Multiple sequence alignment - TraesCS1B01G140800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G140800 chr1B 100.000 7770 0 0 985 8754 187203461 187211230 0.000000e+00 14349.0
1 TraesCS1B01G140800 chr1B 98.821 2291 22 4 3850 6136 69840621 69842910 0.000000e+00 4076.0
2 TraesCS1B01G140800 chr1B 100.000 502 0 0 1 502 187202477 187202978 0.000000e+00 928.0
3 TraesCS1B01G140800 chr1B 78.841 794 106 14 1752 2487 24495826 24496615 6.540000e-131 479.0
4 TraesCS1B01G140800 chr1B 100.000 203 0 0 9111 9313 187211587 187211789 8.830000e-100 375.0
5 TraesCS1B01G140800 chr1B 89.017 173 19 0 2488 2660 363632627 363632799 2.040000e-51 215.0
6 TraesCS1B01G140800 chr1B 85.714 63 9 0 1559 1621 565138781 565138843 6.040000e-07 67.6
7 TraesCS1B01G140800 chr1A 97.031 2627 60 9 6139 8753 134959171 134956551 0.000000e+00 4403.0
8 TraesCS1B01G140800 chr1A 98.734 2291 24 4 3850 6136 517045167 517047456 0.000000e+00 4065.0
9 TraesCS1B01G140800 chr1A 95.619 2374 62 9 985 3319 134963824 134961454 0.000000e+00 3770.0
10 TraesCS1B01G140800 chr1A 96.531 490 10 6 3318 3801 134961308 134960820 0.000000e+00 804.0
11 TraesCS1B01G140800 chr1A 83.152 368 19 22 157 501 134964247 134963900 7.070000e-76 296.0
12 TraesCS1B01G140800 chr1A 87.730 163 20 0 2498 2660 320892731 320892569 3.430000e-44 191.0
13 TraesCS1B01G140800 chr1A 74.897 243 43 10 1752 1979 426839838 426840077 2.770000e-15 95.3
14 TraesCS1B01G140800 chr3B 98.863 2287 24 2 3851 6136 76513940 76511655 0.000000e+00 4078.0
15 TraesCS1B01G140800 chr2B 98.778 2291 23 4 3850 6136 656970053 656972342 0.000000e+00 4071.0
16 TraesCS1B01G140800 chr4B 98.734 2291 24 4 3850 6136 90723727 90726016 0.000000e+00 4065.0
17 TraesCS1B01G140800 chr4B 98.734 2291 24 4 3850 6136 322670145 322672434 0.000000e+00 4065.0
18 TraesCS1B01G140800 chr4B 98.691 2291 26 3 3850 6136 87401050 87403340 0.000000e+00 4061.0
19 TraesCS1B01G140800 chr4B 89.474 57 6 0 3605 3661 472393246 472393190 1.300000e-08 73.1
20 TraesCS1B01G140800 chr2A 98.734 2291 23 5 3850 6136 748456860 748454572 0.000000e+00 4065.0
21 TraesCS1B01G140800 chr2A 97.484 159 2 1 1 157 761188154 761187996 4.290000e-68 270.0
22 TraesCS1B01G140800 chr2A 87.222 180 19 1 2487 2662 155591083 155590904 1.590000e-47 202.0
23 TraesCS1B01G140800 chr2A 95.238 42 2 0 1580 1621 198269797 198269756 6.040000e-07 67.6
24 TraesCS1B01G140800 chr5D 98.438 2304 31 4 3837 6136 565525361 565527663 0.000000e+00 4050.0
25 TraesCS1B01G140800 chr5D 82.496 617 81 18 2663 3268 198489284 198489884 4.990000e-142 516.0
26 TraesCS1B01G140800 chr5D 78.239 795 109 22 1752 2487 198488499 198489288 1.430000e-122 451.0
27 TraesCS1B01G140800 chr5D 78.000 800 106 35 1743 2487 7564839 7565623 1.110000e-118 438.0
28 TraesCS1B01G140800 chr5D 97.484 159 4 0 1 159 360780890 360781048 1.190000e-68 272.0
29 TraesCS1B01G140800 chr5D 95.181 166 8 0 1 166 455877318 455877153 7.170000e-66 263.0
30 TraesCS1B01G140800 chr5D 88.506 174 18 2 2487 2659 13715040 13715212 9.480000e-50 209.0
31 TraesCS1B01G140800 chr5D 84.694 98 15 0 1498 1595 282362991 282362894 2.140000e-16 99.0
32 TraesCS1B01G140800 chr1D 95.391 2365 58 7 985 3319 122840451 122838108 0.000000e+00 3716.0
33 TraesCS1B01G140800 chr1D 97.556 1923 35 9 6802 8718 122836496 122834580 0.000000e+00 3280.0
34 TraesCS1B01G140800 chr1D 96.811 533 16 1 3318 3849 122837962 122837430 0.000000e+00 889.0
35 TraesCS1B01G140800 chr1D 99.209 253 2 0 6135 6387 122837430 122837178 3.070000e-124 457.0
36 TraesCS1B01G140800 chr1D 93.667 300 14 4 6437 6735 122837180 122836885 2.390000e-120 444.0
37 TraesCS1B01G140800 chr1D 87.500 256 16 9 249 488 122841195 122840940 1.980000e-71 281.0
38 TraesCS1B01G140800 chr1D 89.595 173 18 0 2488 2660 250738615 250738443 4.380000e-53 220.0
39 TraesCS1B01G140800 chr1D 96.386 83 3 0 6734 6816 122836803 122836721 4.540000e-28 137.0
40 TraesCS1B01G140800 chr1D 84.615 65 10 0 1557 1621 61165406 61165342 2.170000e-06 65.8
41 TraesCS1B01G140800 chr1D 95.000 40 2 0 8715 8754 122777489 122777450 7.810000e-06 63.9
42 TraesCS1B01G140800 chr5B 82.010 617 83 19 2663 3268 383486794 383486195 5.020000e-137 499.0
43 TraesCS1B01G140800 chr5B 82.068 619 79 19 2663 3268 386366175 386365576 5.020000e-137 499.0
44 TraesCS1B01G140800 chr5B 84.151 530 67 11 2663 3185 483942171 483941652 1.810000e-136 497.0
45 TraesCS1B01G140800 chr5B 77.736 804 113 19 1759 2502 483942949 483942152 5.170000e-117 433.0
46 TraesCS1B01G140800 chr5B 77.488 804 117 18 1759 2502 383487574 383486775 3.110000e-114 424.0
47 TraesCS1B01G140800 chr5B 100.000 156 0 0 3 158 510453038 510453193 1.180000e-73 289.0
48 TraesCS1B01G140800 chr5B 97.452 157 4 0 1 157 303581669 303581825 1.540000e-67 268.0
49 TraesCS1B01G140800 chr5B 87.647 170 20 1 2489 2658 639736651 639736819 7.380000e-46 196.0
50 TraesCS1B01G140800 chr3D 84.030 526 68 10 2663 3182 42511533 42512048 8.400000e-135 492.0
51 TraesCS1B01G140800 chr3D 81.583 619 87 18 2661 3268 32294996 32294394 3.910000e-133 486.0
52 TraesCS1B01G140800 chr6B 83.804 531 68 12 2661 3185 393750818 393750300 1.090000e-133 488.0
53 TraesCS1B01G140800 chr6B 77.640 805 114 25 1759 2502 393751596 393750797 6.680000e-116 429.0
54 TraesCS1B01G140800 chr5A 76.641 792 115 26 1743 2487 5289390 5290158 3.180000e-99 374.0
55 TraesCS1B01G140800 chr5A 85.714 98 14 0 1498 1595 374902356 374902259 4.600000e-18 104.0
56 TraesCS1B01G140800 chr5A 90.000 70 7 0 1538 1607 451487180 451487249 3.580000e-14 91.6
57 TraesCS1B01G140800 chr7D 98.089 157 3 0 1 157 550271294 550271138 3.310000e-69 274.0
58 TraesCS1B01G140800 chr7D 97.468 158 4 0 1 158 505909941 505910098 4.290000e-68 270.0
59 TraesCS1B01G140800 chr7D 95.732 164 7 0 1 164 37279661 37279498 1.990000e-66 265.0
60 TraesCS1B01G140800 chr7D 84.884 172 25 1 2489 2660 102548123 102548293 1.240000e-38 172.0
61 TraesCS1B01G140800 chr7D 97.436 39 1 0 2557 2595 350158868 350158906 6.040000e-07 67.6
62 TraesCS1B01G140800 chr4D 95.808 167 4 2 1 167 92080477 92080640 5.540000e-67 267.0
63 TraesCS1B01G140800 chr4D 79.365 189 20 1 2488 2657 281182333 281182521 2.130000e-21 115.0
64 TraesCS1B01G140800 chr4D 91.228 57 5 0 3605 3661 385740017 385739961 2.790000e-10 78.7
65 TraesCS1B01G140800 chr4D 85.246 61 9 0 1561 1621 351457998 351457938 7.810000e-06 63.9
66 TraesCS1B01G140800 chr2D 84.571 175 27 0 2487 2661 354966787 354966961 3.460000e-39 174.0
67 TraesCS1B01G140800 chr2D 91.743 109 8 1 2543 2650 377304474 377304366 5.830000e-32 150.0
68 TraesCS1B01G140800 chr2D 89.535 86 8 1 3420 3505 386705331 386705247 3.560000e-19 108.0
69 TraesCS1B01G140800 chr2D 89.552 67 7 0 2595 2661 341699043 341698977 1.670000e-12 86.1
70 TraesCS1B01G140800 chr4A 90.909 55 5 0 3607 3661 67175592 67175538 3.610000e-09 75.0
71 TraesCS1B01G140800 chr7B 77.273 132 24 5 3533 3661 64034883 64035011 1.300000e-08 73.1
72 TraesCS1B01G140800 chr7A 76.852 108 19 5 3533 3637 110256206 110256310 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G140800 chr1B 187202477 187211789 9312 False 5217.333333 14349 100.000000 1 9313 3 chr1B.!!$F5 9312
1 TraesCS1B01G140800 chr1B 69840621 69842910 2289 False 4076.000000 4076 98.821000 3850 6136 1 chr1B.!!$F2 2286
2 TraesCS1B01G140800 chr1B 24495826 24496615 789 False 479.000000 479 78.841000 1752 2487 1 chr1B.!!$F1 735
3 TraesCS1B01G140800 chr1A 517045167 517047456 2289 False 4065.000000 4065 98.734000 3850 6136 1 chr1A.!!$F2 2286
4 TraesCS1B01G140800 chr1A 134956551 134964247 7696 True 2318.250000 4403 93.083250 157 8753 4 chr1A.!!$R2 8596
5 TraesCS1B01G140800 chr3B 76511655 76513940 2285 True 4078.000000 4078 98.863000 3851 6136 1 chr3B.!!$R1 2285
6 TraesCS1B01G140800 chr2B 656970053 656972342 2289 False 4071.000000 4071 98.778000 3850 6136 1 chr2B.!!$F1 2286
7 TraesCS1B01G140800 chr4B 90723727 90726016 2289 False 4065.000000 4065 98.734000 3850 6136 1 chr4B.!!$F2 2286
8 TraesCS1B01G140800 chr4B 322670145 322672434 2289 False 4065.000000 4065 98.734000 3850 6136 1 chr4B.!!$F3 2286
