Multiple sequence alignment - TraesCS1B01G133800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G133800 chr1B 100.000 5176 0 0 1 5176 169535963 169530788 0.000000e+00 9559.0
1 TraesCS1B01G133800 chr1B 87.411 842 70 19 3650 4485 168977408 168976597 0.000000e+00 935.0
2 TraesCS1B01G133800 chr1B 88.854 323 23 7 4477 4794 168976095 168975781 8.130000e-103 385.0
3 TraesCS1B01G133800 chr1B 92.857 126 9 0 4906 5031 168975714 168975589 3.180000e-42 183.0
4 TraesCS1B01G133800 chr1B 94.898 98 4 1 4810 4907 426466161 426466257 8.980000e-33 152.0
5 TraesCS1B01G133800 chr1B 71.787 319 83 6 104 417 398905363 398905047 3.320000e-12 84.2
6 TraesCS1B01G133800 chr1A 91.944 4394 231 60 466 4800 117190674 117186345 0.000000e+00 6039.0
7 TraesCS1B01G133800 chr1A 91.771 875 54 9 3611 4481 116707288 116706428 0.000000e+00 1201.0
8 TraesCS1B01G133800 chr1A 88.889 252 20 5 4477 4727 116702900 116702656 2.340000e-78 303.0
9 TraesCS1B01G133800 chr1A 91.358 81 7 0 5096 5176 117185925 117185845 1.520000e-20 111.0
10 TraesCS1B01G133800 chr1D 93.032 2282 92 14 483 2737 111005882 111003641 0.000000e+00 3271.0
11 TraesCS1B01G133800 chr1D 92.355 2119 111 27 2722 4821 111003625 111001539 0.000000e+00 2968.0
12 TraesCS1B01G133800 chr1D 90.275 874 55 9 3611 4481 110777149 110776303 0.000000e+00 1116.0
13 TraesCS1B01G133800 chr1D 89.783 323 24 5 4477 4798 110774618 110774304 6.240000e-109 405.0
14 TraesCS1B01G133800 chr1D 83.041 342 39 4 454 781 111007717 111007381 5.070000e-75 292.0
15 TraesCS1B01G133800 chr1D 83.553 304 18 7 781 1066 111006170 111005881 6.650000e-64 255.0
16 TraesCS1B01G133800 chr1D 96.183 131 4 1 4902 5031 111001541 111001411 4.060000e-51 213.0
17 TraesCS1B01G133800 chr1D 88.272 162 9 8 2815 2974 341037336 341037489 8.850000e-43 185.0
18 TraesCS1B01G133800 chr1D 88.976 127 10 2 4905 5031 110774226 110774104 2.500000e-33 154.0
19 TraesCS1B01G133800 chr6D 88.679 159 10 7 2815 2971 392273074 392273226 2.460000e-43 187.0
20 TraesCS1B01G133800 chr5A 88.125 160 13 6 2815 2974 354544084 354544237 8.850000e-43 185.0
21 TraesCS1B01G133800 chr5A 93.137 102 4 3 4806 4904 450750809 450750708 4.180000e-31 147.0
22 TraesCS1B01G133800 chr2A 88.199 161 11 7 2815 2973 141506470 141506316 8.850000e-43 185.0
23 TraesCS1B01G133800 chr6B 88.125 160 11 8 2815 2972 617176734 617176581 3.180000e-42 183.0
24 TraesCS1B01G133800 chr6B 93.750 96 6 0 4809 4904 13827515 13827610 1.500000e-30 145.0
25 TraesCS1B01G133800 chr6B 95.556 45 2 0 373 417 30060072 30060116 7.190000e-09 73.1
26 TraesCS1B01G133800 chr4B 86.905 168 14 7 2806 2971 106227400 106227561 1.140000e-41 182.0
27 TraesCS1B01G133800 chr2B 86.391 169 15 7 2815 2981 190023043 190022881 1.480000e-40 178.0
28 TraesCS1B01G133800 chr2B 95.699 93 4 0 4814 4906 650285645 650285737 3.230000e-32 150.0
29 TraesCS1B01G133800 chr2B 94.624 93 5 0 4817 4909 790112939 790113031 1.500000e-30 145.0
30 TraesCS1B01G133800 chr2D 97.727 88 2 0 4819 4906 577577902 577577815 8.980000e-33 152.0
31 TraesCS1B01G133800 chr2D 89.908 109 8 3 4812 4919 117843132 117843026 2.510000e-28 137.0
32 TraesCS1B01G133800 chr3B 94.000 100 5 1 4810 4909 408415109 408415207 3.230000e-32 150.0
33 TraesCS1B01G133800 chr5B 93.137 102 4 3 4806 4904 411034879 411034778 4.180000e-31 147.0
34 TraesCS1B01G133800 chr7D 72.401 279 60 14 149 417 632044156 632043885 7.190000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G133800 chr1B 169530788 169535963 5175 True 9559.000000 9559 100.000000 1 5176 1 chr1B.!!$R1 5175
1 TraesCS1B01G133800 chr1B 168975589 168977408 1819 True 501.000000 935 89.707333 3650 5031 3 chr1B.!!$R3 1381
2 TraesCS1B01G133800 chr1A 117185845 117190674 4829 True 3075.000000 6039 91.651000 466 5176 2 chr1A.!!$R2 4710
3 TraesCS1B01G133800 chr1A 116702656 116707288 4632 True 752.000000 1201 90.330000 3611 4727 2 chr1A.!!$R1 1116
4 TraesCS1B01G133800 chr1D 111001411 111007717 6306 True 1399.800000 3271 89.632800 454 5031 5 chr1D.!!$R2 4577
5 TraesCS1B01G133800 chr1D 110774104 110777149 3045 True 558.333333 1116 89.678000 3611 5031 3 chr1D.!!$R1 1420

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
382 383 0.037605 AAAGCTCGACACCGGGTTAG 60.038 55.000 6.32 4.43 38.83 2.34 F
416 417 0.107361 CCATCTAACCCCGACCCAAC 60.107 60.000 0.00 0.00 0.00 3.77 F
418 419 0.253020 ATCTAACCCCGACCCAACCT 60.253 55.000 0.00 0.00 0.00 3.50 F
612 627 0.461961 CCTAGGGACGAAGCAAGGAG 59.538 60.000 0.00 0.00 0.00 3.69 F
1820 3658 1.000396 GTGGGCTGGGAATTGCTCT 60.000 57.895 0.00 0.00 0.00 4.09 F
3023 4916 1.000843 GTGGAGCAATTGGGGTGTTTC 59.999 52.381 7.72 0.00 0.00 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2121 3959 0.246635 CTTGAGGTACCCGGAGTGTG 59.753 60.000 8.74 0.0 0.00 3.82 R
2190 4028 1.608717 CTTCCCACTCCCACTCCTCG 61.609 65.000 0.00 0.0 0.00 4.63 R
2241 4079 2.204291 TTGATGGCCCTGGACCCT 60.204 61.111 0.00 0.0 0.00 4.34 R
2518 4356 4.398319 CCAACAAACTCCATCAAGGTAGT 58.602 43.478 0.00 0.0 39.02 2.73 R
3178 5071 0.099436 CTTTCCATAGCAAGGCACGC 59.901 55.000 0.00 0.0 0.00 5.34 R
4678 10850 0.892814 AGCTCCAAGACAAAGCAGCC 60.893 55.000 0.00 0.0 38.51 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.263572 CGGTCCCCTGTGGCACAA 62.264 66.667 22.31 3.37 44.16 3.33
92 93 2.597510 GGTCCCCTGTGGCACAAC 60.598 66.667 22.31 16.06 44.16 3.32
93 94 2.978010 GTCCCCTGTGGCACAACG 60.978 66.667 22.31 14.01 44.16 4.10
94 95 4.263572 TCCCCTGTGGCACAACGG 62.264 66.667 22.31 21.64 44.16 4.44
95 96 4.263572 CCCCTGTGGCACAACGGA 62.264 66.667 26.91 4.87 44.16 4.69
96 97 2.978010 CCCTGTGGCACAACGGAC 60.978 66.667 23.36 0.00 44.16 4.79
97 98 2.111043 CCTGTGGCACAACGGACT 59.889 61.111 22.31 0.00 44.16 3.85
98 99 1.525995 CCTGTGGCACAACGGACTT 60.526 57.895 22.31 0.00 44.16 3.01
99 100 1.507141 CCTGTGGCACAACGGACTTC 61.507 60.000 22.31 0.00 44.16 3.01
100 101 0.532862 CTGTGGCACAACGGACTTCT 60.533 55.000 22.31 0.00 44.16 2.85
101 102 0.107410 TGTGGCACAACGGACTTCTT 60.107 50.000 19.74 0.00 44.16 2.52
102 103 0.586802 GTGGCACAACGGACTTCTTC 59.413 55.000 13.86 0.00 44.16 2.87
103 104 0.534203 TGGCACAACGGACTTCTTCC 60.534 55.000 0.00 0.00 36.64 3.46
104 105 1.235281 GGCACAACGGACTTCTTCCC 61.235 60.000 0.00 0.00 42.27 3.97
105 106 1.235281 GCACAACGGACTTCTTCCCC 61.235 60.000 0.00 0.00 42.27 4.81
107 108 1.375523 CAACGGACTTCTTCCCCGG 60.376 63.158 0.00 0.00 46.83 5.73
108 109 3.249837 AACGGACTTCTTCCCCGGC 62.250 63.158 0.00 0.00 46.83 6.13
109 110 4.814294 CGGACTTCTTCCCCGGCG 62.814 72.222 0.00 0.00 42.27 6.46
110 111 4.468689 GGACTTCTTCCCCGGCGG 62.469 72.222 21.46 21.46 38.70 6.13
113 114 4.715523 CTTCTTCCCCGGCGGCAA 62.716 66.667 23.20 14.38 0.00 4.52
114 115 4.715523 TTCTTCCCCGGCGGCAAG 62.716 66.667 23.20 23.09 0.00 4.01
125 126 4.760047 CGGCAAGGACCCTCCACG 62.760 72.222 0.00 0.00 39.61 4.94
126 127 3.319198 GGCAAGGACCCTCCACGA 61.319 66.667 0.00 0.00 39.61 4.35
127 128 2.047179 GCAAGGACCCTCCACGAC 60.047 66.667 0.00 0.00 39.61 4.34
128 129 2.663196 CAAGGACCCTCCACGACC 59.337 66.667 0.00 0.00 39.61 4.79
129 130 2.606826 AAGGACCCTCCACGACCC 60.607 66.667 0.00 0.00 39.61 4.46
135 136 4.530857 CCTCCACGACCCGCCATC 62.531 72.222 0.00 0.00 0.00 3.51
136 137 4.873129 CTCCACGACCCGCCATCG 62.873 72.222 0.00 0.00 45.17 3.84
142 143 4.137872 GACCCGCCATCGTTCCGA 62.138 66.667 0.00 0.00 41.13 4.55
143 144 4.143333 ACCCGCCATCGTTCCGAG 62.143 66.667 0.00 0.00 39.91 4.63
147 148 4.508128 GCCATCGTTCCGAGCGGA 62.508 66.667 7.66 7.66 39.91 5.54
148 149 2.278857 CCATCGTTCCGAGCGGAG 60.279 66.667 11.80 1.85 46.06 4.63
149 150 2.278857 CATCGTTCCGAGCGGAGG 60.279 66.667 11.80 8.48 46.06 4.30
150 151 2.439701 ATCGTTCCGAGCGGAGGA 60.440 61.111 11.80 13.25 46.06 3.71
151 152 2.050350 ATCGTTCCGAGCGGAGGAA 61.050 57.895 11.80 6.51 46.06 3.36
155 156 1.731700 TTCCGAGCGGAGGAATACG 59.268 57.895 11.80 0.00 46.06 3.06
162 163 2.029221 GGAGGAATACGCCGAGCC 59.971 66.667 0.00 0.00 0.00 4.70
163 164 2.029221 GAGGAATACGCCGAGCCC 59.971 66.667 0.00 0.00 0.00 5.19
