGAACAACGCGGTTGATGT 57.842 45.000 22.26 14.25 45.28 3.06
3599 3783 2.157834 AGAACAACGCGGTTGATGTA 57.842 45.000 22.26 0.00 45.28 2.29
3600 3784 2.066262 AGAACAACGCGGTTGATGTAG 58.934 47.619 22.26 1.41 45.28 2.74
3601 3785 1.796459 GAACAACGCGGTTGATGTAGT 59.204 47.619 22.26 2.04 45.28 2.73
3602 3786 1.425412 ACAACGCGGTTGATGTAGTC 58.575 50.000 22.26 0.00 45.28 2.59
3603 3787 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
3604 3788 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
3605 3789 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
3606 3790 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
3607 3791 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
3608 3792 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
3609 3793 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
3610 3794 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
3611 3795 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
3612 3796 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
3613 3797 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
3614 3798 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
3632 3816 4.467084 GGCCCGACCGATCAAGCA 62.467 66.667 0.00 0.00 0.00 3.91
3633 3817 3.195698 GCCCGACCGATCAAGCAC 61.196 66.667 0.00 0.00 0.00 4.40
3634 3818 2.511600 CCCGACCGATCAAGCACC 60.512 66.667 0.00 0.00 0.00 5.01
3635 3819 2.885644 CCGACCGATCAAGCACCG 60.886 66.667 0.00 0.00 0.00 4.94
3636 3820 2.180769 CGACCGATCAAGCACCGA 59.819 61.111 0.00 0.00 0.00 4.69
3637 3821 1.445410 CGACCGATCAAGCACCGAA 60.445 57.895 0.00 0.00 0.00 4.30
3638 3822 1.011968 CGACCGATCAAGCACCGAAA 61.012 55.000 0.00 0.00 0.00 3.46
3639 3823 0.442699 GACCGATCAAGCACCGAAAC 59.557 55.000 0.00 0.00 0.00 2.78
3640 3824 0.034896 ACCGATCAAGCACCGAAACT 59.965 50.000 0.00 0.00 0.00 2.66
3641 3825 1.274167 ACCGATCAAGCACCGAAACTA 59.726 47.619 0.00 0.00 0.00 2.24
3642 3826 1.659098 CCGATCAAGCACCGAAACTAC 59.341 52.381 0.00 0.00 0.00 2.73
3643 3827 1.320555 CGATCAAGCACCGAAACTACG 59.679 52.381 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.917933 CTGATTTCGTGGGAGCCAATA 58.082 47.619 0.00 0.00 34.18 1.90
2 3 0.960364 GCTGATTTCGTGGGAGCCAA 60.960 55.000 0.00 0.00 34.18 4.52
3 4 1.377202 GCTGATTTCGTGGGAGCCA 60.377 57.895 0.00 0.00 0.00 4.75
4 5 1.377202 TGCTGATTTCGTGGGAGCC 60.377 57.895 0.00 0.00 0.00 4.70
5 6 0.674895 AGTGCTGATTTCGTGGGAGC 60.675 55.000 0.00 0.00 0.00 4.70
6 7 1.363744 GAGTGCTGATTTCGTGGGAG 58.636 55.000 0.00 0.00 0.00 4.30
7 8 0.036388 GGAGTGCTGATTTCGTGGGA 60.036 55.000 0.00 0.00 0.00 4.37
8 9 0.321564 TGGAGTGCTGATTTCGTGGG 60.322 55.000 0.00 0.00 0.00 4.61
9 10 0.798776 GTGGAGTGCTGATTTCGTGG 59.201 55.000 0.00 0.00 0.00 4.94
10 11 1.462283 CTGTGGAGTGCTGATTTCGTG 59.538 52.381 0.00 0.00 0.00 4.35
11 12 1.070758 ACTGTGGAGTGCTGATTTCGT 59.929 47.619 0.00 0.00 0.00 3.85
12 13 1.800805 ACTGTGGAGTGCTGATTTCG 58.199 50.000 0.00 0.00 0.00 3.46
13 14 3.316308 ACAAACTGTGGAGTGCTGATTTC 59.684 43.478 0.00 0.00 30.61 2.17
14 15 3.290710 ACAAACTGTGGAGTGCTGATTT 58.709 40.909 0.00 0.00 30.61 2.17
15 16 2.936202 ACAAACTGTGGAGTGCTGATT 58.064 42.857 0.00 0.00 30.61 2.57
16 17 2.645838 ACAAACTGTGGAGTGCTGAT 57.354 45.000 0.00 0.00 30.61 2.90
17 18 2.418368 AACAAACTGTGGAGTGCTGA 57.582 45.000 0.00 0.00 30.61 4.26
18 19 2.480073 CCAAACAAACTGTGGAGTGCTG 60.480 50.000 0.00 0.00 34.05 4.41
19 20 1.750778 CCAAACAAACTGTGGAGTGCT 59.249 47.619 0.00 0.00 34.05 4.40
20 21 1.748493 TCCAAACAAACTGTGGAGTGC 59.252 47.619 0.00 0.00 36.51 4.40
21 22 4.173256 GTTTCCAAACAAACTGTGGAGTG 58.827 43.478 0.00 0.00 42.29 3.51
22 23 3.829601 TGTTTCCAAACAAACTGTGGAGT 59.170 39.130 2.29 0.00 45.17 3.85
23 24 4.448537 TGTTTCCAAACAAACTGTGGAG 57.551 40.909 2.29 0.00 45.17 3.86
33 34 3.892284 TGGCTAGAACTGTTTCCAAACA 58.108 40.909 4.83 4.83 45.88 2.83
34 35 4.082733 GGATGGCTAGAACTGTTTCCAAAC 60.083 45.833 0.00 0.00 39.33 2.93
35 36 4.079253 GGATGGCTAGAACTGTTTCCAAA 58.921 43.478 0.00 0.00 31.28 3.28
36 37 3.073798 TGGATGGCTAGAACTGTTTCCAA 59.926 43.478 5.60 0.00 31.28 3.53
37 38 2.642311 TGGATGGCTAGAACTGTTTCCA 59.358 45.455 4.24 4.24 31.28 3.53
38 39 3.350219 TGGATGGCTAGAACTGTTTCC 57.650 47.619 0.00 0.00 31.28 3.13