9 TraesCS1B01G140800 chr4B 87401050 87403340 2290 False 4061.000000 4061 98.691000 3850 6136 1 chr4B.!!$F1 2286
10 TraesCS1B01G140800 chr2A 748454572 748456860 2288 True 4065.000000 4065 98.734000 3850 6136 1 chr2A.!!$R3 2286
11 TraesCS1B01G140800 chr5D 565525361 565527663 2302 False 4050.000000 4050 98.438000 3837 6136 1 chr5D.!!$F4 2299
12 TraesCS1B01G140800 chr5D 198488499 198489884 1385 False 483.500000 516 80.367500 1752 3268 2 chr5D.!!$F5 1516
13 TraesCS1B01G140800 chr5D 7564839 7565623 784 False 438.000000 438 78.000000 1743 2487 1 chr5D.!!$F1 744
14 TraesCS1B01G140800 chr1D 122834580 122841195 6615 True 1314.857143 3716 95.217143 249 8718 7 chr1D.!!$R4 8469
15 TraesCS1B01G140800 chr5B 386365576 386366175 599 True 499.000000 499 82.068000 2663 3268 1 chr5B.!!$R1 605
16 TraesCS1B01G140800 chr5B 483941652 483942949 1297 True 465.000000 497 80.943500 1759 3185 2 chr5B.!!$R3 1426
17 TraesCS1B01G140800 chr5B 383486195 383487574 1379 True 461.500000 499 79.749000 1759 3268 2 chr5B.!!$R2 1509
18 TraesCS1B01G140800 chr3D 42511533 42512048 515 False 492.000000 492 84.030000 2663 3182 1 chr3D.!!$F1 519
19 TraesCS1B01G140800 chr3D 32294394 32294996 602 True 486.000000 486 81.583000 2661 3268 1 chr3D.!!$R1 607
20 TraesCS1B01G140800 chr6B 393750300 393751596 1296 True 458.500000 488 80.722000 1759 3185 2 chr6B.!!$R1 1426
21 TraesCS1B01G140800 chr5A 5289390 5290158 768 False 374.000000 374 76.641000 1743 2487 1 chr5A.!!$F1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.034059 GGAGAGGGTGTGTGTGTGAG 59.966 60.000 0.00 0.0 0.00 3.51 F
215 216 0.176910 GCTTCTGCCCTGTCTAGTCC 59.823 60.000 0.00 0.0 0.00 3.85 F
222 223 0.324460 CCCTGTCTAGTCCCGGAACT 60.324 60.000 0.73 0.0 0.00 3.01 F
229 230 0.606604 TAGTCCCGGAACTTGTGAGC 59.393 55.000 0.00 0.0 0.00 4.26 F
234 235 0.670546 CCGGAACTTGTGAGCGATGT 60.671 55.000 0.00 0.0 0.00 3.06 F
244 245 0.738975 TGAGCGATGTACTCCCTTCG 59.261 55.000 0.00 0.0 35.72 3.79 F
245 246 0.739561 GAGCGATGTACTCCCTTCGT 59.260 55.000 0.00 0.0 35.25 3.85 F
246 247 0.739561 AGCGATGTACTCCCTTCGTC 59.260 55.000 0.00 0.0 35.25 4.20 F
436 457 1.419922 CCAAATCCGTTCTCGCACG 59.580 57.895 0.00 0.0 40.02 5.34 F
2123 2203 1.887956 GCCACACATCACCATCAACCT 60.888 52.381 0.00 0.0 0.00 3.50 F
3362 3641 0.108585 TTTTCAGGCTGCTCGACCTT 59.891 50.000 10.34 0.0 32.56 3.50 F
3855 5741 0.621082 TCGCCATATCCCCACAACAA 59.379 50.000 0.00 0.0 0.00 2.83 F
4042 5928 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.0 31.93 2.32 F
4106 5992 1.517832 GTCCGCTATGCACTGGAGT 59.482 57.895 0.00 0.0 0.00 3.85 F
4550 6437 2.104170 CTAACCTCCTCCTCCTCACAC 58.896 57.143 0.00 0.0 0.00 3.82 F
6136 8026 2.356382 CACGCCTATCTTCTCTTCTCGT 59.644 50.000 0.00 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1229 1258 1.648191 CGGTGCATGTTTAATTGTGCG 59.352 47.619 0.00 0.0 40.34 5.34 R
2123 2203 1.906574 CTTGGTGAAGGTGCTACCCTA 59.093 52.381 2.18 0.0 39.75 3.53 R
2404 2524 8.099364 CAAGAAGATACTTGACCAAGCTAAAA 57.901 34.615 9.48 0.0 46.85 1.52 R
2502 2626 2.296471 CCGAGATACCGATTAACTGGCT 59.704 50.000 0.00 0.0 0.00 4.75 R
2516 2640 6.929049 CCAGTAGCAATTAATTGACCGAGATA 59.071 38.462 28.33 3.9 40.14 1.98 R
2545 2669 4.929808 CAGTTAAACAGCTATTCGGTGACT 59.070 41.667 0.00 0.0 43.75 3.41 R
2715 2839 1.811965 CAATGCTTCGGACAACATGGA 59.188 47.619 0.00 0.0 0.00 3.41 R
2787 2911 9.503399 TGATCTTCAATCTGAATATCTCATTGG 57.497 33.333 12.96 0.0 39.36 3.16 R
2974 3098 5.393027 GCAAAAACCAAGAGTGAACTCAAGA 60.393 40.000 12.76 0.0 45.21 3.02 R
4216 6102 1.596934 GCCACACGAGGAAGGATCA 59.403 57.895 0.00 0.0 0.00 2.92 R
5788 7678 2.235898 TCGTGGTGGAATGATGATGTCA 59.764 45.455 0.00 0.0 42.06 3.58 R
6094 7984 1.135083 CGTGCCTAGACTGTAAGGTGG 60.135 57.143 9.65 0.0 39.30 4.61 R
6456 8348 0.250597 ACCACCACCTAACCGAAAGC 60.251 55.000 0.00 0.0 0.00 3.51 R
6460 8352 2.041620 AGTAGTACCACCACCTAACCGA 59.958 50.000 0.00 0.0 0.00 4.69 R
6624 8517 2.285083 CCGTTCAGAGTTCAAACACCA 58.715 47.619 0.00 0.0 0.00 4.17 R
8519 10743 0.034337 TCCGCAAACTACACTGGACC 59.966 55.000 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.452114 AGGGAGGGAGAGGGTGTG 59.548 66.667 0.00 0.00 0.00 3.82
18 19 2.122954 GGGAGGGAGAGGGTGTGT 59.877 66.667 0.00 0.00 0.00 3.72
19 20 2.294078 GGGAGGGAGAGGGTGTGTG 61.294 68.421 0.00 0.00 0.00 3.82
20 21 1.536662 GGAGGGAGAGGGTGTGTGT 60.537 63.158 0.00 0.00 0.00 3.72
21 22 1.674057 GAGGGAGAGGGTGTGTGTG 59.326 63.158 0.00 0.00 0.00 3.82
22 23 1.074471 AGGGAGAGGGTGTGTGTGT 60.074 57.895 0.00 0.00 0.00 3.72
23 24 1.071471 GGGAGAGGGTGTGTGTGTG 59.929 63.158 0.00 0.00 0.00 3.82
24 25 1.407656 GGGAGAGGGTGTGTGTGTGA 61.408 60.000 0.00 0.00 0.00 3.58
25 26 0.034059 GGAGAGGGTGTGTGTGTGAG 59.966 60.000 0.00 0.00 0.00 3.51
26 27 1.040646 GAGAGGGTGTGTGTGTGAGA 58.959 55.000 0.00 0.00 0.00 3.27
27 28 1.412710 GAGAGGGTGTGTGTGTGAGAA 59.587 52.381 0.00 0.00 0.00 2.87
28 29 2.037772 GAGAGGGTGTGTGTGTGAGAAT 59.962 50.000 0.00 0.00 0.00 2.40
29 30 2.439507 AGAGGGTGTGTGTGTGAGAATT 59.560 45.455 0.00 0.00 0.00 2.17
30 31 3.117888 AGAGGGTGTGTGTGTGAGAATTT 60.118 43.478 0.00 0.00 0.00 1.82
31 32 2.951642 AGGGTGTGTGTGTGAGAATTTG 59.048 45.455 0.00 0.00 0.00 2.32
32 33 2.948979 GGGTGTGTGTGTGAGAATTTGA 59.051 45.455 0.00 0.00 0.00 2.69
33 34 3.569701 GGGTGTGTGTGTGAGAATTTGAT 59.430 43.478 0.00 0.00 0.00 2.57
34 35 4.539870 GGTGTGTGTGTGAGAATTTGATG 58.460 43.478 0.00 0.00 0.00 3.07
35 36 4.275689 GGTGTGTGTGTGAGAATTTGATGA 59.724 41.667 0.00 0.00 0.00 2.92
36 37 5.048504 GGTGTGTGTGTGAGAATTTGATGAT 60.049 40.000 0.00 0.00 0.00 2.45
37 38 6.149308 GGTGTGTGTGTGAGAATTTGATGATA 59.851 38.462 0.00 0.00 0.00 2.15
38 39 7.308529 GGTGTGTGTGTGAGAATTTGATGATAA 60.309 37.037 0.00 0.00 0.00 1.75
39 40 8.075574 GTGTGTGTGTGAGAATTTGATGATAAA 58.924 33.333 0.00 0.00 0.00 1.40
40 41 8.628280 TGTGTGTGTGAGAATTTGATGATAAAA 58.372 29.630 0.00 0.00 0.00 1.52
41 42 9.462174 GTGTGTGTGAGAATTTGATGATAAAAA 57.538 29.630 0.00 0.00 0.00 1.94
58 59 2.814280 AAAAGGTCGTCGATGTCACT 57.186 45.000 4.21 0.00 0.00 3.41
59 60 2.814280 AAAGGTCGTCGATGTCACTT 57.186 45.000 4.21 5.15 0.00 3.16
60 61 3.928727 AAAGGTCGTCGATGTCACTTA 57.071 42.857 4.21 0.00 0.00 2.24
61 62 3.928727 AAGGTCGTCGATGTCACTTAA 57.071 42.857 4.21 0.00 0.00 1.85
62 63 4.451629 AAGGTCGTCGATGTCACTTAAT 57.548 40.909 4.21 0.00 0.00 1.40
63 64 5.571784 AAGGTCGTCGATGTCACTTAATA 57.428 39.130 4.21 0.00 0.00 0.98
64 65 5.769484 AGGTCGTCGATGTCACTTAATAT 57.231 39.130 4.21 0.00 0.00 1.28
65 66 5.520632 AGGTCGTCGATGTCACTTAATATG 58.479 41.667 4.21 0.00 0.00 1.78
66 67 5.067413 AGGTCGTCGATGTCACTTAATATGT 59.933 40.000 4.21 0.00 0.00 2.29
67 68 6.261603 AGGTCGTCGATGTCACTTAATATGTA 59.738 38.462 4.21 0.00 0.00 2.29
68 69 7.040617 AGGTCGTCGATGTCACTTAATATGTAT 60.041 37.037 4.21 0.00 0.00 2.29
69 70 7.060748 GGTCGTCGATGTCACTTAATATGTATG 59.939 40.741 4.21 0.00 0.00 2.39
70 71 7.801783 GTCGTCGATGTCACTTAATATGTATGA 59.198 37.037 4.21 0.00 0.00 2.15
71 72 8.015658 TCGTCGATGTCACTTAATATGTATGAG 58.984 37.037 4.21 0.00 0.00 2.90
72 73 8.015658 CGTCGATGTCACTTAATATGTATGAGA 58.984 37.037 0.00 0.00 0.00 3.27
73 74 9.678941 GTCGATGTCACTTAATATGTATGAGAA 57.321 33.333 0.00 0.00 0.00 2.87
129 130 5.477607 ACTTTTAAAGTTAATGTGGCCCC 57.522 39.130 4.30 0.00 39.04 5.80
130 131 4.021807 ACTTTTAAAGTTAATGTGGCCCCG 60.022 41.667 4.30 0.00 39.04 5.73
131 132 2.883122 TAAAGTTAATGTGGCCCCGT 57.117 45.000 0.00 0.00 0.00 5.28
132 133 2.003937 AAAGTTAATGTGGCCCCGTT 57.996 45.000 0.00 0.00 0.00 4.44
133 134 1.253100 AAGTTAATGTGGCCCCGTTG 58.747 50.000 0.00 0.00 0.00 4.10
134 135 1.214325 GTTAATGTGGCCCCGTTGC 59.786 57.895 0.00 0.00 0.00 4.17
135 136 1.228583 TTAATGTGGCCCCGTTGCA 60.229 52.632 0.00 0.00 0.00 4.08
136 137 0.827925 TTAATGTGGCCCCGTTGCAA 60.828 50.000 0.00 0.00 0.00 4.08
137 138 1.528292 TAATGTGGCCCCGTTGCAAC 61.528 55.000 19.89 19.89 35.65 4.17
155 156 3.782042 GCACGGGCGTTCTTCTAG 58.218 61.111 0.00 0.00 0.00 2.43
203 204 2.645838 TAGATGAATGGGGCTTCTGC 57.354 50.000 0.00 0.00 38.76 4.26
