Multiple sequence alignment - TraesCS1B01G130200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G130200 chr1B 100.000 7173 0 0 1 7173 161203143 161210315 0.000000e+00 13247.0
1 TraesCS1B01G130200 chr1B 95.181 166 8 0 3774 3939 503670144 503669979 5.520000e-66 263.0
2 TraesCS1B01G130200 chr1B 89.950 199 15 2 1350 1544 374320746 374320943 1.190000e-62 252.0
3 TraesCS1B01G130200 chr1B 95.489 133 6 0 1348 1480 357015879 357015747 5.640000e-51 213.0
4 TraesCS1B01G130200 chr1B 84.127 126 16 4 4139 4262 120640443 120640566 1.260000e-22 119.0
5 TraesCS1B01G130200 chr1B 95.238 42 2 0 5724 5765 161208832 161208873 4.640000e-07 67.6
6 TraesCS1B01G130200 chr1B 95.238 42 2 0 5690 5731 161208866 161208907 4.640000e-07 67.6
7 TraesCS1B01G130200 chr1B 97.143 35 0 1 6514 6548 415738335 415738302 2.790000e-04 58.4
8 TraesCS1B01G130200 chr1B 97.059 34 1 0 6514 6547 415738354 415738387 2.790000e-04 58.4
9 TraesCS1B01G130200 chr1A 93.586 1715 89 10 1630 3332 107102770 107104475 0.000000e+00 2538.0
10 TraesCS1B01G130200 chr1A 92.845 1747 56 27 4790 6498 107105247 107106962 0.000000e+00 2470.0
11 TraesCS1B01G130200 chr1A 94.867 1013 45 5 367 1376 107101581 107102589 0.000000e+00 1576.0
12 TraesCS1B01G130200 chr1A 95.161 558 19 5 6616 7173 107107322 107107871 0.000000e+00 874.0
13 TraesCS1B01G130200 chr1A 95.808 334 11 1 5806 6136 107106284 107106617 2.940000e-148 536.0
14 TraesCS1B01G130200 chr1A 92.412 369 21 3 1 368 107101181 107101543 2.970000e-143 520.0
15 TraesCS1B01G130200 chr1A 90.549 328 24 5 3449 3776 107104648 107104968 1.850000e-115 427.0
16 TraesCS1B01G130200 chr1A 87.584 298 19 5 3935 4226 107104967 107105252 5.360000e-86 329.0
17 TraesCS1B01G130200 chr1A 93.717 191 10 1 1356 1544 67828014 67827824 1.180000e-72 285.0
18 TraesCS1B01G130200 chr1A 95.706 163 7 0 3775 3937 254349076 254348914 5.520000e-66 263.0
19 TraesCS1B01G130200 chr1A 91.124 169 5 3 1425 1583 107102597 107102765 3.370000e-53 220.0
20 TraesCS1B01G130200 chr1A 88.235 68 8 0 5664 5731 107106051 107106118 1.660000e-11 82.4
21 TraesCS1B01G130200 chr1A 95.238 42 2 0 5724 5765 107106167 107106208 4.640000e-07 67.6
22 TraesCS1B01G130200 chr1D 93.287 1713 94 10 1630 3329 106242651 106240947 0.000000e+00 2507.0
23 TraesCS1B01G130200 chr1D 93.806 1227 57 10 374 1583 106243880 106242656 0.000000e+00 1827.0
24 TraesCS1B01G130200 chr1D 92.864 1051 33 14 4705 5731 106240007 106238975 0.000000e+00 1487.0
25 TraesCS1B01G130200 chr1D 92.222 900 43 14 5730 6613 106239010 106238122 0.000000e+00 1249.0
26 TraesCS1B01G130200 chr1D 94.821 560 15 5 6614 7173 106238062 106237517 0.000000e+00 861.0
27 TraesCS1B01G130200 chr1D 93.817 372 19 3 1 368 106244295 106243924 2.260000e-154 556.0
28 TraesCS1B01G130200 chr1D 91.129 372 25 6 3406 3776 106240749 106240385 1.390000e-136 497.0
29 TraesCS1B01G130200 chr1D 93.814 194 10 1 1353 1544 139539160 139539353 2.530000e-74 291.0
30 TraesCS1B01G130200 chr1D 85.581 215 14 8 3935 4144 106240386 106240184 7.290000e-50 209.0
31 TraesCS1B01G130200 chr1D 94.161 137 5 2 1336 1472 253376020 253376153 9.430000e-49 206.0
32 TraesCS1B01G130200 chr1D 96.970 99 3 0 4128 4226 106240037 106239939 4.450000e-37 167.0
33 TraesCS1B01G130200 chr1D 97.143 70 2 0 1475 1544 37513055 37512986 1.260000e-22 119.0
34 TraesCS1B01G130200 chr1D 97.143 70 2 0 1475 1544 62126992 62127061 1.260000e-22 119.0
35 TraesCS1B01G130200 chr1D 85.321 109 11 4 1475 1583 183029997 183030100 2.740000e-19 108.0
36 TraesCS1B01G130200 chr1D 88.235 68 8 0 5664 5731 106239129 106239062 1.660000e-11 82.4
37 TraesCS1B01G130200 chr5B 93.321 554 35 2 4226 4778 296971813 296971261 0.000000e+00 817.0
38 TraesCS1B01G130200 chr5B 77.285 383 62 12 2951 3330 686539092 686539452 1.220000e-47 202.0
39 TraesCS1B01G130200 chr5B 92.308 52 1 3 6502 6553 569149343 569149391 3.590000e-08 71.3
40 TraesCS1B01G130200 chr5B 92.308 52 1 3 6502 6553 569250557 569250605 3.590000e-08 71.3
41 TraesCS1B01G130200 chr5B 97.143 35 0 1 6513 6547 527601800 527601767 2.790000e-04 58.4
42 TraesCS1B01G130200 chr2D 93.073 563 31 8 4217 4777 29708602 29708046 0.000000e+00 817.0
43 TraesCS1B01G130200 chr2D 82.019 317 52 4 2929 3243 190629849 190629536 1.530000e-66 265.0
44 TraesCS1B01G130200 chr2D 96.899 129 2 2 1348 1474 136976379 136976507 1.570000e-51 215.0
45 TraesCS1B01G130200 chr2D 92.617 149 7 4 1333 1480 532678103 532677958 2.030000e-50 211.0
46 TraesCS1B01G130200 chr2D 89.011 91 5 4 1475 1561 205215873 205215962 2.740000e-19 108.0
47 TraesCS1B01G130200 chr4A 93.128 553 38 0 4226 4778 730883510 730882958 0.000000e+00 811.0
48 TraesCS1B01G130200 chr4A 93.128 553 37 1 4226 4778 730277138 730276587 0.000000e+00 809.0
49 TraesCS1B01G130200 chr3B 92.718 563 39 2 4217 4778 328461694 328462255 0.000000e+00 811.0
50 TraesCS1B01G130200 chr3B 94.857 175 6 3 3765 3936 103781689 103781863 3.300000e-68 270.0
51 TraesCS1B01G130200 chr3B 85.437 103 10 5 4167 4266 22081231 22081131 1.270000e-17 102.0
52 TraesCS1B01G130200 chr3B 80.000 145 20 9 4128 4266 817250706 817250847 1.650000e-16 99.0
53 TraesCS1B01G130200 chr7B 92.780 554 38 2 4226 4777 318427300 318427853 0.000000e+00 800.0
54 TraesCS1B01G130200 chr7B 92.157 153 9 3 1324 1474 273830969 273831120 5.640000e-51 213.0
55 TraesCS1B01G130200 chr7B 80.153 131 18 8 4139 4266 23319233 23319358 2.760000e-14 91.6
56 TraesCS1B01G130200 chr7B 84.211 95 12 3 4173 4266 639080556 639080464 9.910000e-14 89.8
57 TraesCS1B01G130200 chr4B 92.780 554 39 1 4226 4778 280859366 280858813 0.000000e+00 800.0
58 TraesCS1B01G130200 chr4B 91.146 192 17 0 1353 1544 645076682 645076873 1.980000e-65 261.0
59 TraesCS1B01G130200 chr4B 92.021 188 9 2 1362 1543 73266136 73265949 7.140000e-65 259.0
60 TraesCS1B01G130200 chr4B 98.361 122 2 0 1353 1474 590695439 590695560 1.570000e-51 215.0
61 TraesCS1B01G130200 chr3D 91.840 576 38 5 4215 4784 275624430 275623858 0.000000e+00 795.0
62 TraesCS1B01G130200 chr3D 83.596 317 48 3 2929 3243 281332363 281332049 1.960000e-75 294.0
63 TraesCS1B01G130200 chr3D 82.445 319 51 4 2929 3245 333754178 333753863 2.550000e-69 274.0
64 TraesCS1B01G130200 chr3D 94.706 170 9 0 3770 3939 22093042 22092873 1.530000e-66 265.0
65 TraesCS1B01G130200 chr3D 85.417 144 16 2 2520 2663 333754317 333754179 2.090000e-30 145.0
66 TraesCS1B01G130200 chr3D 84.028 144 18 2 2520 2663 281332502 281332364 4.510000e-27 134.0
67 TraesCS1B01G130200 chr3D 97.143 35 0 1 6513 6547 551242450 551242417 2.790000e-04 58.4
68 TraesCS1B01G130200 chr7D 92.021 564 38 3 4226 4783 87185876 87185314 0.000000e+00 785.0
69 TraesCS1B01G130200 chr7D 98.361 122 2 0 1353 1474 487756487 487756608 1.570000e-51 215.0
70 TraesCS1B01G130200 chr7D 93.571 140 7 2 1342 1480 304184183 304184045 2.620000e-49 207.0
71 TraesCS1B01G130200 chr7D 92.908 141 8 2 1342 1480 318600789 318600649 3.390000e-48 204.0
72 TraesCS1B01G130200 chr7D 77.344 384 61 15 2951 3330 573953937 573954298 3.390000e-48 204.0
73 TraesCS1B01G130200 chr6B 83.210 405 57 8 2911 3312 544894616 544894220 1.900000e-95 361.0
74 TraesCS1B01G130200 chr6B 94.444 144 8 0 1337 1480 143646748 143646605 9.370000e-54 222.0
75 TraesCS1B01G130200 chr6B 96.899 129 4 0 1352 1480 58845697 58845569 4.360000e-52 217.0
76 TraesCS1B01G130200 chr6B 92.857 42 2 1 6513 6554 28165414 28165374 7.770000e-05 60.2
77 TraesCS1B01G130200 chr6B 97.143 35 0 1 6513 6547 400352803 400352770 2.790000e-04 58.4
78 TraesCS1B01G130200 chr6B 97.143 35 0 1 6513 6547 718384623 718384656 2.790000e-04 58.4
79 TraesCS1B01G130200 chr7A 82.759 319 51 3 2929 3245 711604879 711605195 1.520000e-71 281.0
80 TraesCS1B01G130200 chr7A 81.818 319 54 4 2929 3245 693621093 693621409 1.530000e-66 265.0
81 TraesCS1B01G130200 chr7A 84.298 121 14 2 2541 2661 711604761 711604876 5.880000e-21 113.0
82 TraesCS1B01G130200 chr7A 91.228 57 5 0 2517 2573 711604697 711604753 2.150000e-10 78.7
83 TraesCS1B01G130200 chr7A 89.831 59 5 1 2515 2573 693620910 693620967 2.780000e-09 75.0
84 TraesCS1B01G130200 chr7A 97.143 35 1 0 6513 6547 92250198 92250232 7.770000e-05 60.2
85 TraesCS1B01G130200 chr7A 100.000 29 0 0 4197 4225 630334124 630334152 4.000000e-03 54.7
86 TraesCS1B01G130200 chr3A 91.371 197 12 1 1348 1544 134238732 134238541 1.530000e-66 265.0
87 TraesCS1B01G130200 chr5D 95.152 165 8 0 3775 3939 343243326 343243162 1.980000e-65 261.0
88 TraesCS1B01G130200 chr5D 95.890 73 3 0 1475 1547 206103283 206103211 1.260000e-22 119.0
89 TraesCS1B01G130200 chr5D 95.714 70 3 0 1475 1544 110444179 110444248 5.880000e-21 113.0
90 TraesCS1B01G130200 chr5D 97.143 35 0 1 6513 6547 487170868 487170901 2.790000e-04 58.4
91 TraesCS1B01G130200 chr2B 95.152 165 8 0 3775 3939 616962952 616962788 1.980000e-65 261.0
92 TraesCS1B01G130200 chr2B 80.363 331 54 10 2929 3251 745441194 745440867 2.590000e-59 241.0
93 TraesCS1B01G130200 chr2B 78.531 177 26 5 2520 2695 745441756 745441591 9.840000e-19 106.0
94 TraesCS1B01G130200 chr2B 97.222 36 0 1 6512 6547 161464942 161464908 7.770000e-05 60.2
95 TraesCS1B01G130200 chr2A 94.118 170 10 0 3770 3939 668451686 668451517 7.140000e-65 259.0
