Multiple sequence alignment - TraesCS1B01G129300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G129300 chr1B 100.000 5589 0 0 1 5589 159383892 159389480 0.000000e+00 10322.0
1 TraesCS1B01G129300 chr1B 94.602 352 6 2 5052 5391 159394054 159394404 2.960000e-147 532.0
2 TraesCS1B01G129300 chr1B 98.246 114 0 2 4935 5048 159394399 159394510 1.230000e-46 198.0
3 TraesCS1B01G129300 chr1B 77.487 191 35 7 5353 5539 149518977 149519163 2.130000e-19 108.0
4 TraesCS1B01G129300 chr1D 94.216 4080 157 41 285 4299 107221038 107216973 0.000000e+00 6154.0
5 TraesCS1B01G129300 chr1D 97.122 278 8 0 4420 4697 107216892 107216615 2.360000e-128 470.0
6 TraesCS1B01G129300 chr1D 97.382 191 4 1 4858 5047 107216617 107216427 1.940000e-84 324.0
7 TraesCS1B01G129300 chr1A 94.665 3224 118 29 1123 4299 109986225 109983009 0.000000e+00 4951.0
8 TraesCS1B01G129300 chr1A 90.840 655 31 14 454 1081 109987095 109986443 0.000000e+00 850.0
9 TraesCS1B01G129300 chr1A 96.774 279 9 0 4419 4697 109982834 109982556 3.050000e-127 466.0
10 TraesCS1B01G129300 chr1A 94.444 198 7 3 4858 5051 109982558 109982361 9.100000e-78 302.0
11 TraesCS1B01G129300 chr1A 86.325 117 16 0 4742 4858 556182881 556182765 1.630000e-25 128.0
12 TraesCS1B01G129300 chr1A 92.188 64 4 1 3321 3383 582878662 582878599 7.710000e-14 89.8
13 TraesCS1B01G129300 chr6B 94.909 550 16 1 5052 5589 615018538 615019087 0.000000e+00 850.0
14 TraesCS1B01G129300 chr6B 93.732 351 10 1 5052 5390 615023279 615023629 2.990000e-142 516.0
15 TraesCS1B01G129300 chr6B 86.239 109 9 3 4702 4810 657645673 657645775 4.580000e-21 113.0
16 TraesCS1B01G129300 chr3B 94.727 550 17 1 5052 5589 494237173 494237722 0.000000e+00 845.0
17 TraesCS1B01G129300 chr3B 94.618 353 5 2 5052 5390 494254606 494254958 8.240000e-148 534.0
18 TraesCS1B01G129300 chr5B 89.091 440 21 5 5061 5476 677518441 677518005 6.420000e-144 521.0
19 TraesCS1B01G129300 chr2B 90.415 386 35 2 5206 5589 36986737 36987122 1.800000e-139 507.0
20 TraesCS1B01G129300 chrUn 87.333 450 20 5 5061 5476 331610029 331610475 1.090000e-131 481.0
21 TraesCS1B01G129300 chrUn 91.549 355 14 4 5052 5393 67319025 67318674 5.070000e-130 475.0
22 TraesCS1B01G129300 chrUn 92.500 80 5 1 320 399 79185699 79185621 4.580000e-21 113.0
23 TraesCS1B01G129300 chr2A 85.928 469 44 13 5137 5589 36661566 36662028 1.090000e-131 481.0
24 TraesCS1B01G129300 chr2A 82.353 153 24 2 4709 4858 94109529 94109681 4.540000e-26 130.0
25 TraesCS1B01G129300 chr6D 86.471 170 20 2 4697 4863 16850355 16850524 3.440000e-42 183.0
26 TraesCS1B01G129300 chr6D 82.635 167 20 8 4697 4858 434477997 434478159 7.550000e-29 139.0