164 165 2.444140 AGGAATACGCCGAGCCCT 60.444 61.111 0.00 0.00 0.00 5.19
165 166 1.152610 AGGAATACGCCGAGCCCTA 60.153 57.895 0.00 0.00 0.00 3.53
166 167 1.006454 GGAATACGCCGAGCCCTAC 60.006 63.158 0.00 0.00 0.00 3.18
167 168 1.006454 GAATACGCCGAGCCCTACC 60.006 63.158 0.00 0.00 0.00 3.18
168 169 1.741327 GAATACGCCGAGCCCTACCA 61.741 60.000 0.00 0.00 0.00 3.25
169 170 2.024590 AATACGCCGAGCCCTACCAC 62.025 60.000 0.00 0.00 0.00 4.16
173 174 4.798682 CCGAGCCCTACCACCCCT 62.799 72.222 0.00 0.00 0.00 4.79
174 175 2.281091 CGAGCCCTACCACCCCTA 59.719 66.667 0.00 0.00 0.00 3.53
175 176 1.833049 CGAGCCCTACCACCCCTAG 60.833 68.421 0.00 0.00 0.00 3.02
176 177 2.040779 AGCCCTACCACCCCTAGC 60.041 66.667 0.00 0.00 0.00 3.42
177 178 3.169242 GCCCTACCACCCCTAGCC 61.169 72.222 0.00 0.00 0.00 3.93
178 179 2.842936 CCCTACCACCCCTAGCCG 60.843 72.222 0.00 0.00 0.00 5.52
179 180 2.281091 CCTACCACCCCTAGCCGA 59.719 66.667 0.00 0.00 0.00 5.54
180 181 1.382146 CCTACCACCCCTAGCCGAA 60.382 63.158 0.00 0.00 0.00 4.30
181 182 1.683418 CCTACCACCCCTAGCCGAAC 61.683 65.000 0.00 0.00 0.00 3.95
182 183 2.012902 CTACCACCCCTAGCCGAACG 62.013 65.000 0.00 0.00 0.00 3.95
183 184 4.157120 CCACCCCTAGCCGAACGG 62.157 72.222 9.00 9.00 38.57 4.44
184 185 3.072468 CACCCCTAGCCGAACGGA 61.072 66.667 17.63 0.00 37.50 4.69
185 186 2.758737 ACCCCTAGCCGAACGGAG 60.759 66.667 17.63 6.23 37.50 4.63
186 187 3.537874 CCCCTAGCCGAACGGAGG 61.538 72.222 17.63 14.52 37.50 4.30
187 188 2.758737 CCCTAGCCGAACGGAGGT 60.759 66.667 17.63 3.20 37.50 3.85
188 189 2.356780 CCCTAGCCGAACGGAGGTT 61.357 63.158 17.63 1.88 39.63 3.50
189 190 1.595357 CCTAGCCGAACGGAGGTTT 59.405 57.895 17.63 0.00 36.24 3.27
190 191 0.739813 CCTAGCCGAACGGAGGTTTG 60.740 60.000 17.63 0.72 36.24 2.93
195 196 2.823628 CGAACGGAGGTTTGGACTC 58.176 57.895 0.00 0.00 36.24 3.36
199 200 2.046217 GGAGGTTTGGACTCCGGC 60.046 66.667 0.00 0.00 44.50 6.13
200 201 2.434359 GAGGTTTGGACTCCGGCG 60.434 66.667 0.00 0.00 0.00 6.46
201 202 2.920912 AGGTTTGGACTCCGGCGA 60.921 61.111 9.30 0.00 0.00 5.54
202 203 2.240162 GAGGTTTGGACTCCGGCGAT 62.240 60.000 9.30 0.00 0.00 4.58
203 204 2.106683 GGTTTGGACTCCGGCGATG 61.107 63.158 9.30 2.50 0.00 3.84
204 205 1.079405 GTTTGGACTCCGGCGATGA 60.079 57.895 9.30 0.00 0.00 2.92
205 206 1.079405 TTTGGACTCCGGCGATGAC 60.079 57.895 9.30 0.33 0.00 3.06
206 207 2.829043 TTTGGACTCCGGCGATGACG 62.829 60.000 9.30 0.00 42.93 4.35
207 208 3.515286 GGACTCCGGCGATGACGA 61.515 66.667 9.30 0.00 42.66 4.20
208 209 2.488355 GACTCCGGCGATGACGAA 59.512 61.111 9.30 0.00 42.66 3.85
209 210 1.872679 GACTCCGGCGATGACGAAC 60.873 63.158 9.30 0.00 42.66 3.95
210 211 2.582498 CTCCGGCGATGACGAACC 60.582 66.667 9.30 0.00 42.66 3.62
211 212 4.137872 TCCGGCGATGACGAACCC 62.138 66.667 9.30 0.00 42.66 4.11
212 213 4.143333 CCGGCGATGACGAACCCT 62.143 66.667 9.30 0.00 42.66 4.34
213 214 2.777972 CCGGCGATGACGAACCCTA 61.778 63.158 9.30 0.00 42.66 3.53
214 215 1.140161 CGGCGATGACGAACCCTAA 59.860 57.895 0.00 0.00 42.66 2.69
215 216 1.143969 CGGCGATGACGAACCCTAAC 61.144 60.000 0.00 0.00 42.66 2.34
216 217 0.175073 GGCGATGACGAACCCTAACT 59.825 55.000 0.00 0.00 42.66 2.24
217 218 1.278238 GCGATGACGAACCCTAACTG 58.722 55.000 0.00 0.00 42.66 3.16
218 219 1.922570 CGATGACGAACCCTAACTGG 58.077 55.000 0.00 0.00 42.66 4.00
219 220 1.653151 GATGACGAACCCTAACTGGC 58.347 55.000 0.00 0.00 0.00 4.85
220 221 0.108329 ATGACGAACCCTAACTGGCG 60.108 55.000 0.00 0.00 0.00 5.69
221 222 1.447314 GACGAACCCTAACTGGCGG 60.447 63.158 0.00 0.00 0.00 6.13
222 223 2.818274 CGAACCCTAACTGGCGGC 60.818 66.667 0.00 0.00 0.00 6.53
223 224 2.349755 GAACCCTAACTGGCGGCA 59.650 61.111 12.58 12.58 0.00 5.69
224 225 2.033602 AACCCTAACTGGCGGCAC 59.966 61.111 7.97 0.00 0.00 5.01
242 243 4.258781 GGTACGACACGACGATCG 57.741 61.111 14.88 14.88 46.93 3.69
243 244 1.931612 GGTACGACACGACGATCGC 60.932 63.158 16.60 7.26 45.12 4.58
244 245 1.225827 GTACGACACGACGATCGCA 60.226 57.895 16.60 9.76 45.12 5.10
245 246 1.225827 TACGACACGACGATCGCAC 60.226 57.895 16.60 8.94 45.12 5.34
246 247 1.629345 TACGACACGACGATCGCACT 61.629 55.000 16.60 0.00 45.12 4.40
247 248 1.059838 CGACACGACGATCGCACTA 59.940 57.895 16.60 0.00 45.12 2.74
248 249 0.519792 CGACACGACGATCGCACTAA 60.520 55.000 16.60 0.00 45.12 2.24
249 250 1.609932 GACACGACGATCGCACTAAA 58.390 50.000 16.60 0.00 45.12 1.85
250 251 1.578023 GACACGACGATCGCACTAAAG 59.422 52.381 16.60 1.48 45.12 1.85
251 252 1.198408 ACACGACGATCGCACTAAAGA 59.802 47.619 16.60 0.00 45.12 2.52
252 253 1.578023 CACGACGATCGCACTAAAGAC 59.422 52.381 16.60 0.00 45.12 3.01
253 254 1.198408 ACGACGATCGCACTAAAGACA 59.802 47.619 16.60 0.00 45.12 3.41
254 255 1.578023 CGACGATCGCACTAAAGACAC 59.422 52.381 16.60 0.00 31.14 3.67
255 256 2.728225 CGACGATCGCACTAAAGACACT 60.728 50.000 16.60 0.00 31.14 3.55
256 257 2.594654 GACGATCGCACTAAAGACACTG 59.405 50.000 16.60 0.00 0.00 3.66
257 258 1.321743 CGATCGCACTAAAGACACTGC 59.678 52.381 0.26 0.00 0.00 4.40
258 259 1.661112 GATCGCACTAAAGACACTGCC 59.339 52.381 0.00 0.00 0.00 4.85
259 260 0.679505 TCGCACTAAAGACACTGCCT 59.320 50.000 0.00 0.00 0.00 4.75
260 261 1.071605 CGCACTAAAGACACTGCCTC 58.928 55.000 0.00 0.00 0.00 4.70
261 262 1.071605 GCACTAAAGACACTGCCTCG 58.928 55.000 0.00 0.00 0.00 4.63
262 263 1.605712 GCACTAAAGACACTGCCTCGT 60.606 52.381 0.00 0.00 0.00 4.18
263 264 2.329379 CACTAAAGACACTGCCTCGTC 58.671 52.381 0.00 0.00 0.00 4.20
264 265 1.272769 ACTAAAGACACTGCCTCGTCC 59.727 52.381 0.00 0.00 32.33 4.79
265 266 1.546476 CTAAAGACACTGCCTCGTCCT 59.454 52.381 0.00 0.00 32.33 3.85
266 267 0.318762 AAAGACACTGCCTCGTCCTC 59.681 55.000 0.00 0.00 32.33 3.71
267 268 0.827925 AAGACACTGCCTCGTCCTCA 60.828 55.000 0.00 0.00 32.33 3.86
268 269 0.827925 AGACACTGCCTCGTCCTCAA 60.828 55.000 0.00 0.00 32.33 3.02
269 270 0.247736 GACACTGCCTCGTCCTCAAT 59.752 55.000 0.00 0.00 0.00 2.57
270 271 1.476891 GACACTGCCTCGTCCTCAATA 59.523 52.381 0.00 0.00 0.00 1.90
271 272 1.478510 ACACTGCCTCGTCCTCAATAG 59.521 52.381 0.00 0.00 0.00 1.73
272 273 0.461961 ACTGCCTCGTCCTCAATAGC 59.538 55.000 0.00 0.00 0.00 2.97
273 274 0.596083 CTGCCTCGTCCTCAATAGCG 60.596 60.000 0.00 0.00 0.00 4.26
274 275 1.035385 TGCCTCGTCCTCAATAGCGA 61.035 55.000 0.00 0.00 0.00 4.93
275 276 0.315568 GCCTCGTCCTCAATAGCGAT 59.684 55.000 0.00 0.00 32.79 4.58
276 277 1.667467 GCCTCGTCCTCAATAGCGATC 60.667 57.143 0.00 0.00 32.79 3.69
277 278 1.400371 CCTCGTCCTCAATAGCGATCG 60.400 57.143 11.69 11.69 32.79 3.69
278 279 0.591659 TCGTCCTCAATAGCGATCGG 59.408 55.000 18.30 0.00 0.00 4.18
279 280 0.387367 CGTCCTCAATAGCGATCGGG 60.387 60.000 18.30 7.62 0.00 5.14
280 281 0.959553 GTCCTCAATAGCGATCGGGA 59.040 55.000 18.30 10.04 0.00 5.14
281 282 0.959553 TCCTCAATAGCGATCGGGAC 59.040 55.000 18.30 0.00 0.00 4.46
282 283 0.673985 CCTCAATAGCGATCGGGACA 59.326 55.000 18.30 0.00 0.00 4.02
283 284 1.336332 CCTCAATAGCGATCGGGACAG 60.336 57.143 18.30 0.00 0.00 3.51
284 285 0.673985 TCAATAGCGATCGGGACAGG 59.326 55.000 18.30 0.00 0.00 4.00
285 286 0.673985 CAATAGCGATCGGGACAGGA 59.326 55.000 18.30 0.00 0.00 3.86
286 287 1.273606 CAATAGCGATCGGGACAGGAT 59.726 52.381 18.30 0.00 0.00 3.24
287 288 1.178276 ATAGCGATCGGGACAGGATC 58.822 55.000 18.30 0.00 37.52 3.36
288 289 0.179001 TAGCGATCGGGACAGGATCA 60.179 55.000 18.30 0.00 40.21 2.92
289 290 1.043116 AGCGATCGGGACAGGATCAA 61.043 55.000 18.30 0.00 40.21 2.57
290 291 0.876342 GCGATCGGGACAGGATCAAC 60.876 60.000 18.30 0.00 40.21 3.18
291 292 0.249489 CGATCGGGACAGGATCAACC 60.249 60.000 7.38 0.00 40.21 3.77
300 301 3.415186 GGATCAACCTGGGCCTCA 58.585 61.111 4.53 0.00 35.41 3.86
301 302 1.925888 GGATCAACCTGGGCCTCAT 59.074 57.895 4.53 0.00 35.41 2.90
302 303 1.140312 GGATCAACCTGGGCCTCATA 58.860 55.000 4.53 0.00 35.41 2.15
303 304 1.202818 GGATCAACCTGGGCCTCATAC 60.203 57.143 4.53 0.00 35.41 2.39
304 305 0.846693 ATCAACCTGGGCCTCATACC 59.153 55.000 4.53 0.00 0.00 2.73
314 315 1.832912 CCTCATACCCAGGCACTCC 59.167 63.158 0.00 0.00 34.60 3.85
315 316 1.700042 CCTCATACCCAGGCACTCCC 61.700 65.000 0.00 0.00 34.60 4.30