39 40 4.327680 ACTTGGATGGCTAGAACTGTTTC 58.672 43.478 0.00 0.00 0.00 2.78
40 41 4.373156 ACTTGGATGGCTAGAACTGTTT 57.627 40.909 0.00 0.00 0.00 2.83
41 42 4.074970 CAACTTGGATGGCTAGAACTGTT 58.925 43.478 0.00 0.00 0.00 3.16
42 43 3.560025 CCAACTTGGATGGCTAGAACTGT 60.560 47.826 0.92 0.00 40.96 3.55
43 44 3.012518 CCAACTTGGATGGCTAGAACTG 58.987 50.000 0.92 0.00 40.96 3.16
44 45 2.912956 TCCAACTTGGATGGCTAGAACT 59.087 45.455 6.39 0.00 42.67 3.01
45 46 3.350219 TCCAACTTGGATGGCTAGAAC 57.650 47.619 6.39 0.00 42.67 3.01
55 56 4.605183 TCCTTTTCAAACTCCAACTTGGA 58.395 39.130 10.23 10.23 45.98 3.53
56 57 5.337578 TTCCTTTTCAAACTCCAACTTGG 57.662 39.130 0.74 0.74 39.43 3.61
57 58 6.531594 GTCTTTCCTTTTCAAACTCCAACTTG 59.468 38.462 0.00 0.00 0.00 3.16
58 59 6.210584 TGTCTTTCCTTTTCAAACTCCAACTT 59.789 34.615 0.00 0.00 0.00 2.66
59 60 5.714806 TGTCTTTCCTTTTCAAACTCCAACT 59.285 36.000 0.00 0.00 0.00 3.16
60 61 5.961272 TGTCTTTCCTTTTCAAACTCCAAC 58.039 37.500 0.00 0.00 0.00 3.77
61 62 6.790232 ATGTCTTTCCTTTTCAAACTCCAA 57.210 33.333 0.00 0.00 0.00 3.53
62 63 6.406849 CCAATGTCTTTCCTTTTCAAACTCCA 60.407 38.462 0.00 0.00 0.00 3.86
63 64 5.985530 CCAATGTCTTTCCTTTTCAAACTCC 59.014 40.000 0.00 0.00 0.00 3.85
64 65 6.805713 TCCAATGTCTTTCCTTTTCAAACTC 58.194 36.000 0.00 0.00 0.00 3.01
65 66 6.790232 TCCAATGTCTTTCCTTTTCAAACT 57.210 33.333 0.00 0.00 0.00 2.66
66 67 6.363357 CGATCCAATGTCTTTCCTTTTCAAAC 59.637 38.462 0.00 0.00 0.00 2.93
67 68 6.446318 CGATCCAATGTCTTTCCTTTTCAAA 58.554 36.000 0.00 0.00 0.00 2.69
68 69 5.048083 CCGATCCAATGTCTTTCCTTTTCAA 60.048 40.000 0.00 0.00 0.00 2.69
69 70 4.458989 CCGATCCAATGTCTTTCCTTTTCA 59.541 41.667 0.00 0.00 0.00 2.69
70 71 4.675408 GCCGATCCAATGTCTTTCCTTTTC 60.675 45.833 0.00 0.00 0.00 2.29
71 72 3.193479 GCCGATCCAATGTCTTTCCTTTT 59.807 43.478 0.00 0.00 0.00 2.27
72 73 2.755103 GCCGATCCAATGTCTTTCCTTT 59.245 45.455 0.00 0.00 0.00 3.11
73 74 2.369394 GCCGATCCAATGTCTTTCCTT 58.631 47.619 0.00 0.00 0.00 3.36
74 75 1.408822 GGCCGATCCAATGTCTTTCCT 60.409 52.381 0.00 0.00 34.01 3.36
75 76 1.025041 GGCCGATCCAATGTCTTTCC 58.975 55.000 0.00 0.00 34.01 3.13
76 77 0.657840 CGGCCGATCCAATGTCTTTC 59.342 55.000 24.07 0.00 34.01 2.62
77 78 0.251916 TCGGCCGATCCAATGTCTTT 59.748 50.000 27.28 0.00 34.01 2.52
78 79 0.251916 TTCGGCCGATCCAATGTCTT 59.748 50.000 31.56 0.00 34.01 3.01
79 80 0.251916 TTTCGGCCGATCCAATGTCT 59.748 50.000 31.56 0.00 34.01 3.41
80 81 1.091537 TTTTCGGCCGATCCAATGTC 58.908 50.000 31.56 0.00 34.01 3.06
81 82 1.472480 CTTTTTCGGCCGATCCAATGT 59.528 47.619 31.56 0.00 34.01 2.71
82 83 1.742831 TCTTTTTCGGCCGATCCAATG 59.257 47.619 31.56 21.66 34.01 2.82
83 84 2.122783 TCTTTTTCGGCCGATCCAAT 57.877 45.000 31.56 0.00 34.01 3.16
84 85 1.810151 CTTCTTTTTCGGCCGATCCAA 59.190 47.619 31.56 18.37 34.01 3.53
85 86 1.448985 CTTCTTTTTCGGCCGATCCA 58.551 50.000 31.56 12.17 34.01 3.41
86 87 0.733150 CCTTCTTTTTCGGCCGATCC 59.267 55.000 31.56 0.00 0.00 3.36
87 88 0.733150 CCCTTCTTTTTCGGCCGATC 59.267 55.000 31.56 0.00 0.00 3.69
88 89 0.679960 CCCCTTCTTTTTCGGCCGAT 60.680 55.000 31.56 0.00 0.00 4.18
89 90 1.302993 CCCCTTCTTTTTCGGCCGA 60.303 57.895 27.28 27.28 0.00 5.54
90 91 0.891904 TTCCCCTTCTTTTTCGGCCG 60.892 55.000 22.12 22.12 0.00 6.13
91 92 1.334160 TTTCCCCTTCTTTTTCGGCC 58.666 50.000 0.00 0.00 0.00 6.13
92 93 3.462483 TTTTTCCCCTTCTTTTTCGGC 57.538 42.857 0.00 0.00 0.00 5.54
109 110 7.716768 TTTCACGTTTTTCTTTCACCTTTTT 57.283 28.000 0.00 0.00 0.00 1.94
110 111 7.716768 TTTTCACGTTTTTCTTTCACCTTTT 57.283 28.000 0.00 0.00 0.00 2.27
111 112 7.716768 TTTTTCACGTTTTTCTTTCACCTTT 57.283 28.000 0.00 0.00 0.00 3.11
135 136 4.929819 AAATGCCTACCGAACTGTTTTT 57.070 36.364 0.00 0.00 0.00 1.94
136 137 4.929819 AAAATGCCTACCGAACTGTTTT 57.070 36.364 0.00 0.00 0.00 2.43
137 138 4.929819 AAAAATGCCTACCGAACTGTTT 57.070 36.364 0.00 0.00 0.00 2.83
171 172 4.250464 AGTTTTGAGAGAACGTGTGACAA 58.750 39.130 0.00 0.00 32.38 3.18
205 206 4.266502 CCTCGATTGACGTGAAGATTTCTC 59.733 45.833 0.00 0.00 43.13 2.87
210 211 1.825474 ACCCTCGATTGACGTGAAGAT 59.175 47.619 0.00 0.00 43.13 2.40
286 289 4.467198 ACCAAGTAGTACTCCAATTCGG 57.533 45.455 2.58 0.00 0.00 4.30
312 315 9.862371 CGTTTATTCTCTCCTTGTATAGCATAT 57.138 33.333 0.00 0.00 0.00 1.78