27 TraesCS1B01G129300 chr6D 92.647 68 3 2 3316 3383 44098433 44098498 4.610000e-16 97.1
28 TraesCS1B01G129300 chr6D 89.583 48 5 0 499 546 454218223 454218270 1.680000e-05 62.1
29 TraesCS1B01G129300 chr7D 89.796 98 6 4 316 411 80458449 80458354 7.600000e-24 122.0
30 TraesCS1B01G129300 chr7D 93.846 65 3 1 3318 3381 428723279 428723343 4.610000e-16 97.1
31 TraesCS1B01G129300 chr5D 92.188 64 5 0 3320 3383 524501736 524501673 2.140000e-14 91.6
32 TraesCS1B01G129300 chr5D 88.889 72 4 3 3321 3391 489809848 489809780 9.980000e-13 86.1
33 TraesCS1B01G129300 chr3D 89.333 75 5 3 3312 3384 321889061 321889134 2.140000e-14 91.6
34 TraesCS1B01G129300 chr3A 89.333 75 1 6 3321 3388 581374771 581374697 2.770000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G129300 chr1B 159383892 159389480 5588 False 10322.00 10322 100.00000 1 5589 1 chr1B.!!$F2 5588
1 TraesCS1B01G129300 chr1D 107216427 107221038 4611 True 2316.00 6154 96.24000 285 5047 3 chr1D.!!$R1 4762
2 TraesCS1B01G129300 chr1A 109982361 109987095 4734 True 1642.25 4951 94.18075 454 5051 4 chr1A.!!$R3 4597
3 TraesCS1B01G129300 chr6B 615018538 615019087 549 False 850.00 850 94.90900 5052 5589 1 chr6B.!!$F1 537
4 TraesCS1B01G129300 chr3B 494237173 494237722 549 False 845.00 845 94.72700 5052 5589 1 chr3B.!!$F1 537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.036164 CACCACCTGGAATCAACCGA 59.964 55.000 0.00 0.00 38.94 4.69 F
216 217 0.036306 ACCACCTGGAATCAACCGAC 59.964 55.000 0.00 0.00 38.94 4.79 F
261 262 0.107945 AGCTCGGAGCAGAAATCACC 60.108 55.000 29.88 0.00 45.56 4.02 F
263 264 0.108615 CTCGGAGCAGAAATCACCGT 60.109 55.000 0.00 0.00 43.36 4.83 F
636 641 0.178992 TGATGGAAATCCGATGGCCC 60.179 55.000 0.00 0.00 39.43 5.80 F
976 996 0.325203 AGGAGAAGAGAGGAGCCCAC 60.325 60.000 0.00 0.00 0.00 4.61 F
1483 1694 0.803117 GAGGGTTTGGAGCGCTTTAC 59.197 55.000 13.26 6.01 0.00 2.01 F
2636 2851 1.140252 GTGGCGTTACAGGGATATGGT 59.860 52.381 0.00 0.00 0.00 3.55 F
3683 3929 1.108727 TTGGAGTTGCTGCTTGGTGG 61.109 55.000 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1793 2004 0.106918 TTGTGAAAGCGACCAACCCT 60.107 50.000 0.00 0.0 0.00 4.34 R
2110 2321 2.150397 AGTAGTCCGACACTGCAAAC 57.850 50.000 0.40 0.0 40.12 2.93 R
2241 2453 4.515944 ACACGAAACGAAATGGGAAATGTA 59.484 37.500 0.00 0.0 0.00 2.29 R
2314 2528 9.032624 AGTATGTACTACAAGGTTTCAGTATGT 57.967 33.333 0.00 0.0 33.74 2.29 R
2612 2827 2.279935 ATCCCTGTAACGCCACAAAA 57.720 45.000 0.00 0.0 0.00 2.44 R
2855 3070 3.260740 CTCTGATCCACAAAGAGCTGTC 58.739 50.000 0.00 0.0 31.71 3.51 R