316 317 2.032860 CTCATACCCAGGCACTCCCG 62.033 65.000 0.00 0.00 34.60 5.14
317 318 2.768344 ATACCCAGGCACTCCCGG 60.768 66.667 0.00 0.00 34.60 5.73
337 338 4.885270 CAACCACCGTGCCCACCA 62.885 66.667 0.00 0.00 0.00 4.17
338 339 4.887190 AACCACCGTGCCCACCAC 62.887 66.667 0.00 0.00 41.15 4.16
378 379 4.058797 AAAAAGCTCGACACCGGG 57.941 55.556 6.32 0.00 39.81 5.73
379 380 1.147600 AAAAAGCTCGACACCGGGT 59.852 52.632 6.32 0.00 38.83 5.28
380 381 0.464916 AAAAAGCTCGACACCGGGTT 60.465 50.000 6.32 0.00 38.83 4.11
381 382 0.393820 AAAAGCTCGACACCGGGTTA 59.606 50.000 6.32 0.00 38.83 2.85
382 383 0.037605 AAAGCTCGACACCGGGTTAG 60.038 55.000 6.32 4.43 38.83 2.34
383 384 2.502692 AAGCTCGACACCGGGTTAGC 62.503 60.000 6.32 13.53 38.83 3.09
384 385 3.003113 GCTCGACACCGGGTTAGCT 62.003 63.158 6.32 0.00 38.83 3.32
385 386 1.590147 CTCGACACCGGGTTAGCTT 59.410 57.895 6.32 0.00 36.24 3.74
386 387 0.736325 CTCGACACCGGGTTAGCTTG 60.736 60.000 6.32 0.00 36.24 4.01
387 388 1.740296 CGACACCGGGTTAGCTTGG 60.740 63.158 6.32 0.00 0.00 3.61
388 389 1.376812 GACACCGGGTTAGCTTGGG 60.377 63.158 6.32 0.00 0.00 4.12
389 390 2.750237 CACCGGGTTAGCTTGGGC 60.750 66.667 6.32 0.00 39.06 5.36
390 391 4.043100 ACCGGGTTAGCTTGGGCC 62.043 66.667 6.32 0.00 39.73 5.80
391 392 3.728373 CCGGGTTAGCTTGGGCCT 61.728 66.667 4.53 0.00 39.73 5.19
392 393 2.124695 CGGGTTAGCTTGGGCCTC 60.125 66.667 4.53 0.00 39.73 4.70
393 394 2.966732 CGGGTTAGCTTGGGCCTCA 61.967 63.158 4.53 0.00 39.73 3.86
394 395 1.615262 GGGTTAGCTTGGGCCTCAT 59.385 57.895 4.53 0.00 39.73 2.90
395 396 0.843984 GGGTTAGCTTGGGCCTCATA 59.156 55.000 4.53 0.00 39.73 2.15
396 397 1.477014 GGGTTAGCTTGGGCCTCATAC 60.477 57.143 4.53 0.00 39.73 2.39
397 398 1.477014 GGTTAGCTTGGGCCTCATACC 60.477 57.143 4.53 1.13 39.73 2.73
406 407 2.861147 GGCCTCATACCCATCTAACC 57.139 55.000 0.00 0.00 0.00 2.85
407 408 1.351350 GGCCTCATACCCATCTAACCC 59.649 57.143 0.00 0.00 0.00 4.11
408 409 1.351350 GCCTCATACCCATCTAACCCC 59.649 57.143 0.00 0.00 0.00 4.95
409 410 1.623811 CCTCATACCCATCTAACCCCG 59.376 57.143 0.00 0.00 0.00 5.73
410 411 2.605257 CTCATACCCATCTAACCCCGA 58.395 52.381 0.00 0.00 0.00 5.14
411 412 2.299297 CTCATACCCATCTAACCCCGAC 59.701 54.545 0.00 0.00 0.00 4.79
412 413 1.346722 CATACCCATCTAACCCCGACC 59.653 57.143 0.00 0.00 0.00 4.79
413 414 0.398948 TACCCATCTAACCCCGACCC 60.399 60.000 0.00 0.00 0.00 4.46
414 415 1.691337 CCCATCTAACCCCGACCCA 60.691 63.158 0.00 0.00 0.00 4.51
415 416 1.276140 CCCATCTAACCCCGACCCAA 61.276 60.000 0.00 0.00 0.00 4.12
416 417 0.107361 CCATCTAACCCCGACCCAAC 60.107 60.000 0.00 0.00 0.00 3.77
417 418 0.107361 CATCTAACCCCGACCCAACC 60.107 60.000 0.00 0.00 0.00 3.77
418 419 0.253020 ATCTAACCCCGACCCAACCT 60.253 55.000 0.00 0.00 0.00 3.50
419 420 1.196104 TCTAACCCCGACCCAACCTG 61.196 60.000 0.00 0.00 0.00 4.00
420 421 1.152074 TAACCCCGACCCAACCTGA 60.152 57.895 0.00 0.00 0.00 3.86
421 422 1.482748 TAACCCCGACCCAACCTGAC 61.483 60.000 0.00 0.00 0.00 3.51
422 423 2.928396 CCCCGACCCAACCTGACT 60.928 66.667 0.00 0.00 0.00 3.41
423 424 2.663196 CCCGACCCAACCTGACTC 59.337 66.667 0.00 0.00 0.00 3.36
424 425 2.261671 CCGACCCAACCTGACTCG 59.738 66.667 0.00 0.00 0.00 4.18
425 426 2.261671 CGACCCAACCTGACTCGG 59.738 66.667 0.00 0.00 0.00 4.63
426 427 2.571216 CGACCCAACCTGACTCGGT 61.571 63.158 0.00 0.00 39.48 4.69
427 428 1.292541 GACCCAACCTGACTCGGTC 59.707 63.158 0.00 0.00 35.89 4.79
428 429 2.168666 GACCCAACCTGACTCGGTCC 62.169 65.000 0.00 0.00 37.60 4.46
429 430 2.214216 CCCAACCTGACTCGGTCCA 61.214 63.158 2.23 0.00 35.89 4.02
430 431 1.004918 CCAACCTGACTCGGTCCAC 60.005 63.158 2.23 0.00 35.89 4.02
431 432 1.004918 CAACCTGACTCGGTCCACC 60.005 63.158 2.23 0.00 35.89 4.61
432 433 1.458777 AACCTGACTCGGTCCACCA 60.459 57.895 0.00 0.00 35.89 4.17
433 434 1.472662 AACCTGACTCGGTCCACCAG 61.473 60.000 0.00 0.00 35.89 4.00
434 435 2.262915 CTGACTCGGTCCACCAGC 59.737 66.667 0.00 0.00 35.14 4.85
435 436 2.523168 TGACTCGGTCCACCAGCA 60.523 61.111 0.00 0.00 35.14 4.41
436 437 2.099652 CTGACTCGGTCCACCAGCAA 62.100 60.000 0.00 0.00 35.14 3.91
437 438 1.668151 GACTCGGTCCACCAGCAAC 60.668 63.158 0.00 0.00 35.14 4.17
438 439 2.358737 CTCGGTCCACCAGCAACC 60.359 66.667 0.00 0.00 35.14 3.77
439 440 2.847234 TCGGTCCACCAGCAACCT 60.847 61.111 0.00 0.00 35.14 3.50
440 441 2.669569 CGGTCCACCAGCAACCTG 60.670 66.667 0.00 0.00 38.85 4.00
441 442 2.836154 GGTCCACCAGCAACCTGA 59.164 61.111 0.00 0.00 41.77 3.86
442 443 1.380302 GGTCCACCAGCAACCTGAT 59.620 57.895 0.00 0.00 41.77 2.90
443 444 0.678048 GGTCCACCAGCAACCTGATC 60.678 60.000 0.00 0.00 41.77 2.92
444 445 0.678048 GTCCACCAGCAACCTGATCC 60.678 60.000 0.00 0.00 41.77 3.36
445 446 1.746615 CCACCAGCAACCTGATCCG 60.747 63.158 0.00 0.00 41.77 4.18
446 447 1.746615 CACCAGCAACCTGATCCGG 60.747 63.158 0.91 0.91 41.77 5.14
447 448 2.825836 CCAGCAACCTGATCCGGC 60.826 66.667 2.58 0.00 41.77 6.13
448 449 2.825836 CAGCAACCTGATCCGGCC 60.826 66.667 2.58 0.00 41.77 6.13
449 450 4.115199 AGCAACCTGATCCGGCCC 62.115 66.667 2.58 0.00 0.00 5.80
451 452 3.781307 CAACCTGATCCGGCCCGA 61.781 66.667 3.71 0.00 0.00 5.14
452 453 3.470888 AACCTGATCCGGCCCGAG 61.471 66.667 3.71 0.00 0.00 4.63
458 459 4.162690 ATCCGGCCCGAGAACTGC 62.163 66.667 3.71 0.00 0.00 4.40
464 465 4.069232 CCCGAGAACTGCGCCAGA 62.069 66.667 4.18 0.00 35.18 3.86
499 500 1.527380 GTCGGCAGGTGGGAAACAA 60.527 57.895 0.00 0.00 0.00 2.83
579 580 3.297736 ACGAAACAGATACCCTAGGGAG 58.702 50.000 35.38 18.87 38.96 4.30
603 618 2.168496 CTGAACTGTTCCTAGGGACGA 58.832 52.381 15.80 4.11 0.00 4.20
612 627 0.461961 CCTAGGGACGAAGCAAGGAG 59.538 60.000 0.00 0.00 0.00 3.69
663 2485 1.063174 GCGCTGACTTTTCCTATGCAG 59.937 52.381 0.00 0.00 0.00 4.41
671 2493 6.296026 TGACTTTTCCTATGCAGTTGTACTT 58.704 36.000 0.00 0.00 0.00 2.24
679 2501 4.558226 ATGCAGTTGTACTTGAGGATGA 57.442 40.909 0.00 0.00 0.00 2.92
683 2505 4.003648 CAGTTGTACTTGAGGATGAACCC 58.996 47.826 0.00 0.00 40.05 4.11
704 2526 7.771927 ACCCATCAATTATTCATCCTTGATC 57.228 36.000 0.00 0.00 36.47 2.92
708 2530 7.450634 CCATCAATTATTCATCCTTGATCTGGT 59.549 37.037 0.00 0.00 36.47 4.00
709 2531 8.857098 CATCAATTATTCATCCTTGATCTGGTT 58.143 33.333 0.00 0.00 36.47 3.67
710 2532 8.827832 TCAATTATTCATCCTTGATCTGGTTT 57.172 30.769 0.00 0.00 0.00 3.27
711 2533 9.919416 TCAATTATTCATCCTTGATCTGGTTTA 57.081 29.630 0.00 0.00 0.00 2.01
744 2566 6.455360 ACGAGATTGTCCAAATATGCATTT 57.545 33.333 3.54 0.00 34.60 2.32
748 2570 8.344831 CGAGATTGTCCAAATATGCATTTCTTA 58.655 33.333 3.54 0.00 31.82 2.10
749 2571 9.674824 GAGATTGTCCAAATATGCATTTCTTAG 57.325 33.333 3.54 0.00 31.82 2.18
781 2603 2.969821 TTGGGCTCAACAGTTATGGT 57.030 45.000 0.00 0.00 0.00 3.55
782 2604 2.969821 TGGGCTCAACAGTTATGGTT 57.030 45.000 0.00 0.00 0.00 3.67
783 2605 3.237268 TGGGCTCAACAGTTATGGTTT 57.763 42.857 0.00 0.00 0.00 3.27
845 2677 7.259088 ACTTGTAGAATTAGTCCCTCAACAT 57.741 36.000 0.00 0.00 0.00 2.71
874 2706 4.704965 ACTCGTAGAATTAGGAAATGGCC 58.295 43.478 0.00 0.00 34.09 5.36
892 2726 2.742589 GGCCTAACCGTTCTCAGAAAAG 59.257 50.000 0.00 0.00 0.00 2.27
895 2733 4.514066 GCCTAACCGTTCTCAGAAAAGAAA 59.486 41.667 0.00 0.00 37.04 2.52
958 2796 4.443934 CCAGTTCGGTCTCCTCCT 57.556 61.111 0.00 0.00 0.00 3.69
1269 3107 1.604592 CCTCCCCCTACTCCTTCCCT 61.605 65.000 0.00 0.00 0.00 4.20
1377 3215 2.525629 TGGGAGCCGTTCACAGGA 60.526 61.111 0.00 0.00 33.16 3.86
1511 3349 2.543653 GCATTGTCTTGGTGTTCACCAC 60.544 50.000 22.14 12.75 43.74 4.16
1691 3529 1.453155 CTGTACCTTGATGGGCACAC 58.547 55.000 0.00 0.00 41.11 3.82
1756 3594 3.650369 CGGAACCGGACTTTGGTG 58.350 61.111 9.46 0.00 40.35 4.17
1757 3595 2.613506 CGGAACCGGACTTTGGTGC 61.614 63.158 9.46 0.00 40.35 5.01
1819 3657 2.054453 GGTGGGCTGGGAATTGCTC 61.054 63.158 0.00 0.00 0.00 4.26
1820 3658 1.000396 GTGGGCTGGGAATTGCTCT 60.000 57.895 0.00 0.00 0.00 4.09
1831 3669 3.432749 GGGAATTGCTCTAGCTGATGACA 60.433 47.826 0.00 0.00 42.66 3.58
1838 3676 3.683847 GCTCTAGCTGATGACAATGGGTT 60.684 47.826 0.00 0.00 38.21 4.11