318 321 6.127281 TGCCACGTTTATTCTCTCCTTGTATA 60.127 38.462 0.00 0.00 0.00 1.47
319 322 5.116882 GCCACGTTTATTCTCTCCTTGTAT 58.883 41.667 0.00 0.00 0.00 2.29
320 323 4.020928 TGCCACGTTTATTCTCTCCTTGTA 60.021 41.667 0.00 0.00 0.00 2.41
321 324 3.244422 TGCCACGTTTATTCTCTCCTTGT 60.244 43.478 0.00 0.00 0.00 3.16
322 325 3.334691 TGCCACGTTTATTCTCTCCTTG 58.665 45.455 0.00 0.00 0.00 3.61
323 326 3.695830 TGCCACGTTTATTCTCTCCTT 57.304 42.857 0.00 0.00 0.00 3.36
324 327 3.695830 TTGCCACGTTTATTCTCTCCT 57.304 42.857 0.00 0.00 0.00 3.69
325 328 4.965119 AATTGCCACGTTTATTCTCTCC 57.035 40.909 0.00 0.00 0.00 3.71
353 356 1.067495 CGACCAGACCTCAACTTCCTC 60.067 57.143 0.00 0.00 0.00 3.71
354 357 0.969894 CGACCAGACCTCAACTTCCT 59.030 55.000 0.00 0.00 0.00 3.36
364 368 0.759346 ATATGGAAGCCGACCAGACC 59.241 55.000 0.00 0.00 40.89 3.85
511 681 3.502123 TCTCCAAAGAAATCCAACCGT 57.498 42.857 0.00 0.00 0.00 4.83
564 738 0.673644 ACAGCAATAGGACACGTGGC 60.674 55.000 21.57 18.48 0.00 5.01
593 767 7.190871 CGTATTGTTCTTTTAACCACACACTT 58.809 34.615 0.00 0.00 0.00 3.16
594 768 6.238538 CCGTATTGTTCTTTTAACCACACACT 60.239 38.462 0.00 0.00 0.00 3.55
638 812 5.008613 GCCTAAGACACAGACAAAATTCACA 59.991 40.000 0.00 0.00 0.00 3.58
647 821 0.243907 GCGAGCCTAAGACACAGACA 59.756 55.000 0.00 0.00 0.00 3.41
677 851 3.117474 AGTGCTGGTCCTATGCTAGACTA 60.117 47.826 0.00 0.00 0.00 2.59
701 875 4.499696 CCTGAAAATTCGTTCAAAGTGGCT 60.500 41.667 0.00 0.00 37.08 4.75
702 876 3.735746 CCTGAAAATTCGTTCAAAGTGGC 59.264 43.478 0.00 0.00 37.08 5.01
724 898 6.034898 GCTACAACCATGTTAATGAATGCAAC 59.965 38.462 0.00 0.00 41.05 4.17
739 913 5.674052 TGGCAAAAATATGCTACAACCAT 57.326 34.783 0.00 0.00 45.68 3.55
777 952 4.384208 GGTGTAGAAATATGTGGAGCTGGT 60.384 45.833 0.00 0.00 0.00 4.00
801 976 3.466836 CCAGGTGAACGTATGTATGCAT 58.533 45.455 3.79 3.79 39.03 3.96
867 1042 2.831770 CAGCAGGTGGTGACCAGT 59.168 61.111 3.58 0.00 45.98 4.00
869 1044 2.832778 ATGCAGCAGGTGGTGACCA 61.833 57.895 13.25 0.00 45.98 4.02
923 1098 2.151202 AGTGGTGGTAAAATGCTCACG 58.849 47.619 0.00 0.00 0.00 4.35
930 1105 6.435292 ACTACTGAGAAGTGGTGGTAAAAT 57.565 37.500 0.00 0.00 32.25 1.82
1029 1204 4.047059 TCTCCCGCGGTCGACAAC 62.047 66.667 26.12 7.46 38.10 3.32
1051 1226 3.009584 TGTGGTATTTGCATAGGTGGTGA 59.990 43.478 0.00 0.00 0.00 4.02
1078 1253 0.813610 TGTTTGTGCACCTCTCGTGG 60.814 55.000 15.69 0.00 43.24 4.94
1335 1510 2.522836 ATGTTTGTCGCATGGCAAAA 57.477 40.000 0.00 0.00 36.51 2.44
1336 1511 2.402305 GAATGTTTGTCGCATGGCAAA 58.598 42.857 0.00 0.00 32.89 3.68
1350 1525 6.285990 AGTATAATAAGGGCGAACGAATGTT 58.714 36.000 0.00 0.00 42.23 2.71
1361 1536 5.779922 TCATGTCACGAGTATAATAAGGGC 58.220 41.667 0.00 0.00 0.00 5.19
1485 1660 8.588472 CCCCAAAATCTATCCATAAAATCTTCC 58.412 37.037 0.00 0.00 0.00 3.46
1569 1744 6.528014 TTATAAGCAAGACGAAACAAACGA 57.472 33.333 0.00 0.00 34.70 3.85
1589 1764 9.394477 GTCGTTTTATTTTCTGTTCAGCTTTAT 57.606 29.630 0.00 0.00 0.00 1.40
1590 1765 7.584847 CGTCGTTTTATTTTCTGTTCAGCTTTA 59.415 33.333 0.00 0.00 0.00 1.85
1603 1778 3.067040 AGGGCAACACGTCGTTTTATTTT 59.933 39.130 0.00 0.00 34.86 1.82
1625 1800 3.378112 CACCTTGTGCTTGTTCTCTTTGA 59.622 43.478 0.00 0.00 0.00 2.69
1693 1868 5.329035 ACAATGGATGTGGTTTTCATAGC 57.671 39.130 0.00 0.00 41.93 2.97
1700 1875 3.321682 CCTCACAACAATGGATGTGGTTT 59.678 43.478 17.26 0.00 44.06 3.27
1738 1913 1.317613 GGTGGTGCTTTGTCACATGA 58.682 50.000 0.00 0.00 38.66 3.07
1760 1935 3.599730 TCAACTCAGATGTAGGCACTG 57.400 47.619 0.00 0.00 41.52 3.66
1805 1983 0.325671 ATGTGGAGGTGGGAGATCGT 60.326 55.000 0.00 0.00 0.00 3.73
1843 2021 7.696755 TCATCGTATGGTTCATTGAAATTGAG 58.303 34.615 0.00 0.00 0.00 3.02
1851 2029 4.750098 GGTACCTCATCGTATGGTTCATTG 59.250 45.833 4.06 0.00 35.48 2.82
1870 2048 4.647853 TGGTGTGATCATAGTAGTGGGTAC 59.352 45.833 0.00 0.00 0.00 3.34
1882 2060 7.497249 GTCTTCTAAAATAGCTGGTGTGATCAT 59.503 37.037 0.00 0.00 0.00 2.45
1905 2083 7.362401 GGCAAAGTCAAATCATGAACATAGTCT 60.362 37.037 0.00 0.00 40.50 3.24
1940 2118 6.047870 TCAATGGGTTCACTCAAAATTGTTG 58.952 36.000 0.00 0.00 0.00 3.33
1997 2175 7.690454 TGATCCAAATCTGATTTACTCCCTA 57.310 36.000 14.78 0.00 32.75 3.53
2090 2268 8.780616 ATCATTAAACCATCCCAACATTGATA 57.219 30.769 0.00 0.00 0.00 2.15