215 216 0.176910 GCTTCTGCCCTGTCTAGTCC 59.823 60.000 0.00 0.00 0.00 3.85
218 219 2.363795 TGCCCTGTCTAGTCCCGG 60.364 66.667 0.00 0.00 0.00 5.73
221 222 1.957765 GCCCTGTCTAGTCCCGGAAC 61.958 65.000 0.73 0.00 0.00 3.62
222 223 0.324460 CCCTGTCTAGTCCCGGAACT 60.324 60.000 0.73 0.00 0.00 3.01
224 225 1.204941 CCTGTCTAGTCCCGGAACTTG 59.795 57.143 0.00 0.00 0.00 3.16
225 226 1.893801 CTGTCTAGTCCCGGAACTTGT 59.106 52.381 0.00 0.00 0.00 3.16
226 227 1.616865 TGTCTAGTCCCGGAACTTGTG 59.383 52.381 0.00 0.00 0.00 3.33
227 228 1.891150 GTCTAGTCCCGGAACTTGTGA 59.109 52.381 0.00 0.00 0.00 3.58
228 229 2.094649 GTCTAGTCCCGGAACTTGTGAG 60.095 54.545 0.00 0.00 0.00 3.51
229 230 0.606604 TAGTCCCGGAACTTGTGAGC 59.393 55.000 0.00 0.00 0.00 4.26
230 231 2.027625 GTCCCGGAACTTGTGAGCG 61.028 63.158 0.73 0.00 0.00 5.03
231 232 2.204461 TCCCGGAACTTGTGAGCGA 61.204 57.895 0.73 0.00 0.00 4.93
232 233 1.079127 CCCGGAACTTGTGAGCGAT 60.079 57.895 0.73 0.00 0.00 4.58
233 234 1.361668 CCCGGAACTTGTGAGCGATG 61.362 60.000 0.73 0.00 0.00 3.84
234 235 0.670546 CCGGAACTTGTGAGCGATGT 60.671 55.000 0.00 0.00 0.00 3.06
235 236 1.403647 CCGGAACTTGTGAGCGATGTA 60.404 52.381 0.00 0.00 0.00 2.29
236 237 1.654105 CGGAACTTGTGAGCGATGTAC 59.346 52.381 0.00 0.00 0.00 2.90
237 238 2.671351 CGGAACTTGTGAGCGATGTACT 60.671 50.000 0.00 0.00 0.00 2.73
238 239 2.924290 GGAACTTGTGAGCGATGTACTC 59.076 50.000 0.00 0.00 34.62 2.59
239 240 2.656560 ACTTGTGAGCGATGTACTCC 57.343 50.000 0.00 0.00 32.98 3.85
240 241 1.204941 ACTTGTGAGCGATGTACTCCC 59.795 52.381 0.00 0.00 32.98 4.30
241 242 1.478510 CTTGTGAGCGATGTACTCCCT 59.521 52.381 0.00 0.00 32.98 4.20
242 243 1.557099 TGTGAGCGATGTACTCCCTT 58.443 50.000 0.00 0.00 32.98 3.95
243 244 1.476891 TGTGAGCGATGTACTCCCTTC 59.523 52.381 0.00 0.00 32.98 3.46
244 245 0.738975 TGAGCGATGTACTCCCTTCG 59.261 55.000 0.00 0.00 35.72 3.79
245 246 0.739561 GAGCGATGTACTCCCTTCGT 59.260 55.000 0.00 0.00 35.25 3.85
246 247 0.739561 AGCGATGTACTCCCTTCGTC 59.260 55.000 0.00 0.00 35.25 4.20
247 248 0.739561 GCGATGTACTCCCTTCGTCT 59.260 55.000 0.00 0.00 35.25 4.18
371 391 4.066646 ACCACCAAAAATTGTTAGGCAC 57.933 40.909 0.00 0.00 0.00 5.01
378 398 5.634859 CCAAAAATTGTTAGGCACACATCTC 59.365 40.000 0.00 0.00 33.98 2.75
436 457 1.419922 CCAAATCCGTTCTCGCACG 59.580 57.895 0.00 0.00 40.02 5.34
1145 1166 3.004419 GGTTTGGTTTTGCTGGTCTACTC 59.996 47.826 0.00 0.00 0.00 2.59
1220 1249 5.636837 ACGGATAACACAATACATTTGCAC 58.363 37.500 0.00 0.00 0.00 4.57
1221 1250 5.414454 ACGGATAACACAATACATTTGCACT 59.586 36.000 0.00 0.00 0.00 4.40
1223 1252 6.251163 CGGATAACACAATACATTTGCACTTG 59.749 38.462 0.00 0.00 0.00 3.16
1224 1253 7.090173 GGATAACACAATACATTTGCACTTGT 58.910 34.615 6.04 6.04 0.00 3.16
1228 1257 6.674005 CACAATACATTTGCACTTGTGTAC 57.326 37.500 10.27 0.00 40.94 2.90
1229 1258 5.629020 CACAATACATTTGCACTTGTGTACC 59.371 40.000 10.27 0.00 40.94 3.34
1418 1455 4.942944 TGGGAAGTAGAGATGGTTACTCA 58.057 43.478 0.00 0.00 36.91 3.41
1555 1592 2.072298 CTCCTAGCGCTTAATCATGCC 58.928 52.381 18.68 0.00 0.00 4.40
1746 1785 9.638239 TTCAGAACACAAATAAGAAAATATGCC 57.362 29.630 0.00 0.00 0.00 4.40
2123 2203 1.887956 GCCACACATCACCATCAACCT 60.888 52.381 0.00 0.00 0.00 3.50
2502 2626 6.489700 AGTCACACACATTGTTCCAAATATCA 59.510 34.615 0.00 0.00 35.67 2.15
2516 2640 4.821805 CCAAATATCAGCCAGTTAATCGGT 59.178 41.667 0.00 0.00 0.00 4.69
2533 2657 8.985805 GTTAATCGGTATCTCGGTCAATTAATT 58.014 33.333 0.00 0.00 0.00 1.40
2545 2669 4.947388 GGTCAATTAATTGCTACTGGGTGA 59.053 41.667 21.15 0.00 37.68 4.02
2715 2839 8.432805 TCTTCACTTTCAGGAGATCTTTAACTT 58.567 33.333 0.00 0.00 0.00 2.66
2725 2849 6.881602 AGGAGATCTTTAACTTCCATGTTGTC 59.118 38.462 0.00 0.00 0.00 3.18
2787 2911 6.369615 AGCACCTAATTCATCAATTGTTTTGC 59.630 34.615 5.13 2.81 33.95 3.68
2792 2916 8.178964 CCTAATTCATCAATTGTTTTGCCAATG 58.821 33.333 5.13 0.00 35.30 2.82
2974 3098 4.537688 TCAATCTTCTCATCCCCTCTGTTT 59.462 41.667 0.00 0.00 0.00 2.83
3005 3129 5.376625 TCACTCTTGGTTTTTGCATACTCT 58.623 37.500 0.00 0.00 0.00 3.24
3036 3161 6.010850 AGTAAAGGCTCACGGAGATCATATA 58.989 40.000 5.24 0.00 0.00 0.86
3046 3172 5.355630 CACGGAGATCATATAGAGTAGGTGG 59.644 48.000 0.00 0.00 0.00 4.61
3097 3223 2.553904 CCTCAACCATCTGCCTGAACTT 60.554 50.000 0.00 0.00 0.00 2.66
3231 3363 2.910688 ACTTATGCCTCATACACCCG 57.089 50.000 0.00 0.00 0.00 5.28
3233 3365 2.504175 ACTTATGCCTCATACACCCGTT 59.496 45.455 0.00 0.00 0.00 4.44
3312 3444 0.321653 ACTGCCAAATCGGTGTCCTC 60.322 55.000 0.00 0.00 36.97 3.71
3323 3602 1.327690 GGTGTCCTCGTATGGGCTCA 61.328 60.000 0.00 0.00 31.91 4.26
3362 3641 0.108585 TTTTCAGGCTGCTCGACCTT 59.891 50.000 10.34 0.00 32.56 3.50
3855 5741 0.621082 TCGCCATATCCCCACAACAA 59.379 50.000 0.00 0.00 0.00 2.83
4042 5928 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.00 31.93 2.32
4106 5992 1.517832 GTCCGCTATGCACTGGAGT 59.482 57.895 0.00 0.00 0.00 3.85
4216 6102 5.710567 TCTCGTATATCATCATTCCGGACTT 59.289 40.000 1.83 0.00 0.00 3.01
4550 6437 2.104170 CTAACCTCCTCCTCCTCACAC 58.896 57.143 0.00 0.00 0.00 3.82
4597 6484 7.218228 TCATGTACTCGGTTTTAGTTCTACA 57.782 36.000 0.00 0.00 0.00 2.74
5126 7016 3.640967 GCTCAATGACTCTCTCCCATAGT 59.359 47.826 0.00 0.00 0.00 2.12
5431 7321 2.373169 TGCTGGTCTCATCAAAGGAGTT 59.627 45.455 0.00 0.00 34.04 3.01
5432 7322 2.746362 GCTGGTCTCATCAAAGGAGTTG 59.254 50.000 0.00 0.00 38.71 3.16
5434 7324 3.999663 CTGGTCTCATCAAAGGAGTTGTC 59.000 47.826 0.00 0.00 38.47 3.18
5437 7327 4.389374 GTCTCATCAAAGGAGTTGTCCAA 58.611 43.478 0.00 0.00 46.80 3.53
5584 7474 4.408276 CCAATATCCCTCGTCTTCCTCTA 58.592 47.826 0.00 0.00 0.00 2.43
5779 7669 9.512588 TCTGAAGCAATCTTTCTTCTCTTTAAT 57.487 29.630 4.42 0.00 39.41 1.40
5788 7678 7.162082 TCTTTCTTCTCTTTAATCGCCTTCTT 58.838 34.615 0.00 0.00 0.00 2.52
5808 7698 2.631267 TGACATCATCATTCCACCACG 58.369 47.619 0.00 0.00 29.99 4.94
6094 7984 3.640498 GGTATAACACTCTCCCCAGGTAC 59.360 52.174 0.00 0.00 0.00 3.34
6136 8026 2.356382 CACGCCTATCTTCTCTTCTCGT 59.644 50.000 0.00 0.00 0.00 4.18
6137 8027 3.560481 CACGCCTATCTTCTCTTCTCGTA 59.440 47.826 0.00 0.00 0.00 3.43
6386 8278 8.539117 TGATGGATCTCAGATCACTTAAGTTA 57.461 34.615 16.76 0.00 0.00 2.24
6414 8306 5.628797 TGTGAATCTTGATACCATGGCTA 57.371 39.130 13.04 3.98 0.00 3.93
6432 8324 8.033038 CCATGGCTAATGAAAATGAGATAATGG 58.967 37.037 0.00 0.00 38.72 3.16
6485 8377 5.264395 GGTTAGGTGGTGGTACTACTTAGA 58.736 45.833 9.41 0.00 29.70 2.10
6486 8378 5.359292 GGTTAGGTGGTGGTACTACTTAGAG 59.641 48.000 9.41 0.00 29.70 2.43
6487 8379 4.942363 AGGTGGTGGTACTACTTAGAGA 57.058 45.455 9.41 0.00 29.70 3.10
6488 8380 5.469210 AGGTGGTGGTACTACTTAGAGAT 57.531 43.478 9.41 0.00 29.70 2.75
6489 8381 5.202004 AGGTGGTGGTACTACTTAGAGATG 58.798 45.833 9.41 0.00 29.70 2.90
6490 8382 4.341520 GGTGGTGGTACTACTTAGAGATGG 59.658 50.000 9.41 0.00 29.70 3.51
6491 8383 5.198965 GTGGTGGTACTACTTAGAGATGGA 58.801 45.833 9.41 0.00 0.00 3.41
6492 8384 5.299782 GTGGTGGTACTACTTAGAGATGGAG 59.700 48.000 9.41 0.00 0.00 3.86
6575 8468 8.761497 CATCATTTAATAACCTACTGTACCACG 58.239 37.037 0.00 0.00 0.00 4.94
6618 8511 9.841880 CCAATGATATTATCTTTGCATGAAGAG 57.158 33.333 19.53 0.00 40.87 2.85
6624 8517 7.951347 ATTATCTTTGCATGAAGAGGAAGTT 57.049 32.000 6.94 0.00 38.90 2.66
6738 8714 5.748670 TGTTGGGCACAGTAAGATAACTA 57.251 39.130 0.00 0.00 0.00 2.24
7134 9347 9.330063 TCTTATCATTGACCTCACATCAATAAC 57.670 33.333 0.17 0.00 43.39 1.89
7139 9352 5.907866 TGACCTCACATCAATAACGTAGA 57.092 39.130 0.00 0.00 0.00 2.59
7169 9382 7.912250 GTCATCTTAATTCTGTGGCTTTACATG 59.088 37.037 0.00 0.00 0.00 3.21
7199 9412 3.645212 CAGATCACATCATGGACCTAGGT 59.355 47.826 16.26 16.26 0.00 3.08
7526 9739 0.254178 CAACCATGGCTGCTCTACCT 59.746 55.000 13.04 0.00 0.00 3.08
7583 9796 2.571212 TGTAGTTTTCCCAGTGCACTG 58.429 47.619 35.15 35.15 43.40 3.66
7634 9854 4.184079 ACGTGCTATTCTCGTTAAACCT 57.816 40.909 0.00 0.00 41.48 3.50
7865 10085 2.280628 GAGGTTGCAGTTATTAGCGCT 58.719 47.619 17.26 17.26 0.00 5.92
8189 10409 2.034878 CCTGCTGATAGGCTGTCAGTA 58.965 52.381 32.83 29.22 43.86 2.74