1839 3677 4.125703 CTCTAGCTGATGACAATGGGTTC 58.874 47.826 0.00 0.00 0.00 3.62
1964 3802 3.700038 AGGTCGTCGTCCTCAAGAATAAT 59.300 43.478 5.11 0.00 0.00 1.28
1967 3805 4.676018 GTCGTCGTCCTCAAGAATAATAGC 59.324 45.833 0.00 0.00 0.00 2.97
1968 3806 4.337274 TCGTCGTCCTCAAGAATAATAGCA 59.663 41.667 0.00 0.00 0.00 3.49
1992 3830 1.452108 GATGGGCTTTGTCGAGGGG 60.452 63.158 0.00 0.00 0.00 4.79
2121 3959 1.205893 CCAGTTGTCAGCTCCTACTCC 59.794 57.143 0.00 0.00 0.00 3.85
2190 4028 4.573900 ACTTCAATGGTGAGTCAGATGAC 58.426 43.478 4.77 4.77 45.08 3.06
2325 4163 3.197766 TGGCGATCAGGTTAGAATTCTGT 59.802 43.478 18.47 0.00 0.00 3.41
2328 4166 4.870426 GCGATCAGGTTAGAATTCTGTTCA 59.130 41.667 18.47 0.00 31.31 3.18
2335 4173 7.884877 TCAGGTTAGAATTCTGTTCACAATCAT 59.115 33.333 18.47 0.00 0.00 2.45
2386 4224 6.151817 GGAAAAGCATCCAATTAGTTCAGTCT 59.848 38.462 0.00 0.00 39.42 3.24
2395 4233 6.884295 TCCAATTAGTTCAGTCTTGTTATGGG 59.116 38.462 0.00 0.00 0.00 4.00
2406 4244 6.586082 CAGTCTTGTTATGGGTTTGTTATTGC 59.414 38.462 0.00 0.00 0.00 3.56
2410 4248 8.861086 TCTTGTTATGGGTTTGTTATTGCTTAA 58.139 29.630 0.00 0.00 0.00 1.85
2420 4258 7.116233 GGTTTGTTATTGCTTAAATGTGTCCTG 59.884 37.037 0.00 0.00 0.00 3.86
2518 4356 4.271533 CGTTTAGGCTTACTGTGTCAACAA 59.728 41.667 0.00 0.00 35.37 2.83
2573 4411 6.100668 GGACTAGTGAGTGCCTAGTTTTTAG 58.899 44.000 0.00 0.00 43.89 1.85
2604 4442 6.764560 AGCAATATTTGGAAATTTGGATCTGC 59.235 34.615 0.00 0.00 0.00 4.26
2622 4460 6.660521 GGATCTGCCCATCATTTGTTATGATA 59.339 38.462 0.00 0.00 36.69 2.15
2628 4466 7.392393 TGCCCATCATTTGTTATGATATCTGAG 59.608 37.037 3.98 0.00 36.69 3.35
2632 4470 9.000486 CATCATTTGTTATGATATCTGAGCTGT 58.000 33.333 3.98 0.00 36.69 4.40
2634 4472 7.989170 TCATTTGTTATGATATCTGAGCTGTGT 59.011 33.333 3.98 0.00 0.00 3.72
2663 4501 6.072175 AGCATCAATTCAAAATGCAATTGCTT 60.072 30.769 29.37 21.33 46.43 3.91
2664 4502 6.250527 GCATCAATTCAAAATGCAATTGCTTC 59.749 34.615 29.37 3.26 44.07 3.86
2665 4503 6.862711 TCAATTCAAAATGCAATTGCTTCA 57.137 29.167 29.37 11.63 39.08 3.02
2733 4602 6.872020 GGAGTACTGACTAGTTGCAAATGTTA 59.128 38.462 10.14 2.16 38.36 2.41
2739 4608 7.878127 ACTGACTAGTTGCAAATGTTACATAGT 59.122 33.333 10.14 2.60 31.66 2.12
2745 4614 8.792830 AGTTGCAAATGTTACATAGTAGTGAT 57.207 30.769 0.00 0.00 0.00 3.06
2791 4682 8.589335 ACAAATTGTACTCGATCGCTATAAAT 57.411 30.769 11.09 4.90 0.00 1.40
2808 4699 7.165812 CGCTATAAATGGCAATAAACAGTGAAC 59.834 37.037 0.00 0.00 33.44 3.18
2824 4715 5.487488 ACAGTGAACATAATTACTCCCTCCA 59.513 40.000 0.00 0.00 0.00 3.86
2863 4754 5.757886 TGTTCTAACTTTTTGCTGAATCGG 58.242 37.500 0.00 0.00 0.00 4.18
2873 4764 7.225538 ACTTTTTGCTGAATCGGATGTAGATAG 59.774 37.037 0.00 0.00 0.00 2.08
2883 4774 8.964476 AATCGGATGTAGATAGACACATTTTT 57.036 30.769 0.00 0.00 35.55 1.94
2926 4819 5.831525 TCAGTCCGTATGTAGTCCATATTGT 59.168 40.000 0.00 0.00 38.29 2.71
2931 4824 9.565213 GTCCGTATGTAGTCCATATTGTAATAC 57.435 37.037 0.00 0.00 38.29 1.89
2932 4825 9.524496 TCCGTATGTAGTCCATATTGTAATACT 57.476 33.333 0.00 0.00 38.29 2.12
2965 4858 6.690194 ACATCTTTTATCTGTGAATGGAGC 57.310 37.500 0.00 0.00 0.00 4.70
3013 4906 7.013083 GTCATCTAAATGATCAGTGGAGCAATT 59.987 37.037 0.09 0.00 43.62 2.32
3023 4916 1.000843 GTGGAGCAATTGGGGTGTTTC 59.999 52.381 7.72 0.00 0.00 2.78
3036 4929 4.019681 TGGGGTGTTTCGTTCTGATTATCT 60.020 41.667 0.00 0.00 0.00 1.98
3039 4932 5.642063 GGGTGTTTCGTTCTGATTATCTCAA 59.358 40.000 0.00 0.00 32.14 3.02
3069 4962 9.717942 ATCTTAGATTACATTCTGTTCTATGGC 57.282 33.333 0.00 0.00 0.00 4.40
3072 4965 5.762218 AGATTACATTCTGTTCTATGGCAGC 59.238 40.000 0.00 0.00 33.09 5.25
3075 4968 3.630769 ACATTCTGTTCTATGGCAGCATG 59.369 43.478 0.00 0.00 40.45 4.06
3083 4976 6.356556 TGTTCTATGGCAGCATGTTATAACT 58.643 36.000 16.33 0.00 39.31 2.24
3146 5039 3.057386 TGCACATTATGGTGAACTTGCTG 60.057 43.478 0.00 0.00 41.32 4.41
3178 5071 5.699001 TGCTAGCGTGTATTACAAATATGGG 59.301 40.000 10.77 0.00 0.00 4.00
3202 5095 2.094675 GCCTTGCTATGGAAAGCTCAA 58.905 47.619 0.00 0.00 43.19 3.02
3258 5151 1.398390 GGGTACAATCAGCAAAGCTCG 59.602 52.381 0.00 0.00 36.40 5.03
3259 5152 2.076863 GGTACAATCAGCAAAGCTCGT 58.923 47.619 0.00 0.00 36.40 4.18
3261 5154 3.062234 GGTACAATCAGCAAAGCTCGTAC 59.938 47.826 0.00 0.00 36.40 3.67
3316 5209 8.690884 CCCCTAGACAGTCACATATAAGATATG 58.309 40.741 2.66 5.16 0.00 1.78
3380 5273 5.536161 TCACAAGCTTTTCTTTCCTGCTAAT 59.464 36.000 0.00 0.00 33.28 1.73
3421 5314 6.207417 ACTGCTAATCAATAATGTACCCATGC 59.793 38.462 0.00 0.00 0.00 4.06
3422 5315 6.067350 TGCTAATCAATAATGTACCCATGCA 58.933 36.000 0.00 0.00 0.00 3.96
3443 5336 5.229423 GCATTTGCAAACTAAATGGTCTCA 58.771 37.500 15.41 0.00 42.76 3.27
3446 5339 7.545265 GCATTTGCAAACTAAATGGTCTCATAA 59.455 33.333 15.41 0.00 42.76 1.90
3449 5342 5.652014 TGCAAACTAAATGGTCTCATAAGGG 59.348 40.000 0.00 0.00 32.44 3.95
3450 5343 5.067805 GCAAACTAAATGGTCTCATAAGGGG 59.932 44.000 0.00 0.00 32.44 4.79
3456 5349 1.709994 GGTCTCATAAGGGGCCTGGG 61.710 65.000 0.84 0.00 0.00 4.45
3485 5378 3.939066 ACCGTTTGGACTTATCTCTTGG 58.061 45.455 0.00 0.00 39.21 3.61
3495 5388 6.156775 TGGACTTATCTCTTGGATTGTCATCA 59.843 38.462 0.00 0.00 37.88 3.07
3536 5429 5.406767 TGTCAAATTGTTTTGCTCATTGC 57.593 34.783 0.00 0.00 41.66 3.56
3560 5453 5.312895 TGTTACATATGGTGCAAGTCAAGT 58.687 37.500 7.80 0.00 0.00 3.16
3603 5496 6.250344 TGATCTCACAGAAAGCAGAAAATG 57.750 37.500 0.00 0.00 0.00 2.32
3646 5539 7.814107 AGCTTGTTTATGTGTTGTCCATATTTG 59.186 33.333 0.00 0.00 0.00 2.32
3668 5561 0.179129 GCTTGTGTATGGTGCCATGC 60.179 55.000 13.57 12.52 39.07 4.06
3681 5574 0.667993 GCCATGCGCCAGCTATTTTA 59.332 50.000 4.18 0.00 45.42 1.52
3684 5577 3.799917 GCCATGCGCCAGCTATTTTATTT 60.800 43.478 4.18 0.00 45.42 1.40
3781 5674 2.516906 TCACTGGCTTCATTCATTGCA 58.483 42.857 0.00 0.00 0.00 4.08
3805 5698 6.313905 CACTTGTATTTAGCTGTCTAACCAGG 59.686 42.308 0.00 0.00 34.71 4.45
3806 5699 6.013639 ACTTGTATTTAGCTGTCTAACCAGGT 60.014 38.462 0.00 0.00 44.75 4.00
3811 5704 5.656213 TTAGCTGTCTAACCAGGTTACTC 57.344 43.478 8.09 5.21 42.73 2.59
3830 5725 5.640189 ACTCGTGTGTGCTAACTTATACT 57.360 39.130 0.00 0.00 0.00 2.12
3912 5809 9.725019 ATGTAATGTGAGTATTTCTTGTCTCAA 57.275 29.630 0.00 0.00 38.40 3.02
4071 5982 6.367969 CACAAACAGTCCACCACTAGTATAAC 59.632 42.308 0.00 0.00 32.21 1.89
4124 6039 7.863722 TCCTGCCATGGTTTAACTTTATACTA 58.136 34.615 14.67 0.00 0.00 1.82
4175 6090 2.677914 TGGCGAAGATCAGGAGGATAA 58.322 47.619 0.00 0.00 36.00 1.75
4355 6271 6.615264 AAAGAGAAAAAGGTAGTTTCCGTC 57.385 37.500 0.00 0.00 35.92 4.79
4363 6279 2.007608 GGTAGTTTCCGTCATCTTGGC 58.992 52.381 0.00 0.00 0.00 4.52
4491 10658 6.055588 GGAGCATTTACCTAACTGCATTCTA 58.944 40.000 9.33 0.00 42.24 2.10
4678 10850 2.985456 GAGGACTCCCTGCACCTG 59.015 66.667 0.00 0.00 44.53 4.00
4679 10851 2.608988 AGGACTCCCTGCACCTGG 60.609 66.667 0.00 0.00 42.42 4.45
4680 10852 4.416738 GGACTCCCTGCACCTGGC 62.417 72.222 0.00 0.00 45.13 4.85
4681 10853 3.325753 GACTCCCTGCACCTGGCT 61.326 66.667 0.00 0.00 45.15 4.75
4722 10898 5.475909 TCCTCCATTATGTAGACCGTGTATC 59.524 44.000 0.00 0.00 0.00 2.24
4730 10907 4.958509 TGTAGACCGTGTATCAAAACCAA 58.041 39.130 0.00 0.00 0.00 3.67
4821 11080 7.824704 ATCTCGCATGAATCTAATGATGTAC 57.175 36.000 0.00 0.00 32.44 2.90
4824 11083 6.159293 TCGCATGAATCTAATGATGTACTCC 58.841 40.000 0.00 0.00 32.44 3.85
4825 11084 5.349817 CGCATGAATCTAATGATGTACTCCC 59.650 44.000 0.00 0.00 32.44 4.30
4826 11085 6.471146 GCATGAATCTAATGATGTACTCCCT 58.529 40.000 0.00 0.00 32.44 4.20
4827 11086 6.593382 GCATGAATCTAATGATGTACTCCCTC 59.407 42.308 0.00 0.00 32.44 4.30
4828 11087 7.526860 GCATGAATCTAATGATGTACTCCCTCT 60.527 40.741 0.00 0.00 32.44 3.69
4829 11088 7.295322 TGAATCTAATGATGTACTCCCTCTG 57.705 40.000 0.00 0.00 32.44 3.35
4830 11089 6.841229 TGAATCTAATGATGTACTCCCTCTGT 59.159 38.462 0.00 0.00 32.44 3.41
4831 11090 8.004801 TGAATCTAATGATGTACTCCCTCTGTA 58.995 37.037 0.00 0.00 32.44 2.74
4832 11091 8.783660 AATCTAATGATGTACTCCCTCTGTAA 57.216 34.615 0.00 0.00 32.44 2.41