96 TraesCS1B01G130200 chr2A 94.152 171 8 2 3768 3936 722494949 722495119 7.140000e-65 259.0
97 TraesCS1B01G130200 chr2A 94.611 167 8 1 3770 3936 189020833 189020998 2.570000e-64 257.0
98 TraesCS1B01G130200 chr6A 94.410 161 7 1 1386 1544 9480673 9480833 5.560000e-61 246.0
99 TraesCS1B01G130200 chr6A 76.246 341 56 13 2951 3288 145996112 145995794 2.680000e-34 158.0
100 TraesCS1B01G130200 chr6A 84.397 141 22 0 2520 2660 477168176 477168036 9.700000e-29 139.0
101 TraesCS1B01G130200 chrUn 97.581 124 3 0 1352 1475 29591 29714 5.640000e-51 213.0
102 TraesCS1B01G130200 chrUn 96.124 129 5 0 1352 1480 87050787 87050659 2.030000e-50 211.0
103 TraesCS1B01G130200 chrUn 96.124 129 5 0 1352 1480 419797223 419797095 2.030000e-50 211.0
104 TraesCS1B01G130200 chrUn 96.124 129 5 0 1352 1480 435604262 435604134 2.030000e-50 211.0
105 TraesCS1B01G130200 chrUn 96.094 128 5 0 1353 1480 17585401 17585274 7.290000e-50 209.0
106 TraesCS1B01G130200 chrUn 96.800 125 4 0 1353 1477 27369918 27369794 7.290000e-50 209.0
107 TraesCS1B01G130200 chrUn 96.094 128 5 0 1353 1480 217443068 217442941 7.290000e-50 209.0
108 TraesCS1B01G130200 chrUn 96.094 128 5 0 1353 1480 217449865 217449738 7.290000e-50 209.0
109 TraesCS1B01G130200 chrUn 97.541 122 3 0 1353 1474 442546698 442546819 7.290000e-50 209.0
110 TraesCS1B01G130200 chrUn 97.059 68 2 0 1475 1542 682338 682271 1.640000e-21 115.0
111 TraesCS1B01G130200 chrUn 97.059 68 2 0 1475 1542 243044961 243044894 1.640000e-21 115.0
112 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 1035771 1035702 5.880000e-21 113.0
113 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 17582177 17582108 5.880000e-21 113.0
114 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 42332058 42331989 5.880000e-21 113.0
115 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 70285917 70285848 5.880000e-21 113.0
116 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 86972363 86972294 5.880000e-21 113.0
117 TraesCS1B01G130200 chrUn 94.521 73 4 0 1475 1547 100782308 100782236 5.880000e-21 113.0
118 TraesCS1B01G130200 chrUn 95.714 70 3 0 1475 1544 119818237 119818306 5.880000e-21 113.0
119 TraesCS1B01G130200 chr4D 97.561 123 3 0 1352 1474 83143559 83143681 2.030000e-50 211.0
120 TraesCS1B01G130200 chr4D 95.385 130 4 1 1345 1474 491729184 491729311 9.430000e-49 206.0
121 TraesCS1B01G130200 chr4D 95.775 71 3 0 1474 1544 323561183 323561113 1.640000e-21 115.0
122 TraesCS1B01G130200 chr4D 80.556 108 12 7 4160 4262 20231190 20231293 2.780000e-09 75.0
123 TraesCS1B01G130200 chr6D 96.094 128 5 0 1353 1480 65055867 65055994 7.290000e-50 209.0
124 TraesCS1B01G130200 chr6D 97.143 70 2 0 1475 1544 101267416 101267347 1.260000e-22 119.0
125 TraesCS1B01G130200 chr6D 94.595 74 3 1 1475 1547 106030295 106030368 5.880000e-21 113.0
126 TraesCS1B01G130200 chr6D 95.714 70 3 0 1475 1544 158356707 158356776 5.880000e-21 113.0
127 TraesCS1B01G130200 chr6D 94.521 73 4 0 1472 1544 221857792 221857720 5.880000e-21 113.0
128 TraesCS1B01G130200 chr6D 94.595 74 3 1 1475 1548 401143239 401143167 5.880000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G130200 chr1B 161203143 161210315 7172 False 4460.733333 13247 96.825333 1 7173 3 chr1B.!!$F4 7172
1 TraesCS1B01G130200 chr1A 107101181 107107871 6690 False 876.363636 2538 92.491727 1 7173 11 chr1A.!!$F1 7172
2 TraesCS1B01G130200 chr1D 106237517 106244295 6778 True 944.240000 2507 92.273200 1 7173 10 chr1D.!!$R2 7172
3 TraesCS1B01G130200 chr5B 296971261 296971813 552 True 817.000000 817 93.321000 4226 4778 1 chr5B.!!$R1 552
4 TraesCS1B01G130200 chr2D 29708046 29708602 556 True 817.000000 817 93.073000 4217 4777 1 chr2D.!!$R1 560
5 TraesCS1B01G130200 chr4A 730882958 730883510 552 True 811.000000 811 93.128000 4226 4778 1 chr4A.!!$R2 552
6 TraesCS1B01G130200 chr4A 730276587 730277138 551 True 809.000000 809 93.128000 4226 4778 1 chr4A.!!$R1 552
7 TraesCS1B01G130200 chr3B 328461694 328462255 561 False 811.000000 811 92.718000 4217 4778 1 chr3B.!!$F2 561
8 TraesCS1B01G130200 chr7B 318427300 318427853 553 False 800.000000 800 92.780000 4226 4777 1 chr7B.!!$F3 551
9 TraesCS1B01G130200 chr4B 280858813 280859366 553 True 800.000000 800 92.780000 4226 4778 1 chr4B.!!$R2 552
10 TraesCS1B01G130200 chr3D 275623858 275624430 572 True 795.000000 795 91.840000 4215 4784 1 chr3D.!!$R2 569
11 TraesCS1B01G130200 chr7D 87185314 87185876 562 True 785.000000 785 92.021000 4226 4783 1 chr7D.!!$R1 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 1.810755 TCTGTGAGTGCGTAATCTCGT 59.189 47.619 2.07 0.00 33.88 4.18 F
79 81 1.816370 CTCGTTTCTCGGATCTCGTG 58.184 55.000 0.00 0.00 40.32 4.35 F
615 659 2.378208 TGCATATTTAGGCATGCCCCTA 59.622 45.455 33.14 17.33 45.59 3.53 F
1386 1437 0.177373 GTCTCAACATACCCGGTCCC 59.823 60.000 0.00 0.00 0.00 4.46 F
1581 1643 0.179048 CTCGGCATTGATGTGGCCTA 60.179 55.000 3.32 0.00 45.53 3.93 F
3228 3301 0.105709 TGATGGAGCTGGACCGGATA 60.106 55.000 9.46 0.00 0.00 2.59 F
3583 3819 0.255890 ATAGGAGTGGCGTGGCATTT 59.744 50.000 0.00 0.00 0.00 2.32 F
3685 3921 0.320374 TGCACCGGTCCACTCTTTAG 59.680 55.000 2.59 0.00 0.00 1.85 F
4206 4611 1.131126 CACATGACGGACCAAGAATGC 59.869 52.381 0.00 0.00 0.00 3.56 F
5956 6402 0.182061 ATGATCGAGCTGTTGGCCAT 59.818 50.000 6.09 0.00 43.05 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1386 1437 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01 R
1387 1438 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35 R
2534 2599 0.179234 TTCTCCCGTTGCAACTCACA 59.821 50.000 26.09 7.50 0.00 3.58 R
3082 3155 0.035881 AGCATCATGGATGGCTACGG 59.964 55.000 8.18 0.00 40.10 4.02 R
3565 3801 0.037590 AAAATGCCACGCCACTCCTA 59.962 50.000 0.00 0.00 0.00 2.94 R
4929 5362 0.107848 CCACGCGGGGTCTAGAAAAT 60.108 55.000 22.33 0.00 0.00 1.82 R
5077 5510 0.779997 ATGGCCCTTTTCTCCACAGT 59.220 50.000 0.00 0.00 31.94 3.55 R
5186 5619 6.544038 AAAGCTAAAAATCAAATGTGCACC 57.456 33.333 15.69 0.00 0.00 5.01 R
6138 6611 0.038744 AGGGCTCATTCTGTTGGTGG 59.961 55.000 0.00 0.00 0.00 4.61 R
7117 7857 0.039437 GGTCGAGAAGTGTCTTGCGA 60.039 55.000 0.00 0.00 35.46 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.810755 TCTGTGAGTGCGTAATCTCGT 59.189 47.619 2.07 0.00 33.88 4.18
23 24 2.159558 TCTGTGAGTGCGTAATCTCGTC 60.160 50.000 2.07 0.00 33.88 4.20
79 81 1.816370 CTCGTTTCTCGGATCTCGTG 58.184 55.000 0.00 0.00 40.32 4.35
253 255 5.076873 CCTTCCACCTTTTCATTTGGTAGA 58.923 41.667 0.00 0.00 30.19 2.59
269 271 8.792633 CATTTGGTAGACTTTTGATAGGTTTGA 58.207 33.333 0.00 0.00 0.00 2.69
271 273 6.472887 TGGTAGACTTTTGATAGGTTTGAGG 58.527 40.000 0.00 0.00 0.00 3.86
357 359 6.064060 TCTCAGTGTTCATCTCAAACCAAAT 58.936 36.000 0.00 0.00 0.00 2.32
360 362 7.202526 TCAGTGTTCATCTCAAACCAAATTTC 58.797 34.615 0.00 0.00 0.00 2.17
403 447 6.866480 TGGGAAGCATAATTTGATCTTCAAC 58.134 36.000 0.00 0.00 35.89 3.18
429 473 8.239998 CAGGAATTAATTCTGTGTTCTCCTTTC 58.760 37.037 23.85 5.86 37.00 2.62
534 578 7.585573 GCATAGAAGCGTCTTAATTTCTGAATG 59.414 37.037 7.67 2.65 35.12 2.67
536 580 6.173339 AGAAGCGTCTTAATTTCTGAATGGA 58.827 36.000 0.00 0.00 0.00 3.41
541 585 7.987458 AGCGTCTTAATTTCTGAATGGATAGAA 59.013 33.333 0.00 0.00 0.00 2.10
574 618 3.117926 AGGTAATGATGGTGCAGCATGTA 60.118 43.478 34.35 22.62 39.68 2.29
615 659 2.378208 TGCATATTTAGGCATGCCCCTA 59.622 45.455 33.14 17.33 45.59 3.53
767 813 5.303845 AGCATGAGAGCACATTCTAGTATCA 59.696 40.000 0.00 0.00 36.85 2.15
768 814 6.014413 AGCATGAGAGCACATTCTAGTATCAT 60.014 38.462 0.00 0.00 36.85 2.45
769 815 6.649973 GCATGAGAGCACATTCTAGTATCATT 59.350 38.462 0.00 0.00 0.00 2.57
863 909 5.010933 TCCCTTGCCGTTTGTATTGAAATA 58.989 37.500 0.00 0.00 0.00 1.40
893 939 3.119388 AGCGCCTTACGTGTTAATCACTA 60.119 43.478 2.29 0.00 46.11 2.74
968 1014 6.071447 TGTTCTACAATATTTTGGCTGCATGT 60.071 34.615 0.50 0.00 37.15 3.21
972 1018 5.172934 ACAATATTTTGGCTGCATGTCTTG 58.827 37.500 0.50 0.00 37.15 3.02
974 1020 5.864418 ATATTTTGGCTGCATGTCTTGAT 57.136 34.783 0.50 0.00 0.00 2.57
1243 1291 5.528043 TGTGCACCACTTGATTTAACAAT 57.472 34.783 15.69 0.00 35.11 2.71
1314 1362 7.824289 TGCTCTAATTTGTGCATACTTCTTAGT 59.176 33.333 11.65 0.00 33.97 2.24
1315 1363 8.669243 GCTCTAATTTGTGCATACTTCTTAGTT 58.331 33.333 8.70 0.00 35.78 2.24
1380 1431 3.877508 GCCTATGTTGTCTCAACATACCC 59.122 47.826 22.90 15.77 40.87 3.69
1386 1437 0.177373 GTCTCAACATACCCGGTCCC 59.823 60.000 0.00 0.00 0.00 4.46
1387 1438 0.252330 TCTCAACATACCCGGTCCCA 60.252 55.000 0.00 0.00 0.00 4.37
1388 1439 0.616371 CTCAACATACCCGGTCCCAA 59.384 55.000 0.00 0.00 0.00 4.12
1404 1455 1.077716 CAAGCCCGGGTAAAGGAGG 60.078 63.158 24.63 0.00 0.00 4.30
1511 1562 2.468915 GTTTCACCTCTAGCCTACCCT 58.531 52.381 0.00 0.00 0.00 4.34
1515 1566 1.133450 CACCTCTAGCCTACCCTAGCA 60.133 57.143 0.00 0.00 35.78 3.49
1529 1580 3.332485 ACCCTAGCATGTTTGGGACTAAA 59.668 43.478 30.27 0.00 42.11 1.85
1531 1582 3.947834 CCTAGCATGTTTGGGACTAAAGG 59.052 47.826 2.09 0.00 0.00 3.11
1532 1583 2.171003 AGCATGTTTGGGACTAAAGGC 58.829 47.619 0.00 0.00 0.00 4.35
1576 1638 0.734889 GGTTCCTCGGCATTGATGTG 59.265 55.000 0.00 0.00 0.00 3.21