8192 10412 1.270041 GCTGATAGGCTGTCAGTAGGC 60.270 57.143 32.83 20.87 43.86 3.93
8215 10435 6.127619 GGCATTTATCTTTGTAAGCCAGAGTT 60.128 38.462 0.00 0.00 40.50 3.01
8309 10529 4.120755 GGGGAGCCTGGAGCCTTG 62.121 72.222 0.00 0.00 45.47 3.61
8329 10549 7.123247 AGCCTTGTAGTTTGATTGCTTAATCAT 59.877 33.333 3.81 0.00 38.79 2.45
8472 10692 2.997986 TGATTAGTCTTTTCGCGGGAAC 59.002 45.455 15.20 4.07 0.00 3.62
8519 10743 2.285977 GCCTTAACACCTTACCCGATG 58.714 52.381 0.00 0.00 0.00 3.84
8670 10895 4.464008 AGGTGTGAATTTTCTTCAGCTCA 58.536 39.130 11.70 0.00 36.61 4.26
8675 10900 5.009010 TGTGAATTTTCTTCAGCTCAAGGAC 59.991 40.000 0.00 0.00 0.00 3.85
8709 10934 5.172687 TCACCAGCAGTTTATACAATGGA 57.827 39.130 7.95 0.00 31.54 3.41
8753 10978 3.328535 TGCTCAGATGTATGAGGGGTA 57.671 47.619 6.76 0.00 45.66 3.69
9136 11361 6.757897 TGCTTACTTTGTATTGGATCTTGG 57.242 37.500 0.00 0.00 0.00 3.61
9137 11362 5.125417 TGCTTACTTTGTATTGGATCTTGGC 59.875 40.000 0.00 0.00 0.00 4.52
9138 11363 5.358160 GCTTACTTTGTATTGGATCTTGGCT 59.642 40.000 0.00 0.00 0.00 4.75
9139 11364 6.127619 GCTTACTTTGTATTGGATCTTGGCTT 60.128 38.462 0.00 0.00 0.00 4.35
9140 11365 7.067008 GCTTACTTTGTATTGGATCTTGGCTTA 59.933 37.037 0.00 0.00 0.00 3.09
9141 11366 8.506168 TTACTTTGTATTGGATCTTGGCTTAG 57.494 34.615 0.00 0.00 0.00 2.18
9142 11367 6.485171 ACTTTGTATTGGATCTTGGCTTAGT 58.515 36.000 0.00 0.00 0.00 2.24
9143 11368 6.375455 ACTTTGTATTGGATCTTGGCTTAGTG 59.625 38.462 0.00 0.00 0.00 2.74
9144 11369 4.780815 TGTATTGGATCTTGGCTTAGTGG 58.219 43.478 0.00 0.00 0.00 4.00
9145 11370 4.473196 TGTATTGGATCTTGGCTTAGTGGA 59.527 41.667 0.00 0.00 0.00 4.02
9146 11371 3.634397 TTGGATCTTGGCTTAGTGGAG 57.366 47.619 0.00 0.00 0.00 3.86
9147 11372 1.839994 TGGATCTTGGCTTAGTGGAGG 59.160 52.381 0.00 0.00 0.00 4.30
9148 11373 1.475930 GGATCTTGGCTTAGTGGAGGC 60.476 57.143 0.00 0.00 42.15 4.70
9149 11374 0.548510 ATCTTGGCTTAGTGGAGGCC 59.451 55.000 0.00 0.00 45.45 5.19
9150 11375 0.547712 TCTTGGCTTAGTGGAGGCCT 60.548 55.000 3.86 3.86 45.45 5.19
9151 11376 0.329596 CTTGGCTTAGTGGAGGCCTT 59.670 55.000 6.77 0.00 45.45 4.35
9152 11377 0.777446 TTGGCTTAGTGGAGGCCTTT 59.223 50.000 6.77 0.00 45.45 3.11
9153 11378 0.777446 TGGCTTAGTGGAGGCCTTTT 59.223 50.000 6.77 0.00 45.45 2.27
9154 11379 1.271926 TGGCTTAGTGGAGGCCTTTTC 60.272 52.381 6.77 0.00 45.45 2.29
9155 11380 1.004862 GGCTTAGTGGAGGCCTTTTCT 59.995 52.381 6.77 8.24 42.31 2.52
9156 11381 2.555448 GGCTTAGTGGAGGCCTTTTCTT 60.555 50.000 6.77 0.00 42.31 2.52
9157 11382 2.750166 GCTTAGTGGAGGCCTTTTCTTC 59.250 50.000 6.77 0.00 0.00 2.87
9158 11383 3.560239 GCTTAGTGGAGGCCTTTTCTTCT 60.560 47.826 6.77 2.94 0.00 2.85
9159 11384 4.657013 CTTAGTGGAGGCCTTTTCTTCTT 58.343 43.478 6.77 0.00 0.00 2.52
9160 11385 3.147553 AGTGGAGGCCTTTTCTTCTTC 57.852 47.619 6.77 0.00 0.00 2.87
9161 11386 2.713708 AGTGGAGGCCTTTTCTTCTTCT 59.286 45.455 6.77 0.00 0.00 2.85
9162 11387 3.078097 GTGGAGGCCTTTTCTTCTTCTC 58.922 50.000 6.77 0.00 0.00 2.87
9163 11388 2.982488 TGGAGGCCTTTTCTTCTTCTCT 59.018 45.455 6.77 0.00 0.00 3.10
9164 11389 3.008485 TGGAGGCCTTTTCTTCTTCTCTC 59.992 47.826 6.77 0.00 0.00 3.20
9165 11390 3.605634 GAGGCCTTTTCTTCTTCTCTCC 58.394 50.000 6.77 0.00 0.00 3.71
9166 11391 2.027653 AGGCCTTTTCTTCTTCTCTCCG 60.028 50.000 0.00 0.00 0.00 4.63
9167 11392 2.289756 GGCCTTTTCTTCTTCTCTCCGT 60.290 50.000 0.00 0.00 0.00 4.69
9168 11393 2.997303 GCCTTTTCTTCTTCTCTCCGTC 59.003 50.000 0.00 0.00 0.00 4.79
9169 11394 3.246619 CCTTTTCTTCTTCTCTCCGTCG 58.753 50.000 0.00 0.00 0.00 5.12
9170 11395 3.246619 CTTTTCTTCTTCTCTCCGTCGG 58.753 50.000 4.39 4.39 0.00 4.79
9171 11396 2.195741 TTCTTCTTCTCTCCGTCGGA 57.804 50.000 14.54 14.54 0.00 4.55
9172 11397 2.195741 TCTTCTTCTCTCCGTCGGAA 57.804 50.000 16.23 5.76 0.00 4.30
9173 11398 2.085320 TCTTCTTCTCTCCGTCGGAAG 58.915 52.381 16.23 14.84 38.13 3.46
9174 11399 0.526662 TTCTTCTCTCCGTCGGAAGC 59.473 55.000 16.23 0.00 37.11 3.86
9175 11400 0.322636 TCTTCTCTCCGTCGGAAGCT 60.323 55.000 16.23 0.00 37.11 3.74
9176 11401 0.099791 CTTCTCTCCGTCGGAAGCTC 59.900 60.000 16.23 0.00 31.73 4.09
9177 11402 0.322636 TTCTCTCCGTCGGAAGCTCT 60.323 55.000 16.23 0.00 0.00 4.09
9178 11403 1.027255 TCTCTCCGTCGGAAGCTCTG 61.027 60.000 16.23 2.32 0.00 3.35
9179 11404 1.002502 TCTCCGTCGGAAGCTCTGA 60.003 57.895 16.23 4.95 0.00 3.27
9180 11405 1.137825 CTCCGTCGGAAGCTCTGAC 59.862 63.158 16.23 12.51 46.58 3.51
9183 11408 4.968197 GTCGGAAGCTCTGACGTT 57.032 55.556 8.69 0.00 42.21 3.99
9184 11409 2.435741 GTCGGAAGCTCTGACGTTG 58.564 57.895 8.69 0.00 42.21 4.10
9185 11410 1.009389 GTCGGAAGCTCTGACGTTGG 61.009 60.000 8.69 0.00 42.21 3.77
9186 11411 1.176619 TCGGAAGCTCTGACGTTGGA 61.177 55.000 0.00 0.00 0.00 3.53
9187 11412 0.734253 CGGAAGCTCTGACGTTGGAG 60.734 60.000 12.43 12.43 0.00 3.86
9188 11413 0.390472 GGAAGCTCTGACGTTGGAGG 60.390 60.000 16.59 3.62 0.00 4.30
9189 11414 0.318762 GAAGCTCTGACGTTGGAGGT 59.681 55.000 14.60 14.60 41.26 3.85
9190 11415 0.034059 AAGCTCTGACGTTGGAGGTG 59.966 55.000 18.95 3.32 39.73 4.00
9191 11416 1.115930 AGCTCTGACGTTGGAGGTGT 61.116 55.000 18.00 0.00 38.61 4.16
9192 11417 0.249911 GCTCTGACGTTGGAGGTGTT 60.250 55.000 16.59 0.00 0.00 3.32
9193 11418 1.810412 GCTCTGACGTTGGAGGTGTTT 60.810 52.381 16.59 0.00 0.00 2.83
9194 11419 1.867233 CTCTGACGTTGGAGGTGTTTG 59.133 52.381 9.83 0.00 0.00 2.93
9195 11420 1.483004 TCTGACGTTGGAGGTGTTTGA 59.517 47.619 0.00 0.00 0.00 2.69
9196 11421 2.093394 TCTGACGTTGGAGGTGTTTGAA 60.093 45.455 0.00 0.00 0.00 2.69
9197 11422 2.285083 TGACGTTGGAGGTGTTTGAAG 58.715 47.619 0.00 0.00 0.00 3.02
9198 11423 2.093394 TGACGTTGGAGGTGTTTGAAGA 60.093 45.455 0.00 0.00 0.00 2.87
9199 11424 3.139077 GACGTTGGAGGTGTTTGAAGAT 58.861 45.455 0.00 0.00 0.00 2.40
9200 11425 3.551846 ACGTTGGAGGTGTTTGAAGATT 58.448 40.909 0.00 0.00 0.00 2.40
9201 11426 3.951680 ACGTTGGAGGTGTTTGAAGATTT 59.048 39.130 0.00 0.00 0.00 2.17
9202 11427 4.401202 ACGTTGGAGGTGTTTGAAGATTTT 59.599 37.500 0.00 0.00 0.00 1.82
9203 11428 4.739716 CGTTGGAGGTGTTTGAAGATTTTG 59.260 41.667 0.00 0.00 0.00 2.44
9204 11429 4.935352 TGGAGGTGTTTGAAGATTTTGG 57.065 40.909 0.00 0.00 0.00 3.28
9205 11430 4.285863 TGGAGGTGTTTGAAGATTTTGGT 58.714 39.130 0.00 0.00 0.00 3.67
9206 11431 4.340950 TGGAGGTGTTTGAAGATTTTGGTC 59.659 41.667 0.00 0.00 0.00 4.02
9207 11432 4.340950 GGAGGTGTTTGAAGATTTTGGTCA 59.659 41.667 0.00 0.00 0.00 4.02
9208 11433 5.011023 GGAGGTGTTTGAAGATTTTGGTCAT 59.989 40.000 0.00 0.00 0.00 3.06
9209 11434 6.462909 GGAGGTGTTTGAAGATTTTGGTCATT 60.463 38.462 0.00 0.00 0.00 2.57
9210 11435 6.282930 AGGTGTTTGAAGATTTTGGTCATTG 58.717 36.000 0.00 0.00 0.00 2.82
9211 11436 6.048509 GGTGTTTGAAGATTTTGGTCATTGT 58.951 36.000 0.00 0.00 0.00 2.71
9212 11437 6.018832 GGTGTTTGAAGATTTTGGTCATTGTG 60.019 38.462 0.00 0.00 0.00 3.33
9213 11438 6.534793 GTGTTTGAAGATTTTGGTCATTGTGT 59.465 34.615 0.00 0.00 0.00 3.72
9214 11439 7.064490 GTGTTTGAAGATTTTGGTCATTGTGTT 59.936 33.333 0.00 0.00 0.00 3.32
9215 11440 7.605691 TGTTTGAAGATTTTGGTCATTGTGTTT 59.394 29.630 0.00 0.00 0.00 2.83
9216 11441 7.769272 TTGAAGATTTTGGTCATTGTGTTTC 57.231 32.000 0.00 0.00 0.00 2.78
9217 11442 7.111247 TGAAGATTTTGGTCATTGTGTTTCT 57.889 32.000 0.00 0.00 0.00 2.52
9218 11443 7.555087 TGAAGATTTTGGTCATTGTGTTTCTT 58.445 30.769 0.00 0.00 0.00 2.52
9219 11444 8.040132 TGAAGATTTTGGTCATTGTGTTTCTTT 58.960 29.630 0.00 0.00 0.00 2.52
9220 11445 8.791327 AAGATTTTGGTCATTGTGTTTCTTTT 57.209 26.923 0.00 0.00 0.00 2.27
9221 11446 9.883142 AAGATTTTGGTCATTGTGTTTCTTTTA 57.117 25.926 0.00 0.00 0.00 1.52
9222 11447 9.533253 AGATTTTGGTCATTGTGTTTCTTTTAG 57.467 29.630 0.00 0.00 0.00 1.85
9223 11448 8.661352 ATTTTGGTCATTGTGTTTCTTTTAGG 57.339 30.769 0.00 0.00 0.00 2.69
9224 11449 5.782893 TGGTCATTGTGTTTCTTTTAGGG 57.217 39.130 0.00 0.00 0.00 3.53
9225 11450 5.205056 TGGTCATTGTGTTTCTTTTAGGGT 58.795 37.500 0.00 0.00 0.00 4.34
9226 11451 5.068460 TGGTCATTGTGTTTCTTTTAGGGTG 59.932 40.000 0.00 0.00 0.00 4.61
9227 11452 5.300792 GGTCATTGTGTTTCTTTTAGGGTGA 59.699 40.000 0.00 0.00 0.00 4.02