2383 2564 2.052468 CATGTCCTCATCATCCTCCCA 58.948 52.381 0.00 0.00 31.15 4.37
2411 2592 2.976882 GCAGGGGATATGGGTGTAACTA 59.023 50.000 0.00 0.00 36.74 2.24
2508 2689 8.634475 TCATATTCTCATGAACACTAGAAACG 57.366 34.615 0.00 0.00 34.71 3.60
2579 2760 2.301870 TCAACCTTCTTGTCCGTGCTAT 59.698 45.455 0.00 0.00 0.00 2.97
2616 2797 1.363744 CACCTTCATCTCCGTGCTTC 58.636 55.000 0.00 0.00 0.00 3.86
2641 2822 4.879598 GAACCTCCGTTCTTGTTCTCTTA 58.120 43.478 0.00 0.00 44.29 2.10
2710 2891 6.369065 GGTCATCTTGTATATTTCGTCCATCC 59.631 42.308 0.00 0.00 0.00 3.51
2757 2938 1.197264 TGGCGCAACACCGTTAATAAC 59.803 47.619 10.83 0.00 0.00 1.89
2845 3027 2.303175 GCAAGGTGGGACTAAAACACA 58.697 47.619 0.00 0.00 36.87 3.72
2886 3068 8.758834 AGGGCTATATTTATAGGGAAAAGAGT 57.241 34.615 6.72 0.00 36.90 3.24
2970 3152 3.248495 TGGACACAAACGAACTACACA 57.752 42.857 0.00 0.00 0.00 3.72
2976 3158 1.267682 GGTCGTTGGACACAAACGAAC 60.268 52.381 14.23 13.34 45.28 3.95
3122 3304 1.086067 CACGCTGGAGCACGATCAAT 61.086 55.000 0.00 0.00 42.21 2.57
3266 3450 7.253905 AGGTACAAAGAGTTATAGAGGCAAA 57.746 36.000 0.00 0.00 0.00 3.68
3277 3461 5.499004 TGCCTCATTAGGTACAAAGAGTT 57.501 39.130 0.00 0.00 45.64 3.01
3282 3466 9.914834 AATACTTTATGCCTCATTAGGTACAAA 57.085 29.630 0.00 0.00 45.64 2.83
3288 3472 8.137437 CACCAAAATACTTTATGCCTCATTAGG 58.863 37.037 0.00 0.00 46.76 2.69
3289 3473 8.902806 TCACCAAAATACTTTATGCCTCATTAG 58.097 33.333 0.00 0.00 0.00 1.73
3290 3474 8.815565 TCACCAAAATACTTTATGCCTCATTA 57.184 30.769 0.00 0.00 0.00 1.90
3291 3475 7.147846 CCTCACCAAAATACTTTATGCCTCATT 60.148 37.037 0.00 0.00 0.00 2.57
3292 3476 6.322201 CCTCACCAAAATACTTTATGCCTCAT 59.678 38.462 0.00 0.00 0.00 2.90
3293 3477 5.652014 CCTCACCAAAATACTTTATGCCTCA 59.348 40.000 0.00 0.00 0.00 3.86
3294 3478 5.652452 ACCTCACCAAAATACTTTATGCCTC 59.348 40.000 0.00 0.00 0.00 4.70
3295 3479 5.580022 ACCTCACCAAAATACTTTATGCCT 58.420 37.500 0.00 0.00 0.00 4.75
3296 3480 5.914898 ACCTCACCAAAATACTTTATGCC 57.085 39.130 0.00 0.00 0.00 4.40
3297 3481 7.201705 GGTCTACCTCACCAAAATACTTTATGC 60.202 40.741 0.00 0.00 33.63 3.14
3298 3482 7.827236 TGGTCTACCTCACCAAAATACTTTATG 59.173 37.037 0.02 0.00 41.17 1.90
3299 3483 7.924541 TGGTCTACCTCACCAAAATACTTTAT 58.075 34.615 0.02 0.00 41.17 1.40
3300 3484 7.319052 TGGTCTACCTCACCAAAATACTTTA 57.681 36.000 0.02 0.00 41.17 1.85
3301 3485 6.195600 TGGTCTACCTCACCAAAATACTTT 57.804 37.500 0.02 0.00 41.17 2.66
3302 3486 5.836024 TGGTCTACCTCACCAAAATACTT 57.164 39.130 0.02 0.00 41.17 2.24
3310 3494 2.036733 CGAAACTTGGTCTACCTCACCA 59.963 50.000 0.02 0.00 42.48 4.17
3311 3495 2.036862 ACGAAACTTGGTCTACCTCACC 59.963 50.000 0.02 0.00 36.82 4.02
3312 3496 3.382048 ACGAAACTTGGTCTACCTCAC 57.618 47.619 0.02 0.00 36.82 3.51
3313 3497 4.124238 CAAACGAAACTTGGTCTACCTCA 58.876 43.478 0.02 0.00 36.82 3.86
3314 3498 4.025145 CACAAACGAAACTTGGTCTACCTC 60.025 45.833 0.02 0.00 36.82 3.85
3315 3499 3.875134 CACAAACGAAACTTGGTCTACCT 59.125 43.478 0.02 0.00 36.82 3.08
3316 3500 3.624410 ACACAAACGAAACTTGGTCTACC 59.376 43.478 0.00 0.00 0.00 3.18
3317 3501 4.260497 GGACACAAACGAAACTTGGTCTAC 60.260 45.833 0.00 0.00 30.82 2.59
3318 3502 3.872771 GGACACAAACGAAACTTGGTCTA 59.127 43.478 0.00 0.00 30.82 2.59
3319 3503 2.681344 GGACACAAACGAAACTTGGTCT 59.319 45.455 0.00 0.00 30.82 3.85
3320 3504 2.420722 TGGACACAAACGAAACTTGGTC 59.579 45.455 0.00 0.00 0.00 4.02
3321 3505 2.438411 TGGACACAAACGAAACTTGGT 58.562 42.857 0.00 0.00 0.00 3.67
3322 3506 3.708563 ATGGACACAAACGAAACTTGG 57.291 42.857 0.00 0.00 0.00 3.61
3323 3507 4.616802 GCATATGGACACAAACGAAACTTG 59.383 41.667 4.56 0.00 0.00 3.16
3324 3508 4.277174 TGCATATGGACACAAACGAAACTT 59.723 37.500 4.56 0.00 0.00 2.66
3325 3509 3.818210 TGCATATGGACACAAACGAAACT 59.182 39.130 4.56 0.00 0.00 2.66
3326 3510 4.153958 TGCATATGGACACAAACGAAAC 57.846 40.909 4.56 0.00 0.00 2.78
3327 3511 6.317391 TGATATGCATATGGACACAAACGAAA 59.683 34.615 23.76 0.00 0.00 3.46
3328 3512 5.819901 TGATATGCATATGGACACAAACGAA 59.180 36.000 23.76 0.00 0.00 3.85
3329 3513 5.363939 TGATATGCATATGGACACAAACGA 58.636 37.500 23.76 0.00 0.00 3.85
3330 3514 5.671742 TGATATGCATATGGACACAAACG 57.328 39.130 23.76 0.00 0.00 3.60
3331 3515 7.031226 ACTTGATATGCATATGGACACAAAC 57.969 36.000 23.76 6.62 0.00 2.93