4833 11092 8.783660 ATCTAATGATGTACTCCCTCTGTAAA 57.216 34.615 0.00 0.00 0.00 2.01
4834 11093 8.008513 TCTAATGATGTACTCCCTCTGTAAAC 57.991 38.462 0.00 0.00 0.00 2.01
4835 11094 6.620877 AATGATGTACTCCCTCTGTAAACA 57.379 37.500 0.00 0.00 0.00 2.83
4836 11095 6.620877 ATGATGTACTCCCTCTGTAAACAA 57.379 37.500 0.00 0.00 0.00 2.83
4838 11097 7.016153 TGATGTACTCCCTCTGTAAACAAAT 57.984 36.000 0.00 0.00 0.00 2.32
4839 11098 8.141298 TGATGTACTCCCTCTGTAAACAAATA 57.859 34.615 0.00 0.00 0.00 1.40
4840 11099 8.768397 TGATGTACTCCCTCTGTAAACAAATAT 58.232 33.333 0.00 0.00 0.00 1.28
4848 11107 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
4850 11109 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
4866 11125 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
4890 11149 8.804688 GTGATCTACACGCTCTTATATTTCTT 57.195 34.615 0.00 0.00 39.78 2.52
4891 11150 9.250624 GTGATCTACACGCTCTTATATTTCTTT 57.749 33.333 0.00 0.00 39.78 2.52
4895 11154 9.731819 TCTACACGCTCTTATATTTCTTTACAG 57.268 33.333 0.00 0.00 0.00 2.74
4896 11155 9.731819 CTACACGCTCTTATATTTCTTTACAGA 57.268 33.333 0.00 0.00 0.00 3.41
4900 11159 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
5031 11291 4.021229 TGACTCGGCTTACAGATTTCCTA 58.979 43.478 0.00 0.00 0.00 2.94
5032 11292 4.464951 TGACTCGGCTTACAGATTTCCTAA 59.535 41.667 0.00 0.00 0.00 2.69
5033 11293 5.046878 TGACTCGGCTTACAGATTTCCTAAA 60.047 40.000 0.00 0.00 0.00 1.85
5034 11294 5.801380 ACTCGGCTTACAGATTTCCTAAAA 58.199 37.500 0.00 0.00 0.00 1.52
5035 11295 6.415573 ACTCGGCTTACAGATTTCCTAAAAT 58.584 36.000 0.00 0.00 37.80 1.82
5036 11296 6.316390 ACTCGGCTTACAGATTTCCTAAAATG 59.684 38.462 0.00 0.00 35.21 2.32
5039 11299 6.564328 GGCTTACAGATTTCCTAAAATGGTG 58.436 40.000 0.00 0.00 35.21 4.17
5041 11301 4.701956 ACAGATTTCCTAAAATGGTGCG 57.298 40.909 0.00 0.00 35.21 5.34
5042 11302 4.079253 ACAGATTTCCTAAAATGGTGCGT 58.921 39.130 0.00 0.00 35.21 5.24
5043 11303 4.082787 ACAGATTTCCTAAAATGGTGCGTG 60.083 41.667 0.00 0.00 35.21 5.34
5044 11304 2.715737 TTTCCTAAAATGGTGCGTGC 57.284 45.000 0.00 0.00 0.00 5.34
5046 11328 1.164411 TCCTAAAATGGTGCGTGCAG 58.836 50.000 0.00 0.00 0.00 4.41
5061 11343 3.236816 CGTGCAGCAGTTTCCTAAATTG 58.763 45.455 0.00 0.00 0.00 2.32
5068 11350 5.697633 CAGCAGTTTCCTAAATTGTTGCATT 59.302 36.000 0.00 0.00 33.95 3.56
5088 11370 8.652592 TGCATTTCTTTATTTTATTTTTGCGC 57.347 26.923 0.00 0.00 0.00 6.09
5090 11372 8.778640 GCATTTCTTTATTTTATTTTTGCGCAG 58.221 29.630 11.31 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 4.263572 CCGTTGTGCCACAGGGGA 62.264 66.667 9.87 0.00 40.01 4.81
78 79 4.263572 TCCGTTGTGCCACAGGGG 62.264 66.667 14.65 12.08 40.85 4.79
79 80 2.958578 AAGTCCGTTGTGCCACAGGG 62.959 60.000 9.94 9.94 37.18 4.45
80 81 1.507141 GAAGTCCGTTGTGCCACAGG 61.507 60.000 0.00 0.00 0.00 4.00
81 82 0.532862 AGAAGTCCGTTGTGCCACAG 60.533 55.000 0.00 0.00 0.00 3.66
82 83 0.107410 AAGAAGTCCGTTGTGCCACA 60.107 50.000 0.00 0.00 0.00 4.17
83 84 0.586802 GAAGAAGTCCGTTGTGCCAC 59.413 55.000 0.00 0.00 0.00 5.01
84 85 0.534203 GGAAGAAGTCCGTTGTGCCA 60.534 55.000 0.00 0.00 36.40 4.92
85 86 2.244946 GGAAGAAGTCCGTTGTGCC 58.755 57.895 0.00 0.00 36.40 5.01
96 97 4.715523 TTGCCGCCGGGGAAGAAG 62.716 66.667 21.95 3.45 38.92 2.85
108 109 4.760047 CGTGGAGGGTCCTTGCCG 62.760 72.222 0.00 0.00 37.46 5.69
109 110 3.319198 TCGTGGAGGGTCCTTGCC 61.319 66.667 0.00 0.00 37.46 4.52
110 111 2.047179 GTCGTGGAGGGTCCTTGC 60.047 66.667 0.00 0.00 37.46 4.01
111 112 2.663196 GGTCGTGGAGGGTCCTTG 59.337 66.667 0.00 0.00 37.46 3.61
112 113 2.606826 GGGTCGTGGAGGGTCCTT 60.607 66.667 0.00 0.00 37.46 3.36
118 119 4.530857 GATGGCGGGTCGTGGAGG 62.531 72.222 0.00 0.00 0.00 4.30
119 120 4.873129 CGATGGCGGGTCGTGGAG 62.873 72.222 0.00 0.00 34.56 3.86
136 137 0.594284 CGTATTCCTCCGCTCGGAAC 60.594 60.000 12.42 6.28 44.66 3.62
137 138 1.731700 CGTATTCCTCCGCTCGGAA 59.268 57.895 12.42 0.00 44.66 4.30
138 139 2.842256 GCGTATTCCTCCGCTCGGA 61.842 63.158 10.84 10.84 46.08 4.55
139 140 2.354773 GCGTATTCCTCCGCTCGG 60.355 66.667 1.14 1.14 46.08 4.63
144 145 2.354773 GCTCGGCGTATTCCTCCG 60.355 66.667 6.85 0.00 44.16 4.63
145 146 2.029221 GGCTCGGCGTATTCCTCC 59.971 66.667 6.85 0.00 0.00 4.30
146 147 1.177256 TAGGGCTCGGCGTATTCCTC 61.177 60.000 6.85 0.00 0.00 3.71
147 148 1.152610 TAGGGCTCGGCGTATTCCT 60.153 57.895 6.85 12.29 0.00 3.36
148 149 1.006454 GTAGGGCTCGGCGTATTCC 60.006 63.158 6.85 5.02 0.00 3.01
149 150 1.006454 GGTAGGGCTCGGCGTATTC 60.006 63.158 6.85 0.00 0.00 1.75
150 151 1.759299 TGGTAGGGCTCGGCGTATT 60.759 57.895 6.85 0.00 0.00 1.89
151 152 2.123597 TGGTAGGGCTCGGCGTAT 60.124 61.111 6.85 0.00 0.00 3.06
152 153 3.142838 GTGGTAGGGCTCGGCGTA 61.143 66.667 6.85 0.00 0.00 4.42
156 157 3.384555 TAGGGGTGGTAGGGCTCGG 62.385 68.421 0.00 0.00 0.00 4.63
157 158 1.833049 CTAGGGGTGGTAGGGCTCG 60.833 68.421 0.00 0.00 0.00 5.03
158 159 2.141448 GCTAGGGGTGGTAGGGCTC 61.141 68.421 0.00 0.00 0.00 4.70
159 160 2.040779 GCTAGGGGTGGTAGGGCT 60.041 66.667 0.00 0.00 0.00 5.19
160 161 3.169242 GGCTAGGGGTGGTAGGGC 61.169 72.222 0.00 0.00 0.00 5.19
161 162 2.842936 CGGCTAGGGGTGGTAGGG 60.843 72.222 0.00 0.00 0.00 3.53
162 163 1.382146 TTCGGCTAGGGGTGGTAGG 60.382 63.158 0.00 0.00 0.00 3.18
163 164 1.821258 GTTCGGCTAGGGGTGGTAG 59.179 63.158 0.00 0.00 0.00 3.18
164 165 2.053865 CGTTCGGCTAGGGGTGGTA 61.054 63.158 0.00 0.00 0.00 3.25
165 166 3.387947 CGTTCGGCTAGGGGTGGT 61.388 66.667 0.00 0.00 0.00 4.16
166 167 4.157120 CCGTTCGGCTAGGGGTGG 62.157 72.222 0.00 0.00 0.00 4.61
167 168 3.072468 TCCGTTCGGCTAGGGGTG 61.072 66.667 6.35 0.00 0.00 4.61
168 169 2.758737 CTCCGTTCGGCTAGGGGT 60.759 66.667 6.35 0.00 0.00 4.95
169 170 3.537874 CCTCCGTTCGGCTAGGGG 61.538 72.222 6.35 0.59 0.00 4.79
170 171 1.896122 AAACCTCCGTTCGGCTAGGG 61.896 60.000 18.62 13.81 33.16 3.53
171 172 0.739813 CAAACCTCCGTTCGGCTAGG 60.740 60.000 14.64 14.64 35.14 3.02
172 173 0.739813 CCAAACCTCCGTTCGGCTAG 60.740 60.000 6.35 0.00 0.00 3.42
173 174 1.186917 TCCAAACCTCCGTTCGGCTA 61.187 55.000 6.35 0.00 0.00 3.93
174 175 2.032071 CCAAACCTCCGTTCGGCT 59.968 61.111 6.35 0.00 0.00 5.52
175 176 2.031465 TCCAAACCTCCGTTCGGC 59.969 61.111 6.35 0.00 0.00 5.54
176 177 0.669625 GAGTCCAAACCTCCGTTCGG 60.670 60.000 4.74 4.74 0.00 4.30
177 178 0.669625 GGAGTCCAAACCTCCGTTCG 60.670 60.000 3.60 0.00 39.22 3.95
178 179 3.228499 GGAGTCCAAACCTCCGTTC 57.772 57.895 3.60 0.00 39.22 3.95
182 183 2.046217 GCCGGAGTCCAAACCTCC 60.046 66.667 5.05 0.00 44.24 4.30
183 184 2.240162 ATCGCCGGAGTCCAAACCTC 62.240 60.000 5.05 0.00 0.00 3.85
184 185 2.291043 ATCGCCGGAGTCCAAACCT 61.291 57.895 5.05 0.00 0.00 3.50
185 186 2.106683 CATCGCCGGAGTCCAAACC 61.107 63.158 5.05 0.00 0.00 3.27
186 187 1.079405 TCATCGCCGGAGTCCAAAC 60.079 57.895 5.05 0.00 0.00 2.93
187 188 1.079405 GTCATCGCCGGAGTCCAAA 60.079 57.895 5.05 0.00 0.00 3.28
188 189 2.577059 GTCATCGCCGGAGTCCAA 59.423 61.111 5.05 0.00 0.00 3.53
189 190 3.822192 CGTCATCGCCGGAGTCCA 61.822 66.667 5.05 0.00 0.00 4.02
190 191 3.060020 TTCGTCATCGCCGGAGTCC 62.060 63.158 5.05 0.00 36.96 3.85
191 192 1.872679 GTTCGTCATCGCCGGAGTC 60.873 63.158 5.05 0.00 36.96 3.36
192 193 2.181021 GTTCGTCATCGCCGGAGT 59.819 61.111 5.05 0.00 36.96 3.85
193 194 2.582498 GGTTCGTCATCGCCGGAG 60.582 66.667 5.05 0.00 36.96 4.63
194 195 4.137872 GGGTTCGTCATCGCCGGA 62.138 66.667 5.05 0.00 36.96 5.14
195 196 2.287457 TTAGGGTTCGTCATCGCCGG 62.287 60.000 0.00 0.00 36.96 6.13
196 197 1.140161 TTAGGGTTCGTCATCGCCG 59.860 57.895 0.00 0.00 36.96 6.46
197 198 0.175073 AGTTAGGGTTCGTCATCGCC 59.825 55.000 0.00 0.00 36.96 5.54
198 199 1.278238 CAGTTAGGGTTCGTCATCGC 58.722 55.000 0.00 0.00 36.96 4.58
199 200 1.922570 CCAGTTAGGGTTCGTCATCG 58.077 55.000 0.00 0.00 38.55 3.84
200 201 1.653151 GCCAGTTAGGGTTCGTCATC 58.347 55.000 0.00 0.00 38.09 2.92
201 202 0.108329 CGCCAGTTAGGGTTCGTCAT 60.108 55.000 0.00 0.00 38.09 3.06
202 203 1.290955 CGCCAGTTAGGGTTCGTCA 59.709 57.895 0.00 0.00 38.09 4.35
203 204 1.447314 CCGCCAGTTAGGGTTCGTC 60.447 63.158 0.00 0.00 38.09 4.20