9228 11453 6.015434 GGTCATTGTGTTTCTTTTAGGGTGAT 60.015 38.462 0.00 0.00 0.00 3.06
9229 11454 7.433680 GTCATTGTGTTTCTTTTAGGGTGATT 58.566 34.615 0.00 0.00 0.00 2.57
9230 11455 7.926018 GTCATTGTGTTTCTTTTAGGGTGATTT 59.074 33.333 0.00 0.00 0.00 2.17
9231 11456 8.482128 TCATTGTGTTTCTTTTAGGGTGATTTT 58.518 29.630 0.00 0.00 0.00 1.82
9232 11457 8.550376 CATTGTGTTTCTTTTAGGGTGATTTTG 58.450 33.333 0.00 0.00 0.00 2.44
9233 11458 6.578023 TGTGTTTCTTTTAGGGTGATTTTGG 58.422 36.000 0.00 0.00 0.00 3.28
9234 11459 6.155393 TGTGTTTCTTTTAGGGTGATTTTGGT 59.845 34.615 0.00 0.00 0.00 3.67
9235 11460 6.700081 GTGTTTCTTTTAGGGTGATTTTGGTC 59.300 38.462 0.00 0.00 0.00 4.02
9236 11461 6.381420 TGTTTCTTTTAGGGTGATTTTGGTCA 59.619 34.615 0.00 0.00 0.00 4.02
9237 11462 7.070571 TGTTTCTTTTAGGGTGATTTTGGTCAT 59.929 33.333 0.00 0.00 0.00 3.06
9238 11463 7.610580 TTCTTTTAGGGTGATTTTGGTCATT 57.389 32.000 0.00 0.00 0.00 2.57
9239 11464 6.991938 TCTTTTAGGGTGATTTTGGTCATTG 58.008 36.000 0.00 0.00 0.00 2.82
9240 11465 6.553100 TCTTTTAGGGTGATTTTGGTCATTGT 59.447 34.615 0.00 0.00 0.00 2.71
9241 11466 5.720371 TTAGGGTGATTTTGGTCATTGTG 57.280 39.130 0.00 0.00 0.00 3.33
9242 11467 3.575805 AGGGTGATTTTGGTCATTGTGT 58.424 40.909 0.00 0.00 0.00 3.72
9243 11468 3.966665 AGGGTGATTTTGGTCATTGTGTT 59.033 39.130 0.00 0.00 0.00 3.32
9244 11469 4.057432 GGGTGATTTTGGTCATTGTGTTG 58.943 43.478 0.00 0.00 0.00 3.33
9245 11470 4.057432 GGTGATTTTGGTCATTGTGTTGG 58.943 43.478 0.00 0.00 0.00 3.77
9246 11471 4.442753 GGTGATTTTGGTCATTGTGTTGGT 60.443 41.667 0.00 0.00 0.00 3.67
9247 11472 4.507388 GTGATTTTGGTCATTGTGTTGGTG 59.493 41.667 0.00 0.00 0.00 4.17
9248 11473 3.533606 TTTTGGTCATTGTGTTGGTGG 57.466 42.857 0.00 0.00 0.00 4.61
9249 11474 2.151502 TTGGTCATTGTGTTGGTGGT 57.848 45.000 0.00 0.00 0.00 4.16
9250 11475 2.151502 TGGTCATTGTGTTGGTGGTT 57.848 45.000 0.00 0.00 0.00 3.67
9251 11476 1.753649 TGGTCATTGTGTTGGTGGTTG 59.246 47.619 0.00 0.00 0.00 3.77
9252 11477 1.537990 GGTCATTGTGTTGGTGGTTGC 60.538 52.381 0.00 0.00 0.00 4.17
9253 11478 1.135915 GTCATTGTGTTGGTGGTTGCA 59.864 47.619 0.00 0.00 0.00 4.08
9254 11479 1.408340 TCATTGTGTTGGTGGTTGCAG 59.592 47.619 0.00 0.00 0.00 4.41
9255 11480 0.752054 ATTGTGTTGGTGGTTGCAGG 59.248 50.000 0.00 0.00 0.00 4.85
9256 11481 1.326213 TTGTGTTGGTGGTTGCAGGG 61.326 55.000 0.00 0.00 0.00 4.45
9257 11482 1.454847 GTGTTGGTGGTTGCAGGGA 60.455 57.895 0.00 0.00 0.00 4.20
9258 11483 1.454847 TGTTGGTGGTTGCAGGGAC 60.455 57.895 0.00 0.00 0.00 4.46
9259 11484 2.203280 TTGGTGGTTGCAGGGACG 60.203 61.111 0.00 0.00 0.00 4.79
9260 11485 2.747443 TTGGTGGTTGCAGGGACGA 61.747 57.895 0.00 0.00 0.00 4.20
9261 11486 2.112297 GGTGGTTGCAGGGACGAA 59.888 61.111 0.00 0.00 0.00 3.85
9262 11487 1.966451 GGTGGTTGCAGGGACGAAG 60.966 63.158 0.00 0.00 0.00 3.79
9263 11488 1.070786 GTGGTTGCAGGGACGAAGA 59.929 57.895 0.00 0.00 0.00 2.87
9264 11489 0.534203 GTGGTTGCAGGGACGAAGAA 60.534 55.000 0.00 0.00 0.00 2.52
9265 11490 0.250295 TGGTTGCAGGGACGAAGAAG 60.250 55.000 0.00 0.00 0.00 2.85
9266 11491 0.955919 GGTTGCAGGGACGAAGAAGG 60.956 60.000 0.00 0.00 0.00 3.46
9267 11492 0.034896 GTTGCAGGGACGAAGAAGGA 59.965 55.000 0.00 0.00 0.00 3.36
9268 11493 0.984230 TTGCAGGGACGAAGAAGGAT 59.016 50.000 0.00 0.00 0.00 3.24
9269 11494 0.984230 TGCAGGGACGAAGAAGGATT 59.016 50.000 0.00 0.00 0.00 3.01
9270 11495 1.351017 TGCAGGGACGAAGAAGGATTT 59.649 47.619 0.00 0.00 0.00 2.17
9271 11496 2.224769 TGCAGGGACGAAGAAGGATTTT 60.225 45.455 0.00 0.00 0.00 1.82
9272 11497 2.420372 GCAGGGACGAAGAAGGATTTTC 59.580 50.000 0.00 0.00 0.00 2.29
9273 11498 3.870299 GCAGGGACGAAGAAGGATTTTCT 60.870 47.826 0.00 0.00 0.00 2.52
9274 11499 3.686726 CAGGGACGAAGAAGGATTTTCTG 59.313 47.826 0.00 0.00 0.00 3.02
9275 11500 3.328050 AGGGACGAAGAAGGATTTTCTGT 59.672 43.478 0.00 0.00 0.00 3.41
9276 11501 3.437049 GGGACGAAGAAGGATTTTCTGTG 59.563 47.826 0.00 0.00 0.00 3.66
9277 11502 4.315803 GGACGAAGAAGGATTTTCTGTGA 58.684 43.478 0.00 0.00 0.00 3.58
9278 11503 4.755123 GGACGAAGAAGGATTTTCTGTGAA 59.245 41.667 0.00 0.00 0.00 3.18
9279 11504 5.106908 GGACGAAGAAGGATTTTCTGTGAAG 60.107 44.000 0.00 0.00 0.00 3.02
9280 11505 5.368989 ACGAAGAAGGATTTTCTGTGAAGT 58.631 37.500 0.00 0.00 0.00 3.01
9281 11506 5.237344 ACGAAGAAGGATTTTCTGTGAAGTG 59.763 40.000 0.00 0.00 0.00 3.16
9282 11507 5.466728 CGAAGAAGGATTTTCTGTGAAGTGA 59.533 40.000 0.00 0.00 0.00 3.41
9283 11508 6.564873 CGAAGAAGGATTTTCTGTGAAGTGAC 60.565 42.308 0.00 0.00 0.00 3.67
9284 11509 4.752101 AGAAGGATTTTCTGTGAAGTGACG 59.248 41.667 0.00 0.00 0.00 4.35
9285 11510 4.336889 AGGATTTTCTGTGAAGTGACGA 57.663 40.909 0.00 0.00 0.00 4.20
9286 11511 4.310769 AGGATTTTCTGTGAAGTGACGAG 58.689 43.478 0.00 0.00 0.00 4.18
9287 11512 4.058817 GGATTTTCTGTGAAGTGACGAGT 58.941 43.478 0.00 0.00 0.00 4.18
9288 11513 4.150804 GGATTTTCTGTGAAGTGACGAGTC 59.849 45.833 0.00 0.00 0.00 3.36
9289 11514 2.401017 TTCTGTGAAGTGACGAGTCG 57.599 50.000 11.85 11.85 0.00 4.18
9290 11515 0.591659 TCTGTGAAGTGACGAGTCGG 59.408 55.000 18.30 0.00 0.00 4.79
9291 11516 0.311165 CTGTGAAGTGACGAGTCGGT 59.689 55.000 18.30 2.14 0.00 4.69
9292 11517 0.030235 TGTGAAGTGACGAGTCGGTG 59.970 55.000 18.30 0.00 0.00 4.94
9293 11518 0.030369 GTGAAGTGACGAGTCGGTGT 59.970 55.000 18.30 0.00 0.00 4.16
9294 11519 0.309922 TGAAGTGACGAGTCGGTGTC 59.690 55.000 18.30 6.08 35.67 3.67
9295 11520 0.592148 GAAGTGACGAGTCGGTGTCT 59.408 55.000 18.30 6.72 36.10 3.41
9296 11521 0.311165 AAGTGACGAGTCGGTGTCTG 59.689 55.000 18.30 0.00 36.10 3.51
9297 11522 0.534427 AGTGACGAGTCGGTGTCTGA 60.534 55.000 18.30 0.00 36.10 3.27
9298 11523 0.522180 GTGACGAGTCGGTGTCTGAT 59.478 55.000 18.30 0.00 36.10 2.90
9299 11524 1.068472 GTGACGAGTCGGTGTCTGATT 60.068 52.381 18.30 0.00 36.10 2.57
9300 11525 1.611977 TGACGAGTCGGTGTCTGATTT 59.388 47.619 18.30 0.00 36.10 2.17
9301 11526 2.815503 TGACGAGTCGGTGTCTGATTTA 59.184 45.455 18.30 0.00 36.10 1.40
9302 11527 3.119955 TGACGAGTCGGTGTCTGATTTAG 60.120 47.826 18.30 0.00 36.10 1.85
9303 11528 2.163815 ACGAGTCGGTGTCTGATTTAGG 59.836 50.000 18.30 0.00 0.00 2.69
9304 11529 2.422479 CGAGTCGGTGTCTGATTTAGGA 59.578 50.000 4.10 0.00 0.00 2.94
9305 11530 3.066900 CGAGTCGGTGTCTGATTTAGGAT 59.933 47.826 4.10 0.00 0.00 3.24
9306 11531 4.612943 GAGTCGGTGTCTGATTTAGGATC 58.387 47.826 0.00 0.00 0.00 3.36
9307 11532 3.385111 AGTCGGTGTCTGATTTAGGATCC 59.615 47.826 2.48 2.48 0.00 3.36
9308 11533 2.361119 TCGGTGTCTGATTTAGGATCCG 59.639 50.000 5.98 0.00 35.21 4.18
9309 11534 2.100916 CGGTGTCTGATTTAGGATCCGT 59.899 50.000 5.98 0.00 32.18 4.69
9310 11535 3.718815 GGTGTCTGATTTAGGATCCGTC 58.281 50.000 5.98 4.43 0.00 4.79
9311 11536 3.385111 GGTGTCTGATTTAGGATCCGTCT 59.615 47.826 5.98 0.00 0.00 4.18
9312 11537 4.141914 GGTGTCTGATTTAGGATCCGTCTT 60.142 45.833 5.98 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.122954 ACACACCCTCTCCCTCCC 59.877 66.667 0.00 0.00 0.00 4.30
3 4 1.122019 ACACACACACCCTCTCCCTC 61.122 60.000 0.00 0.00 0.00 4.30
4 5 1.074471 ACACACACACCCTCTCCCT 60.074 57.895 0.00 0.00 0.00 4.20
5 6 1.071471 CACACACACACCCTCTCCC 59.929 63.158 0.00 0.00 0.00 4.30
6 7 0.034059 CTCACACACACACCCTCTCC 59.966 60.000 0.00 0.00 0.00 3.71
7 8 1.040646 TCTCACACACACACCCTCTC 58.959 55.000 0.00 0.00 0.00 3.20
8 9 1.496060 TTCTCACACACACACCCTCT 58.504 50.000 0.00 0.00 0.00 3.69
12 13 4.275689 TCATCAAATTCTCACACACACACC 59.724 41.667 0.00 0.00 0.00 4.16
13 14 5.422666 TCATCAAATTCTCACACACACAC 57.577 39.130 0.00 0.00 0.00 3.82
14 15 7.742556 TTATCATCAAATTCTCACACACACA 57.257 32.000 0.00 0.00 0.00 3.72
15 16 9.462174 TTTTTATCATCAAATTCTCACACACAC 57.538 29.630 0.00 0.00 0.00 3.82
38 39 3.107642 AGTGACATCGACGACCTTTTT 57.892 42.857 0.00 0.00 0.00 1.94
39 40 2.814280 AGTGACATCGACGACCTTTT 57.186 45.000 0.00 0.00 0.00 2.27
40 41 2.814280 AAGTGACATCGACGACCTTT 57.186 45.000 0.00 0.00 0.00 3.11
41 42 3.928727 TTAAGTGACATCGACGACCTT 57.071 42.857 0.00 0.56 0.00 3.50
42 43 5.067413 ACATATTAAGTGACATCGACGACCT 59.933 40.000 0.00 0.00 0.00 3.85