3332 3516 7.445096 CCTACTTGATATGCATATGGACACAAA 59.555 37.037 23.76 6.61 0.00 2.83
3333 3517 6.936335 CCTACTTGATATGCATATGGACACAA 59.064 38.462 23.76 17.87 0.00 3.33
3334 3518 6.269769 TCCTACTTGATATGCATATGGACACA 59.730 38.462 23.76 11.88 0.00 3.72
3335 3519 6.701340 TCCTACTTGATATGCATATGGACAC 58.299 40.000 23.76 9.40 0.00 3.67
3336 3520 6.933514 TCCTACTTGATATGCATATGGACA 57.066 37.500 23.76 12.59 0.00 4.02
3337 3521 6.820656 CCTTCCTACTTGATATGCATATGGAC 59.179 42.308 23.76 10.12 0.00 4.02
3338 3522 6.730507 TCCTTCCTACTTGATATGCATATGGA 59.269 38.462 23.76 18.26 0.00 3.41
3339 3523 6.950842 TCCTTCCTACTTGATATGCATATGG 58.049 40.000 23.76 16.37 0.00 2.74
3340 3524 7.619050 ACTCCTTCCTACTTGATATGCATATG 58.381 38.462 23.76 11.90 0.00 1.78
3341 3525 7.805083 ACTCCTTCCTACTTGATATGCATAT 57.195 36.000 19.17 19.17 0.00 1.78
3342 3526 7.290014 TGAACTCCTTCCTACTTGATATGCATA 59.710 37.037 9.27 9.27 0.00 3.14
3343 3527 6.100279 TGAACTCCTTCCTACTTGATATGCAT 59.900 38.462 3.79 3.79 0.00 3.96
3344 3528 5.425217 TGAACTCCTTCCTACTTGATATGCA 59.575 40.000 0.00 0.00 0.00 3.96
3345 3529 5.755861 GTGAACTCCTTCCTACTTGATATGC 59.244 44.000 0.00 0.00 0.00 3.14
3346 3530 6.098982 AGGTGAACTCCTTCCTACTTGATATG 59.901 42.308 0.00 0.00 33.52 1.78
3347 3531 6.206042 AGGTGAACTCCTTCCTACTTGATAT 58.794 40.000 0.00 0.00 33.52 1.63
3348 3532 5.590818 AGGTGAACTCCTTCCTACTTGATA 58.409 41.667 0.00 0.00 33.52 2.15
3349 3533 4.430441 AGGTGAACTCCTTCCTACTTGAT 58.570 43.478 0.00 0.00 33.52 2.57
3350 3534 3.833070 GAGGTGAACTCCTTCCTACTTGA 59.167 47.826 0.00 0.00 40.49 3.02
3351 3535 3.367498 CGAGGTGAACTCCTTCCTACTTG 60.367 52.174 0.00 0.00 43.57 3.16
3352 3536 2.826725 CGAGGTGAACTCCTTCCTACTT 59.173 50.000 0.00 0.00 43.57 2.24
3353 3537 2.448453 CGAGGTGAACTCCTTCCTACT 58.552 52.381 0.00 0.00 43.57 2.57
3354 3538 1.477295 CCGAGGTGAACTCCTTCCTAC 59.523 57.143 0.00 0.00 43.57 3.18
3355 3539 1.076677 ACCGAGGTGAACTCCTTCCTA 59.923 52.381 0.00 0.00 43.57 2.94
3356 3540 0.178929 ACCGAGGTGAACTCCTTCCT 60.179 55.000 0.00 0.00 43.57 3.36
3357 3541 0.685660 AACCGAGGTGAACTCCTTCC 59.314 55.000 0.00 0.00 43.57 3.46
3358 3542 2.414806 GAAACCGAGGTGAACTCCTTC 58.585 52.381 0.00 0.00 43.57 3.46
3359 3543 1.071857 GGAAACCGAGGTGAACTCCTT 59.928 52.381 0.00 0.00 43.57 3.36
3360 3544 0.685660 GGAAACCGAGGTGAACTCCT 59.314 55.000 0.00 0.00 43.57 3.69
3361 3545 0.395312 TGGAAACCGAGGTGAACTCC 59.605 55.000 0.00 1.21 43.57 3.85
3362 3546 2.474410 ATGGAAACCGAGGTGAACTC 57.526 50.000 0.00 0.00 43.02 3.01
3363 3547 2.504367 CAATGGAAACCGAGGTGAACT 58.496 47.619 0.00 0.00 0.00 3.01
3364 3548 1.068541 GCAATGGAAACCGAGGTGAAC 60.069 52.381 0.00 0.00 0.00 3.18
3365 3549 1.243902 GCAATGGAAACCGAGGTGAA 58.756 50.000 0.00 0.00 0.00 3.18
3366 3550 0.109532 TGCAATGGAAACCGAGGTGA 59.890 50.000 0.00 0.00 0.00 4.02
3367 3551 0.240945 GTGCAATGGAAACCGAGGTG 59.759 55.000 0.00 0.00 0.00 4.00
3368 3552 1.234615 CGTGCAATGGAAACCGAGGT 61.235 55.000 0.00 0.00 0.00 3.85
3369 3553 1.234615 ACGTGCAATGGAAACCGAGG 61.235 55.000 0.00 0.00 0.00 4.63
3370 3554 0.110238 CACGTGCAATGGAAACCGAG 60.110 55.000 0.82 0.00 0.00 4.63
3371 3555 1.511318 CCACGTGCAATGGAAACCGA 61.511 55.000 10.91 0.00 39.87 4.69
3372 3556 1.081509 CCACGTGCAATGGAAACCG 60.082 57.895 10.91 0.00 39.87 4.44
3373 3557 0.039527 GACCACGTGCAATGGAAACC 60.040 55.000 22.12 6.98 39.87 3.27
3374 3558 0.951558 AGACCACGTGCAATGGAAAC 59.048 50.000 22.12 13.29 39.87 2.78
3375 3559 2.422597 CTAGACCACGTGCAATGGAAA 58.577 47.619 22.12 8.05 39.87 3.13
3376 3560 1.943968 GCTAGACCACGTGCAATGGAA 60.944 52.381 22.12 8.34 39.87 3.53
3377 3561 0.391130 GCTAGACCACGTGCAATGGA 60.391 55.000 22.12 2.28 39.87 3.41
3378 3562 0.391661 AGCTAGACCACGTGCAATGG 60.392 55.000 10.91 15.25 43.43 3.16
3379 3563 1.002366 GAGCTAGACCACGTGCAATG 58.998 55.000 10.91 0.00 0.00 2.82
3380 3564 0.898320 AGAGCTAGACCACGTGCAAT 59.102 50.000 10.91 0.00 0.00 3.56
3381 3565 0.679505 AAGAGCTAGACCACGTGCAA 59.320 50.000 10.91 0.00 0.00 4.08
3382 3566 0.038251 CAAGAGCTAGACCACGTGCA 60.038 55.000 10.91 0.00 0.00 4.57
3383 3567 0.038159 ACAAGAGCTAGACCACGTGC 60.038 55.000 10.91 0.00 0.00 5.34
3384 3568 1.269723 TGACAAGAGCTAGACCACGTG 59.730 52.381 9.08 9.08 0.00 4.49
3385 3569 1.617322 TGACAAGAGCTAGACCACGT 58.383 50.000 0.00 0.00 0.00 4.49