1579 1641 2.484062 CCTCGGCATTGATGTGGCC 61.484 63.158 0.00 0.00 44.27 5.36
1580 1642 1.452651 CTCGGCATTGATGTGGCCT 60.453 57.895 3.32 0.00 45.53 5.19
1581 1643 0.179048 CTCGGCATTGATGTGGCCTA 60.179 55.000 3.32 0.00 45.53 3.93
1582 1644 0.179048 TCGGCATTGATGTGGCCTAG 60.179 55.000 3.32 0.00 45.53 3.02
1583 1645 1.168407 CGGCATTGATGTGGCCTAGG 61.168 60.000 3.67 3.67 45.53 3.02
1584 1646 0.825010 GGCATTGATGTGGCCTAGGG 60.825 60.000 11.72 0.00 44.32 3.53
1585 1647 0.183492 GCATTGATGTGGCCTAGGGA 59.817 55.000 11.72 0.00 0.00 4.20
1611 1673 3.601443 GTGAAGACCACTACTGCATCT 57.399 47.619 0.00 0.00 42.44 2.90
1612 1674 3.931578 GTGAAGACCACTACTGCATCTT 58.068 45.455 0.00 0.00 42.44 2.40
1613 1675 3.929610 GTGAAGACCACTACTGCATCTTC 59.070 47.826 14.30 14.30 43.62 2.87
1614 1676 3.055819 TGAAGACCACTACTGCATCTTCC 60.056 47.826 17.13 4.79 42.99 3.46
1615 1677 2.826488 AGACCACTACTGCATCTTCCT 58.174 47.619 0.00 0.00 0.00 3.36
1616 1678 2.763448 AGACCACTACTGCATCTTCCTC 59.237 50.000 0.00 0.00 0.00 3.71
1617 1679 2.497675 GACCACTACTGCATCTTCCTCA 59.502 50.000 0.00 0.00 0.00 3.86
1618 1680 2.906389 ACCACTACTGCATCTTCCTCAA 59.094 45.455 0.00 0.00 0.00 3.02
1619 1681 3.327757 ACCACTACTGCATCTTCCTCAAA 59.672 43.478 0.00 0.00 0.00 2.69
1620 1682 4.202461 ACCACTACTGCATCTTCCTCAAAA 60.202 41.667 0.00 0.00 0.00 2.44
1621 1683 4.761739 CCACTACTGCATCTTCCTCAAAAA 59.238 41.667 0.00 0.00 0.00 1.94
1743 1806 8.209917 AGCTATTTACTTGTAATTGTGTAGCC 57.790 34.615 0.00 0.00 0.00 3.93
1752 1815 6.804770 TGTAATTGTGTAGCCGTTTATTGT 57.195 33.333 0.00 0.00 0.00 2.71
1801 1864 3.740115 AGCAAGCTTCGGAAGTTTAAGA 58.260 40.909 17.66 0.00 30.35 2.10
1811 1874 4.935808 TCGGAAGTTTAAGATTCCTTCTGC 59.064 41.667 15.11 0.00 42.40 4.26
1814 1877 5.707764 GGAAGTTTAAGATTCCTTCTGCTGT 59.292 40.000 11.61 0.00 41.52 4.40
1822 1885 7.352951 TAAGATTCCTTCTGCTGTGGCATAAC 61.353 42.308 0.00 0.00 39.53 1.89
1880 1943 2.674357 GTTGCCAATTTGCCATCACATC 59.326 45.455 0.00 0.00 0.00 3.06
1986 2049 1.691434 GCCTTTGGTGGAAATTGGTGA 59.309 47.619 0.00 0.00 0.00 4.02
2173 2236 5.767168 GGAGCTGAAGTATGATTATGGCTTT 59.233 40.000 0.00 0.00 0.00 3.51
2218 2281 5.008019 CCTGTGATTTCCATGTTCTATTCCG 59.992 44.000 0.00 0.00 0.00 4.30
2228 2291 4.698201 TGTTCTATTCCGGGAATATGCA 57.302 40.909 25.56 20.55 34.57 3.96
2242 2305 5.300286 GGGAATATGCACAGCTAATTGTCTT 59.700 40.000 0.00 0.00 0.00 3.01
2255 2318 9.552114 CAGCTAATTGTCTTCTTTGTTAGATTG 57.448 33.333 0.00 0.00 31.54 2.67
2256 2319 8.734386 AGCTAATTGTCTTCTTTGTTAGATTGG 58.266 33.333 0.00 0.00 31.54 3.16
2277 2340 2.025699 GTCATGTTAAGCCCACCCCTAA 60.026 50.000 0.00 0.00 0.00 2.69
2282 2345 5.272405 TGTTAAGCCCACCCCTAATTTTA 57.728 39.130 0.00 0.00 0.00 1.52
2298 2361 9.264719 CCCTAATTTTATTTTTCTGGATCATGC 57.735 33.333 0.00 0.00 0.00 4.06
2405 2468 2.441750 TGAGTTTGCAAGAGGGGTAAGT 59.558 45.455 0.00 0.00 0.00 2.24
2419 2482 7.948357 AGAGGGGTAAGTTTTTGTTGTTTATC 58.052 34.615 0.00 0.00 0.00 1.75
2445 2508 9.793245 CAATGTTCTTTACTACTGTAAACTTCG 57.207 33.333 0.00 0.00 41.91 3.79
2483 2546 2.431954 ATGAGCCTTTGATGGACTGG 57.568 50.000 0.00 0.00 0.00 4.00
2513 2578 3.865745 CCTCTACGCACAGTTTAATCCTG 59.134 47.826 2.08 2.08 36.01 3.86
2536 2601 9.449719 CCTGTTATTACTAGAAAATGTTCCTGT 57.550 33.333 0.00 0.00 33.92 4.00
2595 2660 0.752743 CGGCCCATCCATGTTGTCAT 60.753 55.000 0.00 0.00 34.01 3.06
2651 2716 6.674760 GCCAAGTTATCAACCTATTCAACGAC 60.675 42.308 0.00 0.00 0.00 4.34
2658 2723 0.248289 CCTATTCAACGACGGTGGGT 59.752 55.000 13.91 4.62 0.00 4.51
2719 2784 2.927477 GAGCAAACACCGATTATCGTGA 59.073 45.455 13.73 0.00 38.40 4.35
2767 2832 9.998106 ACGGCTCAACAGATAATTAAGTAATAT 57.002 29.630 0.00 0.00 0.00 1.28
2812 2877 8.706322 TTTAATTAAAGAAGGAAGTCAAGGCT 57.294 30.769 6.54 0.00 0.00 4.58
2855 2920 6.721571 TGATGAACCTTGTTAAGATTCGTC 57.278 37.500 9.83 9.83 36.35 4.20
2884 2949 1.734163 AATGTGCTAGCCACCGTAAC 58.266 50.000 13.29 1.91 44.01 2.50
2896 2961 0.606604 ACCGTAACACTGCAGTAGGG 59.393 55.000 21.20 20.62 35.29 3.53
2898 2963 1.274167 CCGTAACACTGCAGTAGGGAA 59.726 52.381 21.20 0.47 32.67 3.97
2899 2964 2.093658 CCGTAACACTGCAGTAGGGAAT 60.094 50.000 21.20 4.84 32.67 3.01
2900 2965 3.596214 CGTAACACTGCAGTAGGGAATT 58.404 45.455 21.20 9.56 32.67 2.17
2902 2967 4.092968 CGTAACACTGCAGTAGGGAATTTC 59.907 45.833 21.20 4.70 32.67 2.17
2991 3064 7.878547 AAATTCCAATTTCCACACAAAACAT 57.121 28.000 0.00 0.00 33.54 2.71
3019 3092 3.736581 GCGAGCGCAAATAAGATCC 57.263 52.632 11.47 0.00 41.49 3.36
3029 3102 3.065371 GCAAATAAGATCCCGACACAAGG 59.935 47.826 0.00 0.00 0.00 3.61
3079 3152 2.281070 CATGGCGGCGGATAAGCT 60.281 61.111 9.78 0.00 37.29 3.74
3082 3155 2.967615 GGCGGCGGATAAGCTGTC 60.968 66.667 9.78 0.00 44.91 3.51
3125 3198 4.614475 ACCTCTATCTCAATGGTGTCAGA 58.386 43.478 0.00 0.00 0.00 3.27
3126 3199 4.648762 ACCTCTATCTCAATGGTGTCAGAG 59.351 45.833 0.00 0.00 0.00 3.35
3130 3203 0.671472 CTCAATGGTGTCAGAGCGCA 60.671 55.000 11.47 0.00 0.00 6.09
3168 3241 3.412386 GCCATAGTTGAAACAGGTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3181 3254 1.638589 AGGTGTCTGTCTCTAGCTCCT 59.361 52.381 0.00 0.00 0.00 3.69
3224 3297 0.107508 AACATGATGGAGCTGGACCG 60.108 55.000 0.00 0.00 0.00 4.79
3228 3301 0.105709 TGATGGAGCTGGACCGGATA 60.106 55.000 9.46 0.00 0.00 2.59
3309 3384 9.509855 TTTTTGCGCGAAATTTATATATGTTCT 57.490 25.926 22.96 0.00 0.00 3.01
3348 3423 2.702592 AAAACCCGTTCAGTGACAGA 57.297 45.000 0.00 0.00 0.00 3.41
3349 3424 2.930826 AAACCCGTTCAGTGACAGAT 57.069 45.000 0.00 0.00 0.00 2.90
3350 3425 2.457366 AACCCGTTCAGTGACAGATC 57.543 50.000 0.00 0.00 0.00 2.75
3351 3426 1.338107 ACCCGTTCAGTGACAGATCA 58.662 50.000 0.00 0.00 0.00 2.92
3362 3437 3.531934 TGACAGATCACACATAGCCAG 57.468 47.619 0.00 0.00 0.00 4.85
3363 3438 2.833943 TGACAGATCACACATAGCCAGT 59.166 45.455 0.00 0.00 0.00 4.00
3364 3439 3.261643 TGACAGATCACACATAGCCAGTT 59.738 43.478 0.00 0.00 0.00 3.16
3365 3440 3.866651 ACAGATCACACATAGCCAGTTC 58.133 45.455 0.00 0.00 0.00 3.01
3366 3441 2.862536 CAGATCACACATAGCCAGTTCG 59.137 50.000 0.00 0.00 0.00 3.95
3367 3442 2.760650 AGATCACACATAGCCAGTTCGA 59.239 45.455 0.00 0.00 0.00 3.71
3368 3443 3.195610 AGATCACACATAGCCAGTTCGAA 59.804 43.478 0.00 0.00 0.00 3.71
3369 3444 3.610040 TCACACATAGCCAGTTCGAAT 57.390 42.857 0.00 0.00 0.00 3.34
3370 3445 3.937814 TCACACATAGCCAGTTCGAATT 58.062 40.909 0.00 0.00 0.00 2.17
3371 3446 3.932710 TCACACATAGCCAGTTCGAATTC 59.067 43.478 0.00 0.00 0.00 2.17
3372 3447 3.935203 CACACATAGCCAGTTCGAATTCT 59.065 43.478 0.00 0.00 0.00 2.40
3373 3448 4.393062 CACACATAGCCAGTTCGAATTCTT 59.607 41.667 0.00 0.00 0.00 2.52
3384 3459 4.095483 AGTTCGAATTCTTCATCATGCCAC 59.905 41.667 0.00 0.00 0.00 5.01
3478 3714 5.079643 AGGGGTTATATTCATGCATGTTCC 58.920 41.667 25.43 16.27 0.00 3.62
3480 3716 5.278957 GGGGTTATATTCATGCATGTTCCAC 60.279 44.000 25.43 14.96 0.00 4.02
3565 3801 7.201875 CCGGTTAATTAATTCTAGTTGGCCAAT 60.202 37.037 23.66 13.16 0.00 3.16
3571 3807 5.717119 AATTCTAGTTGGCCAATAGGAGT 57.283 39.130 23.66 14.60 36.89 3.85
3583 3819 0.255890 ATAGGAGTGGCGTGGCATTT 59.744 50.000 0.00 0.00 0.00 2.32
3613 3849 7.601856 TCAGCTGTTTTAATCGGATCATTTTT 58.398 30.769 14.67 0.00 0.00 1.94
3637 3873 3.702548 CCCAGCAATTCCTTCATGAATCA 59.297 43.478 8.96 0.00 33.91 2.57
3641 3877 3.129287 GCAATTCCTTCATGAATCACGGT 59.871 43.478 8.96 0.00 33.91 4.83
3642 3878 4.731773 GCAATTCCTTCATGAATCACGGTC 60.732 45.833 8.96 0.00 33.91 4.79
3643 3879 3.981071 TTCCTTCATGAATCACGGTCT 57.019 42.857 8.96 0.00 0.00 3.85
3644 3880 3.526931 TCCTTCATGAATCACGGTCTC 57.473 47.619 8.96 0.00 0.00 3.36
3645 3881 3.099905 TCCTTCATGAATCACGGTCTCT 58.900 45.455 8.96 0.00 0.00 3.10
3646 3882 4.278310 TCCTTCATGAATCACGGTCTCTA 58.722 43.478 8.96 0.00 0.00 2.43
3651 3887 4.520874 TCATGAATCACGGTCTCTATCTCC 59.479 45.833 0.00 0.00 0.00 3.71
3662 3898 5.622460 CGGTCTCTATCTCCCCATTAATTCG 60.622 48.000 0.00 0.00 0.00 3.34
3685 3921 0.320374 TGCACCGGTCCACTCTTTAG 59.680 55.000 2.59 0.00 0.00 1.85
3692 3928 4.776308 ACCGGTCCACTCTTTAGTAATCTT 59.224 41.667 0.00 0.00 33.48 2.40
3703 3939 8.594550 ACTCTTTAGTAATCTTGAGGCACTTAA 58.405 33.333 0.00 0.00 33.28 1.85
3713 3949 7.523293 TCTTGAGGCACTTAATTGATTTCAA 57.477 32.000 0.00 0.00 41.55 2.69
3746 3982 8.477984 ACATTTATAAATTGGTGACATTGTGC 57.522 30.769 8.01 0.00 42.32 4.57
3747 3983 8.093307 ACATTTATAAATTGGTGACATTGTGCA 58.907 29.630 8.01 0.00 42.32 4.57
3776 4012 8.223177 AGGAGCGATGTGGTACTATATAATAC 57.777 38.462 0.00 0.00 37.53 1.89
3777 4013 8.053963 AGGAGCGATGTGGTACTATATAATACT 58.946 37.037 1.70 0.00 37.53 2.12
3778 4014 8.344098 GGAGCGATGTGGTACTATATAATACTC 58.656 40.741 1.70 0.00 0.00 2.59
3779 4015 8.223177 AGCGATGTGGTACTATATAATACTCC 57.777 38.462 1.70 0.00 0.00 3.85
3781 4017 7.284944 GCGATGTGGTACTATATAATACTCCCT 59.715 40.741 1.70 0.00 0.00 4.20
3782 4018 8.838365 CGATGTGGTACTATATAATACTCCCTC 58.162 40.741 1.70 0.00 0.00 4.30
3783 4019 9.134055 GATGTGGTACTATATAATACTCCCTCC 57.866 40.741 1.70 0.00 0.00 4.30
3784 4020 7.114754 TGTGGTACTATATAATACTCCCTCCG 58.885 42.308 1.70 0.00 0.00 4.63
3785 4021 7.115414 GTGGTACTATATAATACTCCCTCCGT 58.885 42.308 1.70 0.00 0.00 4.69