43 44 5.279384 ACATATTAAGTGACATCGACGACC 58.721 41.667 0.00 0.00 0.00 4.79
44 45 7.801783 TCATACATATTAAGTGACATCGACGAC 59.198 37.037 0.00 0.00 0.00 4.34
45 46 7.867752 TCATACATATTAAGTGACATCGACGA 58.132 34.615 0.00 0.00 0.00 4.20
46 47 8.015658 TCTCATACATATTAAGTGACATCGACG 58.984 37.037 0.00 0.00 0.00 5.12
47 48 9.678941 TTCTCATACATATTAAGTGACATCGAC 57.321 33.333 0.00 0.00 0.00 4.20
107 108 4.021807 CGGGGCCACATTAACTTTAAAAGT 60.022 41.667 5.46 0.00 45.46 2.66
108 109 4.021807 ACGGGGCCACATTAACTTTAAAAG 60.022 41.667 5.46 0.00 0.00 2.27
109 110 3.896272 ACGGGGCCACATTAACTTTAAAA 59.104 39.130 5.46 0.00 0.00 1.52
110 111 3.498334 ACGGGGCCACATTAACTTTAAA 58.502 40.909 5.46 0.00 0.00 1.52
111 112 3.157750 ACGGGGCCACATTAACTTTAA 57.842 42.857 5.46 0.00 0.00 1.52
112 113 2.820787 CAACGGGGCCACATTAACTTTA 59.179 45.455 5.46 0.00 0.00 1.85
113 114 1.616374 CAACGGGGCCACATTAACTTT 59.384 47.619 5.46 0.00 0.00 2.66
114 115 1.253100 CAACGGGGCCACATTAACTT 58.747 50.000 5.46 0.00 0.00 2.66
115 116 1.248101 GCAACGGGGCCACATTAACT 61.248 55.000 5.46 0.00 0.00 2.24
116 117 1.214325 GCAACGGGGCCACATTAAC 59.786 57.895 5.46 0.00 0.00 2.01
117 118 0.827925 TTGCAACGGGGCCACATTAA 60.828 50.000 5.46 0.00 0.00 1.40
118 119 1.228583 TTGCAACGGGGCCACATTA 60.229 52.632 5.46 0.00 0.00 1.90
119 120 2.522923 TTGCAACGGGGCCACATT 60.523 55.556 5.46 0.00 0.00 2.71
120 121 3.302344 GTTGCAACGGGGCCACAT 61.302 61.111 14.90 0.00 30.39 3.21
138 139 0.171903 TACTAGAAGAACGCCCGTGC 59.828 55.000 0.00 0.00 0.00 5.34
139 140 1.471684 ACTACTAGAAGAACGCCCGTG 59.528 52.381 0.00 0.00 0.00 4.94
140 141 1.831580 ACTACTAGAAGAACGCCCGT 58.168 50.000 0.00 0.00 0.00 5.28
141 142 2.935481 AACTACTAGAAGAACGCCCG 57.065 50.000 0.00 0.00 0.00 6.13
142 143 5.658468 ACAATAACTACTAGAAGAACGCCC 58.342 41.667 0.00 0.00 0.00 6.13
143 144 8.868635 ATTACAATAACTACTAGAAGAACGCC 57.131 34.615 0.00 0.00 0.00 5.68
185 186 3.509517 GCAGAAGCCCCATTCATCT 57.490 52.632 0.00 0.00 33.58 2.90
203 204 0.324460 AGTTCCGGGACTAGACAGGG 60.324 60.000 15.83 0.00 0.00 4.45
215 216 0.670546 ACATCGCTCACAAGTTCCGG 60.671 55.000 0.00 0.00 0.00 5.14
218 219 2.924290 GGAGTACATCGCTCACAAGTTC 59.076 50.000 0.00 0.00 34.83 3.01
221 222 1.927895 GGGAGTACATCGCTCACAAG 58.072 55.000 0.00 0.00 36.46 3.16
228 229 0.739561 AGACGAAGGGAGTACATCGC 59.260 55.000 0.00 0.00 38.80 4.58
229 230 2.014857 TGAGACGAAGGGAGTACATCG 58.985 52.381 0.00 0.00 40.90 3.84
230 231 5.067413 TGTTATGAGACGAAGGGAGTACATC 59.933 44.000 0.00 0.00 0.00 3.06
231 232 4.954202 TGTTATGAGACGAAGGGAGTACAT 59.046 41.667 0.00 0.00 0.00 2.29
232 233 4.338012 TGTTATGAGACGAAGGGAGTACA 58.662 43.478 0.00 0.00 0.00 2.90
233 234 4.978083 TGTTATGAGACGAAGGGAGTAC 57.022 45.455 0.00 0.00 0.00 2.73
234 235 6.540438 AAATGTTATGAGACGAAGGGAGTA 57.460 37.500 0.00 0.00 0.00 2.59
235 236 5.422214 AAATGTTATGAGACGAAGGGAGT 57.578 39.130 0.00 0.00 0.00 3.85
236 237 6.371548 TGAAAAATGTTATGAGACGAAGGGAG 59.628 38.462 0.00 0.00 0.00 4.30
237 238 6.234920 TGAAAAATGTTATGAGACGAAGGGA 58.765 36.000 0.00 0.00 0.00 4.20
238 239 6.494893 TGAAAAATGTTATGAGACGAAGGG 57.505 37.500 0.00 0.00 0.00 3.95
239 240 9.490663 GTATTGAAAAATGTTATGAGACGAAGG 57.509 33.333 0.00 0.00 0.00 3.46
297 298 8.623903 GGCATCATCATCACTAACTTAATTGAA 58.376 33.333 0.00 0.00 0.00 2.69
298 299 7.994911 AGGCATCATCATCACTAACTTAATTGA 59.005 33.333 0.00 0.00 0.00 2.57
299 300 8.162878 AGGCATCATCATCACTAACTTAATTG 57.837 34.615 0.00 0.00 0.00 2.32
300 301 8.757982 AAGGCATCATCATCACTAACTTAATT 57.242 30.769 0.00 0.00 0.00 1.40
302 303 6.767902 GGAAGGCATCATCATCACTAACTTAA 59.232 38.462 0.00 0.00 0.00 1.85
304 305 5.128919 GGAAGGCATCATCATCACTAACTT 58.871 41.667 0.00 0.00 0.00 2.66
305 306 4.445448 GGGAAGGCATCATCATCACTAACT 60.445 45.833 0.00 0.00 0.00 2.24
308 309 3.321039 AGGGAAGGCATCATCATCACTA 58.679 45.455 0.00 0.00 0.00 2.74
309 310 2.106166 GAGGGAAGGCATCATCATCACT 59.894 50.000 0.00 0.00 0.00 3.41
310 311 2.158711 TGAGGGAAGGCATCATCATCAC 60.159 50.000 0.00 0.00 0.00 3.06
312 313 2.945080 TGAGGGAAGGCATCATCATC 57.055 50.000 0.00 0.00 0.00 2.92
313 314 2.158505 CCTTGAGGGAAGGCATCATCAT 60.159 50.000 0.00 0.00 45.17 2.45
315 316 1.978454 CCTTGAGGGAAGGCATCATC 58.022 55.000 0.00 0.00 45.17 2.92
371 391 2.007049 GCCCCACAAGTACGAGATGTG 61.007 57.143 13.64 13.64 43.10 3.21
1145 1166 3.057315 AGAGATTTGCATGAACAAACGGG 60.057 43.478 0.00 0.00 42.01 5.28
1224 1253 3.253432 TGCATGTTTAATTGTGCGGTACA 59.747 39.130 0.00 0.00 40.34 2.90
1225 1254 3.606346 GTGCATGTTTAATTGTGCGGTAC 59.394 43.478 0.00 0.00 40.34 3.34
1226 1255 3.366476 GGTGCATGTTTAATTGTGCGGTA 60.366 43.478 0.00 0.00 40.34 4.02
1227 1256 2.609244 GGTGCATGTTTAATTGTGCGGT 60.609 45.455 0.00 0.00 40.34 5.68
1228 1257 1.991965 GGTGCATGTTTAATTGTGCGG 59.008 47.619 0.00 0.00 40.34 5.69
1229 1258 1.648191 CGGTGCATGTTTAATTGTGCG 59.352 47.619 0.00 0.00 40.34 5.34
1353 1390 8.732531 CATTTGTGGAAAGGCATTCAAATAAAT 58.267 29.630 4.72 5.76 39.98 1.40
1367 1404 7.358600 CGTGTTCATTTCATCATTTGTGGAAAG 60.359 37.037 0.00 0.00 33.28 2.62
1418 1455 9.975218 ATTGGAAAAGTACCAGTAATGACTAAT 57.025 29.630 0.00 0.00 38.70 1.73
1527 1564 2.943449 AAGCGCTAGGAGTACTGTTC 57.057 50.000 12.05 0.00 0.00 3.18
1555 1592 3.490759 CGCCTAAGCACACGCCTG 61.491 66.667 0.00 0.00 39.83 4.85
1894 1947 5.167121 CAAAAATGGATTGTGCGGAATGTA 58.833 37.500 0.00 0.00 0.00 2.29
2123 2203 1.906574 CTTGGTGAAGGTGCTACCCTA 59.093 52.381 2.18 0.00 39.75 3.53
2404 2524 8.099364 CAAGAAGATACTTGACCAAGCTAAAA 57.901 34.615 9.48 0.00 46.85 1.52
2502 2626 2.296471 CCGAGATACCGATTAACTGGCT 59.704 50.000 0.00 0.00 0.00 4.75
2516 2640 6.929049 CCAGTAGCAATTAATTGACCGAGATA 59.071 38.462 28.33 3.90 40.14 1.98
2545 2669 4.929808 CAGTTAAACAGCTATTCGGTGACT 59.070 41.667 0.00 0.00 43.75 3.41
2715 2839 1.811965 CAATGCTTCGGACAACATGGA 59.188 47.619 0.00 0.00 0.00 3.41
2787 2911 9.503399 TGATCTTCAATCTGAATATCTCATTGG 57.497 33.333 12.96 0.00 39.36 3.16
2974 3098 5.393027 GCAAAAACCAAGAGTGAACTCAAGA 60.393 40.000 12.76 0.00 45.21 3.02
3036 3161 3.370104 CTGGTCTTGATCCACCTACTCT 58.630 50.000 7.03 0.00 33.36 3.24
3046 3172 2.149973 ATTTGGCCCTGGTCTTGATC 57.850 50.000 0.00 0.00 0.00 2.92
3097 3223 3.220940 TCCAATGCAACTGACAATGACA 58.779 40.909 0.00 0.00 0.00 3.58
3231 3363 4.549458 AGCACATCACTACATTGCAAAAC 58.451 39.130 1.71 0.00 35.57 2.43
3233 3365 3.120234 CGAGCACATCACTACATTGCAAA 60.120 43.478 1.71 0.00 35.57 3.68
3323 3602 4.772886 AAATTAGGGTTCGTATCAGGCT 57.227 40.909 0.00 0.00 0.00 4.58
3648 3933 3.199071 ACATCACTTAATTGGCTACCGGA 59.801 43.478 9.46 0.00 0.00 5.14
3855 5741 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
4106 5992 3.640407 AGCGCAGGCCTCCAGAAA 61.640 61.111 11.47 0.00 41.24 2.52
4216 6102 1.596934 GCCACACGAGGAAGGATCA 59.403 57.895 0.00 0.00 0.00 2.92
4550 6437 3.192001 TGTGCGGTTTCAGTACTACTAGG 59.808 47.826 0.00 0.00 0.00 3.02
4597 6484 3.762288 GGAATCGAAAGGGTTTAGGCTTT 59.238 43.478 0.00 0.00 0.00 3.51
5126 7016 4.906065 GCTGATGAGCCATACAATGAAA 57.094 40.909 0.00 0.00 39.57 2.69
5431 7321 6.126863 AGAGTTCTACCATTGAATTGGACA 57.873 37.500 0.00 0.00 39.25 4.02
5432 7322 6.173339 TGAGAGTTCTACCATTGAATTGGAC 58.827 40.000 0.00 0.00 39.25 4.02
5434 7324 7.555554 AGAATGAGAGTTCTACCATTGAATTGG 59.444 37.037 0.00 0.00 36.71 3.16
5437 7327 7.278875 GGAGAATGAGAGTTCTACCATTGAAT 58.721 38.462 0.00 0.00 38.51 2.57
5584 7474 5.580998 TCTATAAGATGGCTAAGATCCGGT 58.419 41.667 0.00 0.00 0.00 5.28
5779 7669 3.548745 ATGATGATGTCAAGAAGGCGA 57.451 42.857 0.00 0.00 40.97 5.54
5788 7678 2.235898 TCGTGGTGGAATGATGATGTCA 59.764 45.455 0.00 0.00 42.06 3.58
5808 7698 5.336134 GGAGAAGCGAAGATAAGGATACCTC 60.336 48.000 0.00 0.00 30.89 3.85
5941 7831 2.637872 CAGGTGTTCAAGGAGAGGGTAA 59.362 50.000 0.00 0.00 0.00 2.85
6076 7966 1.433985 TGGTACCTGGGGAGAGTGTTA 59.566 52.381 14.36 0.00 0.00 2.41
6094 7984 1.135083 CGTGCCTAGACTGTAAGGTGG 60.135 57.143 9.65 0.00 39.30 4.61
6386 8278 7.470981 GCCATGGTATCAAGATTCACATTCAAT 60.471 37.037 14.67 0.00 0.00 2.57
6432 8324 6.183359 GCATGATGTCATCACGTTGTAAAAAC 60.183 38.462 17.74 0.00 43.01 2.43