204 205 2.660802 CCGCCAGTTAGGGTTCGT 59.339 61.111 0.00 0.00 38.09 3.85
205 206 2.818274 GCCGCCAGTTAGGGTTCG 60.818 66.667 0.00 0.00 38.09 3.95
206 207 2.038837 GTGCCGCCAGTTAGGGTTC 61.039 63.158 0.00 0.00 38.09 3.62
207 208 2.033602 GTGCCGCCAGTTAGGGTT 59.966 61.111 0.00 0.00 38.09 4.11
208 209 4.388499 CGTGCCGCCAGTTAGGGT 62.388 66.667 0.00 0.00 38.09 4.34
210 211 3.009192 TACCGTGCCGCCAGTTAGG 62.009 63.158 0.00 0.00 41.84 2.69
211 212 1.808390 GTACCGTGCCGCCAGTTAG 60.808 63.158 0.00 0.00 0.00 2.34
212 213 2.262292 GTACCGTGCCGCCAGTTA 59.738 61.111 0.00 0.00 0.00 2.24
219 220 4.388080 TCGTGTCGTACCGTGCCG 62.388 66.667 0.00 0.00 0.00 5.69
220 221 2.802414 GTCGTGTCGTACCGTGCC 60.802 66.667 0.00 0.00 0.00 5.01
221 222 2.839324 ATCGTCGTGTCGTACCGTGC 62.839 60.000 0.00 0.00 0.00 5.34
222 223 0.854853 GATCGTCGTGTCGTACCGTG 60.855 60.000 0.00 0.00 0.00 4.94
223 224 1.421485 GATCGTCGTGTCGTACCGT 59.579 57.895 0.00 0.00 0.00 4.83
224 225 1.646403 CGATCGTCGTGTCGTACCG 60.646 63.158 7.03 0.00 34.72 4.02
225 226 1.931612 GCGATCGTCGTGTCGTACC 60.932 63.158 17.81 0.00 42.81 3.34
226 227 1.225827 TGCGATCGTCGTGTCGTAC 60.226 57.895 17.81 0.00 42.81 3.67
227 228 1.225827 GTGCGATCGTCGTGTCGTA 60.226 57.895 17.81 13.95 42.81 3.43
228 229 1.629345 TAGTGCGATCGTCGTGTCGT 61.629 55.000 17.81 6.97 42.81 4.34
229 230 0.519792 TTAGTGCGATCGTCGTGTCG 60.520 55.000 17.81 15.07 42.81 4.35
230 231 1.578023 CTTTAGTGCGATCGTCGTGTC 59.422 52.381 17.81 0.00 42.81 3.67
231 232 1.198408 TCTTTAGTGCGATCGTCGTGT 59.802 47.619 17.81 0.04 42.81 4.49
232 233 1.578023 GTCTTTAGTGCGATCGTCGTG 59.422 52.381 17.81 1.52 42.81 4.35
233 234 1.198408 TGTCTTTAGTGCGATCGTCGT 59.802 47.619 17.81 3.74 42.81 4.34
234 235 1.578023 GTGTCTTTAGTGCGATCGTCG 59.422 52.381 17.81 0.00 43.89 5.12
235 236 2.594654 CAGTGTCTTTAGTGCGATCGTC 59.405 50.000 17.81 9.69 0.00 4.20
236 237 2.596452 CAGTGTCTTTAGTGCGATCGT 58.404 47.619 17.81 0.00 0.00 3.73
237 238 1.321743 GCAGTGTCTTTAGTGCGATCG 59.678 52.381 11.69 11.69 37.28 3.69
238 239 1.661112 GGCAGTGTCTTTAGTGCGATC 59.339 52.381 0.00 0.00 45.70 3.69
239 240 1.276421 AGGCAGTGTCTTTAGTGCGAT 59.724 47.619 0.00 0.00 45.70 4.58
240 241 0.679505 AGGCAGTGTCTTTAGTGCGA 59.320 50.000 0.00 0.00 45.70 5.10
241 242 1.071605 GAGGCAGTGTCTTTAGTGCG 58.928 55.000 0.00 0.00 45.70 5.34
242 243 1.071605 CGAGGCAGTGTCTTTAGTGC 58.928 55.000 0.00 0.00 44.38 4.40
243 244 2.329379 GACGAGGCAGTGTCTTTAGTG 58.671 52.381 0.00 0.00 32.37 2.74
244 245 1.272769 GGACGAGGCAGTGTCTTTAGT 59.727 52.381 0.00 0.00 35.45 2.24
245 246 1.546476 AGGACGAGGCAGTGTCTTTAG 59.454 52.381 0.00 0.00 35.45 1.85
246 247 1.544691 GAGGACGAGGCAGTGTCTTTA 59.455 52.381 0.00 0.00 35.45 1.85
247 248 0.318762 GAGGACGAGGCAGTGTCTTT 59.681 55.000 0.00 0.00 35.45 2.52
248 249 0.827925 TGAGGACGAGGCAGTGTCTT 60.828 55.000 0.00 0.00 35.45 3.01
249 250 0.827925 TTGAGGACGAGGCAGTGTCT 60.828 55.000 0.00 0.00 35.45 3.41
250 251 0.247736 ATTGAGGACGAGGCAGTGTC 59.752 55.000 0.00 0.00 0.00 3.67
251 252 1.478510 CTATTGAGGACGAGGCAGTGT 59.521 52.381 0.00 0.00 0.00 3.55
252 253 1.804372 GCTATTGAGGACGAGGCAGTG 60.804 57.143 0.00 0.00 0.00 3.66
253 254 0.461961 GCTATTGAGGACGAGGCAGT 59.538 55.000 0.00 0.00 0.00 4.40
254 255 0.596083 CGCTATTGAGGACGAGGCAG 60.596 60.000 0.00 0.00 0.00 4.85
255 256 1.035385 TCGCTATTGAGGACGAGGCA 61.035 55.000 0.00 0.00 0.00 4.75
256 257 0.315568 ATCGCTATTGAGGACGAGGC 59.684 55.000 0.00 0.00 38.04 4.70
257 258 1.400371 CGATCGCTATTGAGGACGAGG 60.400 57.143 0.26 0.00 38.04 4.63
258 259 1.400371 CCGATCGCTATTGAGGACGAG 60.400 57.143 10.32 0.00 38.04 4.18
259 260 0.591659 CCGATCGCTATTGAGGACGA 59.408 55.000 10.32 0.00 39.11 4.20
260 261 0.387367 CCCGATCGCTATTGAGGACG 60.387 60.000 10.32 0.00 0.00 4.79
261 262 0.959553 TCCCGATCGCTATTGAGGAC 59.040 55.000 10.32 0.00 0.00 3.85
262 263 0.959553 GTCCCGATCGCTATTGAGGA 59.040 55.000 10.32 6.24 0.00 3.71
263 264 0.673985 TGTCCCGATCGCTATTGAGG 59.326 55.000 10.32 3.60 0.00 3.86
264 265 1.336332 CCTGTCCCGATCGCTATTGAG 60.336 57.143 10.32 0.05 0.00 3.02
265 266 0.673985 CCTGTCCCGATCGCTATTGA 59.326 55.000 10.32 0.00 0.00 2.57
266 267 0.673985 TCCTGTCCCGATCGCTATTG 59.326 55.000 10.32 0.00 0.00 1.90
267 268 1.546476 GATCCTGTCCCGATCGCTATT 59.454 52.381 10.32 0.00 0.00 1.73
268 269 1.178276 GATCCTGTCCCGATCGCTAT 58.822 55.000 10.32 0.00 0.00 2.97
269 270 0.179001 TGATCCTGTCCCGATCGCTA 60.179 55.000 10.32 0.00 39.23 4.26
270 271 1.043116 TTGATCCTGTCCCGATCGCT 61.043 55.000 10.32 0.00 39.23 4.93
271 272 0.876342 GTTGATCCTGTCCCGATCGC 60.876 60.000 10.32 0.00 39.23 4.58
272 273 0.249489 GGTTGATCCTGTCCCGATCG 60.249 60.000 8.51 8.51 39.23 3.69
273 274 1.123928 AGGTTGATCCTGTCCCGATC 58.876 55.000 0.00 0.00 46.19 3.69
274 275 3.324246 AGGTTGATCCTGTCCCGAT 57.676 52.632 0.00 0.00 46.19 4.18
275 276 4.887957 AGGTTGATCCTGTCCCGA 57.112 55.556 0.00 0.00 46.19 5.14
283 284 1.140312 TATGAGGCCCAGGTTGATCC 58.860 55.000 0.00 0.00 0.00 3.36
284 285 1.202818 GGTATGAGGCCCAGGTTGATC 60.203 57.143 0.00 0.00 0.00 2.92
285 286 0.846693 GGTATGAGGCCCAGGTTGAT 59.153 55.000 0.00 0.00 0.00 2.57
286 287 1.279025 GGGTATGAGGCCCAGGTTGA 61.279 60.000 0.00 0.00 45.40 3.18
287 288 1.227383 GGGTATGAGGCCCAGGTTG 59.773 63.158 0.00 0.00 45.40 3.77
288 289 3.755467 GGGTATGAGGCCCAGGTT 58.245 61.111 0.00 0.00 45.40 3.50
296 297 1.700042 GGGAGTGCCTGGGTATGAGG 61.700 65.000 0.00 0.00 0.00 3.86
297 298 1.832912 GGGAGTGCCTGGGTATGAG 59.167 63.158 0.00 0.00 0.00 2.90
298 299 2.063979 CGGGAGTGCCTGGGTATGA 61.064 63.158 0.00 0.00 36.87 2.15
299 300 2.505982 CGGGAGTGCCTGGGTATG 59.494 66.667 0.00 0.00 36.87 2.39
320 321 4.885270 TGGTGGGCACGGTGGTTG 62.885 66.667 10.60 0.00 0.00 3.77
321 322 4.887190 GTGGTGGGCACGGTGGTT 62.887 66.667 10.60 0.00 0.00 3.67
361 362 0.464916 AACCCGGTGTCGAGCTTTTT 60.465 50.000 0.00 0.00 39.00 1.94
362 363 0.393820 TAACCCGGTGTCGAGCTTTT 59.606 50.000 0.00 0.00 39.00 2.27
363 364 0.037605 CTAACCCGGTGTCGAGCTTT 60.038 55.000 0.00 0.00 39.00 3.51
364 365 1.590147 CTAACCCGGTGTCGAGCTT 59.410 57.895 0.00 0.00 39.00 3.74
365 366 3.003113 GCTAACCCGGTGTCGAGCT 62.003 63.158 16.22 0.00 39.00 4.09
366 367 2.502692 AAGCTAACCCGGTGTCGAGC 62.503 60.000 15.94 15.94 39.00 5.03
367 368 0.736325 CAAGCTAACCCGGTGTCGAG 60.736 60.000 0.00 1.03 39.00 4.04
368 369 1.290955 CAAGCTAACCCGGTGTCGA 59.709 57.895 0.00 0.00 39.00 4.20
369 370 1.740296 CCAAGCTAACCCGGTGTCG 60.740 63.158 0.00 0.00 0.00 4.35
370 371 1.376812 CCCAAGCTAACCCGGTGTC 60.377 63.158 0.00 0.00 0.00 3.67
371 372 2.754375 CCCAAGCTAACCCGGTGT 59.246 61.111 0.00 0.00 0.00 4.16
372 373 2.750237 GCCCAAGCTAACCCGGTG 60.750 66.667 0.00 0.00 35.50 4.94
373 374 4.043100 GGCCCAAGCTAACCCGGT 62.043 66.667 0.00 0.00 39.73 5.28
374 375 3.699134 GAGGCCCAAGCTAACCCGG 62.699 68.421 0.00 0.00 39.73 5.73
375 376 2.124695 GAGGCCCAAGCTAACCCG 60.125 66.667 0.00 0.00 39.73 5.28
376 377 0.843984 TATGAGGCCCAAGCTAACCC 59.156 55.000 0.00 0.00 39.73 4.11
377 378 1.477014 GGTATGAGGCCCAAGCTAACC 60.477 57.143 0.00 0.00 39.73 2.85
378 379 1.477014 GGGTATGAGGCCCAAGCTAAC 60.477 57.143 0.00 0.00 45.40 2.34
379 380 0.843984 GGGTATGAGGCCCAAGCTAA 59.156 55.000 0.00 0.00 45.40 3.09
380 381 2.539983 GGGTATGAGGCCCAAGCTA 58.460 57.895 0.00 0.00 45.40 3.32
381 382 3.335711 GGGTATGAGGCCCAAGCT 58.664 61.111 0.00 0.00 45.40 3.74
386 387 1.351350 GGTTAGATGGGTATGAGGCCC 59.649 57.143 0.00 0.00 46.26 5.80
387 388 1.351350 GGGTTAGATGGGTATGAGGCC 59.649 57.143 0.00 0.00 0.00 5.19
388 389 1.351350 GGGGTTAGATGGGTATGAGGC 59.649 57.143 0.00 0.00 0.00 4.70
389 390 1.623811 CGGGGTTAGATGGGTATGAGG 59.376 57.143 0.00 0.00 0.00 3.86
390 391 2.299297 GTCGGGGTTAGATGGGTATGAG 59.701 54.545 0.00 0.00 0.00 2.90
391 392 2.322658 GTCGGGGTTAGATGGGTATGA 58.677 52.381 0.00 0.00 0.00 2.15
392 393 1.346722 GGTCGGGGTTAGATGGGTATG 59.653 57.143 0.00 0.00 0.00 2.39
393 394 1.725803 GGTCGGGGTTAGATGGGTAT 58.274 55.000 0.00 0.00 0.00 2.73
394 395 0.398948 GGGTCGGGGTTAGATGGGTA 60.399 60.000 0.00 0.00 0.00 3.69
395 396 1.691689 GGGTCGGGGTTAGATGGGT 60.692 63.158 0.00 0.00 0.00 4.51