3786 4022 7.613411 GTGGTACTATATAATACTCCCTCCGTT 59.387 40.741 1.70 0.00 0.00 4.44
3787 4023 7.831193 TGGTACTATATAATACTCCCTCCGTTC 59.169 40.741 1.70 0.00 0.00 3.95
3789 4025 7.042106 ACTATATAATACTCCCTCCGTTCCT 57.958 40.000 0.00 0.00 0.00 3.36
3790 4026 8.167691 ACTATATAATACTCCCTCCGTTCCTA 57.832 38.462 0.00 0.00 0.00 2.94
3791 4027 8.618385 ACTATATAATACTCCCTCCGTTCCTAA 58.382 37.037 0.00 0.00 0.00 2.69
3792 4028 9.471702 CTATATAATACTCCCTCCGTTCCTAAA 57.528 37.037 0.00 0.00 0.00 1.85
3793 4029 8.912614 ATATAATACTCCCTCCGTTCCTAAAT 57.087 34.615 0.00 0.00 0.00 1.40
3795 4031 8.912614 ATAATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
3797 4033 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
3798 4034 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3799 4035 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3800 4036 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3801 4037 5.541484 TCCCTCCGTTCCTAAATATAAGTCC 59.459 44.000 0.00 0.00 0.00 3.85
3802 4038 5.543020 CCCTCCGTTCCTAAATATAAGTCCT 59.457 44.000 0.00 0.00 0.00 3.85
3803 4039 6.042897 CCCTCCGTTCCTAAATATAAGTCCTT 59.957 42.308 0.00 0.00 0.00 3.36
3804 4040 6.929606 CCTCCGTTCCTAAATATAAGTCCTTG 59.070 42.308 0.00 0.00 0.00 3.61
3805 4041 7.418712 CCTCCGTTCCTAAATATAAGTCCTTGT 60.419 40.741 0.00 0.00 0.00 3.16
3806 4042 8.537728 TCCGTTCCTAAATATAAGTCCTTGTA 57.462 34.615 0.00 0.00 0.00 2.41
3807 4043 8.636213 TCCGTTCCTAAATATAAGTCCTTGTAG 58.364 37.037 0.00 0.00 0.00 2.74
3808 4044 8.636213 CCGTTCCTAAATATAAGTCCTTGTAGA 58.364 37.037 0.00 0.00 0.00 2.59
3809 4045 9.680315 CGTTCCTAAATATAAGTCCTTGTAGAG 57.320 37.037 0.00 0.00 0.00 2.43
3821 4057 7.118496 AGTCCTTGTAGAGATTTCAGTATGG 57.882 40.000 0.00 0.00 36.16 2.74
3822 4058 6.897966 AGTCCTTGTAGAGATTTCAGTATGGA 59.102 38.462 0.00 0.00 36.16 3.41
3823 4059 7.566879 AGTCCTTGTAGAGATTTCAGTATGGAT 59.433 37.037 0.00 0.00 36.16 3.41
3824 4060 7.870445 GTCCTTGTAGAGATTTCAGTATGGATC 59.130 40.741 0.00 0.00 36.16 3.36
3825 4061 7.565029 TCCTTGTAGAGATTTCAGTATGGATCA 59.435 37.037 0.00 0.00 36.16 2.92
3826 4062 7.655328 CCTTGTAGAGATTTCAGTATGGATCAC 59.345 40.741 0.00 0.00 36.16 3.06
3827 4063 7.660030 TGTAGAGATTTCAGTATGGATCACA 57.340 36.000 0.00 0.00 36.16 3.58
3828 4064 8.255111 TGTAGAGATTTCAGTATGGATCACAT 57.745 34.615 0.00 0.00 43.68 3.21
3829 4065 9.367160 TGTAGAGATTTCAGTATGGATCACATA 57.633 33.333 0.00 0.00 41.03 2.29
3842 4078 6.759497 TGGATCACATACGGATGTATCTAG 57.241 41.667 14.23 0.19 44.82 2.43
3843 4079 6.481643 TGGATCACATACGGATGTATCTAGA 58.518 40.000 14.23 6.57 44.82 2.43
3844 4080 7.119387 TGGATCACATACGGATGTATCTAGAT 58.881 38.462 14.23 11.51 44.82 1.98
3845 4081 7.067494 TGGATCACATACGGATGTATCTAGATG 59.933 40.741 14.23 0.00 44.82 2.90
3846 4082 6.196079 TCACATACGGATGTATCTAGATGC 57.804 41.667 14.23 14.54 44.82 3.91
3847 4083 5.710099 TCACATACGGATGTATCTAGATGCA 59.290 40.000 23.38 23.38 44.82 3.96
3848 4084 6.378280 TCACATACGGATGTATCTAGATGCAT 59.622 38.462 29.54 29.54 44.82 3.96
3849 4085 7.038048 CACATACGGATGTATCTAGATGCATT 58.962 38.462 29.66 19.73 44.82 3.56
3850 4086 7.547019 CACATACGGATGTATCTAGATGCATTT 59.453 37.037 29.66 21.00 44.82 2.32
3851 4087 8.097038 ACATACGGATGTATCTAGATGCATTTT 58.903 33.333 29.66 20.74 44.77 1.82
3852 4088 9.586435 CATACGGATGTATCTAGATGCATTTTA 57.414 33.333 29.66 21.80 42.77 1.52
3853 4089 9.809096 ATACGGATGTATCTAGATGCATTTTAG 57.191 33.333 29.66 22.88 42.77 1.85
3854 4090 7.896811 ACGGATGTATCTAGATGCATTTTAGA 58.103 34.615 29.66 18.53 42.77 2.10
3855 4091 8.031864 ACGGATGTATCTAGATGCATTTTAGAG 58.968 37.037 29.66 20.36 42.77 2.43
3856 4092 8.031864 CGGATGTATCTAGATGCATTTTAGAGT 58.968 37.037 29.66 12.13 42.77 3.24
3866 4102 8.472683 AGATGCATTTTAGAGTATAGATTCGC 57.527 34.615 0.00 0.00 0.00 4.70
3867 4103 8.310382 AGATGCATTTTAGAGTATAGATTCGCT 58.690 33.333 0.00 0.00 0.00 4.93
3868 4104 7.875316 TGCATTTTAGAGTATAGATTCGCTC 57.125 36.000 0.00 0.00 0.00 5.03
3869 4105 7.433680 TGCATTTTAGAGTATAGATTCGCTCA 58.566 34.615 0.00 0.00 0.00 4.26
3870 4106 8.090831 TGCATTTTAGAGTATAGATTCGCTCAT 58.909 33.333 0.00 0.00 0.00 2.90
3871 4107 8.930760 GCATTTTAGAGTATAGATTCGCTCATT 58.069 33.333 0.00 0.00 0.00 2.57
3875 4111 6.777526 AGAGTATAGATTCGCTCATTTTGC 57.222 37.500 0.00 0.00 0.00 3.68
3876 4112 6.520272 AGAGTATAGATTCGCTCATTTTGCT 58.480 36.000 0.00 0.00 0.00 3.91
3877 4113 6.644592 AGAGTATAGATTCGCTCATTTTGCTC 59.355 38.462 0.00 0.00 0.00 4.26
3878 4114 5.698545 AGTATAGATTCGCTCATTTTGCTCC 59.301 40.000 0.00 0.00 0.00 4.70
3879 4115 1.667724 AGATTCGCTCATTTTGCTCCG 59.332 47.619 0.00 0.00 0.00 4.63
3880 4116 1.398390 GATTCGCTCATTTTGCTCCGT 59.602 47.619 0.00 0.00 0.00 4.69
3881 4117 2.087501 TTCGCTCATTTTGCTCCGTA 57.912 45.000 0.00 0.00 0.00 4.02
3882 4118 2.309528 TCGCTCATTTTGCTCCGTAT 57.690 45.000 0.00 0.00 0.00 3.06
3883 4119 1.933181 TCGCTCATTTTGCTCCGTATG 59.067 47.619 0.00 0.00 0.00 2.39
3884 4120 1.665679 CGCTCATTTTGCTCCGTATGT 59.334 47.619 0.00 0.00 0.00 2.29
3885 4121 2.537529 CGCTCATTTTGCTCCGTATGTG 60.538 50.000 0.00 0.00 0.00 3.21
3886 4122 2.223340 GCTCATTTTGCTCCGTATGTGG 60.223 50.000 0.00 0.00 0.00 4.17
3887 4123 3.009723 CTCATTTTGCTCCGTATGTGGT 58.990 45.455 0.00 0.00 0.00 4.16
3888 4124 3.417101 TCATTTTGCTCCGTATGTGGTT 58.583 40.909 0.00 0.00 0.00 3.67
3889 4125 3.438781 TCATTTTGCTCCGTATGTGGTTC 59.561 43.478 0.00 0.00 0.00 3.62
3890 4126 2.552599 TTTGCTCCGTATGTGGTTCA 57.447 45.000 0.00 0.00 0.00 3.18
3891 4127 2.779755 TTGCTCCGTATGTGGTTCAT 57.220 45.000 0.00 0.00 40.25 2.57
3892 4128 3.897141 TTGCTCCGTATGTGGTTCATA 57.103 42.857 0.00 0.00 37.91 2.15
3893 4129 3.452755 TGCTCCGTATGTGGTTCATAG 57.547 47.619 0.00 0.00 39.36 2.23
3894 4130 2.764010 TGCTCCGTATGTGGTTCATAGT 59.236 45.455 0.00 0.00 39.36 2.12
3895 4131 3.123804 GCTCCGTATGTGGTTCATAGTG 58.876 50.000 0.00 0.00 39.36 2.74
3896 4132 3.181479 GCTCCGTATGTGGTTCATAGTGA 60.181 47.826 0.00 0.00 39.36 3.41
3897 4133 4.679639 GCTCCGTATGTGGTTCATAGTGAA 60.680 45.833 0.00 0.00 39.36 3.18
3898 4134 5.408880 TCCGTATGTGGTTCATAGTGAAA 57.591 39.130 0.00 0.00 38.22 2.69
3899 4135 5.984725 TCCGTATGTGGTTCATAGTGAAAT 58.015 37.500 0.00 0.00 38.22 2.17
3900 4136 6.046593 TCCGTATGTGGTTCATAGTGAAATC 58.953 40.000 0.00 0.00 38.22 2.17
3901 4137 6.049149 CCGTATGTGGTTCATAGTGAAATCT 58.951 40.000 0.00 0.00 38.22 2.40
3902 4138 6.201044 CCGTATGTGGTTCATAGTGAAATCTC 59.799 42.308 0.00 0.00 38.22 2.75
3903 4139 6.980978 CGTATGTGGTTCATAGTGAAATCTCT 59.019 38.462 0.00 0.00 38.22 3.10
3904 4140 7.168302 CGTATGTGGTTCATAGTGAAATCTCTC 59.832 40.741 0.00 0.00 38.22 3.20
3905 4141 5.734720 TGTGGTTCATAGTGAAATCTCTCC 58.265 41.667 0.00 0.00 38.22 3.71
3906 4142 5.248248 TGTGGTTCATAGTGAAATCTCTCCA 59.752 40.000 0.00 0.00 38.22 3.86
3907 4143 6.173339 GTGGTTCATAGTGAAATCTCTCCAA 58.827 40.000 0.00 0.00 38.22 3.53
3908 4144 6.655003 GTGGTTCATAGTGAAATCTCTCCAAA 59.345 38.462 0.00 0.00 38.22 3.28
3909 4145 6.881065 TGGTTCATAGTGAAATCTCTCCAAAG 59.119 38.462 0.00 0.00 38.22 2.77
3910 4146 7.106239 GGTTCATAGTGAAATCTCTCCAAAGA 58.894 38.462 0.00 0.00 38.22 2.52
3911 4147 7.065204 GGTTCATAGTGAAATCTCTCCAAAGAC 59.935 40.741 0.00 0.00 38.22 3.01
3912 4148 7.487822 TCATAGTGAAATCTCTCCAAAGACT 57.512 36.000 0.00 0.00 0.00 3.24
3913 4149 7.911651 TCATAGTGAAATCTCTCCAAAGACTT 58.088 34.615 0.00 0.00 0.00 3.01
3914 4150 7.821359 TCATAGTGAAATCTCTCCAAAGACTTG 59.179 37.037 0.00 0.00 0.00 3.16
3915 4151 5.934781 AGTGAAATCTCTCCAAAGACTTGT 58.065 37.500 0.00 0.00 0.00 3.16
3916 4152 7.067496 AGTGAAATCTCTCCAAAGACTTGTA 57.933 36.000 0.00 0.00 0.00 2.41
3917 4153 7.684529 AGTGAAATCTCTCCAAAGACTTGTAT 58.315 34.615 0.00 0.00 0.00 2.29
3918 4154 8.160106 AGTGAAATCTCTCCAAAGACTTGTATT 58.840 33.333 0.00 0.00 0.00 1.89
3919 4155 8.787852 GTGAAATCTCTCCAAAGACTTGTATTT 58.212 33.333 0.00 0.00 0.00 1.40
3922 4158 9.454859 AAATCTCTCCAAAGACTTGTATTTAGG 57.545 33.333 0.00 0.00 0.00 2.69
3923 4159 7.792364 TCTCTCCAAAGACTTGTATTTAGGA 57.208 36.000 0.00 9.70 0.00 2.94
3924 4160 8.202461 TCTCTCCAAAGACTTGTATTTAGGAA 57.798 34.615 10.63 5.08 0.00 3.36
3925 4161 8.095169 TCTCTCCAAAGACTTGTATTTAGGAAC 58.905 37.037 10.63 0.00 0.00 3.62
3926 4162 6.872020 TCTCCAAAGACTTGTATTTAGGAACG 59.128 38.462 10.63 0.00 0.00 3.95
3927 4163 5.935789 TCCAAAGACTTGTATTTAGGAACGG 59.064 40.000 8.46 0.60 0.00 4.44
3928 4164 5.935789 CCAAAGACTTGTATTTAGGAACGGA 59.064 40.000 0.00 0.00 0.00 4.69
3929 4165 6.092259 CCAAAGACTTGTATTTAGGAACGGAG 59.908 42.308 0.00 0.00 0.00 4.63
3930 4166 5.340439 AGACTTGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
3931 4167 4.161754 AGACTTGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
3932 4168 4.098894 ACTTGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
3933 4169 4.161754 ACTTGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
3934 4170 3.716431 TGTATTTAGGAACGGAGGGAGT 58.284 45.455 0.00 0.00 0.00 3.85
3935 4171 4.870636 TGTATTTAGGAACGGAGGGAGTA 58.129 43.478 0.00 0.00 0.00 2.59
3936 4172 5.271598 TGTATTTAGGAACGGAGGGAGTAA 58.728 41.667 0.00 0.00 0.00 2.24
3937 4173 5.721000 TGTATTTAGGAACGGAGGGAGTAAA 59.279 40.000 0.00 0.00 0.00 2.01