3237 3452 3.341823 CTTTGTGTCTGCATTCCTAGCT 58.658 45.455 0.00 0.0 0.00 3.32 R
4040 4289 1.075374 ACCTTGCCCAAACTAGCATGA 59.925 47.619 0.00 0.0 39.11 3.07 R
4731 5060 0.110823 CCGCGTGTAACTGAAACAGC 60.111 55.000 4.92 0.0 34.37 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.045926 GCGAGCCTTGGACATGGT 60.046 61.111 0.00 0.00 0.00 3.55
18 19 2.401766 GCGAGCCTTGGACATGGTG 61.402 63.158 0.00 0.00 0.00 4.17
19 20 1.003355 CGAGCCTTGGACATGGTGT 60.003 57.895 0.00 0.00 0.00 4.16
20 21 1.300971 CGAGCCTTGGACATGGTGTG 61.301 60.000 0.00 0.00 0.00 3.82
21 22 0.036732 GAGCCTTGGACATGGTGTGA 59.963 55.000 0.00 0.00 0.00 3.58
22 23 0.478072 AGCCTTGGACATGGTGTGAA 59.522 50.000 0.00 0.00 0.00 3.18
23 24 0.883833 GCCTTGGACATGGTGTGAAG 59.116 55.000 0.00 0.00 0.00 3.02
24 25 0.883833 CCTTGGACATGGTGTGAAGC 59.116 55.000 0.00 0.00 0.00 3.86
25 26 0.518636 CTTGGACATGGTGTGAAGCG 59.481 55.000 0.00 0.00 0.00 4.68
26 27 0.179032 TTGGACATGGTGTGAAGCGT 60.179 50.000 0.00 0.00 0.00 5.07
27 28 0.179032 TGGACATGGTGTGAAGCGTT 60.179 50.000 0.00 0.00 0.00 4.84
28 29 0.238289 GGACATGGTGTGAAGCGTTG 59.762 55.000 0.00 0.00 0.00 4.10
29 30 0.944386 GACATGGTGTGAAGCGTTGT 59.056 50.000 0.00 0.00 0.00 3.32
30 31 0.662619 ACATGGTGTGAAGCGTTGTG 59.337 50.000 0.00 0.00 0.00 3.33
31 32 0.040157 CATGGTGTGAAGCGTTGTGG 60.040 55.000 0.00 0.00 0.00 4.17
32 33 1.795170 ATGGTGTGAAGCGTTGTGGC 61.795 55.000 0.00 0.00 0.00 5.01
33 34 2.331451 GTGTGAAGCGTTGTGGCC 59.669 61.111 0.00 0.00 0.00 5.36
34 35 3.276091 TGTGAAGCGTTGTGGCCG 61.276 61.111 0.00 0.00 0.00 6.13
35 36 2.970324 GTGAAGCGTTGTGGCCGA 60.970 61.111 0.00 0.00 0.00 5.54
36 37 2.203084 TGAAGCGTTGTGGCCGAA 60.203 55.556 0.00 0.00 0.00 4.30
37 38 2.250939 TGAAGCGTTGTGGCCGAAG 61.251 57.895 0.00 0.00 0.00 3.79
38 39 3.595108 GAAGCGTTGTGGCCGAAGC 62.595 63.158 0.00 0.30 38.76 3.86
48 49 2.345991 GCCGAAGCCACACTGGTA 59.654 61.111 0.00 0.00 40.46 3.25
49 50 1.741770 GCCGAAGCCACACTGGTAG 60.742 63.158 0.00 0.00 40.46 3.18
50 51 1.972198 CCGAAGCCACACTGGTAGA 59.028 57.895 0.00 0.00 40.46 2.59
51 52 0.108615 CCGAAGCCACACTGGTAGAG 60.109 60.000 0.00 0.00 40.46 2.43
52 53 0.108615 CGAAGCCACACTGGTAGAGG 60.109 60.000 0.00 0.00 40.46 3.69
53 54 1.267121 GAAGCCACACTGGTAGAGGA 58.733 55.000 0.00 0.00 40.46 3.71
54 55 0.977395 AAGCCACACTGGTAGAGGAC 59.023 55.000 0.00 0.00 40.46 3.85
55 56 1.215647 GCCACACTGGTAGAGGACG 59.784 63.158 0.00 0.00 40.46 4.79
56 57 1.533469 GCCACACTGGTAGAGGACGT 61.533 60.000 0.00 0.00 40.46 4.34
57 58 0.526662 CCACACTGGTAGAGGACGTC 59.473 60.000 7.13 7.13 31.35 4.34
58 59 0.168348 CACACTGGTAGAGGACGTCG 59.832 60.000 9.92 0.00 0.00 5.12