3386 3570 2.534298 CATGACAAGAGCTAGACCACG 58.466 52.381 0.00 0.00 0.00 4.94
3387 3571 2.419297 CCCATGACAAGAGCTAGACCAC 60.419 54.545 0.00 0.00 0.00 4.16
3388 3572 1.833630 CCCATGACAAGAGCTAGACCA 59.166 52.381 0.00 0.00 0.00 4.02
3389 3573 1.834263 ACCCATGACAAGAGCTAGACC 59.166 52.381 0.00 0.00 0.00 3.85
3390 3574 2.159028 GGACCCATGACAAGAGCTAGAC 60.159 54.545 0.00 0.00 0.00 2.59
3391 3575 2.111384 GGACCCATGACAAGAGCTAGA 58.889 52.381 0.00 0.00 0.00 2.43
3392 3576 1.833630 TGGACCCATGACAAGAGCTAG 59.166 52.381 0.00 0.00 0.00 3.42
3393 3577 1.555075 GTGGACCCATGACAAGAGCTA 59.445 52.381 0.00 0.00 0.00 3.32
3394 3578 0.326264 GTGGACCCATGACAAGAGCT 59.674 55.000 0.00 0.00 0.00 4.09
3395 3579 1.021390 CGTGGACCCATGACAAGAGC 61.021 60.000 2.09 0.00 35.09 4.09
3396 3580 0.321671 ACGTGGACCCATGACAAGAG 59.678 55.000 14.69 0.00 36.80 2.85
3397 3581 0.034756 CACGTGGACCCATGACAAGA 59.965 55.000 14.69 0.00 36.80 3.02
3398 3582 0.955428 CCACGTGGACCCATGACAAG 60.955 60.000 31.31 0.00 37.39 3.16
3399 3583 1.072332 CCACGTGGACCCATGACAA 59.928 57.895 31.31 0.00 37.39 3.18
3400 3584 2.747022 CCACGTGGACCCATGACA 59.253 61.111 31.31 0.00 37.39 3.58
3401 3585 2.746277 GCCACGTGGACCCATGAC 60.746 66.667 38.30 13.83 37.39 3.06
3402 3586 3.245346 TGCCACGTGGACCCATGA 61.245 61.111 38.30 10.03 37.39 3.07
3403 3587 3.055719 GTGCCACGTGGACCCATG 61.056 66.667 38.30 10.19 37.39 3.66
3404 3588 2.829384 AAGTGCCACGTGGACCCAT 61.829 57.895 38.30 16.04 37.39 4.00
3405 3589 3.484806 AAGTGCCACGTGGACCCA 61.485 61.111 38.30 23.14 37.39 4.51
3406 3590 2.748058 ATCAAGTGCCACGTGGACCC 62.748 60.000 38.30 22.65 37.39 4.46
3407 3591 0.036765 TATCAAGTGCCACGTGGACC 60.037 55.000 38.30 25.19 37.39 4.46
3408 3592 1.665679 CATATCAAGTGCCACGTGGAC 59.334 52.381 38.30 28.80 37.39 4.02
3409 3593 1.277842 ACATATCAAGTGCCACGTGGA 59.722 47.619 38.30 19.89 37.39 4.02
3410 3594 1.737838 ACATATCAAGTGCCACGTGG 58.262 50.000 30.66 30.66 38.53 4.94
3411 3595 2.159531 CCAACATATCAAGTGCCACGTG 60.160 50.000 9.08 9.08 0.00 4.49
3412 3596 2.083774 CCAACATATCAAGTGCCACGT 58.916 47.619 0.00 0.00 0.00 4.49
3413 3597 2.083774 ACCAACATATCAAGTGCCACG 58.916 47.619 0.00 0.00 0.00 4.94
3414 3598 2.819608 ACACCAACATATCAAGTGCCAC 59.180 45.455 0.00 0.00 31.58 5.01
3415 3599 3.153369 ACACCAACATATCAAGTGCCA 57.847 42.857 0.00 0.00 31.58 4.92
3416 3600 4.513442 TCTACACCAACATATCAAGTGCC 58.487 43.478 0.00 0.00 31.58 5.01
3417 3601 5.178797 ACTCTACACCAACATATCAAGTGC 58.821 41.667 0.00 0.00 31.58 4.40
3418 3602 5.812642 GGACTCTACACCAACATATCAAGTG 59.187 44.000 0.00 0.00 34.61 3.16
3419 3603 5.483937 TGGACTCTACACCAACATATCAAGT 59.516 40.000 0.00 0.00 32.93 3.16
3420 3604 5.977635 TGGACTCTACACCAACATATCAAG 58.022 41.667 0.00 0.00 32.93 3.02
3421 3605 6.348498 CATGGACTCTACACCAACATATCAA 58.652 40.000 0.00 0.00 39.69 2.57
3422 3606 5.163311 CCATGGACTCTACACCAACATATCA 60.163 44.000 5.56 0.00 39.69 2.15
3423 3607 5.300752 CCATGGACTCTACACCAACATATC 58.699 45.833 5.56 0.00 39.69 1.63
3424 3608 4.103153 CCCATGGACTCTACACCAACATAT 59.897 45.833 15.22 0.00 39.69 1.78
3425 3609 3.454447 CCCATGGACTCTACACCAACATA 59.546 47.826 15.22 0.00 39.69 2.29
3426 3610 2.239654 CCCATGGACTCTACACCAACAT 59.760 50.000 15.22 0.00 39.69 2.71
3427 3611 1.628340 CCCATGGACTCTACACCAACA 59.372 52.381 15.22 0.00 39.69 3.33
3428 3612 1.065418 CCCCATGGACTCTACACCAAC 60.065 57.143 15.22 0.00 39.69 3.77
3429 3613 1.203376 TCCCCATGGACTCTACACCAA 60.203 52.381 15.22 0.00 39.69 3.67
3430 3614 0.415830 TCCCCATGGACTCTACACCA 59.584 55.000 15.22 0.00 40.57 4.17
3431 3615 1.417890 CATCCCCATGGACTCTACACC 59.582 57.143 15.22 0.00 45.58 4.16
3432 3616 2.398588 TCATCCCCATGGACTCTACAC 58.601 52.381 15.22 0.00 45.58 2.90
3433 3617 2.866923 TCATCCCCATGGACTCTACA 57.133 50.000 15.22 0.00 45.58 2.74
3434 3618 2.304180 CCATCATCCCCATGGACTCTAC 59.696 54.545 15.22 0.00 45.58 2.59
3435 3619 2.182088 TCCATCATCCCCATGGACTCTA 59.818 50.000 15.22 0.00 44.17 2.43
3436 3620 1.061111 TCCATCATCCCCATGGACTCT 60.061 52.381 15.22 0.00 44.17 3.24
3437 3621 1.438469 TCCATCATCCCCATGGACTC 58.562 55.000 15.22 0.00 44.17 3.36
3438 3622 3.681004 TCCATCATCCCCATGGACT 57.319 52.632 15.22 0.00 44.17 3.85