3938 4174 5.970501 ATTTAGGAACGGAGGGAGTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
3939 4175 7.564660 TGTATTTAGGAACGGAGGGAGTAAATA 59.435 37.037 0.00 0.00 0.00 1.40
3940 4176 5.859205 TTAGGAACGGAGGGAGTAAATAC 57.141 43.478 0.00 0.00 0.00 1.89
3941 4177 2.692041 AGGAACGGAGGGAGTAAATACG 59.308 50.000 0.00 0.00 0.00 3.06
3942 4178 2.689983 GGAACGGAGGGAGTAAATACGA 59.310 50.000 0.00 0.00 0.00 3.43
3943 4179 3.131046 GGAACGGAGGGAGTAAATACGAA 59.869 47.826 0.00 0.00 0.00 3.85
3944 4180 4.381932 GGAACGGAGGGAGTAAATACGAAA 60.382 45.833 0.00 0.00 0.00 3.46
3945 4181 4.115401 ACGGAGGGAGTAAATACGAAAC 57.885 45.455 0.00 0.00 0.00 2.78
3946 4182 3.118992 ACGGAGGGAGTAAATACGAAACC 60.119 47.826 0.00 0.00 0.00 3.27
3947 4183 3.131755 CGGAGGGAGTAAATACGAAACCT 59.868 47.826 0.00 0.00 0.00 3.50
3948 4184 4.691175 GGAGGGAGTAAATACGAAACCTC 58.309 47.826 0.00 0.00 41.86 3.85
3949 4185 4.405036 GGAGGGAGTAAATACGAAACCTCT 59.595 45.833 17.19 0.00 42.16 3.69
3982 4218 8.918202 TTCACAAATATGAGTTAGGTCAGTTT 57.082 30.769 0.00 0.00 0.00 2.66
4019 4256 4.357918 ACTTGATAGCAGGTGTGAGTTT 57.642 40.909 0.00 0.00 32.54 2.66
4026 4263 1.545428 GCAGGTGTGAGTTTGATCCCA 60.545 52.381 0.00 0.00 0.00 4.37
4027 4264 2.862541 CAGGTGTGAGTTTGATCCCAA 58.137 47.619 0.00 0.00 0.00 4.12
4034 4271 5.940470 GTGTGAGTTTGATCCCAAGTATCTT 59.060 40.000 0.00 0.00 33.23 2.40
4039 4276 5.946377 AGTTTGATCCCAAGTATCTTCAACC 59.054 40.000 0.00 0.00 33.23 3.77
4040 4277 5.512942 TTGATCCCAAGTATCTTCAACCA 57.487 39.130 0.00 0.00 0.00 3.67
4059 4298 1.656818 ATTGCCGGATTTGCTGACCG 61.657 55.000 5.05 0.00 45.24 4.79
4062 4301 3.864686 CGGATTTGCTGACCGGCG 61.865 66.667 0.00 0.00 42.48 6.46
4063 4302 3.508840 GGATTTGCTGACCGGCGG 61.509 66.667 27.06 27.06 34.52 6.13
4144 4386 7.400599 TGTCGACTTATTACTAATGGACTGT 57.599 36.000 17.92 0.00 0.00 3.55
4205 4610 2.426522 ACACATGACGGACCAAGAATG 58.573 47.619 0.00 0.00 0.00 2.67
4206 4611 1.131126 CACATGACGGACCAAGAATGC 59.869 52.381 0.00 0.00 0.00 3.56
4319 4730 4.160814 TCTGAGTATTTAAAGCTACGGCCA 59.839 41.667 2.24 0.00 39.73 5.36
4333 4744 2.588620 ACGGCCAAAACAAAGATGGTA 58.411 42.857 2.24 0.00 36.57 3.25
4521 4932 4.271291 GGAAGAAAGACGGATAATGCACTC 59.729 45.833 0.00 0.00 0.00 3.51
4542 4953 5.426833 ACTCTTGACTAAGATTGCACCCTAT 59.573 40.000 0.00 0.00 41.83 2.57
4842 5258 2.925563 GCATTTTTGCAGCTACATGACC 59.074 45.455 0.00 0.00 34.41 4.02
4929 5362 4.350368 TCAGTTGATAAGCCTGTGTTGA 57.650 40.909 0.00 0.00 0.00 3.18
4939 5372 5.948992 AAGCCTGTGTTGATTTTCTAGAC 57.051 39.130 0.00 0.00 0.00 2.59
5042 5475 4.101448 GGGCACTGGGCTCGTGAT 62.101 66.667 11.90 0.00 44.01 3.06
5077 5510 5.064707 GCGACTGGAAAAATAAGTGCTATCA 59.935 40.000 0.00 0.00 0.00 2.15
5130 5563 5.344743 CTGCCAGAACAGTCCTAAGAATA 57.655 43.478 0.00 0.00 32.78 1.75
5158 5591 8.469200 CAAGTATTTCCTTGCATCCTTTAATGA 58.531 33.333 0.00 0.00 35.80 2.57
5164 5597 5.481473 TCCTTGCATCCTTTAATGAAGCTTT 59.519 36.000 0.00 0.00 33.84 3.51
5186 5619 8.915654 GCTTTCTTGTGATGTTACCTTTTATTG 58.084 33.333 0.00 0.00 0.00 1.90
5339 5772 2.839975 TGTTTGTGCAATCGTCCAGTA 58.160 42.857 0.00 0.00 0.00 2.74
5374 5807 5.554437 TGGTTATGCCAAGGACGAATATA 57.446 39.130 0.00 0.00 45.94 0.86
5505 5941 3.268023 ACCTTTCAGCCATGTAGTAGC 57.732 47.619 0.00 0.00 0.00 3.58
5598 6039 4.080299 TGAGTGTAGAGAGCAGGTATCTGA 60.080 45.833 7.33 0.00 43.49 3.27
5698 6139 4.672587 GCAGGTATCTGGTGATAAGTGA 57.327 45.455 4.87 0.00 41.19 3.41
5701 6142 5.302059 GCAGGTATCTGGTGATAAGTGAGTA 59.698 44.000 4.87 0.00 41.19 2.59
5857 6300 6.995686 TGCCTGTTGTTTTACATTCTTCTCTA 59.004 34.615 0.00 0.00 0.00 2.43
5873 6316 4.527509 TCTCTACTGAGTTGCTTTCCTG 57.472 45.455 0.00 0.00 40.98 3.86
5882 6325 1.398390 GTTGCTTTCCTGGCAGTATCG 59.602 52.381 14.43 0.00 40.90 2.92
5944 6390 2.405618 ATCCAAGGAGGGATGATCGA 57.594 50.000 0.00 0.00 45.90 3.59
5956 6402 0.182061 ATGATCGAGCTGTTGGCCAT 59.818 50.000 6.09 0.00 43.05 4.40
6060 6506 1.832167 GCAAGAGCCACCCACCAAA 60.832 57.895 0.00 0.00 33.58 3.28
6137 6610 4.609018 CCCGTGATAGCCGCCCAG 62.609 72.222 0.00 0.00 0.00 4.45
6140 6613 4.175337 GTGATAGCCGCCCAGCCA 62.175 66.667 0.00 0.00 0.00 4.75
6141 6614 4.175337 TGATAGCCGCCCAGCCAC 62.175 66.667 0.00 0.00 0.00 5.01
6142 6615 4.937431 GATAGCCGCCCAGCCACC 62.937 72.222 0.00 0.00 0.00 4.61
6148 6621 4.641645 CGCCCAGCCACCAACAGA 62.642 66.667 0.00 0.00 0.00 3.41
6149 6622 2.203480 GCCCAGCCACCAACAGAA 60.203 61.111 0.00 0.00 0.00 3.02
6150 6623 1.607467 GCCCAGCCACCAACAGAAT 60.607 57.895 0.00 0.00 0.00 2.40
6151 6624 1.880819 GCCCAGCCACCAACAGAATG 61.881 60.000 0.00 0.00 46.00 2.67
6152 6625 0.251297 CCCAGCCACCAACAGAATGA 60.251 55.000 0.00 0.00 39.69 2.57
6153 6626 1.171308 CCAGCCACCAACAGAATGAG 58.829 55.000 0.00 0.00 39.69 2.90
6154 6627 0.524862 CAGCCACCAACAGAATGAGC 59.475 55.000 0.00 0.00 39.69 4.26
6155 6628 0.610232 AGCCACCAACAGAATGAGCC 60.610 55.000 0.00 0.00 39.69 4.70
6156 6629 1.598701 GCCACCAACAGAATGAGCCC 61.599 60.000 0.00 0.00 39.69 5.19
6157 6630 0.038744 CCACCAACAGAATGAGCCCT 59.961 55.000 0.00 0.00 39.69 5.19
6158 6631 1.281867 CCACCAACAGAATGAGCCCTA 59.718 52.381 0.00 0.00 39.69 3.53
6159 6632 2.636830 CACCAACAGAATGAGCCCTAG 58.363 52.381 0.00 0.00 39.69 3.02
6160 6633 1.065126 ACCAACAGAATGAGCCCTAGC 60.065 52.381 0.00 0.00 39.69 3.42
6161 6634 1.673168 CAACAGAATGAGCCCTAGCC 58.327 55.000 0.00 0.00 39.69 3.93
6162 6635 0.548510 AACAGAATGAGCCCTAGCCC 59.451 55.000 0.00 0.00 39.69 5.19
6176 6649 4.512914 GCCCCTGGGAGTGATGGC 62.513 72.222 16.20 2.80 37.50 4.40
6180 6653 1.528824 CCTGGGAGTGATGGCGAAT 59.471 57.895 0.00 0.00 0.00 3.34
6205 6678 0.668535 GCACCACCCTCAACTTGAAC 59.331 55.000 0.00 0.00 0.00 3.18
6311 6784 1.477295 CCTCCTCGTCTAAACCTGTCC 59.523 57.143 0.00 0.00 0.00 4.02
6312 6785 1.132643 CTCCTCGTCTAAACCTGTCCG 59.867 57.143 0.00 0.00 0.00 4.79
6313 6786 0.172803 CCTCGTCTAAACCTGTCCGG 59.827 60.000 0.00 0.00 39.35 5.14
6378 6860 1.532868 CGCCTTGTCTGAACCTGAAAG 59.467 52.381 0.00 0.00 0.00 2.62
6379 6861 2.576615 GCCTTGTCTGAACCTGAAAGT 58.423 47.619 0.00 0.00 0.00 2.66
6380 6862 2.550180 GCCTTGTCTGAACCTGAAAGTC 59.450 50.000 0.00 0.00 0.00 3.01
6446 6929 1.480954 AGTGTTGTCCAGACGTCACTT 59.519 47.619 19.50 0.00 41.38 3.16
6457 6940 5.810587 TCCAGACGTCACTTGCTAAATAATC 59.189 40.000 19.50 0.00 0.00 1.75
6468 6951 3.380004 TGCTAAATAATCGTTGCCCCTTG 59.620 43.478 0.00 0.00 0.00 3.61
6469 6952 3.243401 GCTAAATAATCGTTGCCCCTTGG 60.243 47.826 0.00 0.00 0.00 3.61
6477 6960 0.879090 GTTGCCCCTTGGTCGTAAAG 59.121 55.000 0.00 0.00 0.00 1.85
6502 6985 1.856539 TTCTACTCCCTCCGTCCCGT 61.857 60.000 0.00 0.00 0.00 5.28
6504 6987 0.534652 CTACTCCCTCCGTCCCGTAG 60.535 65.000 0.00 0.00 0.00 3.51
6505 6988 1.274703 TACTCCCTCCGTCCCGTAGT 61.275 60.000 0.00 0.00 0.00 2.73
6506 6989 2.044650 TCCCTCCGTCCCGTAGTG 60.045 66.667 0.00 0.00 0.00 2.74
6509 6992 0.680921 CCCTCCGTCCCGTAGTGTAA 60.681 60.000 0.00 0.00 0.00 2.41
6512 6995 2.029110 CCTCCGTCCCGTAGTGTAAAAA 60.029 50.000 0.00 0.00 0.00 1.94
6631 7371 7.068103 AGTGTTCCAATTAAGTTCATGTGTTCA 59.932 33.333 0.00 0.00 0.00 3.18
6824 7564 5.394663 CCAGGTCAACATGTTTTTACCAACA 60.395 40.000 25.41 0.00 40.92 3.33
6875 7615 3.071023 CAGTTCACCTCCCTTCAGTGTTA 59.929 47.826 0.00 0.00 33.21 2.41
6926 7666 6.045318 CGACATCTGAGAGTAATCCATGTTT 58.955 40.000 0.00 0.00 0.00 2.83
6934 7674 1.472480 GTAATCCATGTTTGTGCGGCT 59.528 47.619 0.00 0.00 0.00 5.52
6956 7696 2.049156 TCTGCTTCGTCTGCGGTG 60.049 61.111 0.00 0.00 37.96 4.94
7082 7822 3.480470 CACAAACTCCAGATTCCACAGT 58.520 45.455 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.103538 GCCCGACGAGATTACGCA 59.896 61.111 0.00 0.00 36.70 5.24
79 81 2.579738 GGCACGGGAGAAGAGGAC 59.420 66.667 0.00 0.00 0.00 3.85
253 255 7.119846 CGAATCTTCCTCAAACCTATCAAAAGT 59.880 37.037 0.00 0.00 0.00 2.66
269 271 0.175760 TAGCAAGCGCGAATCTTCCT 59.824 50.000 12.10 1.29 45.49 3.36
271 273 0.579156 CCTAGCAAGCGCGAATCTTC 59.421 55.000 12.10 0.00 45.49 2.87
357 359 7.395772 TCCCAACAGCATTATCAATAGTTGAAA 59.604 33.333 0.00 0.00 43.95 2.69
360 362 6.698008 TCCCAACAGCATTATCAATAGTTG 57.302 37.500 0.00 0.00 35.80 3.16
403 447 7.693969 AAGGAGAACACAGAATTAATTCCTG 57.306 36.000 21.86 19.78 37.51 3.86
429 473 0.897621 GTGAAAGGGGGCTGGAATTG 59.102 55.000 0.00 0.00 0.00 2.32
467 511 3.438781 AGCGGAATTGCGTCAAAATAAGA 59.561 39.130 20.72 0.00 40.67 2.10
541 585 8.382405 TGCACCATCATTACCTGTATACATTAT 58.618 33.333 5.91 0.00 0.00 1.28
787 833 2.127708 AGGAGGAGGCGGAACATAATT 58.872 47.619 0.00 0.00 0.00 1.40
863 909 2.210116 CACGTAAGGCGCTTCCATAAT 58.790 47.619 7.64 0.00 46.11 1.28
968 1014 7.113236 CTGCAAGAAAATTGATCGCATCAAGA 61.113 38.462 14.16 0.00 44.87 3.02
972 1018 4.418392 ACTGCAAGAAAATTGATCGCATC 58.582 39.130 0.00 0.00 37.43 3.91
974 1020 3.921119 ACTGCAAGAAAATTGATCGCA 57.079 38.095 0.00 0.00 37.43 5.10
1064 1112 6.683715 TCATAACGGTCATTATAGCGATCAA 58.316 36.000 2.18 0.00 42.76 2.57
1243 1291 3.616956 TCCCAAATTGCACACAAACAA 57.383 38.095 0.00 0.00 39.77 2.83
1250 1298 3.853355 AAATGGTTCCCAAATTGCACA 57.147 38.095 0.00 0.00 36.95 4.57
1337 1385 6.177610 AGGCGGAGTTCTAAATTGACAAATA 58.822 36.000 0.00 0.00 0.00 1.40
1340 1388 4.015872 AGGCGGAGTTCTAAATTGACAA 57.984 40.909 0.00 0.00 0.00 3.18