59 60 0.959372 ACACTGGTAGAGGACGTCGG 60.959 60.000 9.92 0.00 0.00 4.79
60 61 2.045131 ACTGGTAGAGGACGTCGGC 61.045 63.158 9.92 3.70 0.00 5.54
61 62 3.109612 CTGGTAGAGGACGTCGGCG 62.110 68.421 8.42 8.42 44.93 6.46
62 63 2.821366 GGTAGAGGACGTCGGCGA 60.821 66.667 20.03 4.99 42.00 5.54
63 64 2.401766 GGTAGAGGACGTCGGCGAA 61.402 63.158 20.03 0.00 42.00 4.70
64 65 1.226239 GTAGAGGACGTCGGCGAAC 60.226 63.158 20.03 8.43 42.00 3.95
65 66 2.401766 TAGAGGACGTCGGCGAACC 61.402 63.158 20.03 19.20 42.00 3.62
75 76 3.998672 GGCGAACCGAGGACACCA 61.999 66.667 0.00 0.00 0.00 4.17
76 77 2.432628 GCGAACCGAGGACACCAG 60.433 66.667 0.00 0.00 0.00 4.00
77 78 2.927580 GCGAACCGAGGACACCAGA 61.928 63.158 0.00 0.00 0.00 3.86
78 79 1.213013 CGAACCGAGGACACCAGAG 59.787 63.158 0.00 0.00 0.00 3.35
79 80 1.241990 CGAACCGAGGACACCAGAGA 61.242 60.000 0.00 0.00 0.00 3.10
80 81 0.966920 GAACCGAGGACACCAGAGAA 59.033 55.000 0.00 0.00 0.00 2.87
81 82 0.680061 AACCGAGGACACCAGAGAAC 59.320 55.000 0.00 0.00 0.00 3.01
82 83 1.213013 CCGAGGACACCAGAGAACG 59.787 63.158 0.00 0.00 0.00 3.95
83 84 1.444553 CGAGGACACCAGAGAACGC 60.445 63.158 0.00 0.00 0.00 4.84
84 85 1.666011 GAGGACACCAGAGAACGCA 59.334 57.895 0.00 0.00 0.00 5.24
85 86 0.389166 GAGGACACCAGAGAACGCAG 60.389 60.000 0.00 0.00 0.00 5.18
86 87 1.374758 GGACACCAGAGAACGCAGG 60.375 63.158 0.00 0.00 0.00 4.85
87 88 1.367840 GACACCAGAGAACGCAGGT 59.632 57.895 0.00 0.00 33.91 4.00
88 89 0.667792 GACACCAGAGAACGCAGGTC 60.668 60.000 0.00 0.00 30.44 3.85
89 90 1.374758 CACCAGAGAACGCAGGTCC 60.375 63.158 0.00 0.00 30.44 4.46
90 91 1.837051 ACCAGAGAACGCAGGTCCA 60.837 57.895 0.00 0.00 0.00 4.02
91 92 1.079543 CCAGAGAACGCAGGTCCAG 60.080 63.158 0.00 0.00 0.00 3.86
92 93 1.079543 CAGAGAACGCAGGTCCAGG 60.080 63.158 0.00 0.00 0.00 4.45
93 94 2.266055 GAGAACGCAGGTCCAGGG 59.734 66.667 0.00 0.00 0.00 4.45
94 95 2.526873 AGAACGCAGGTCCAGGGT 60.527 61.111 0.00 0.00 0.00 4.34
95 96 2.113243 GAGAACGCAGGTCCAGGGTT 62.113 60.000 15.40 15.40 43.61 4.11
96 97 1.966451 GAACGCAGGTCCAGGGTTG 60.966 63.158 19.55 0.00 41.43 3.77
97 98 2.391724 GAACGCAGGTCCAGGGTTGA 62.392 60.000 19.55 0.00 41.43 3.18
98 99 2.358737 CGCAGGTCCAGGGTTGAC 60.359 66.667 0.00 0.00 0.00 3.18
99 100 2.358737 GCAGGTCCAGGGTTGACG 60.359 66.667 0.00 0.00 33.46 4.35
100 101 3.148084 CAGGTCCAGGGTTGACGT 58.852 61.111 0.00 0.00 33.46 4.34
101 102 1.301716 CAGGTCCAGGGTTGACGTG 60.302 63.158 0.00 0.00 40.76 4.49
105 106 4.263572 CCAGGGTTGACGTGGCCA 62.264 66.667 0.00 0.00 46.94 5.36
106 107 2.034066 CAGGGTTGACGTGGCCAT 59.966 61.111 9.72 0.00 0.00 4.40