3440 3624 2.211141 TCTTCCATCATCCCCATGGA 57.789 50.000 15.22 0.00 46.81 3.41
3441 3625 2.109480 ACATCTTCCATCATCCCCATGG 59.891 50.000 4.14 4.14 42.16 3.66
3442 3626 3.520691 ACATCTTCCATCATCCCCATG 57.479 47.619 0.00 0.00 0.00 3.66
3443 3627 3.437491 CCAACATCTTCCATCATCCCCAT 60.437 47.826 0.00 0.00 0.00 4.00
3444 3628 2.091720 CCAACATCTTCCATCATCCCCA 60.092 50.000 0.00 0.00 0.00 4.96
3445 3629 2.590821 CCAACATCTTCCATCATCCCC 58.409 52.381 0.00 0.00 0.00 4.81
3446 3630 2.590821 CCCAACATCTTCCATCATCCC 58.409 52.381 0.00 0.00 0.00 3.85
3447 3631 2.175499 TCCCCAACATCTTCCATCATCC 59.825 50.000 0.00 0.00 0.00 3.51
3448 3632 3.582998 TCCCCAACATCTTCCATCATC 57.417 47.619 0.00 0.00 0.00 2.92
3449 3633 3.011595 TGTTCCCCAACATCTTCCATCAT 59.988 43.478 0.00 0.00 37.61 2.45
3450 3634 2.378208 TGTTCCCCAACATCTTCCATCA 59.622 45.455 0.00 0.00 37.61 3.07
3451 3635 3.085952 TGTTCCCCAACATCTTCCATC 57.914 47.619 0.00 0.00 37.61 3.51
3460 3644 7.841282 TTTGAAATTACTATGTTCCCCAACA 57.159 32.000 0.00 0.00 46.71 3.33
3484 3668 1.068816 GCGTGTGCGTAGGGAATTTTT 60.069 47.619 0.00 0.00 40.81 1.94
3485 3669 0.519961 GCGTGTGCGTAGGGAATTTT 59.480 50.000 0.00 0.00 40.81 1.82
3486 3670 2.168054 GCGTGTGCGTAGGGAATTT 58.832 52.632 0.00 0.00 40.81 1.82
3487 3671 3.884900 GCGTGTGCGTAGGGAATT 58.115 55.556 0.00 0.00 40.81 2.17
3493 3677 5.579186 CACATGATCTTGCGTGTGCGTAG 62.579 52.174 8.45 0.00 45.48 3.51
3494 3678 3.802605 CACATGATCTTGCGTGTGCGTA 61.803 50.000 8.45 0.00 45.48 4.42
3495 3679 3.114044 CACATGATCTTGCGTGTGCGT 62.114 52.381 8.45 0.00 45.48 5.24
3496 3680 0.519792 CACATGATCTTGCGTGTGCG 60.520 55.000 8.45 0.00 45.48 5.34
3497 3681 3.301352 CACATGATCTTGCGTGTGC 57.699 52.632 8.45 0.00 45.48 4.57
3499 3683 1.399440 GCATCACATGATCTTGCGTGT 59.601 47.619 8.45 0.00 38.49 4.49
3500 3684 1.399089 TGCATCACATGATCTTGCGTG 59.601 47.619 8.45 6.37 31.21 5.34
3501 3685 1.741528 TGCATCACATGATCTTGCGT 58.258 45.000 8.45 0.00 31.21 5.24
3502 3686 3.667166 GCTATGCATCACATGATCTTGCG 60.667 47.826 0.19 0.00 40.06 4.85
3503 3687 3.252458 TGCTATGCATCACATGATCTTGC 59.748 43.478 0.19 3.75 40.06 4.01
3504 3688 5.212934 GTTGCTATGCATCACATGATCTTG 58.787 41.667 0.19 7.04 40.06 3.02
3505 3689 4.024302 CGTTGCTATGCATCACATGATCTT 60.024 41.667 0.19 0.00 40.06 2.40
3506 3690 3.497262 CGTTGCTATGCATCACATGATCT 59.503 43.478 0.19 0.00 40.06 2.75
3507 3691 3.495753 TCGTTGCTATGCATCACATGATC 59.504 43.478 0.19 0.00 40.06 2.92
3508 3692 3.469739 TCGTTGCTATGCATCACATGAT 58.530 40.909 0.19 0.00 40.06 2.45
3509 3693 2.867975 CTCGTTGCTATGCATCACATGA 59.132 45.455 0.19 3.61 40.06 3.07
3510 3694 2.867975 TCTCGTTGCTATGCATCACATG 59.132 45.455 0.19 0.00 40.06 3.21
3511 3695 3.129109 CTCTCGTTGCTATGCATCACAT 58.871 45.455 0.19 0.00 43.18 3.21
3512 3696 2.543641 CTCTCGTTGCTATGCATCACA 58.456 47.619 0.19 0.00 38.76 3.58
3513 3697 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
3514 3698 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
3515 3699 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
3516 3700 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
3517 3701 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
3518 3702 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
3519 3703 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
3520 3704 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
3521 3705 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
3522 3706 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
3523 3707 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
3524 3708 1.835494 TACACTCTCCCCTCTCGTTG 58.165 55.000 0.00 0.00 0.00 4.10
3525 3709 2.599408 TTACACTCTCCCCTCTCGTT 57.401 50.000 0.00 0.00 0.00 3.85
3526 3710 2.242708 AGATTACACTCTCCCCTCTCGT 59.757 50.000 0.00 0.00 0.00 4.18
3527 3711 2.938838 AGATTACACTCTCCCCTCTCG 58.061 52.381 0.00 0.00 0.00 4.04
3528 3712 4.794334 TGTAGATTACACTCTCCCCTCTC 58.206 47.826 0.00 0.00 32.89 3.20
3529 3713 4.883021 TGTAGATTACACTCTCCCCTCT 57.117 45.455 0.00 0.00 32.89 3.69
3530 3714 5.477637 GGTATGTAGATTACACTCTCCCCTC 59.522 48.000 0.00 0.00 42.23 4.30
3531 3715 5.395611 GGTATGTAGATTACACTCTCCCCT 58.604 45.833 0.00 0.00 42.23 4.79
3532 3716 4.527427 GGGTATGTAGATTACACTCTCCCC 59.473 50.000 0.00 0.00 42.23 4.81