1341 1389 3.695830 AGGCGGAGTTCTAAATTGACA 57.304 42.857 0.00 0.00 0.00 3.58
1386 1437 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
1387 1438 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
1388 1439 1.689582 CTCCTCCTTTACCCGGGCT 60.690 63.158 24.08 10.93 0.00 5.19
1404 1455 2.019156 GCCAAGCCTATCACAACCCTC 61.019 57.143 0.00 0.00 0.00 4.30
1511 1562 3.010138 AGCCTTTAGTCCCAAACATGCTA 59.990 43.478 0.00 0.00 0.00 3.49
1515 1566 4.223144 ACAAAGCCTTTAGTCCCAAACAT 58.777 39.130 0.00 0.00 0.00 2.71
1529 1580 2.890945 GACCCATACAACAACAAAGCCT 59.109 45.455 0.00 0.00 0.00 4.58
1531 1582 4.314740 TTGACCCATACAACAACAAAGC 57.685 40.909 0.00 0.00 0.00 3.51
1532 1583 7.598493 CCTAAATTGACCCATACAACAACAAAG 59.402 37.037 0.00 0.00 0.00 2.77
1576 1638 2.091775 TCTTCACTCTAGTCCCTAGGCC 60.092 54.545 2.05 0.00 35.03 5.19
1579 1641 3.949113 GTGGTCTTCACTCTAGTCCCTAG 59.051 52.174 0.00 0.00 42.86 3.02
1580 1642 3.965694 GTGGTCTTCACTCTAGTCCCTA 58.034 50.000 0.00 0.00 42.86 3.53
1581 1643 2.810164 GTGGTCTTCACTCTAGTCCCT 58.190 52.381 0.00 0.00 42.86 4.20
1593 1655 3.196685 AGGAAGATGCAGTAGTGGTCTTC 59.803 47.826 13.24 13.24 42.38 2.87
1599 1661 5.947228 TTTTTGAGGAAGATGCAGTAGTG 57.053 39.130 0.00 0.00 0.00 2.74
1620 1682 6.524101 TGCAGTACTGGTCTTTTTCTTTTT 57.476 33.333 23.95 0.00 0.00 1.94
1621 1683 6.321181 TGATGCAGTACTGGTCTTTTTCTTTT 59.679 34.615 23.95 0.00 0.00 2.27
1622 1684 5.827797 TGATGCAGTACTGGTCTTTTTCTTT 59.172 36.000 23.95 0.00 0.00 2.52
1623 1685 5.239525 GTGATGCAGTACTGGTCTTTTTCTT 59.760 40.000 23.95 3.32 0.00 2.52
1624 1686 4.757149 GTGATGCAGTACTGGTCTTTTTCT 59.243 41.667 23.95 0.00 0.00 2.52
1625 1687 4.757149 AGTGATGCAGTACTGGTCTTTTTC 59.243 41.667 23.95 5.53 0.00 2.29
1626 1688 4.516698 CAGTGATGCAGTACTGGTCTTTTT 59.483 41.667 23.95 0.00 40.38 1.94
1627 1689 4.067896 CAGTGATGCAGTACTGGTCTTTT 58.932 43.478 23.95 0.00 40.38 2.27
1628 1690 3.324846 TCAGTGATGCAGTACTGGTCTTT 59.675 43.478 23.95 1.28 43.40 2.52
1629 1691 2.899900 TCAGTGATGCAGTACTGGTCTT 59.100 45.455 23.95 6.78 43.40 3.01
1630 1692 2.529632 TCAGTGATGCAGTACTGGTCT 58.470 47.619 23.95 0.00 43.40 3.85
1631 1693 3.533606 ATCAGTGATGCAGTACTGGTC 57.466 47.619 23.95 9.14 43.40 4.02
1632 1694 5.104776 ACATTATCAGTGATGCAGTACTGGT 60.105 40.000 23.95 21.91 43.40 4.00
1633 1695 5.363101 ACATTATCAGTGATGCAGTACTGG 58.637 41.667 23.95 14.81 43.40 4.00
1634 1696 8.599055 ATTACATTATCAGTGATGCAGTACTG 57.401 34.615 18.93 18.93 44.31 2.74
1635 1697 9.618890 AAATTACATTATCAGTGATGCAGTACT 57.381 29.630 16.15 6.76 0.00 2.73
1738 1801 5.173664 ACAGGTAAGACAATAAACGGCTAC 58.826 41.667 0.00 0.00 0.00 3.58
1743 1806 9.286946 CTCTACTAACAGGTAAGACAATAAACG 57.713 37.037 0.00 0.00 0.00 3.60
1752 1815 6.955364 TGCTAGTCTCTACTAACAGGTAAGA 58.045 40.000 0.00 0.00 37.75 2.10
1811 1874 4.789012 AAATCAACAGGTTATGCCACAG 57.211 40.909 0.00 0.00 40.61 3.66
1814 1877 4.021544 GGTCAAAATCAACAGGTTATGCCA 60.022 41.667 0.00 0.00 40.61 4.92
1822 1885 8.522830 ACTATGTAAATGGTCAAAATCAACAGG 58.477 33.333 0.00 0.00 0.00 4.00
1880 1943 2.856222 AGCTGGAAAGGTTTGTCTGAG 58.144 47.619 0.00 0.00 0.00 3.35
1986 2049 5.036117 TCTTCTGTAACTTTGGAGCAAGT 57.964 39.130 0.00 0.00 0.00 3.16
2196 2259 4.881273 CCGGAATAGAACATGGAAATCACA 59.119 41.667 0.00 0.00 0.00 3.58
2218 2281 4.823989 AGACAATTAGCTGTGCATATTCCC 59.176 41.667 0.00 0.00 0.00 3.97
2228 2291 8.854614 ATCTAACAAAGAAGACAATTAGCTGT 57.145 30.769 0.00 0.00 37.89 4.40
2242 2305 7.094377 GGCTTAACATGACCAATCTAACAAAGA 60.094 37.037 0.00 0.00 39.02 2.52
2255 2318 0.683179 GGGGTGGGCTTAACATGACC 60.683 60.000 0.00 0.00 0.00 4.02
2256 2319 0.331616 AGGGGTGGGCTTAACATGAC 59.668 55.000 0.00 0.00 0.00 3.06
2277 2340 7.332557 TGCAGCATGATCCAGAAAAATAAAAT 58.667 30.769 0.00 0.00 39.69 1.82
2282 2345 3.132289 CCTGCAGCATGATCCAGAAAAAT 59.868 43.478 8.66 0.00 39.69 1.82
2298 2361 1.576356 GGATCGCTAAACTCCTGCAG 58.424 55.000 6.78 6.78 0.00 4.41
2361 2424 1.451927 TGATGCGGCTCCCATCAAC 60.452 57.895 13.84 0.00 44.27 3.18
2430 2493 2.895404 TCAGGGCGAAGTTTACAGTAGT 59.105 45.455 0.00 0.00 0.00 2.73
2445 2508 2.057137 TTTGTAGATGGCATCAGGGC 57.943 50.000 27.93 14.95 43.73 5.19
2483 2546 3.851098 ACTGTGCGTAGAGGAGAATTTC 58.149 45.455 2.16 0.00 0.00 2.17
2527 2592 1.603802 CGTTGCAACTCACAGGAACAT 59.396 47.619 26.09 0.00 36.07 2.71
2531 2596 1.227823 CCCGTTGCAACTCACAGGA 60.228 57.895 26.09 0.00 0.00 3.86
2534 2599 0.179234 TTCTCCCGTTGCAACTCACA 59.821 50.000 26.09 7.50 0.00 3.58
2536 2601 1.305201 GTTTCTCCCGTTGCAACTCA 58.695 50.000 26.09 9.55 0.00 3.41
2538 2603 1.757682 TTGTTTCTCCCGTTGCAACT 58.242 45.000 26.09 0.00 0.00 3.16
2595 2660 5.244402 TGGTGACGGTAGTGAAGATTAGAAA 59.756 40.000 0.00 0.00 0.00 2.52
2658 2723 2.378547 AGTTTAAATGAGACTGGGGCCA 59.621 45.455 4.39 0.00 0.00 5.36
2696 2761 2.276201 CGATAATCGGTGTTTGCTCCA 58.724 47.619 0.00 0.00 36.00 3.86
2719 2784 6.128282 CCGTTTAACTACATTGTGATCTGCTT 60.128 38.462 0.00 0.00 0.00 3.91
2785 2850 9.758651 GCCTTGACTTCCTTCTTTAATTAAAAA 57.241 29.630 11.62 8.20 0.00 1.94
2812 2877 4.883759 TCATCCAGTCTCCTTCCATAAGA 58.116 43.478 0.00 0.00 34.37 2.10
2874 2939 0.320073 TACTGCAGTGTTACGGTGGC 60.320 55.000 29.57 0.00 0.00 5.01
2879 2944 2.736144 TTCCCTACTGCAGTGTTACG 57.264 50.000 29.57 11.65 0.00 3.18
2884 2949 2.009774 CGGAAATTCCCTACTGCAGTG 58.990 52.381 29.57 17.91 31.13 3.66
2896 2961 7.707774 TTTTCAAAGGAACATTCGGAAATTC 57.292 32.000 8.75 8.75 31.35 2.17
2898 2963 9.423061 CTAATTTTCAAAGGAACATTCGGAAAT 57.577 29.630 0.00 0.00 35.58 2.17
2899 2964 7.870445 CCTAATTTTCAAAGGAACATTCGGAAA 59.130 33.333 0.00 0.00 37.84 3.13
2900 2965 7.231722 TCCTAATTTTCAAAGGAACATTCGGAA 59.768 33.333 6.95 0.00 39.83 4.30
2902 2967 6.919721 TCCTAATTTTCAAAGGAACATTCGG 58.080 36.000 0.00 0.00 37.37 4.30
2941 3014 9.733556 TCATTAACTGGTCACATTATTACAAGT 57.266 29.630 0.00 0.00 0.00 3.16
2968 3041 6.262720 CCATGTTTTGTGTGGAAATTGGAATT 59.737 34.615 0.00 0.00 34.94 2.17
2983 3056 2.428890 TCGCAAAGGTTCCATGTTTTGT 59.571 40.909 0.00 0.00 34.04 2.83
2991 3064 3.353836 GCGCTCGCAAAGGTTCCA 61.354 61.111 9.59 0.00 41.49 3.53
3019 3092 3.865745 GTCAATCTCATACCTTGTGTCGG 59.134 47.826 0.00 0.00 0.00 4.79
3029 3102 3.049206 GCTCGCTCTGTCAATCTCATAC 58.951 50.000 0.00 0.00 0.00 2.39
3079 3152 1.070601 CATCATGGATGGCTACGGACA 59.929 52.381 0.00 0.00 36.51 4.02
3082 3155 0.035881 AGCATCATGGATGGCTACGG 59.964 55.000 8.18 0.00 40.10 4.02
3141 3214 1.379309 TTTCAACTATGGCCGGGGC 60.379 57.895 14.65 14.65 41.06 5.80
3168 3241 0.251787 TGGTGCAGGAGCTAGAGACA 60.252 55.000 0.00 0.00 42.74 3.41
3181 3254 0.467290 GTCAAGGAAACCCTGGTGCA 60.467 55.000 0.00 0.00 33.44 4.57
3259 3332 6.869206 AAGACCACACATACAATACCTAGT 57.131 37.500 0.00 0.00 0.00 2.57
3332 3407 1.338107 TGATCTGTCACTGAACGGGT 58.662 50.000 0.00 0.00 0.00 5.28
3342 3417 2.833943 ACTGGCTATGTGTGATCTGTCA 59.166 45.455 0.00 0.00 0.00 3.58
3343 3418 3.533606 ACTGGCTATGTGTGATCTGTC 57.466 47.619 0.00 0.00 0.00 3.51
3344 3419 3.677148 CGAACTGGCTATGTGTGATCTGT 60.677 47.826 0.00 0.00 0.00 3.41
3345 3420 2.862536 CGAACTGGCTATGTGTGATCTG 59.137 50.000 0.00 0.00 0.00 2.90
3346 3421 2.760650 TCGAACTGGCTATGTGTGATCT 59.239 45.455 0.00 0.00 0.00 2.75
3347 3422 3.165058 TCGAACTGGCTATGTGTGATC 57.835 47.619 0.00 0.00 0.00 2.92
3348 3423 3.610040 TTCGAACTGGCTATGTGTGAT 57.390 42.857 0.00 0.00 0.00 3.06
3349 3424 3.610040 ATTCGAACTGGCTATGTGTGA 57.390 42.857 0.00 0.00 0.00 3.58
3350 3425 3.935203 AGAATTCGAACTGGCTATGTGTG 59.065 43.478 0.00 0.00 0.00 3.82
3351 3426 4.207891 AGAATTCGAACTGGCTATGTGT 57.792 40.909 0.00 0.00 0.00 3.72
3352 3427 5.149054 GAAGAATTCGAACTGGCTATGTG 57.851 43.478 0.00 0.00 34.17 3.21
3367 3442 4.641541 TGATTCGTGGCATGATGAAGAATT 59.358 37.500 10.74 0.00 0.00 2.17
3368 3443 4.036027 GTGATTCGTGGCATGATGAAGAAT 59.964 41.667 10.74 0.00 0.00 2.40
3369 3444 3.374988 GTGATTCGTGGCATGATGAAGAA 59.625 43.478 10.74 0.00 0.00 2.52
3370 3445 2.938451 GTGATTCGTGGCATGATGAAGA 59.062 45.455 10.74 0.00 0.00 2.87
3371 3446 2.032550 GGTGATTCGTGGCATGATGAAG 59.967 50.000 10.74 0.00 0.00 3.02
3372 3447 2.016318 GGTGATTCGTGGCATGATGAA 58.984 47.619 10.74 3.68 0.00 2.57
3373 3448 1.065564 TGGTGATTCGTGGCATGATGA 60.066 47.619 10.74 0.00 0.00 2.92
3405 3480 2.100584 AGAGAGGATTCGTGAGACATGC 59.899 50.000 0.00 0.00 41.84 4.06
3478 3714 0.825840 GAGAGGGAGAGGGATCCGTG 60.826 65.000 12.68 0.00 40.56 4.94
3480 3716 1.228737 GGAGAGGGAGAGGGATCCG 60.229 68.421 5.45 0.00 40.56 4.18
3534 3770 8.202137 CCAACTAGAATTAATTAACCGGAGAGA 58.798 37.037 9.46 0.00 0.00 3.10
3565 3801 0.037590 AAAATGCCACGCCACTCCTA 59.962 50.000 0.00 0.00 0.00 2.94
3571 3807 1.079956 GATGCAAAATGCCACGCCA 60.080 52.632 0.00 0.00 44.23 5.69
3583 3819 3.755905 TCCGATTAAAACAGCTGATGCAA 59.244 39.130 23.35 9.26 42.74 4.08
3613 3849 3.454719 TCATGAAGGAATTGCTGGGAA 57.545 42.857 0.00 0.00 0.00 3.97
3614 3850 3.454719 TTCATGAAGGAATTGCTGGGA 57.545 42.857 3.38 0.00 0.00 4.37
3619 3855 3.129287 ACCGTGATTCATGAAGGAATTGC 59.871 43.478 14.54 0.00 37.61 3.56
3620 3856 4.637534 AGACCGTGATTCATGAAGGAATTG 59.362 41.667 14.54 3.56 37.61 2.32
3628 3864 4.520874 GGAGATAGAGACCGTGATTCATGA 59.479 45.833 7.46 0.00 0.00 3.07