107 108 1.298340 CAGGGTTGACGTGGCCATA 59.702 57.895 9.72 0.00 0.00 2.74
108 109 0.744414 CAGGGTTGACGTGGCCATAG 60.744 60.000 9.72 9.48 0.00 2.23
109 110 2.112815 GGGTTGACGTGGCCATAGC 61.113 63.158 9.72 1.03 38.76 2.97
119 120 2.124736 GCCATAGCCGCACCAGAA 60.125 61.111 0.00 0.00 0.00 3.02
120 121 1.748879 GCCATAGCCGCACCAGAAA 60.749 57.895 0.00 0.00 0.00 2.52
121 122 1.718757 GCCATAGCCGCACCAGAAAG 61.719 60.000 0.00 0.00 0.00 2.62
122 123 0.107703 CCATAGCCGCACCAGAAAGA 60.108 55.000 0.00 0.00 0.00 2.52
123 124 1.293924 CATAGCCGCACCAGAAAGAG 58.706 55.000 0.00 0.00 0.00 2.85
124 125 0.179000 ATAGCCGCACCAGAAAGAGG 59.821 55.000 0.00 0.00 0.00 3.69
125 126 1.192146 TAGCCGCACCAGAAAGAGGT 61.192 55.000 0.00 0.00 40.85 3.85
126 127 2.035442 GCCGCACCAGAAAGAGGTC 61.035 63.158 0.00 0.00 37.23 3.85
127 128 1.376037 CCGCACCAGAAAGAGGTCC 60.376 63.158 0.00 0.00 37.23 4.46
128 129 1.371183 CGCACCAGAAAGAGGTCCA 59.629 57.895 0.00 0.00 37.23 4.02
129 130 0.951040 CGCACCAGAAAGAGGTCCAC 60.951 60.000 0.00 0.00 37.23 4.02
130 131 0.606673 GCACCAGAAAGAGGTCCACC 60.607 60.000 0.00 0.00 37.23 4.61
131 132 0.320771 CACCAGAAAGAGGTCCACCG 60.321 60.000 0.00 0.00 42.08 4.94
132 133 1.376037 CCAGAAAGAGGTCCACCGC 60.376 63.158 0.00 0.00 42.08 5.68
133 134 1.738099 CAGAAAGAGGTCCACCGCG 60.738 63.158 0.00 0.00 40.98 6.46
134 135 2.434359 GAAAGAGGTCCACCGCGG 60.434 66.667 26.86 26.86 40.98 6.46
135 136 3.952628 GAAAGAGGTCCACCGCGGG 62.953 68.421 31.76 18.27 40.98 6.13
149 150 4.404654 CGGGCCTCAAACGCTTGC 62.405 66.667 0.84 0.00 32.14 4.01
150 151 4.056125 GGGCCTCAAACGCTTGCC 62.056 66.667 0.84 0.00 41.42 4.52
151 152 2.985847 GGCCTCAAACGCTTGCCT 60.986 61.111 0.00 0.00 39.05 4.75
152 153 2.564721 GGCCTCAAACGCTTGCCTT 61.565 57.895 0.00 0.00 39.05 4.35
153 154 1.372128 GCCTCAAACGCTTGCCTTG 60.372 57.895 0.00 0.00 32.14 3.61
154 155 1.372128 CCTCAAACGCTTGCCTTGC 60.372 57.895 0.00 0.00 32.14 4.01
155 156 1.372128 CTCAAACGCTTGCCTTGCC 60.372 57.895 0.00 0.00 32.14 4.52
156 157 2.074230 CTCAAACGCTTGCCTTGCCA 62.074 55.000 0.00 0.00 32.14 4.92
157 158 1.950630 CAAACGCTTGCCTTGCCAC 60.951 57.895 0.00 0.00 0.00 5.01
158 159 3.150647 AAACGCTTGCCTTGCCACC 62.151 57.895 0.00 0.00 0.00 4.61
159 160 4.892965 ACGCTTGCCTTGCCACCA 62.893 61.111 0.00 0.00 0.00 4.17
160 161 4.047059 CGCTTGCCTTGCCACCAG 62.047 66.667 0.00 0.00 0.00 4.00
161 162 3.688159 GCTTGCCTTGCCACCAGG 61.688 66.667 0.00 0.00 38.23 4.45
188 189 4.424566 CGCAATGGCAGCCACCAC 62.425 66.667 19.10 7.88 44.17 4.16
189 190 2.993264 GCAATGGCAGCCACCACT 60.993 61.111 19.10 0.00 44.17 4.00
190 191 2.967397 CAATGGCAGCCACCACTG 59.033 61.111 19.10 8.29 44.17 3.66