6456 8348 0.250597 ACCACCACCTAACCGAAAGC 60.251 55.000 0.00 0.00 0.00 3.51
6460 8352 2.041620 AGTAGTACCACCACCTAACCGA 59.958 50.000 0.00 0.00 0.00 4.69
6461 8353 2.450476 AGTAGTACCACCACCTAACCG 58.550 52.381 0.00 0.00 0.00 4.44
6569 8462 4.693566 GTGATTGGACAATTCTTCGTGGTA 59.306 41.667 0.00 0.00 0.00 3.25
6575 8468 6.271488 TCATTGGTGATTGGACAATTCTTC 57.729 37.500 0.00 0.00 32.89 2.87
6618 8511 3.945285 TCAGAGTTCAAACACCAACTTCC 59.055 43.478 0.00 0.00 32.83 3.46
6624 8517 2.285083 CCGTTCAGAGTTCAAACACCA 58.715 47.619 0.00 0.00 0.00 4.17
6692 8585 5.531287 AGAACATGGGTTACAAACTTCACTC 59.469 40.000 0.00 0.00 37.36 3.51
6810 8786 6.132658 TCACTTCTGGCTGATCTATAAGACT 58.867 40.000 0.00 0.00 0.00 3.24
7134 9347 9.186323 CCACAGAATTAAGATGACTTATCTACG 57.814 37.037 0.00 0.00 45.41 3.51
7139 9352 8.814038 AAAGCCACAGAATTAAGATGACTTAT 57.186 30.769 0.00 0.00 38.23 1.73
7169 9382 2.034104 TGATGTGATCTGCAGGAAGC 57.966 50.000 15.13 0.00 45.96 3.86
7199 9412 8.704849 TGGTTTTAAAGGAATTCTGATCTTCA 57.295 30.769 5.23 0.00 0.00 3.02
7634 9854 4.946772 TGCAAATGGTCGAAGAATGGAATA 59.053 37.500 0.00 0.00 39.69 1.75
7707 9927 6.880529 TCATCATTTAAGTCAGCATCTGTCAA 59.119 34.615 0.00 0.00 32.61 3.18
8189 10409 5.509498 TCTGGCTTACAAAGATAAATGCCT 58.491 37.500 0.00 0.00 39.77 4.75
8192 10412 8.514594 TCAAACTCTGGCTTACAAAGATAAATG 58.485 33.333 0.00 0.00 0.00 2.32
8459 10679 3.930848 ACTAATAGTGTTCCCGCGAAAAG 59.069 43.478 8.23 0.00 0.00 2.27
8519 10743 0.034337 TCCGCAAACTACACTGGACC 59.966 55.000 0.00 0.00 0.00 4.46
8617 10842 6.909550 ACAAACCACACATAACATACCATT 57.090 33.333 0.00 0.00 0.00 3.16
8620 10845 7.381139 CAGAAAACAAACCACACATAACATACC 59.619 37.037 0.00 0.00 0.00 2.73
8670 10895 2.484889 GTGAAGCGAAAGACAGTCCTT 58.515 47.619 0.00 0.00 0.00 3.36
8675 10900 0.514691 GCTGGTGAAGCGAAAGACAG 59.485 55.000 0.00 0.00 43.45 3.51
9110 11335 8.253113 CCAAGATCCAATACAAAGTAAGCAAAT 58.747 33.333 0.00 0.00 0.00 2.32
9111 11336 7.601856 CCAAGATCCAATACAAAGTAAGCAAA 58.398 34.615 0.00 0.00 0.00 3.68
9112 11337 6.350110 GCCAAGATCCAATACAAAGTAAGCAA 60.350 38.462 0.00 0.00 0.00 3.91
9113 11338 5.125417 GCCAAGATCCAATACAAAGTAAGCA 59.875 40.000 0.00 0.00 0.00 3.91
9114 11339 5.358160 AGCCAAGATCCAATACAAAGTAAGC 59.642 40.000 0.00 0.00 0.00 3.09
9115 11340 7.396540 AAGCCAAGATCCAATACAAAGTAAG 57.603 36.000 0.00 0.00 0.00 2.34
9116 11341 8.107095 ACTAAGCCAAGATCCAATACAAAGTAA 58.893 33.333 0.00 0.00 0.00 2.24
9117 11342 7.552687 CACTAAGCCAAGATCCAATACAAAGTA 59.447 37.037 0.00 0.00 0.00 2.24
9118 11343 6.375455 CACTAAGCCAAGATCCAATACAAAGT 59.625 38.462 0.00 0.00 0.00 2.66
9119 11344 6.183360 CCACTAAGCCAAGATCCAATACAAAG 60.183 42.308 0.00 0.00 0.00 2.77
9120 11345 5.652014 CCACTAAGCCAAGATCCAATACAAA 59.348 40.000 0.00 0.00 0.00 2.83
9121 11346 5.045213 TCCACTAAGCCAAGATCCAATACAA 60.045 40.000 0.00 0.00 0.00 2.41
9122 11347 4.473196 TCCACTAAGCCAAGATCCAATACA 59.527 41.667 0.00 0.00 0.00 2.29
9123 11348 5.036117 TCCACTAAGCCAAGATCCAATAC 57.964 43.478 0.00 0.00 0.00 1.89
9124 11349 4.103153 CCTCCACTAAGCCAAGATCCAATA 59.897 45.833 0.00 0.00 0.00 1.90
9125 11350 3.117738 CCTCCACTAAGCCAAGATCCAAT 60.118 47.826 0.00 0.00 0.00 3.16
9126 11351 2.239654 CCTCCACTAAGCCAAGATCCAA 59.760 50.000 0.00 0.00 0.00 3.53
9127 11352 1.839994 CCTCCACTAAGCCAAGATCCA 59.160 52.381 0.00 0.00 0.00 3.41
9128 11353 1.475930 GCCTCCACTAAGCCAAGATCC 60.476 57.143 0.00 0.00 0.00 3.36
9129 11354 1.475930 GGCCTCCACTAAGCCAAGATC 60.476 57.143 0.00 0.00 46.34 2.75
9130 11355 0.548510 GGCCTCCACTAAGCCAAGAT 59.451 55.000 0.00 0.00 46.34 2.40
9131 11356 1.991230 GGCCTCCACTAAGCCAAGA 59.009 57.895 0.00 0.00 46.34 3.02
9132 11357 4.645809 GGCCTCCACTAAGCCAAG 57.354 61.111 0.00 0.00 46.34 3.61
9136 11361 2.498644 AGAAAAGGCCTCCACTAAGC 57.501 50.000 5.23 0.00 0.00 3.09
9137 11362 4.293662 AGAAGAAAAGGCCTCCACTAAG 57.706 45.455 5.23 0.00 0.00 2.18
9138 11363 4.351111 AGAAGAAGAAAAGGCCTCCACTAA 59.649 41.667 5.23 0.00 0.00 2.24
9139 11364 3.910627 AGAAGAAGAAAAGGCCTCCACTA 59.089 43.478 5.23 0.00 0.00 2.74
9140 11365 2.713708 AGAAGAAGAAAAGGCCTCCACT 59.286 45.455 5.23 2.25 0.00 4.00
9141 11366 3.078097 GAGAAGAAGAAAAGGCCTCCAC 58.922 50.000 5.23 0.00 0.00 4.02
9142 11367 2.982488 AGAGAAGAAGAAAAGGCCTCCA 59.018 45.455 5.23 0.00 0.00 3.86
9143 11368 3.605634 GAGAGAAGAAGAAAAGGCCTCC 58.394 50.000 5.23 0.00 0.00 4.30
9144 11369 3.605634 GGAGAGAAGAAGAAAAGGCCTC 58.394 50.000 5.23 0.00 0.00 4.70
9145 11370 2.027653 CGGAGAGAAGAAGAAAAGGCCT 60.028 50.000 0.00 0.00 0.00 5.19
9146 11371 2.289756 ACGGAGAGAAGAAGAAAAGGCC 60.290 50.000 0.00 0.00 0.00 5.19
9147 11372 2.997303 GACGGAGAGAAGAAGAAAAGGC 59.003 50.000 0.00 0.00 0.00 4.35
9148 11373 3.246619 CGACGGAGAGAAGAAGAAAAGG 58.753 50.000 0.00 0.00 0.00 3.11
9149 11374 3.057456 TCCGACGGAGAGAAGAAGAAAAG 60.057 47.826 13.88 0.00 0.00 2.27
9150 11375 2.889045 TCCGACGGAGAGAAGAAGAAAA 59.111 45.455 13.88 0.00 0.00 2.29
9151 11376 2.511659 TCCGACGGAGAGAAGAAGAAA 58.488 47.619 13.88 0.00 0.00 2.52
9152 11377 2.195741 TCCGACGGAGAGAAGAAGAA 57.804 50.000 13.88 0.00 0.00 2.52
9153 11378 2.085320 CTTCCGACGGAGAGAAGAAGA 58.915 52.381 17.51 0.00 39.50 2.87
9154 11379 1.468395 GCTTCCGACGGAGAGAAGAAG 60.468 57.143 17.51 10.74 39.50 2.85
9155 11380 0.526662 GCTTCCGACGGAGAGAAGAA 59.473 55.000 17.51 0.00 39.50 2.52
9156 11381 0.322636 AGCTTCCGACGGAGAGAAGA 60.323 55.000 17.51 0.00 39.50 2.87
9157 11382 0.099791 GAGCTTCCGACGGAGAGAAG 59.900 60.000 17.51 12.61 39.99 2.85
9158 11383 0.322636 AGAGCTTCCGACGGAGAGAA 60.323 55.000 17.51 0.72 31.21 2.87
9159 11384 1.027255 CAGAGCTTCCGACGGAGAGA 61.027 60.000 17.51 1.13 31.21 3.10
9160 11385 1.027255 TCAGAGCTTCCGACGGAGAG 61.027 60.000 17.51 17.12 31.21 3.20
9161 11386 1.002502 TCAGAGCTTCCGACGGAGA 60.003 57.895 17.51 6.93 31.21 3.71
9162 11387 1.137825 GTCAGAGCTTCCGACGGAG 59.862 63.158 17.51 12.26 31.21 4.63
9163 11388 2.687805 CGTCAGAGCTTCCGACGGA 61.688 63.158 13.88 13.88 46.59 4.69
9164 11389 2.202492 CGTCAGAGCTTCCGACGG 60.202 66.667 19.78 7.84 46.59 4.79
9166 11391 1.009389 CCAACGTCAGAGCTTCCGAC 61.009 60.000 0.00 0.00 0.00 4.79
9167 11392 1.176619 TCCAACGTCAGAGCTTCCGA 61.177 55.000 0.00 0.00 0.00 4.55
9168 11393 0.734253 CTCCAACGTCAGAGCTTCCG 60.734 60.000 2.22 0.00 0.00 4.30
9169 11394 0.390472 CCTCCAACGTCAGAGCTTCC 60.390 60.000 8.85 0.00 0.00 3.46
9170 11395 0.318762 ACCTCCAACGTCAGAGCTTC 59.681 55.000 8.85 0.00 0.00 3.86
9171 11396 0.034059 CACCTCCAACGTCAGAGCTT 59.966 55.000 8.85 0.00 0.00 3.74
9172 11397 1.115930 ACACCTCCAACGTCAGAGCT 61.116 55.000 8.85 0.00 0.00 4.09
9173 11398 0.249911 AACACCTCCAACGTCAGAGC 60.250 55.000 8.85 0.00 0.00 4.09
9174 11399 1.867233 CAAACACCTCCAACGTCAGAG 59.133 52.381 7.62 7.62 0.00 3.35
9175 11400 1.483004 TCAAACACCTCCAACGTCAGA 59.517 47.619 0.00 0.00 0.00 3.27
9176 11401 1.948104 TCAAACACCTCCAACGTCAG 58.052 50.000 0.00 0.00 0.00 3.51
9177 11402 2.093394 TCTTCAAACACCTCCAACGTCA 60.093 45.455 0.00 0.00 0.00 4.35
9178 11403 2.557317 TCTTCAAACACCTCCAACGTC 58.443 47.619 0.00 0.00 0.00 4.34
9179 11404 2.702592 TCTTCAAACACCTCCAACGT 57.297 45.000 0.00 0.00 0.00 3.99
9180 11405 4.568152 AAATCTTCAAACACCTCCAACG 57.432 40.909 0.00 0.00 0.00 4.10
9181 11406 5.049828 CCAAAATCTTCAAACACCTCCAAC 58.950 41.667 0.00 0.00 0.00 3.77
9182 11407 4.714308 ACCAAAATCTTCAAACACCTCCAA 59.286 37.500 0.00 0.00 0.00 3.53
9183 11408 4.285863 ACCAAAATCTTCAAACACCTCCA 58.714 39.130 0.00 0.00 0.00 3.86
9184 11409 4.340950 TGACCAAAATCTTCAAACACCTCC 59.659 41.667 0.00 0.00 0.00 4.30
9185 11410 5.514274 TGACCAAAATCTTCAAACACCTC 57.486 39.130 0.00 0.00 0.00 3.85
9186 11411 6.127083 ACAATGACCAAAATCTTCAAACACCT 60.127 34.615 0.00 0.00 0.00 4.00
9187 11412 6.018832 CACAATGACCAAAATCTTCAAACACC 60.019 38.462 0.00 0.00 0.00 4.16
9188 11413 6.534793 ACACAATGACCAAAATCTTCAAACAC 59.465 34.615 0.00 0.00 0.00 3.32
9189 11414 6.638610 ACACAATGACCAAAATCTTCAAACA 58.361 32.000 0.00 0.00 0.00 2.83
9190 11415 7.538303 AACACAATGACCAAAATCTTCAAAC 57.462 32.000 0.00 0.00 0.00 2.93