3533 3717 5.395611 AGGGTATGTAGATTACACTCTCCC 58.604 45.833 0.00 0.00 42.23 4.30
3534 3718 6.324254 ACAAGGGTATGTAGATTACACTCTCC 59.676 42.308 0.00 0.00 42.23 3.71
3535 3719 7.349412 ACAAGGGTATGTAGATTACACTCTC 57.651 40.000 0.00 0.00 42.23 3.20
3547 3731 4.142093 GCTTTCGGTCTACAAGGGTATGTA 60.142 45.833 0.00 0.00 34.75 2.29
3548 3732 3.369157 GCTTTCGGTCTACAAGGGTATGT 60.369 47.826 0.00 0.00 37.32 2.29
3549 3733 3.195661 GCTTTCGGTCTACAAGGGTATG 58.804 50.000 0.00 0.00 0.00 2.39
3550 3734 2.159142 CGCTTTCGGTCTACAAGGGTAT 60.159 50.000 0.00 0.00 0.00 2.73
3551 3735 1.203052 CGCTTTCGGTCTACAAGGGTA 59.797 52.381 0.00 0.00 0.00 3.69
3552 3736 0.037605 CGCTTTCGGTCTACAAGGGT 60.038 55.000 0.00 0.00 0.00 4.34
3553 3737 2.750815 CGCTTTCGGTCTACAAGGG 58.249 57.895 0.00 0.00 0.00 3.95
3564 3748 1.065358 TTCTAACGCTTCCGCTTTCG 58.935 50.000 0.00 0.00 38.22 3.46
3565 3749 1.796459 TGTTCTAACGCTTCCGCTTTC 59.204 47.619 0.00 0.00 38.22 2.62
3566 3750 1.873698 TGTTCTAACGCTTCCGCTTT 58.126 45.000 0.00 0.00 38.22 3.51
3567 3751 1.529865 GTTGTTCTAACGCTTCCGCTT 59.470 47.619 0.00 0.00 38.22 4.68
3568 3752 1.145803 GTTGTTCTAACGCTTCCGCT 58.854 50.000 0.00 0.00 38.22 5.52
3569 3753 0.179258 CGTTGTTCTAACGCTTCCGC 60.179 55.000 0.00 0.00 36.82 5.54
3570 3754 3.921081 CGTTGTTCTAACGCTTCCG 57.079 52.632 0.00 0.00 36.82 4.30
3576 3760 0.854062 TCAACCGCGTTGTTCTAACG 59.146 50.000 16.97 7.73 43.23 3.18
3577 3761 2.222445 ACATCAACCGCGTTGTTCTAAC 59.778 45.455 16.97 0.00 43.23 2.34
3578 3762 2.485903 ACATCAACCGCGTTGTTCTAA 58.514 42.857 16.97 2.99 43.23 2.10
3579 3763 2.157834 ACATCAACCGCGTTGTTCTA 57.842 45.000 16.97 2.88 43.23 2.10
3580 3764 2.066262 CTACATCAACCGCGTTGTTCT 58.934 47.619 16.97 4.34 43.23 3.01
3581 3765 1.796459 ACTACATCAACCGCGTTGTTC 59.204 47.619 16.97 0.00 43.23 3.18
3582 3766 1.796459 GACTACATCAACCGCGTTGTT 59.204 47.619 16.97 7.89 43.23 2.83
3583 3767 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
3584 3768 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
3585 3769 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
3586 3770 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
3587 3771 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
3588 3772 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
3589 3773 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
3590 3774 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
3591 3775 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
3592 3776 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
3593 3777 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
3594 3778 3.340552 CGTGAAGACGTACGACTACATC 58.659 50.000 24.41 15.62 42.54 3.06
3595 3779 2.094894 CCGTGAAGACGTACGACTACAT 59.905 50.000 24.41 6.17 44.54 2.29
3596 3780 1.460743 CCGTGAAGACGTACGACTACA 59.539 52.381 24.41 13.28 44.54 2.74
3597 3781 1.788344 GCCGTGAAGACGTACGACTAC 60.788 57.143 24.41 15.53 44.54 2.73
3598 3782 0.443869 GCCGTGAAGACGTACGACTA 59.556 55.000 24.41 3.99 44.54 2.59
3599 3783 1.208614 GCCGTGAAGACGTACGACT 59.791 57.895 24.41 19.11 44.54 4.18
3600 3784 1.799121 GGCCGTGAAGACGTACGAC 60.799 63.158 24.41 16.77 44.54 4.34
3601 3785 2.562912 GGCCGTGAAGACGTACGA 59.437 61.111 24.41 0.00 44.54 3.43
3602 3786 2.505557 GGGCCGTGAAGACGTACG 60.506 66.667 15.01 15.01 44.54 3.67
3603 3787 2.505557 CGGGCCGTGAAGACGTAC 60.506 66.667 19.97 0.00 44.54 3.67
3604 3788 2.672651 TCGGGCCGTGAAGACGTA 60.673 61.111 27.32 0.00 44.54 3.57
3605 3789 4.353437 GTCGGGCCGTGAAGACGT 62.353 66.667 27.32 0.00 44.54 4.34
3615 3799 4.467084 TGCTTGATCGGTCGGGCC 62.467 66.667 9.60 0.00 0.00 5.80
3616 3800 3.195698 GTGCTTGATCGGTCGGGC 61.196 66.667 5.85 5.85 0.00 6.13
3617 3801 2.511600 GGTGCTTGATCGGTCGGG 60.512 66.667 0.00 0.00 0.00 5.14
3618 3802 2.829043 TTCGGTGCTTGATCGGTCGG 62.829 60.000 0.00 0.00 0.00 4.79
3619 3803 1.011968 TTTCGGTGCTTGATCGGTCG 61.012 55.000 0.00 0.00 0.00 4.79
3620 3804 0.442699 GTTTCGGTGCTTGATCGGTC 59.557 55.000 0.00 0.00 0.00 4.79
3621 3805 0.034896 AGTTTCGGTGCTTGATCGGT 59.965 50.000 0.00 0.00 0.00 4.69
3622 3806 1.659098 GTAGTTTCGGTGCTTGATCGG 59.341 52.381 0.00 0.00 0.00 4.18
3623 3807 1.320555 CGTAGTTTCGGTGCTTGATCG 59.679 52.381 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.