396 397 1.276140 TTGGGTCGGGGTTAGATGGG 61.276 60.000 0.00 0.00 0.00 4.00
397 398 0.107361 GTTGGGTCGGGGTTAGATGG 60.107 60.000 0.00 0.00 0.00 3.51
398 399 0.107361 GGTTGGGTCGGGGTTAGATG 60.107 60.000 0.00 0.00 0.00 2.90
399 400 0.253020 AGGTTGGGTCGGGGTTAGAT 60.253 55.000 0.00 0.00 0.00 1.98
400 401 1.159184 AGGTTGGGTCGGGGTTAGA 59.841 57.895 0.00 0.00 0.00 2.10
401 402 1.196104 TCAGGTTGGGTCGGGGTTAG 61.196 60.000 0.00 0.00 0.00 2.34
402 403 1.152074 TCAGGTTGGGTCGGGGTTA 60.152 57.895 0.00 0.00 0.00 2.85
403 404 2.448931 TCAGGTTGGGTCGGGGTT 60.449 61.111 0.00 0.00 0.00 4.11
404 405 3.246880 GTCAGGTTGGGTCGGGGT 61.247 66.667 0.00 0.00 0.00 4.95
405 406 2.928396 AGTCAGGTTGGGTCGGGG 60.928 66.667 0.00 0.00 0.00 5.73
406 407 2.663196 GAGTCAGGTTGGGTCGGG 59.337 66.667 0.00 0.00 0.00 5.14
407 408 2.261671 CGAGTCAGGTTGGGTCGG 59.738 66.667 0.00 0.00 0.00 4.79
408 409 2.261671 CCGAGTCAGGTTGGGTCG 59.738 66.667 0.00 0.00 0.00 4.79
409 410 1.292541 GACCGAGTCAGGTTGGGTC 59.707 63.158 7.87 3.05 46.09 4.46
410 411 2.214920 GGACCGAGTCAGGTTGGGT 61.215 63.158 7.87 0.00 46.09 4.51
411 412 2.214216 TGGACCGAGTCAGGTTGGG 61.214 63.158 7.87 0.00 46.09 4.12
412 413 1.004918 GTGGACCGAGTCAGGTTGG 60.005 63.158 7.87 0.00 46.09 3.77
413 414 1.004918 GGTGGACCGAGTCAGGTTG 60.005 63.158 7.87 0.00 46.09 3.77
414 415 1.458777 TGGTGGACCGAGTCAGGTT 60.459 57.895 7.87 0.00 46.09 3.50
416 417 2.973899 CTGGTGGACCGAGTCAGG 59.026 66.667 6.41 0.00 39.43 3.86
417 418 2.099652 TTGCTGGTGGACCGAGTCAG 62.100 60.000 6.41 0.00 39.43 3.51
418 419 2.137528 TTGCTGGTGGACCGAGTCA 61.138 57.895 6.41 0.00 39.43 3.41
419 420 1.668151 GTTGCTGGTGGACCGAGTC 60.668 63.158 0.00 0.00 39.43 3.36
420 421 2.426023 GTTGCTGGTGGACCGAGT 59.574 61.111 0.00 0.00 39.43 4.18
421 422 2.358737 GGTTGCTGGTGGACCGAG 60.359 66.667 0.00 0.00 39.43 4.63
422 423 2.847234 AGGTTGCTGGTGGACCGA 60.847 61.111 0.00 0.00 38.48 4.69
423 424 2.469465 ATCAGGTTGCTGGTGGACCG 62.469 60.000 0.00 0.00 38.48 4.79
424 425 0.678048 GATCAGGTTGCTGGTGGACC 60.678 60.000 0.00 0.00 0.00 4.46
425 426 0.678048 GGATCAGGTTGCTGGTGGAC 60.678 60.000 0.00 0.00 0.00 4.02
426 427 1.685224 GGATCAGGTTGCTGGTGGA 59.315 57.895 0.00 0.00 0.00 4.02
427 428 1.746615 CGGATCAGGTTGCTGGTGG 60.747 63.158 0.00 0.00 0.00 4.61
428 429 1.746615 CCGGATCAGGTTGCTGGTG 60.747 63.158 3.35 0.00 0.00 4.17
429 430 2.671070 CCGGATCAGGTTGCTGGT 59.329 61.111 3.35 0.00 0.00 4.00
430 431 2.825836 GCCGGATCAGGTTGCTGG 60.826 66.667 13.75 0.00 0.00 4.85
431 432 2.825836 GGCCGGATCAGGTTGCTG 60.826 66.667 13.75 0.00 0.00 4.41
432 433 4.115199 GGGCCGGATCAGGTTGCT 62.115 66.667 13.75 0.00 0.00 3.91
434 435 3.740128 CTCGGGCCGGATCAGGTTG 62.740 68.421 27.98 4.05 0.00 3.77
435 436 3.470888 CTCGGGCCGGATCAGGTT 61.471 66.667 27.98 0.00 0.00 3.50
436 437 3.976490 TTCTCGGGCCGGATCAGGT 62.976 63.158 27.98 0.00 0.00 4.00
437 438 3.154473 TTCTCGGGCCGGATCAGG 61.154 66.667 27.98 7.64 0.00 3.86
438 439 2.107141 GTTCTCGGGCCGGATCAG 59.893 66.667 27.98 16.32 0.00 2.90
439 440 2.363795 AGTTCTCGGGCCGGATCA 60.364 61.111 27.98 5.30 0.00 2.92
440 441 2.107141 CAGTTCTCGGGCCGGATC 59.893 66.667 27.98 19.39 0.00 3.36
441 442 4.162690 GCAGTTCTCGGGCCGGAT 62.163 66.667 27.98 5.41 0.00 4.18
447 448 4.069232 TCTGGCGCAGTTCTCGGG 62.069 66.667 10.83 0.00 32.61 5.14
448 449 2.811317 GTCTGGCGCAGTTCTCGG 60.811 66.667 10.83 0.00 32.61 4.63
449 450 3.175240 CGTCTGGCGCAGTTCTCG 61.175 66.667 10.83 1.91 32.61 4.04
464 465 2.267681 GACATCGAGTTCTCGGGCGT 62.268 60.000 19.65 14.40 0.00 5.68
480 481 2.112297 GTTTCCCACCTGCCGACA 59.888 61.111 0.00 0.00 0.00 4.35
499 500 1.300156 CATCATCCATCGTCGCCGT 60.300 57.895 0.00 0.00 35.01 5.68
516 517 3.551496 CTCGCCTTGGCCCTTGTCA 62.551 63.158 0.00 0.00 0.00 3.58
517 518 2.543067 ATCTCGCCTTGGCCCTTGTC 62.543 60.000 0.00 0.00 0.00 3.18
565 566 3.140143 TCAGTTCCTCCCTAGGGTATCT 58.860 50.000 27.58 15.77 43.84 1.98
567 568 3.275228 AGTTCAGTTCCTCCCTAGGGTAT 59.725 47.826 27.58 5.61 43.84 2.73
568 569 2.658489 AGTTCAGTTCCTCCCTAGGGTA 59.342 50.000 27.58 13.21 43.84 3.69
585 586 2.674462 GCTTCGTCCCTAGGAACAGTTC 60.674 54.545 11.48 4.52 31.38 3.01
612 627 1.746991 GGCACAGCTGTAGGGAAGC 60.747 63.158 21.20 17.23 41.15 3.86
663 2485 4.015872 TGGGTTCATCCTCAAGTACAAC 57.984 45.455 0.00 0.00 36.25 3.32
671 2493 6.671605 TGAATAATTGATGGGTTCATCCTCA 58.328 36.000 4.22 0.00 46.92 3.86
679 2501 8.008922 AGATCAAGGATGAATAATTGATGGGTT 58.991 33.333 4.15 0.00 41.27 4.11
683 2505 8.405418 ACCAGATCAAGGATGAATAATTGATG 57.595 34.615 10.82 0.00 41.27 3.07
704 2526 9.840427 ACAATCTCGTTCAAATTAATAAACCAG 57.160 29.630 0.00 0.00 0.00 4.00
744 2566 7.888021 TGAGCCCAATATTTTTCTGTTCTAAGA 59.112 33.333 0.00 0.00 0.00 2.10
748 2570 6.267471 TGTTGAGCCCAATATTTTTCTGTTCT 59.733 34.615 0.00 0.00 34.39 3.01
749 2571 6.454795 TGTTGAGCCCAATATTTTTCTGTTC 58.545 36.000 0.00 0.00 34.39 3.18
852 2684 4.409247 AGGCCATTTCCTAATTCTACGAGT 59.591 41.667 5.01 0.00 33.95 4.18
874 2706 6.482308 TCCTTTTCTTTTCTGAGAACGGTTAG 59.518 38.462 0.00 0.00 35.50 2.34
956 2794 1.003718 GTGGGGAAGACGGAACAGG 60.004 63.158 0.00 0.00 0.00 4.00
957 2795 1.003718 GGTGGGGAAGACGGAACAG 60.004 63.158 0.00 0.00 0.00 3.16
958 2796 2.522367 GGGTGGGGAAGACGGAACA 61.522 63.158 0.00 0.00 0.00 3.18
1081 2919 1.153349 GGAGGCATGAGGGTTCGTC 60.153 63.158 0.00 0.00 0.00 4.20
1082 2920 1.613630 AGGAGGCATGAGGGTTCGT 60.614 57.895 0.00 0.00 0.00 3.85
1191 3029 1.343985 TGCTGGAGGAACCCTAGCATA 60.344 52.381 13.05 0.00 36.31 3.14
1286 3124 2.355986 TAGCCGAGGACGTGCCAAT 61.356 57.895 2.38 0.00 40.02 3.16
1287 3125 2.992689 TAGCCGAGGACGTGCCAA 60.993 61.111 2.38 0.00 40.02 4.52
1511 3349 1.079336 GTTTCCTCGTCGAAGGGGG 60.079 63.158 17.72 7.39 37.02 5.40
1691 3529 0.608640 AGCCAAGTTGTACTCGAGGG 59.391 55.000 18.41 6.55 0.00 4.30
1819 3657 3.877559 TGAACCCATTGTCATCAGCTAG 58.122 45.455 0.00 0.00 0.00 3.42
1820 3658 3.998913 TGAACCCATTGTCATCAGCTA 57.001 42.857 0.00 0.00 0.00 3.32
1831 3669 5.669447 AGAGGTAGAGATGATTGAACCCATT 59.331 40.000 0.00 0.00 0.00 3.16
1838 3676 4.871822 TGACCAGAGGTAGAGATGATTGA 58.128 43.478 0.00 0.00 35.25 2.57
1839 3677 5.453057 CCTTGACCAGAGGTAGAGATGATTG 60.453 48.000 0.00 0.00 35.25 2.67
1906 3744 1.488527 GAATCGCCGAGGTACATGAC 58.511 55.000 0.00 0.00 0.00 3.06
1964 3802 3.696051 GACAAAGCCCATCAGAAATGCTA 59.304 43.478 0.00 0.00 0.00 3.49
1967 3805 2.749076 TCGACAAAGCCCATCAGAAATG 59.251 45.455 0.00 0.00 0.00 2.32
1968 3806 3.012518 CTCGACAAAGCCCATCAGAAAT 58.987 45.455 0.00 0.00 0.00 2.17
2121 3959 0.246635 CTTGAGGTACCCGGAGTGTG 59.753 60.000 8.74 0.00 0.00 3.82
2190 4028 1.608717 CTTCCCACTCCCACTCCTCG 61.609 65.000 0.00 0.00 0.00 4.63
2241 4079 2.204291 TTGATGGCCCTGGACCCT 60.204 61.111 0.00 0.00 0.00 4.34
2395 4233 7.865385 TCAGGACACATTTAAGCAATAACAAAC 59.135 33.333 0.00 0.00 0.00 2.93
2406 4244 8.567948 ACTACAAAACATCAGGACACATTTAAG 58.432 33.333 0.00 0.00 0.00 1.85
2410 4248 6.959639 AACTACAAAACATCAGGACACATT 57.040 33.333 0.00 0.00 0.00 2.71
2420 4258 9.160496 AGATCATCTCTCAAACTACAAAACATC 57.840 33.333 0.00 0.00 0.00 3.06
2518 4356 4.398319 CCAACAAACTCCATCAAGGTAGT 58.602 43.478 0.00 0.00 39.02 2.73
2573 4411 9.598517 TCCAAATTTCCAAATATTGCTATCAAC 57.401 29.630 0.00 0.00 34.60 3.18
2604 4442 7.610692 AGCTCAGATATCATAACAAATGATGGG 59.389 37.037 5.32 0.00 38.98 4.00
2622 4460 3.450096 TGATGCTCTTACACAGCTCAGAT 59.550 43.478 0.00 0.00 37.79 2.90
2628 4466 4.952262 TGAATTGATGCTCTTACACAGC 57.048 40.909 0.00 0.00 37.40 4.40
2632 4470 6.689554 TGCATTTTGAATTGATGCTCTTACA 58.310 32.000 8.73 0.00 44.84 2.41
2634 4472 8.661257 CAATTGCATTTTGAATTGATGCTCTTA 58.339 29.630 8.73 0.00 44.84 2.10
2687 4525 5.211973 TCCAGAGGCATAGACAGATTTACT 58.788 41.667 0.00 0.00 0.00 2.24
2759 4628 7.277981 AGCGATCGAGTACAATTTGTAAGAAAT 59.722 33.333 21.57 3.76 34.21 2.17
2779 4648 7.535258 CACTGTTTATTGCCATTTATAGCGATC 59.465 37.037 0.00 0.00 34.84 3.69
2791 4682 9.019656 AGTAATTATGTTCACTGTTTATTGCCA 57.980 29.630 0.00 0.00 0.00 4.92