9191 11416 8.040132 AGAAACACAATGACCAAAATCTTCAAA 58.960 29.630 0.00 0.00 0.00 2.69
9192 11417 7.555087 AGAAACACAATGACCAAAATCTTCAA 58.445 30.769 0.00 0.00 0.00 2.69
9193 11418 7.111247 AGAAACACAATGACCAAAATCTTCA 57.889 32.000 0.00 0.00 0.00 3.02
9194 11419 8.424274 AAAGAAACACAATGACCAAAATCTTC 57.576 30.769 0.00 0.00 0.00 2.87
9195 11420 8.791327 AAAAGAAACACAATGACCAAAATCTT 57.209 26.923 0.00 0.00 0.00 2.40
9196 11421 9.533253 CTAAAAGAAACACAATGACCAAAATCT 57.467 29.630 0.00 0.00 0.00 2.40
9197 11422 8.764287 CCTAAAAGAAACACAATGACCAAAATC 58.236 33.333 0.00 0.00 0.00 2.17
9198 11423 7.714813 CCCTAAAAGAAACACAATGACCAAAAT 59.285 33.333 0.00 0.00 0.00 1.82
9199 11424 7.044798 CCCTAAAAGAAACACAATGACCAAAA 58.955 34.615 0.00 0.00 0.00 2.44
9200 11425 6.155393 ACCCTAAAAGAAACACAATGACCAAA 59.845 34.615 0.00 0.00 0.00 3.28
9201 11426 5.659079 ACCCTAAAAGAAACACAATGACCAA 59.341 36.000 0.00 0.00 0.00 3.67
9202 11427 5.068460 CACCCTAAAAGAAACACAATGACCA 59.932 40.000 0.00 0.00 0.00 4.02
9203 11428 5.300792 TCACCCTAAAAGAAACACAATGACC 59.699 40.000 0.00 0.00 0.00 4.02
9204 11429 6.385649 TCACCCTAAAAGAAACACAATGAC 57.614 37.500 0.00 0.00 0.00 3.06
9205 11430 7.595819 AATCACCCTAAAAGAAACACAATGA 57.404 32.000 0.00 0.00 0.00 2.57
9206 11431 8.550376 CAAAATCACCCTAAAAGAAACACAATG 58.450 33.333 0.00 0.00 0.00 2.82
9207 11432 7.714813 CCAAAATCACCCTAAAAGAAACACAAT 59.285 33.333 0.00 0.00 0.00 2.71
9208 11433 7.044798 CCAAAATCACCCTAAAAGAAACACAA 58.955 34.615 0.00 0.00 0.00 3.33
9209 11434 6.155393 ACCAAAATCACCCTAAAAGAAACACA 59.845 34.615 0.00 0.00 0.00 3.72
9210 11435 6.578944 ACCAAAATCACCCTAAAAGAAACAC 58.421 36.000 0.00 0.00 0.00 3.32
9211 11436 6.381420 TGACCAAAATCACCCTAAAAGAAACA 59.619 34.615 0.00 0.00 0.00 2.83
9212 11437 6.811954 TGACCAAAATCACCCTAAAAGAAAC 58.188 36.000 0.00 0.00 0.00 2.78
9213 11438 7.610580 ATGACCAAAATCACCCTAAAAGAAA 57.389 32.000 0.00 0.00 0.00 2.52
9214 11439 7.070571 ACAATGACCAAAATCACCCTAAAAGAA 59.929 33.333 0.00 0.00 0.00 2.52
9215 11440 6.553100 ACAATGACCAAAATCACCCTAAAAGA 59.447 34.615 0.00 0.00 0.00 2.52
9216 11441 6.646240 CACAATGACCAAAATCACCCTAAAAG 59.354 38.462 0.00 0.00 0.00 2.27
9217 11442 6.098982 ACACAATGACCAAAATCACCCTAAAA 59.901 34.615 0.00 0.00 0.00 1.52
9218 11443 5.600484 ACACAATGACCAAAATCACCCTAAA 59.400 36.000 0.00 0.00 0.00 1.85
9219 11444 5.144100 ACACAATGACCAAAATCACCCTAA 58.856 37.500 0.00 0.00 0.00 2.69
9220 11445 4.735369 ACACAATGACCAAAATCACCCTA 58.265 39.130 0.00 0.00 0.00 3.53
9221 11446 3.575805 ACACAATGACCAAAATCACCCT 58.424 40.909 0.00 0.00 0.00 4.34
9222 11447 4.057432 CAACACAATGACCAAAATCACCC 58.943 43.478 0.00 0.00 0.00 4.61
9223 11448 4.057432 CCAACACAATGACCAAAATCACC 58.943 43.478 0.00 0.00 0.00 4.02
9224 11449 4.507388 CACCAACACAATGACCAAAATCAC 59.493 41.667 0.00 0.00 0.00 3.06
9225 11450 4.442612 CCACCAACACAATGACCAAAATCA 60.443 41.667 0.00 0.00 0.00 2.57
9226 11451 4.057432 CCACCAACACAATGACCAAAATC 58.943 43.478 0.00 0.00 0.00 2.17
9227 11452 3.454082 ACCACCAACACAATGACCAAAAT 59.546 39.130 0.00 0.00 0.00 1.82
9228 11453 2.834549 ACCACCAACACAATGACCAAAA 59.165 40.909 0.00 0.00 0.00 2.44
9229 11454 2.461695 ACCACCAACACAATGACCAAA 58.538 42.857 0.00 0.00 0.00 3.28
9230 11455 2.151502 ACCACCAACACAATGACCAA 57.848 45.000 0.00 0.00 0.00 3.67
9231 11456 1.753649 CAACCACCAACACAATGACCA 59.246 47.619 0.00 0.00 0.00 4.02
9232 11457 1.537990 GCAACCACCAACACAATGACC 60.538 52.381 0.00 0.00 0.00 4.02
9233 11458 1.135915 TGCAACCACCAACACAATGAC 59.864 47.619 0.00 0.00 0.00 3.06
9234 11459 1.408340 CTGCAACCACCAACACAATGA 59.592 47.619 0.00 0.00 0.00 2.57
9235 11460 1.538634 CCTGCAACCACCAACACAATG 60.539 52.381 0.00 0.00 0.00 2.82
9236 11461 0.752054 CCTGCAACCACCAACACAAT 59.248 50.000 0.00 0.00 0.00 2.71
9237 11462 1.326213 CCCTGCAACCACCAACACAA 61.326 55.000 0.00 0.00 0.00 3.33
9238 11463 1.756172 CCCTGCAACCACCAACACA 60.756 57.895 0.00 0.00 0.00 3.72
9239 11464 1.454847 TCCCTGCAACCACCAACAC 60.455 57.895 0.00 0.00 0.00 3.32
9240 11465 1.454847 GTCCCTGCAACCACCAACA 60.455 57.895 0.00 0.00 0.00 3.33
9241 11466 2.551912 CGTCCCTGCAACCACCAAC 61.552 63.158 0.00 0.00 0.00 3.77
9242 11467 2.203280 CGTCCCTGCAACCACCAA 60.203 61.111 0.00 0.00 0.00 3.67
9243 11468 2.674563 CTTCGTCCCTGCAACCACCA 62.675 60.000 0.00 0.00 0.00 4.17
9244 11469 1.966451 CTTCGTCCCTGCAACCACC 60.966 63.158 0.00 0.00 0.00 4.61
9245 11470 0.534203 TTCTTCGTCCCTGCAACCAC 60.534 55.000 0.00 0.00 0.00 4.16
9246 11471 0.250295 CTTCTTCGTCCCTGCAACCA 60.250 55.000 0.00 0.00 0.00 3.67
9247 11472 0.955919 CCTTCTTCGTCCCTGCAACC 60.956 60.000 0.00 0.00 0.00 3.77
9248 11473 0.034896 TCCTTCTTCGTCCCTGCAAC 59.965 55.000 0.00 0.00 0.00 4.17
9249 11474 0.984230 ATCCTTCTTCGTCCCTGCAA 59.016 50.000 0.00 0.00 0.00 4.08
9250 11475 0.984230 AATCCTTCTTCGTCCCTGCA 59.016 50.000 0.00 0.00 0.00 4.41
9251 11476 2.115343 AAATCCTTCTTCGTCCCTGC 57.885 50.000 0.00 0.00 0.00 4.85
9252 11477 3.686726 CAGAAAATCCTTCTTCGTCCCTG 59.313 47.826 0.00 0.00 0.00 4.45
9253 11478 3.328050 ACAGAAAATCCTTCTTCGTCCCT 59.672 43.478 0.00 0.00 0.00 4.20
9254 11479 3.437049 CACAGAAAATCCTTCTTCGTCCC 59.563 47.826 0.00 0.00 0.00 4.46
9255 11480 4.315803 TCACAGAAAATCCTTCTTCGTCC 58.684 43.478 0.00 0.00 0.00 4.79
9256 11481 5.467063 ACTTCACAGAAAATCCTTCTTCGTC 59.533 40.000 0.00 0.00 0.00 4.20
9257 11482 5.237344 CACTTCACAGAAAATCCTTCTTCGT 59.763 40.000 0.00 0.00 0.00 3.85
9258 11483 5.466728 TCACTTCACAGAAAATCCTTCTTCG 59.533 40.000 0.00 0.00 0.00 3.79
9259 11484 6.564873 CGTCACTTCACAGAAAATCCTTCTTC 60.565 42.308 0.00 0.00 0.00 2.87
9260 11485 5.237344 CGTCACTTCACAGAAAATCCTTCTT 59.763 40.000 0.00 0.00 0.00 2.52
9261 11486 4.752101 CGTCACTTCACAGAAAATCCTTCT 59.248 41.667 0.00 0.00 0.00 2.85
9262 11487 4.750098 TCGTCACTTCACAGAAAATCCTTC 59.250 41.667 0.00 0.00 0.00 3.46
9263 11488 4.703897 TCGTCACTTCACAGAAAATCCTT 58.296 39.130 0.00 0.00 0.00 3.36
9264 11489 4.202264 ACTCGTCACTTCACAGAAAATCCT 60.202 41.667 0.00 0.00 0.00 3.24
9265 11490 4.058817 ACTCGTCACTTCACAGAAAATCC 58.941 43.478 0.00 0.00 0.00 3.01
9266 11491 4.143514 CGACTCGTCACTTCACAGAAAATC 60.144 45.833 0.00 0.00 0.00 2.17
9267 11492 3.736252 CGACTCGTCACTTCACAGAAAAT 59.264 43.478 0.00 0.00 0.00 1.82
9268 11493 3.113322 CGACTCGTCACTTCACAGAAAA 58.887 45.455 0.00 0.00 0.00 2.29
9269 11494 2.543031 CCGACTCGTCACTTCACAGAAA 60.543 50.000 0.00 0.00 0.00 2.52
9270 11495 1.001706 CCGACTCGTCACTTCACAGAA 60.002 52.381 0.00 0.00 0.00 3.02
9271 11496 0.591659 CCGACTCGTCACTTCACAGA 59.408 55.000 0.00 0.00 0.00 3.41
9272 11497 0.311165 ACCGACTCGTCACTTCACAG 59.689 55.000 0.00 0.00 0.00 3.66
9273 11498 0.030235 CACCGACTCGTCACTTCACA 59.970 55.000 0.00 0.00 0.00 3.58
9274 11499 0.030369 ACACCGACTCGTCACTTCAC 59.970 55.000 0.00 0.00 0.00 3.18
9275 11500 0.309922 GACACCGACTCGTCACTTCA 59.690 55.000 0.00 0.00 32.24 3.02
9276 11501 0.592148 AGACACCGACTCGTCACTTC 59.408 55.000 0.00 0.00 34.48 3.01
9277 11502 0.311165 CAGACACCGACTCGTCACTT 59.689 55.000 0.00 0.00 34.48 3.16
9278 11503 0.534427 TCAGACACCGACTCGTCACT 60.534 55.000 0.00 0.00 34.48 3.41
9279 11504 0.522180 ATCAGACACCGACTCGTCAC 59.478 55.000 0.00 0.00 34.48 3.67
9280 11505 1.244816 AATCAGACACCGACTCGTCA 58.755 50.000 0.00 0.00 34.48 4.35
9281 11506 2.349297 AAATCAGACACCGACTCGTC 57.651 50.000 0.00 0.00 0.00 4.20
9282 11507 2.163815 CCTAAATCAGACACCGACTCGT 59.836 50.000 0.00 0.00 0.00 4.18
9283 11508 2.422479 TCCTAAATCAGACACCGACTCG 59.578 50.000 0.00 0.00 0.00 4.18
9284 11509 4.500035 GGATCCTAAATCAGACACCGACTC 60.500 50.000 3.84 0.00 0.00 3.36
9285 11510 3.385111 GGATCCTAAATCAGACACCGACT 59.615 47.826 3.84 0.00 0.00 4.18
9286 11511 3.718815 GGATCCTAAATCAGACACCGAC 58.281 50.000 3.84 0.00 0.00 4.79
9287 11512 2.361119 CGGATCCTAAATCAGACACCGA 59.639 50.000 10.75 0.00 40.16 4.69
9288 11513 2.100916 ACGGATCCTAAATCAGACACCG 59.899 50.000 10.75 0.00 42.78 4.94
9289 11514 3.385111 AGACGGATCCTAAATCAGACACC 59.615 47.826 10.75 0.00 0.00 4.16
9290 11515 4.657436 AGACGGATCCTAAATCAGACAC 57.343 45.455 10.75 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.