191 192 2.283388 AATGGCAGCCACCACTGG 60.283 61.111 19.10 0.00 44.17 4.00
192 193 3.892104 AATGGCAGCCACCACTGGG 62.892 63.158 19.10 0.00 44.17 4.45
195 196 4.729918 GCAGCCACCACTGGGGAG 62.730 72.222 1.10 0.00 41.15 4.30
196 197 4.729918 CAGCCACCACTGGGGAGC 62.730 72.222 1.10 5.13 41.15 4.70
199 200 4.351054 CCACCACTGGGGAGCACC 62.351 72.222 1.10 0.00 41.15 5.01
200 201 3.569210 CACCACTGGGGAGCACCA 61.569 66.667 1.10 0.00 42.91 4.17
201 202 3.570212 ACCACTGGGGAGCACCAC 61.570 66.667 1.10 0.00 42.91 4.16
202 203 4.351054 CCACTGGGGAGCACCACC 62.351 72.222 0.00 0.09 42.91 4.61
203 204 3.252284 CACTGGGGAGCACCACCT 61.252 66.667 0.00 0.00 42.91 4.00
204 205 3.252284 ACTGGGGAGCACCACCTG 61.252 66.667 0.00 6.51 42.91 4.00
205 206 4.039092 CTGGGGAGCACCACCTGG 62.039 72.222 0.00 0.00 42.91 4.45
206 207 4.590553 TGGGGAGCACCACCTGGA 62.591 66.667 0.00 0.00 42.91 3.86
207 208 3.256960 GGGGAGCACCACCTGGAA 61.257 66.667 0.00 0.00 42.91 3.53
208 209 2.616458 GGGGAGCACCACCTGGAAT 61.616 63.158 0.00 0.00 42.91 3.01
209 210 1.077429 GGGAGCACCACCTGGAATC 60.077 63.158 0.00 0.00 39.85 2.52
210 211 1.685224 GGAGCACCACCTGGAATCA 59.315 57.895 0.00 0.00 38.94 2.57
211 212 0.038166 GGAGCACCACCTGGAATCAA 59.962 55.000 0.00 0.00 38.94 2.57
212 213 1.168714 GAGCACCACCTGGAATCAAC 58.831 55.000 0.00 0.00 38.94 3.18
213 214 0.251341 AGCACCACCTGGAATCAACC 60.251 55.000 0.00 0.00 38.94 3.77
214 215 1.586154 GCACCACCTGGAATCAACCG 61.586 60.000 0.00 0.00 38.94 4.44
215 216 0.036164 CACCACCTGGAATCAACCGA 59.964 55.000 0.00 0.00 38.94 4.69
216 217 0.036306 ACCACCTGGAATCAACCGAC 59.964 55.000 0.00 0.00 38.94 4.79
217 218 1.019278 CCACCTGGAATCAACCGACG 61.019 60.000 0.00 0.00 37.39 5.12
218 219 1.375523 ACCTGGAATCAACCGACGC 60.376 57.895 0.00 0.00 0.00 5.19
219 220 2.106683 CCTGGAATCAACCGACGCC 61.107 63.158 0.00 0.00 0.00 5.68
220 221 2.433491 TGGAATCAACCGACGCCG 60.433 61.111 0.00 0.00 0.00 6.46
221 222 2.433664 GGAATCAACCGACGCCGT 60.434 61.111 0.00 0.00 0.00 5.68
222 223 1.153784 GGAATCAACCGACGCCGTA 60.154 57.895 0.00 0.00 0.00 4.02
223 224 1.143969 GGAATCAACCGACGCCGTAG 61.144 60.000 0.00 0.00 0.00 3.51
224 225 1.749609 GAATCAACCGACGCCGTAGC 61.750 60.000 0.00 0.00 0.00 3.58
225 226 3.711541 ATCAACCGACGCCGTAGCC 62.712 63.158 0.00 0.00 34.57 3.93
231 232 4.261781 GACGCCGTAGCCCCGTAG 62.262 72.222 0.00 0.00 35.06 3.51
235 236 3.231736 CCGTAGCCCCGTAGCCAT 61.232 66.667 0.00 0.00 0.00 4.40
236 237 2.029073 CGTAGCCCCGTAGCCATG 59.971 66.667 0.00 0.00 0.00 3.66
237 238 2.426023 GTAGCCCCGTAGCCATGG 59.574 66.667 7.63 7.63 0.00 3.66