3637 3873 2.777459 AATGGGGAGATAGAGACCGT 57.223 50.000 0.00 0.00 0.00 4.83
3641 3877 4.777896 CCCGAATTAATGGGGAGATAGAGA 59.222 45.833 16.48 0.00 44.10 3.10
3642 3878 4.777896 TCCCGAATTAATGGGGAGATAGAG 59.222 45.833 19.01 0.00 44.99 2.43
3643 3879 4.758822 TCCCGAATTAATGGGGAGATAGA 58.241 43.478 19.01 1.85 44.99 1.98
3662 3898 3.682292 GAGTGGACCGGTGCATCCC 62.682 68.421 32.24 19.07 33.69 3.85
3674 3910 5.483937 TGCCTCAAGATTACTAAAGAGTGGA 59.516 40.000 0.00 0.00 36.28 4.02
3677 3913 6.613153 AGTGCCTCAAGATTACTAAAGAGT 57.387 37.500 0.00 0.00 39.92 3.24
3685 3921 9.508567 GAAATCAATTAAGTGCCTCAAGATTAC 57.491 33.333 0.00 0.00 0.00 1.89
3692 3928 7.028962 CGATTTGAAATCAATTAAGTGCCTCA 58.971 34.615 17.14 0.00 35.55 3.86
3713 3949 7.915397 GTCACCAATTTATAAATGTCTGCGATT 59.085 33.333 11.42 0.00 0.00 3.34
3746 3982 1.732259 GTACCACATCGCTCCTTTGTG 59.268 52.381 0.00 0.00 40.29 3.33
3747 3983 1.623811 AGTACCACATCGCTCCTTTGT 59.376 47.619 0.00 0.00 0.00 2.83
3776 4012 6.295180 GGACTTATATTTAGGAACGGAGGGAG 60.295 46.154 0.00 0.00 0.00 4.30
3777 4013 5.541484 GGACTTATATTTAGGAACGGAGGGA 59.459 44.000 0.00 0.00 0.00 4.20
3778 4014 5.543020 AGGACTTATATTTAGGAACGGAGGG 59.457 44.000 0.00 0.00 0.00 4.30
3779 4015 6.667558 AGGACTTATATTTAGGAACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
3781 4017 7.427989 ACAAGGACTTATATTTAGGAACGGA 57.572 36.000 0.00 0.00 0.00 4.69
3782 4018 8.636213 TCTACAAGGACTTATATTTAGGAACGG 58.364 37.037 0.00 0.00 0.00 4.44
3783 4019 9.680315 CTCTACAAGGACTTATATTTAGGAACG 57.320 37.037 0.00 0.00 0.00 3.95
3795 4031 8.696374 CCATACTGAAATCTCTACAAGGACTTA 58.304 37.037 0.00 0.00 0.00 2.24
3796 4032 7.400339 TCCATACTGAAATCTCTACAAGGACTT 59.600 37.037 0.00 0.00 0.00 3.01
3797 4033 6.897966 TCCATACTGAAATCTCTACAAGGACT 59.102 38.462 0.00 0.00 0.00 3.85
3798 4034 7.113658 TCCATACTGAAATCTCTACAAGGAC 57.886 40.000 0.00 0.00 0.00 3.85
3799 4035 7.565029 TGATCCATACTGAAATCTCTACAAGGA 59.435 37.037 0.00 0.00 0.00 3.36
3800 4036 7.655328 GTGATCCATACTGAAATCTCTACAAGG 59.345 40.741 0.00 0.00 0.00 3.61
3801 4037 8.200120 TGTGATCCATACTGAAATCTCTACAAG 58.800 37.037 0.00 0.00 0.00 3.16
3802 4038 8.078060 TGTGATCCATACTGAAATCTCTACAA 57.922 34.615 0.00 0.00 0.00 2.41
3803 4039 7.660030 TGTGATCCATACTGAAATCTCTACA 57.340 36.000 0.00 0.00 0.00 2.74
3817 4053 8.272173 TCTAGATACATCCGTATGTGATCCATA 58.728 37.037 3.56 0.00 45.99 2.74
3818 4054 7.119387 TCTAGATACATCCGTATGTGATCCAT 58.881 38.462 3.56 0.00 45.99 3.41
3819 4055 6.481643 TCTAGATACATCCGTATGTGATCCA 58.518 40.000 3.56 0.00 45.99 3.41
3820 4056 7.421599 CATCTAGATACATCCGTATGTGATCC 58.578 42.308 4.54 0.00 45.99 3.36
3821 4057 6.915300 GCATCTAGATACATCCGTATGTGATC 59.085 42.308 4.54 3.74 45.99 2.92
3822 4058 6.378280 TGCATCTAGATACATCCGTATGTGAT 59.622 38.462 4.54 0.00 45.99 3.06
3823 4059 5.710099 TGCATCTAGATACATCCGTATGTGA 59.290 40.000 4.54 0.00 45.99 3.58
3824 4060 5.954335 TGCATCTAGATACATCCGTATGTG 58.046 41.667 4.54 0.00 45.99 3.21
3826 4062 8.484641 AAAATGCATCTAGATACATCCGTATG 57.515 34.615 17.09 0.00 38.48 2.39
3827 4063 9.809096 CTAAAATGCATCTAGATACATCCGTAT 57.191 33.333 17.09 0.85 41.16 3.06
3828 4064 9.020731 TCTAAAATGCATCTAGATACATCCGTA 57.979 33.333 17.09 9.71 0.00 4.02
3829 4065 7.896811 TCTAAAATGCATCTAGATACATCCGT 58.103 34.615 17.09 9.18 0.00 4.69
3830 4066 8.031864 ACTCTAAAATGCATCTAGATACATCCG 58.968 37.037 17.09 7.74 0.00 4.18
3840 4076 9.574458 GCGAATCTATACTCTAAAATGCATCTA 57.426 33.333 0.00 0.00 0.00 1.98
3841 4077 8.310382 AGCGAATCTATACTCTAAAATGCATCT 58.690 33.333 0.00 0.00 0.00 2.90
3842 4078 8.472683 AGCGAATCTATACTCTAAAATGCATC 57.527 34.615 0.00 0.00 0.00 3.91
3843 4079 8.090831 TGAGCGAATCTATACTCTAAAATGCAT 58.909 33.333 0.00 0.00 0.00 3.96
3844 4080 7.433680 TGAGCGAATCTATACTCTAAAATGCA 58.566 34.615 0.00 0.00 0.00 3.96
3845 4081 7.875316 TGAGCGAATCTATACTCTAAAATGC 57.125 36.000 0.00 0.00 0.00 3.56
3849 4085 8.765219 GCAAAATGAGCGAATCTATACTCTAAA 58.235 33.333 0.00 0.00 0.00 1.85
3850 4086 8.144478 AGCAAAATGAGCGAATCTATACTCTAA 58.856 33.333 0.00 0.00 37.01 2.10
3851 4087 7.661968 AGCAAAATGAGCGAATCTATACTCTA 58.338 34.615 0.00 0.00 37.01 2.43
3852 4088 6.520272 AGCAAAATGAGCGAATCTATACTCT 58.480 36.000 0.00 0.00 37.01 3.24
3853 4089 6.128688 GGAGCAAAATGAGCGAATCTATACTC 60.129 42.308 0.00 0.00 37.01 2.59
3854 4090 5.698545 GGAGCAAAATGAGCGAATCTATACT 59.301 40.000 0.00 0.00 37.01 2.12
3855 4091 5.388890 CGGAGCAAAATGAGCGAATCTATAC 60.389 44.000 0.00 0.00 37.01 1.47
3856 4092 4.686091 CGGAGCAAAATGAGCGAATCTATA 59.314 41.667 0.00 0.00 37.01 1.31
3857 4093 3.496130 CGGAGCAAAATGAGCGAATCTAT 59.504 43.478 0.00 0.00 37.01 1.98
3858 4094 2.866156 CGGAGCAAAATGAGCGAATCTA 59.134 45.455 0.00 0.00 37.01 1.98
3859 4095 1.667724 CGGAGCAAAATGAGCGAATCT 59.332 47.619 0.00 0.00 37.01 2.40
3860 4096 1.398390 ACGGAGCAAAATGAGCGAATC 59.602 47.619 0.00 0.00 37.01 2.52
3861 4097 1.453155 ACGGAGCAAAATGAGCGAAT 58.547 45.000 0.00 0.00 37.01 3.34
3862 4098 2.087501 TACGGAGCAAAATGAGCGAA 57.912 45.000 0.00 0.00 37.01 4.70
3863 4099 1.933181 CATACGGAGCAAAATGAGCGA 59.067 47.619 0.00 0.00 37.01 4.93
3864 4100 1.665679 ACATACGGAGCAAAATGAGCG 59.334 47.619 0.00 0.00 37.01 5.03
3865 4101 2.223340 CCACATACGGAGCAAAATGAGC 60.223 50.000 0.00 0.00 0.00 4.26
3866 4102 3.009723 ACCACATACGGAGCAAAATGAG 58.990 45.455 0.00 0.00 0.00 2.90
3867 4103 3.066291 ACCACATACGGAGCAAAATGA 57.934 42.857 0.00 0.00 0.00 2.57
3868 4104 3.190327 TGAACCACATACGGAGCAAAATG 59.810 43.478 0.00 0.00 0.00 2.32
3869 4105 3.417101 TGAACCACATACGGAGCAAAAT 58.583 40.909 0.00 0.00 0.00 1.82
3870 4106 2.852449 TGAACCACATACGGAGCAAAA 58.148 42.857 0.00 0.00 0.00 2.44
3871 4107 2.552599 TGAACCACATACGGAGCAAA 57.447 45.000 0.00 0.00 0.00 3.68
3872 4108 2.779755 ATGAACCACATACGGAGCAA 57.220 45.000 0.00 0.00 37.46 3.91
3873 4109 2.764010 ACTATGAACCACATACGGAGCA 59.236 45.455 0.00 0.00 40.07 4.26
3874 4110 3.123804 CACTATGAACCACATACGGAGC 58.876 50.000 0.00 0.00 40.07 4.70
3875 4111 4.649088 TCACTATGAACCACATACGGAG 57.351 45.455 0.00 0.00 40.07 4.63
3876 4112 5.408880 TTTCACTATGAACCACATACGGA 57.591 39.130 0.00 0.00 35.89 4.69
3877 4113 6.049149 AGATTTCACTATGAACCACATACGG 58.951 40.000 0.00 0.00 35.89 4.02
3878 4114 6.980978 AGAGATTTCACTATGAACCACATACG 59.019 38.462 0.00 0.00 35.89 3.06
3879 4115 7.439655 GGAGAGATTTCACTATGAACCACATAC 59.560 40.741 0.00 0.00 35.89 2.39
3880 4116 7.125659 TGGAGAGATTTCACTATGAACCACATA 59.874 37.037 0.00 0.00 35.89 2.29
3881 4117 6.070021 TGGAGAGATTTCACTATGAACCACAT 60.070 38.462 0.00 0.00 35.89 3.21
3882 4118 5.248248 TGGAGAGATTTCACTATGAACCACA 59.752 40.000 0.00 0.00 35.89 4.17
3883 4119 5.734720 TGGAGAGATTTCACTATGAACCAC 58.265 41.667 0.00 0.00 35.89 4.16
3884 4120 6.373005 TTGGAGAGATTTCACTATGAACCA 57.627 37.500 0.00 0.00 35.89 3.67
3885 4121 7.065204 GTCTTTGGAGAGATTTCACTATGAACC 59.935 40.741 0.00 0.00 32.04 3.62
3886 4122 7.821846 AGTCTTTGGAGAGATTTCACTATGAAC 59.178 37.037 0.00 0.00 32.04 3.18
3887 4123 7.911651 AGTCTTTGGAGAGATTTCACTATGAA 58.088 34.615 0.00 0.00 31.02 2.57
3888 4124 7.487822 AGTCTTTGGAGAGATTTCACTATGA 57.512 36.000 0.00 0.00 31.07 2.15
3889 4125 7.605691 ACAAGTCTTTGGAGAGATTTCACTATG 59.394 37.037 0.00 0.00 38.66 2.23
3890 4126 7.684529 ACAAGTCTTTGGAGAGATTTCACTAT 58.315 34.615 0.00 0.00 38.66 2.12
3891 4127 7.067496 ACAAGTCTTTGGAGAGATTTCACTA 57.933 36.000 0.00 0.00 38.66 2.74
3892 4128 5.934781 ACAAGTCTTTGGAGAGATTTCACT 58.065 37.500 0.00 0.00 38.66 3.41
3893 4129 7.913674 ATACAAGTCTTTGGAGAGATTTCAC 57.086 36.000 0.00 0.00 38.66 3.18
3894 4130 8.924511 AAATACAAGTCTTTGGAGAGATTTCA 57.075 30.769 0.00 0.00 38.66 2.69
3896 4132 9.454859 CCTAAATACAAGTCTTTGGAGAGATTT 57.545 33.333 0.00 0.00 38.66 2.17
3897 4133 8.826765 TCCTAAATACAAGTCTTTGGAGAGATT 58.173 33.333 0.00 0.00 38.66 2.40
3898 4134 8.380742 TCCTAAATACAAGTCTTTGGAGAGAT 57.619 34.615 0.00 0.00 38.66 2.75
3899 4135 7.792364 TCCTAAATACAAGTCTTTGGAGAGA 57.208 36.000 0.00 0.00 38.66 3.10
3900 4136 7.063544 CGTTCCTAAATACAAGTCTTTGGAGAG 59.936 40.741 0.00 0.00 38.66 3.20
3901 4137 6.872020 CGTTCCTAAATACAAGTCTTTGGAGA 59.128 38.462 0.00 0.00 38.66 3.71
3902 4138 6.092259 CCGTTCCTAAATACAAGTCTTTGGAG 59.908 42.308 0.00 0.00 38.66 3.86
3903 4139 5.935789 CCGTTCCTAAATACAAGTCTTTGGA 59.064 40.000 0.00 0.00 38.66 3.53
3904 4140 5.935789 TCCGTTCCTAAATACAAGTCTTTGG 59.064 40.000 0.00 0.00 38.66 3.28
3905 4141 6.092259 CCTCCGTTCCTAAATACAAGTCTTTG 59.908 42.308 0.00 0.00 40.24 2.77
3906 4142 6.171213 CCTCCGTTCCTAAATACAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
3907 4143 5.338137 CCCTCCGTTCCTAAATACAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
3908 4144 4.161754 CCCTCCGTTCCTAAATACAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
3909 4145 4.161001 TCCCTCCGTTCCTAAATACAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
3910 4146 4.098894 TCCCTCCGTTCCTAAATACAAGT 58.901 43.478 0.00 0.00 0.00 3.16
3911 4147 4.161754 ACTCCCTCCGTTCCTAAATACAAG 59.838 45.833 0.00 0.00 0.00 3.16
3912 4148 4.098894 ACTCCCTCCGTTCCTAAATACAA 58.901 43.478 0.00 0.00 0.00 2.41
3913 4149 3.716431 ACTCCCTCCGTTCCTAAATACA 58.284 45.455 0.00 0.00 0.00 2.29