2808 4699 7.880160 TTTGTGAATGGAGGGAGTAATTATG 57.120 36.000 0.00 0.00 0.00 1.90
2854 4745 5.157781 GTGTCTATCTACATCCGATTCAGC 58.842 45.833 0.00 0.00 0.00 4.26
2889 4781 4.813296 ACGGACTGAAATGAGTGAAAAC 57.187 40.909 0.00 0.00 0.00 2.43
2938 4831 9.918630 CTCCATTCACAGATAAAAGATGTTTTT 57.081 29.630 5.83 0.00 37.12 1.94
2949 4842 4.645136 AGTACTCGCTCCATTCACAGATAA 59.355 41.667 0.00 0.00 0.00 1.75
2953 4846 2.949451 AGTACTCGCTCCATTCACAG 57.051 50.000 0.00 0.00 0.00 3.66
2960 4853 2.681848 GTGCTAACTAGTACTCGCTCCA 59.318 50.000 0.00 0.00 36.23 3.86
3013 4906 2.649531 AATCAGAACGAAACACCCCA 57.350 45.000 0.00 0.00 0.00 4.96
3069 4962 8.022550 TGTCATTGTTGAAGTTATAACATGCTG 58.977 33.333 17.65 4.57 36.75 4.41
3083 4976 8.352201 CAAAGGAGTAGATTTGTCATTGTTGAA 58.648 33.333 0.00 0.00 32.48 2.69
3146 5039 0.804544 TACACGCTAGCACATTCCGC 60.805 55.000 16.45 0.00 0.00 5.54
3178 5071 0.099436 CTTTCCATAGCAAGGCACGC 59.901 55.000 0.00 0.00 0.00 5.34
3202 5095 2.041620 TGCCAGAGGATTAGTTGCCTTT 59.958 45.455 0.00 0.00 33.84 3.11
3258 5151 8.913656 GGCATAAAGATATACGTTCTTCAGTAC 58.086 37.037 0.00 0.00 32.33 2.73
3259 5152 8.857098 AGGCATAAAGATATACGTTCTTCAGTA 58.143 33.333 0.00 0.00 32.33 2.74
3261 5154 8.594881 AAGGCATAAAGATATACGTTCTTCAG 57.405 34.615 0.00 0.00 32.33 3.02
3397 5290 6.207221 TGCATGGGTACATTATTGATTAGCAG 59.793 38.462 0.00 0.00 34.35 4.24
3421 5314 8.984891 TTATGAGACCATTTAGTTTGCAAATG 57.015 30.769 16.21 8.90 41.16 2.32
3422 5315 8.253113 CCTTATGAGACCATTTAGTTTGCAAAT 58.747 33.333 16.21 7.20 34.31 2.32
3443 5336 1.518431 AACAAGCCCAGGCCCCTTAT 61.518 55.000 4.70 0.00 43.17 1.73
3446 5339 2.167037 TAAACAAGCCCAGGCCCCT 61.167 57.895 4.70 0.00 43.17 4.79
3449 5342 2.340328 CGGTAAACAAGCCCAGGCC 61.340 63.158 4.70 0.00 43.17 5.19
3450 5343 1.176619 AACGGTAAACAAGCCCAGGC 61.177 55.000 0.00 0.00 42.33 4.85
3456 5349 3.703286 AAGTCCAAACGGTAAACAAGC 57.297 42.857 0.00 0.00 0.00 4.01
3485 5378 4.276926 GCCTCCTACCAAATGATGACAATC 59.723 45.833 0.00 0.00 0.00 2.67
3495 5388 3.769300 GACAAAATGGCCTCCTACCAAAT 59.231 43.478 3.32 0.00 41.49 2.32
3536 5429 5.412594 ACTTGACTTGCACCATATGTAACAG 59.587 40.000 1.24 0.00 0.00 3.16
3646 5539 2.052104 GGCACCATACACAAGCCCC 61.052 63.158 0.00 0.00 39.42 5.80
3684 5577 6.039616 GTGTCAAGAGGCACAAACATAAAAA 58.960 36.000 0.00 0.00 35.81 1.94
3691 5584 2.017049 AGTGTGTCAAGAGGCACAAAC 58.983 47.619 4.32 0.00 45.59 2.93
3781 5674 6.013639 ACCTGGTTAGACAGCTAAATACAAGT 60.014 38.462 0.00 0.00 38.28 3.16
3805 5698 7.025963 AGTATAAGTTAGCACACACGAGTAAC 58.974 38.462 0.00 0.00 0.00 2.50
3806 5699 7.149569 AGTATAAGTTAGCACACACGAGTAA 57.850 36.000 0.00 0.00 0.00 2.24
3811 5704 6.583427 TGTTGTAGTATAAGTTAGCACACACG 59.417 38.462 0.00 0.00 0.00 4.49
3830 5725 7.067615 TGCAAAAGGTGAAACTTCTATGTTGTA 59.932 33.333 0.00 0.00 36.74 2.41
3933 5833 6.716628 ACAGTGGCCCATCTAAATATACAATG 59.283 38.462 0.00 0.00 0.00 2.82
3935 5835 6.260700 ACAGTGGCCCATCTAAATATACAA 57.739 37.500 0.00 0.00 0.00 2.41
3951 5859 2.446435 ACCATTGACCAATACAGTGGC 58.554 47.619 0.00 0.00 44.99 5.01
4071 5982 6.981762 AAGCACATTGAACTAGAAGATCAG 57.018 37.500 0.00 0.00 28.63 2.90
4175 6090 2.356535 GCCATCTCATTGTCACCCTTCT 60.357 50.000 0.00 0.00 0.00 2.85
4355 6271 8.562892 CCAGTTAAATTATGAGTAGCCAAGATG 58.437 37.037 0.00 0.00 0.00 2.90
4363 6279 7.336931 ACCAGTTGCCAGTTAAATTATGAGTAG 59.663 37.037 0.00 0.00 0.00 2.57
4491 10658 5.743398 CGATTGACAATTTCATACCGCAAAT 59.257 36.000 1.39 0.00 32.84 2.32
4557 10725 8.431910 TTTAGTACTCCTAAAACCACAGAGAT 57.568 34.615 0.00 0.00 41.55 2.75
4678 10850 0.892814 AGCTCCAAGACAAAGCAGCC 60.893 55.000 0.00 0.00 38.51 4.85
4679 10851 0.957362 AAGCTCCAAGACAAAGCAGC 59.043 50.000 0.00 0.00 38.51 5.25
4680 10852 1.538950 GGAAGCTCCAAGACAAAGCAG 59.461 52.381 0.00 0.00 38.51 4.24
4681 10853 1.143684 AGGAAGCTCCAAGACAAAGCA 59.856 47.619 5.21 0.00 39.61 3.91
4730 10907 1.332195 GAGCCTCCTTGCCACTTTTT 58.668 50.000 0.00 0.00 0.00 1.94
4821 11080 7.169982 CGCTCTTATATTTGTTTACAGAGGGAG 59.830 40.741 4.76 0.00 36.40 4.30
4824 11083 7.772332 ACGCTCTTATATTTGTTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
4832 11091 9.601217 AGTGATCTAAACGCTCTTATATTTGTT 57.399 29.630 0.00 0.00 0.00 2.83
4839 11098 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
4840 11099 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
4841 11100 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
4842 11101 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
4856 11115 5.881443 AGAGCGTGTAGATCACTAAAGTAGT 59.119 40.000 0.00 0.00 44.16 2.73
4859 11118 5.646577 AAGAGCGTGTAGATCACTAAAGT 57.353 39.130 0.00 0.00 44.16 2.66
4860 11119 9.900710 AATATAAGAGCGTGTAGATCACTAAAG 57.099 33.333 0.00 0.00 44.16 1.85
4862 11121 9.894783 GAAATATAAGAGCGTGTAGATCACTAA 57.105 33.333 0.00 0.00 44.16 2.24
4864 11123 8.172352 AGAAATATAAGAGCGTGTAGATCACT 57.828 34.615 0.00 0.00 44.16 3.41
4869 11128 9.731819 CTGTAAAGAAATATAAGAGCGTGTAGA 57.268 33.333 0.00 0.00 0.00 2.59
4871 11130 9.731819 CTCTGTAAAGAAATATAAGAGCGTGTA 57.268 33.333 0.00 0.00 0.00 2.90
4872 11131 7.707035 CCTCTGTAAAGAAATATAAGAGCGTGT 59.293 37.037 0.00 0.00 0.00 4.49
4873 11132 7.169982 CCCTCTGTAAAGAAATATAAGAGCGTG 59.830 40.741 0.00 0.00 0.00 5.34
4874 11133 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
4875 11134 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
4885 11144 9.886132 GTTCATAATACTCCCTCTGTAAAGAAA 57.114 33.333 0.00 0.00 0.00 2.52
4887 11146 8.603898 TGTTCATAATACTCCCTCTGTAAAGA 57.396 34.615 0.00 0.00 0.00 2.52
4888 11147 9.667107 TTTGTTCATAATACTCCCTCTGTAAAG 57.333 33.333 0.00 0.00 0.00 1.85
4889 11148 9.667107 CTTTGTTCATAATACTCCCTCTGTAAA 57.333 33.333 0.00 0.00 0.00 2.01
4890 11149 9.042450 TCTTTGTTCATAATACTCCCTCTGTAA 57.958 33.333 0.00 0.00 0.00 2.41
4891 11150 8.603898 TCTTTGTTCATAATACTCCCTCTGTA 57.396 34.615 0.00 0.00 0.00 2.74
4892 11151 7.496346 TCTTTGTTCATAATACTCCCTCTGT 57.504 36.000 0.00 0.00 0.00 3.41
4895 11154 6.205658 GGCATCTTTGTTCATAATACTCCCTC 59.794 42.308 0.00 0.00 0.00 4.30
4896 11155 6.064717 GGCATCTTTGTTCATAATACTCCCT 58.935 40.000 0.00 0.00 0.00 4.20
4900 11159 5.437060 ACCGGCATCTTTGTTCATAATACT 58.563 37.500 0.00 0.00 0.00 2.12
4906 11165 4.306600 GAAAAACCGGCATCTTTGTTCAT 58.693 39.130 0.00 0.00 0.00 2.57
5031 11291 1.007038 CTGCTGCACGCACCATTTT 60.007 52.632 0.00 0.00 45.47 1.82
5032 11292 1.737355 AACTGCTGCACGCACCATTT 61.737 50.000 0.00 0.00 45.47 2.32
5033 11293 1.737355 AAACTGCTGCACGCACCATT 61.737 50.000 0.00 0.94 45.47 3.16
5034 11294 2.133742 GAAACTGCTGCACGCACCAT 62.134 55.000 0.00 0.00 45.47 3.55
5035 11295 2.828095 AAACTGCTGCACGCACCA 60.828 55.556 0.00 0.00 45.47 4.17
5036 11296 2.050985 GAAACTGCTGCACGCACC 60.051 61.111 0.00 0.00 45.47 5.01
5039 11299 0.591170 TTTAGGAAACTGCTGCACGC 59.409 50.000 0.00 1.70 43.88 5.34
5041 11301 4.243007 ACAATTTAGGAAACTGCTGCAC 57.757 40.909 0.00 0.00 43.88 4.57
5042 11302 4.619973 CAACAATTTAGGAAACTGCTGCA 58.380 39.130 0.88 0.88 43.88 4.41
5043 11303 3.429881 GCAACAATTTAGGAAACTGCTGC 59.570 43.478 0.00 0.00 43.88 5.25
5044 11304 4.619973 TGCAACAATTTAGGAAACTGCTG 58.380 39.130 0.00 0.00 43.88 4.41
5046 11328 6.424812 AGAAATGCAACAATTTAGGAAACTGC 59.575 34.615 0.00 0.00 43.88 4.40
5068 11350 7.728895 GCTCTGCGCAAAAATAAAATAAAGAA 58.271 30.769 13.05 0.00 38.92 2.52
5085 11367 5.973565 ACAAATATAAAGAAATGCTCTGCGC 59.026 36.000 0.00 0.00 33.37 6.09
5086 11368 6.075205 GCACAAATATAAAGAAATGCTCTGCG 60.075 38.462 0.00 0.00 33.37 5.18
5087 11369 6.075205 CGCACAAATATAAAGAAATGCTCTGC 60.075 38.462 0.00 0.00 33.37 4.26
5088 11370 6.968904 ACGCACAAATATAAAGAAATGCTCTG 59.031 34.615 0.00 0.00 33.37 3.35
5090 11372 6.291269 GCACGCACAAATATAAAGAAATGCTC 60.291 38.462 0.00 0.00 0.00 4.26
5092 11374 5.288232 TGCACGCACAAATATAAAGAAATGC 59.712 36.000 0.00 0.00 0.00 3.56
5093 11375 6.506827 GCTGCACGCACAAATATAAAGAAATG 60.507 38.462 0.00 0.00 38.92 2.32
5094 11376 5.516339 GCTGCACGCACAAATATAAAGAAAT 59.484 36.000 0.00 0.00 38.92 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.