238 239 2.041301 TAGCCCCGTAGCCATGGT 60.041 61.111 14.67 2.69 0.00 3.55
239 240 2.138179 TAGCCCCGTAGCCATGGTC 61.138 63.158 14.67 5.80 0.00 4.02
240 241 4.910585 GCCCCGTAGCCATGGTCG 62.911 72.222 14.67 15.15 0.00 4.79
241 242 3.467226 CCCCGTAGCCATGGTCGT 61.467 66.667 14.67 0.81 0.00 4.34
242 243 2.129146 CCCCGTAGCCATGGTCGTA 61.129 63.158 14.67 0.00 0.00 3.43
243 244 1.362717 CCCGTAGCCATGGTCGTAG 59.637 63.158 14.67 6.36 0.00 3.51
244 245 1.299926 CCGTAGCCATGGTCGTAGC 60.300 63.158 14.67 0.00 0.00 3.58
245 246 1.734137 CGTAGCCATGGTCGTAGCT 59.266 57.895 14.67 5.33 39.37 3.32
246 247 0.317938 CGTAGCCATGGTCGTAGCTC 60.318 60.000 14.67 0.00 36.79 4.09
247 248 0.317938 GTAGCCATGGTCGTAGCTCG 60.318 60.000 14.67 0.00 36.79 5.03
248 249 1.452953 TAGCCATGGTCGTAGCTCGG 61.453 60.000 14.67 0.00 40.32 4.63
249 250 2.782222 GCCATGGTCGTAGCTCGGA 61.782 63.158 14.67 0.00 40.32 4.55
250 251 1.360551 CCATGGTCGTAGCTCGGAG 59.639 63.158 2.57 0.00 40.32 4.63
251 252 1.299468 CATGGTCGTAGCTCGGAGC 60.299 63.158 22.13 22.13 42.84 4.70
252 253 1.753078 ATGGTCGTAGCTCGGAGCA 60.753 57.895 29.88 17.70 45.56 4.26
253 254 1.729470 ATGGTCGTAGCTCGGAGCAG 61.729 60.000 29.88 20.17 45.56 4.24
254 255 2.113433 GGTCGTAGCTCGGAGCAGA 61.113 63.158 29.88 21.92 45.56 4.26
255 256 1.654954 GGTCGTAGCTCGGAGCAGAA 61.655 60.000 29.88 13.41 45.56 3.02
256 257 0.170561 GTCGTAGCTCGGAGCAGAAA 59.829 55.000 29.88 11.32 45.56 2.52
257 258 1.103803 TCGTAGCTCGGAGCAGAAAT 58.896 50.000 29.88 12.81 45.56 2.17
258 259 1.065701 TCGTAGCTCGGAGCAGAAATC 59.934 52.381 29.88 12.68 45.56 2.17
259 260 1.202302 CGTAGCTCGGAGCAGAAATCA 60.202 52.381 29.88 4.89 45.56 2.57
260 261 2.197577 GTAGCTCGGAGCAGAAATCAC 58.802 52.381 29.88 12.44 45.56 3.06
261 262 0.107945 AGCTCGGAGCAGAAATCACC 60.108 55.000 29.88 0.00 45.56 4.02
262 263 1.424493 GCTCGGAGCAGAAATCACCG 61.424 60.000 24.42 0.00 41.89 4.94
263 264 0.108615 CTCGGAGCAGAAATCACCGT 60.109 55.000 0.00 0.00 43.36 4.83
264 265 0.320374 TCGGAGCAGAAATCACCGTT 59.680 50.000 0.00 0.00 43.36 4.44
265 266 0.443869 CGGAGCAGAAATCACCGTTG 59.556 55.000 0.00 0.00 38.97 4.10
266 267 1.523758 GGAGCAGAAATCACCGTTGT 58.476 50.000 0.00 0.00 0.00 3.32
267 268 1.197721 GGAGCAGAAATCACCGTTGTG 59.802 52.381 0.00 0.00 44.18 3.33
274 275 4.524869 TCACCGTTGTGACACCAC 57.475 55.556 2.45 0.94 46.40 4.16
275 276 1.153329 TCACCGTTGTGACACCACC 60.153 57.895 2.45 0.00 46.40 4.61
276 277 2.184167 CACCGTTGTGACACCACCC 61.184 63.158 2.45 0.00 45.76 4.61
277 278 2.593436 CCGTTGTGACACCACCCC 60.593 66.667 2.45 0.00 42.53 4.95
278 279 2.190843 CGTTGTGACACCACCCCA 59.809 61.111 2.45 0.00 42.53 4.96