3914 4150 5.859205 TTACTCCCTCCGTTCCTAAATAC 57.141 43.478 0.00 0.00 0.00 1.89
3915 4151 7.255590 CGTATTTACTCCCTCCGTTCCTAAATA 60.256 40.741 0.00 0.00 0.00 1.40
3916 4152 5.970501 ATTTACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
3917 4153 5.163519 CGTATTTACTCCCTCCGTTCCTAAA 60.164 44.000 0.00 0.00 0.00 1.85
3918 4154 4.339247 CGTATTTACTCCCTCCGTTCCTAA 59.661 45.833 0.00 0.00 0.00 2.69
3919 4155 3.885297 CGTATTTACTCCCTCCGTTCCTA 59.115 47.826 0.00 0.00 0.00 2.94
3920 4156 2.692041 CGTATTTACTCCCTCCGTTCCT 59.308 50.000 0.00 0.00 0.00 3.36
3921 4157 2.689983 TCGTATTTACTCCCTCCGTTCC 59.310 50.000 0.00 0.00 0.00 3.62
3922 4158 4.376340 TTCGTATTTACTCCCTCCGTTC 57.624 45.455 0.00 0.00 0.00 3.95
3923 4159 4.498241 GTTTCGTATTTACTCCCTCCGTT 58.502 43.478 0.00 0.00 0.00 4.44
3924 4160 3.118992 GGTTTCGTATTTACTCCCTCCGT 60.119 47.826 0.00 0.00 0.00 4.69
3925 4161 3.131755 AGGTTTCGTATTTACTCCCTCCG 59.868 47.826 0.00 0.00 0.00 4.63
3926 4162 4.405036 AGAGGTTTCGTATTTACTCCCTCC 59.595 45.833 0.00 0.00 38.38 4.30
3927 4163 5.595257 AGAGGTTTCGTATTTACTCCCTC 57.405 43.478 0.00 0.00 37.98 4.30
3928 4164 6.370186 AAAGAGGTTTCGTATTTACTCCCT 57.630 37.500 0.00 0.00 0.00 4.20
3929 4165 7.040892 ACAAAAAGAGGTTTCGTATTTACTCCC 60.041 37.037 0.00 0.00 0.00 4.30
3930 4166 7.868775 ACAAAAAGAGGTTTCGTATTTACTCC 58.131 34.615 0.00 0.00 0.00 3.85
3931 4167 9.726232 AAACAAAAAGAGGTTTCGTATTTACTC 57.274 29.630 0.00 0.00 32.00 2.59
3935 4171 8.865978 GTGAAAACAAAAAGAGGTTTCGTATTT 58.134 29.630 0.00 0.00 36.28 1.40
3936 4172 8.030106 TGTGAAAACAAAAAGAGGTTTCGTATT 58.970 29.630 0.00 0.00 36.28 1.89
3937 4173 7.540299 TGTGAAAACAAAAAGAGGTTTCGTAT 58.460 30.769 0.00 0.00 36.28 3.06
3938 4174 6.910995 TGTGAAAACAAAAAGAGGTTTCGTA 58.089 32.000 0.00 0.00 36.28 3.43
3939 4175 5.774630 TGTGAAAACAAAAAGAGGTTTCGT 58.225 33.333 0.00 0.00 36.28 3.85
3940 4176 6.698359 TTGTGAAAACAAAAAGAGGTTTCG 57.302 33.333 0.00 0.00 36.28 3.46
3943 4179 9.883142 TCATATTTGTGAAAACAAAAAGAGGTT 57.117 25.926 7.99 0.00 42.04 3.50
3944 4180 9.533253 CTCATATTTGTGAAAACAAAAAGAGGT 57.467 29.630 7.99 0.00 42.04 3.85
3945 4181 9.533253 ACTCATATTTGTGAAAACAAAAAGAGG 57.467 29.630 21.50 7.89 42.04 3.69
3982 4218 5.677319 ATCAAGTTTCCTTAGGTCGATCA 57.323 39.130 0.00 0.00 0.00 2.92
3990 4226 5.352569 CACACCTGCTATCAAGTTTCCTTAG 59.647 44.000 0.00 0.00 0.00 2.18
4005 4241 1.271597 GGGATCAAACTCACACCTGCT 60.272 52.381 0.00 0.00 0.00 4.24
4019 4256 5.715439 ATGGTTGAAGATACTTGGGATCA 57.285 39.130 0.00 0.00 0.00 2.92
4026 4263 3.016736 CCGGCAATGGTTGAAGATACTT 58.983 45.455 0.00 0.00 0.00 2.24
4027 4264 2.238646 TCCGGCAATGGTTGAAGATACT 59.761 45.455 0.00 0.00 0.00 2.12
4034 4271 0.246086 GCAAATCCGGCAATGGTTGA 59.754 50.000 0.00 0.00 0.00 3.18
4039 4276 0.179129 GGTCAGCAAATCCGGCAATG 60.179 55.000 0.00 0.00 0.00 2.82
4040 4277 1.656818 CGGTCAGCAAATCCGGCAAT 61.657 55.000 0.00 0.00 40.49 3.56
4144 4386 6.414732 CCTGATGTTTCTAAGTATCAACCCA 58.585 40.000 0.00 0.00 0.00 4.51
4205 4610 8.373220 TGCTAGTTACTAATAAAGGGAATAGGC 58.627 37.037 0.00 0.00 0.00 3.93
4308 4719 2.303175 TCTTTGTTTTGGCCGTAGCTT 58.697 42.857 0.00 0.00 39.73 3.74
4319 4730 7.296628 TGTAGGCAAATACCATCTTTGTTTT 57.703 32.000 0.00 0.00 36.26 2.43
4333 4744 2.035832 ACTTGCGCTTTTGTAGGCAAAT 59.964 40.909 9.73 0.00 43.26 2.32
4499 4910 5.112686 AGAGTGCATTATCCGTCTTTCTTC 58.887 41.667 0.00 0.00 0.00 2.87
4521 4932 8.589338 ACTATATAGGGTGCAATCTTAGTCAAG 58.411 37.037 14.25 0.00 0.00 3.02
4685 5100 9.920946 ATATTTCTGACATTAAACCCACAGTAT 57.079 29.630 0.00 0.00 0.00 2.12
4842 5258 2.290641 CCTCCGCAATTAGAAAATCGGG 59.709 50.000 0.00 0.00 34.70 5.14
4929 5362 0.107848 CCACGCGGGGTCTAGAAAAT 60.108 55.000 22.33 0.00 0.00 1.82
5042 5475 2.628696 CCAGTCGCCAGCATTGCAA 61.629 57.895 11.91 0.00 0.00 4.08
5077 5510 0.779997 ATGGCCCTTTTCTCCACAGT 59.220 50.000 0.00 0.00 31.94 3.55
5158 5591 6.715347 AAAGGTAACATCACAAGAAAGCTT 57.285 33.333 0.00 0.00 41.41 3.74
5164 5597 7.523052 GCACCAATAAAAGGTAACATCACAAGA 60.523 37.037 0.00 0.00 37.23 3.02
5186 5619 6.544038 AAAGCTAAAAATCAAATGTGCACC 57.456 33.333 15.69 0.00 0.00 5.01
5461 5897 7.606073 GGTAAACCTATTGCATTTGACCAAATT 59.394 33.333 5.32 0.00 38.84 1.82
5667 6108 9.808869 TATCACCAGATACCTGCTCTCTACAGG 62.809 48.148 8.23 8.23 46.02 4.00
5698 6139 7.986085 GTAGCATCCATCAAATTATGGTACT 57.014 36.000 14.43 9.80 45.67 2.73
5701 6142 6.604171 TCAGTAGCATCCATCAAATTATGGT 58.396 36.000 7.05 1.25 45.67 3.55
5857 6300 0.183492 TGCCAGGAAAGCAACTCAGT 59.817 50.000 0.00 0.00 37.28 3.41
5873 6316 6.545504 ACATTGATGATTAACGATACTGCC 57.454 37.500 0.00 0.00 0.00 4.85
5944 6390 0.112995 TTTCCTCATGGCCAACAGCT 59.887 50.000 10.96 0.00 43.05 4.24
5956 6402 0.762418 TTCTTGGTCGCCTTTCCTCA 59.238 50.000 0.00 0.00 0.00 3.86
6060 6506 2.434428 CATTGACTTCAGCTTGCTCCT 58.566 47.619 0.00 0.00 0.00 3.69
6124 6570 4.175337 GTGGCTGGGCGGCTATCA 62.175 66.667 9.56 1.34 39.32 2.15
6136 6609 0.610232 GGCTCATTCTGTTGGTGGCT 60.610 55.000 0.00 0.00 0.00 4.75
6137 6610 1.598701 GGGCTCATTCTGTTGGTGGC 61.599 60.000 0.00 0.00 0.00 5.01
6138 6611 0.038744 AGGGCTCATTCTGTTGGTGG 59.961 55.000 0.00 0.00 0.00 4.61
6139 6612 2.636830 CTAGGGCTCATTCTGTTGGTG 58.363 52.381 0.00 0.00 0.00 4.17
6140 6613 1.065126 GCTAGGGCTCATTCTGTTGGT 60.065 52.381 0.00 0.00 35.22 3.67
6141 6614 1.673168 GCTAGGGCTCATTCTGTTGG 58.327 55.000 0.00 0.00 35.22 3.77
6142 6615 1.673168 GGCTAGGGCTCATTCTGTTG 58.327 55.000 0.00 0.00 38.73 3.33
6143 6616 0.548510 GGGCTAGGGCTCATTCTGTT 59.451 55.000 0.00 0.00 39.12 3.16
6144 6617 1.348775 GGGGCTAGGGCTCATTCTGT 61.349 60.000 0.00 0.00 41.58 3.41
6145 6618 1.059006 AGGGGCTAGGGCTCATTCTG 61.059 60.000 0.00 0.00 41.58 3.02
6146 6619 1.059006 CAGGGGCTAGGGCTCATTCT 61.059 60.000 0.00 0.00 41.58 2.40
6147 6620 1.453669 CAGGGGCTAGGGCTCATTC 59.546 63.158 0.00 0.00 41.58 2.67
6148 6621 2.081161 CCAGGGGCTAGGGCTCATT 61.081 63.158 0.00 0.00 41.58 2.57
6149 6622 2.449322 CCAGGGGCTAGGGCTCAT 60.449 66.667 0.00 0.00 41.58 2.90
6150 6623 4.823732 CCCAGGGGCTAGGGCTCA 62.824 72.222 0.00 0.00 41.58 4.26
6151 6624 4.499116 TCCCAGGGGCTAGGGCTC 62.499 72.222 5.33 0.00 45.07 4.70
6152 6625 4.505970 CTCCCAGGGGCTAGGGCT 62.506 72.222 5.33 0.00 45.07 5.19
6153 6626 4.825679 ACTCCCAGGGGCTAGGGC 62.826 72.222 5.33 0.00 45.07 5.19
6154 6627 2.628187 ATCACTCCCAGGGGCTAGGG 62.628 65.000 5.33 0.00 46.90 3.53
6155 6628 1.074167 ATCACTCCCAGGGGCTAGG 60.074 63.158 5.33 0.00 34.68 3.02
6156 6629 1.414061 CCATCACTCCCAGGGGCTAG 61.414 65.000 5.33 0.00 34.68 3.42
6157 6630 1.384502 CCATCACTCCCAGGGGCTA 60.385 63.158 5.33 0.00 34.68 3.93
6158 6631 2.693864 CCATCACTCCCAGGGGCT 60.694 66.667 5.33 0.00 34.68 5.19
6159 6632 4.512914 GCCATCACTCCCAGGGGC 62.513 72.222 5.33 0.00 34.68 5.80
6160 6633 4.181010 CGCCATCACTCCCAGGGG 62.181 72.222 5.33 0.92 0.00 4.79
6161 6634 1.987807 ATTCGCCATCACTCCCAGGG 61.988 60.000 0.00 0.00 0.00 4.45
6162 6635 0.816825 CATTCGCCATCACTCCCAGG 60.817 60.000 0.00 0.00 0.00 4.45
6205 6678 5.220548 CCAAGAGACGATGCAACAAGATTAG 60.221 44.000 0.00 0.00 0.00 1.73
6331 6813 4.630894 ACACACGTCAACATTTGTCAAT 57.369 36.364 0.00 0.00 0.00 2.57
6378 6860 0.248296 TGTCGCAACCGCAAAAAGAC 60.248 50.000 0.00 0.00 38.40 3.01
6379 6861 0.452184 TTGTCGCAACCGCAAAAAGA 59.548 45.000 0.00 0.00 38.40 2.52
6380 6862 1.189884 CATTGTCGCAACCGCAAAAAG 59.810 47.619 0.00 0.00 38.40 2.27
6394 6877 6.422400 GCTAGCCAAGTCTAGATAACATTGTC 59.578 42.308 2.29 0.00 38.61 3.18
6446 6929 3.290948 AGGGGCAACGATTATTTAGCA 57.709 42.857 0.00 0.00 37.60 3.49
6457 6940 0.885596 TTTACGACCAAGGGGCAACG 60.886 55.000 0.00 0.00 37.90 4.10
6468 6951 5.392487 GGGAGTAGAACAGTACTTTACGACC 60.392 48.000 0.00 4.16 33.18 4.79
6469 6952 5.414144 AGGGAGTAGAACAGTACTTTACGAC 59.586 44.000 0.00 0.00 33.18 4.34
6477 6960 2.682352 GACGGAGGGAGTAGAACAGTAC 59.318 54.545 0.00 0.00 0.00 2.73
6514 6997 4.007659 GTCCCATGATGTAAGACGGTTTT 58.992 43.478 0.00 0.00 0.00 2.43
6515 6998 3.606687 GTCCCATGATGTAAGACGGTTT 58.393 45.455 0.00 0.00 0.00 3.27
6516 6999 2.418197 CGTCCCATGATGTAAGACGGTT 60.418 50.000 16.98 0.00 44.86 4.44
6517 7000 1.136305 CGTCCCATGATGTAAGACGGT 59.864 52.381 16.98 0.00 44.86 4.83
6518 7001 1.852942 CGTCCCATGATGTAAGACGG 58.147 55.000 16.98 0.55 44.86 4.79
6520 7003 2.224066 CCTCCGTCCCATGATGTAAGAC 60.224 54.545 0.00 0.00 0.00 3.01
6522 7005 1.070758 CCCTCCGTCCCATGATGTAAG 59.929 57.143 0.00 0.00 0.00 2.34
6527 7010 0.561184 TACTCCCTCCGTCCCATGAT 59.439 55.000 0.00 0.00 0.00 2.45
6528 7011 0.396695 GTACTCCCTCCGTCCCATGA 60.397 60.000 0.00 0.00 0.00 3.07
6824 7564 5.182001 GCATTGTTTCTGTGTCACTAAGGAT 59.818 40.000 4.27 0.00 0.00 3.24
6875 7615 0.107312 ATGCCTTCTCGCAGCTGATT 60.107 50.000 20.43 0.00 43.26 2.57
6926 7666 3.345808 GCAGACGAAAGCCGCACA 61.346 61.111 0.00 0.00 43.32 4.57
6934 7674 1.275471 CGCAGACGAAGCAGACGAAA 61.275 55.000 0.00 0.00 43.93 3.46
6956 7696 2.733945 GGCTCTCTGGAGATCCGC 59.266 66.667 4.97 3.86 41.86 5.54
6958 7698 0.975887 GATGGGCTCTCTGGAGATCC 59.024 60.000 10.92 10.92 41.70 3.36
7117 7857 0.039437 GGTCGAGAAGTGTCTTGCGA 60.039 55.000 0.00 0.00 35.46 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.