279 280 1.452289 CGTTGTGACACCACCCCAA 60.452 57.895 2.45 0.00 42.53 4.12
280 281 1.444119 CGTTGTGACACCACCCCAAG 61.444 60.000 2.45 0.00 42.53 3.61
281 282 1.106944 GTTGTGACACCACCCCAAGG 61.107 60.000 2.45 0.00 42.53 3.61
310 311 1.065928 GGCCGACAGTAGGACATCG 59.934 63.158 3.41 0.00 36.59 3.84
311 312 1.664321 GGCCGACAGTAGGACATCGT 61.664 60.000 3.41 0.00 36.59 3.73
312 313 0.248539 GCCGACAGTAGGACATCGTC 60.249 60.000 3.41 0.00 32.70 4.20
313 314 1.092348 CCGACAGTAGGACATCGTCA 58.908 55.000 0.00 0.00 33.68 4.35
315 316 1.529214 CGACAGTAGGACATCGTCACG 60.529 57.143 0.00 0.00 33.68 4.35
317 318 0.525668 CAGTAGGACATCGTCACGCC 60.526 60.000 0.00 0.00 33.68 5.68
318 319 0.963856 AGTAGGACATCGTCACGCCA 60.964 55.000 0.00 0.00 33.68 5.69
333 334 2.343426 GCCAAGGGAAAAGGCCTCG 61.343 63.158 5.23 0.00 42.58 4.63
353 354 2.034879 CGCCGCCTTCACATGAACT 61.035 57.895 0.00 0.00 0.00 3.01
435 436 2.432628 GTTGCCCCTGAGTCGTCG 60.433 66.667 0.00 0.00 0.00 5.12
436 437 3.691342 TTGCCCCTGAGTCGTCGG 61.691 66.667 0.00 0.00 0.00 4.79
475 476 2.132300 GGAGGTGATCTCAGCCTCC 58.868 63.158 21.56 21.56 46.60 4.30
479 480 0.689080 GGTGATCTCAGCCTCCTCCA 60.689 60.000 0.00 0.00 38.34 3.86
601 606 6.316640 TCTGTAATGTTTGGAAAGTTTGACGA 59.683 34.615 0.00 0.00 0.00 4.20
604 609 6.641176 AATGTTTGGAAAGTTTGACGAAAC 57.359 33.333 0.00 0.74 41.69 2.78
607 612 1.671845 TGGAAAGTTTGACGAAACGGG 59.328 47.619 0.00 0.00 45.34 5.28
608 613 1.941975 GGAAAGTTTGACGAAACGGGA 59.058 47.619 0.00 0.00 45.34 5.14
622 627 4.899239 GGGAGCGCCGTCTGATGG 62.899 72.222 11.67 11.67 33.83 3.51
636 641 0.178992 TGATGGAAATCCGATGGCCC 60.179 55.000 0.00 0.00 39.43 5.80
666 677 1.595382 GAGCGACCAAGCACACACT 60.595 57.895 0.00 0.00 40.15 3.55
683 694 2.620115 ACACTGAATGAAACTGCACTGG 59.380 45.455 0.00 0.00 0.00 4.00
701 720 1.040339 GGGTCCACTCGAGCTCTGAT 61.040 60.000 13.61 0.00 39.08 2.90
707 726 2.030893 CCACTCGAGCTCTGATCTCATC 60.031 54.545 13.61 0.00 0.00 2.92
718 737 4.338879 TCTGATCTCATCTGTCAGTGACA 58.661 43.478 24.09 24.09 40.50 3.58
814 833 1.603802 ACAATGAAGTTGCGTCAGTGG 59.396 47.619 14.43 1.11 43.54 4.00
972 992 2.414750 CGGAGGAGAAGAGAGGAGC 58.585 63.158 0.00 0.00 0.00 4.70
973 993 1.106944 CGGAGGAGAAGAGAGGAGCC 61.107 65.000 0.00 0.00 0.00 4.70
974 994 0.759060 GGAGGAGAAGAGAGGAGCCC 60.759 65.000 0.00 0.00 0.00 5.19
976 996 0.325203 AGGAGAAGAGAGGAGCCCAC 60.325 60.000 0.00 0.00 0.00 4.61
977 997 1.671901 GGAGAAGAGAGGAGCCCACG 61.672 65.000 0.00 0.00 0.00 4.94
994 1021 4.443266 GAGCTCTCGGTTGCGCCT 62.443 66.667 6.43 0.00 34.25 5.52
1009 1036 2.439104 GCCTCGGAGATGGGAAGCT 61.439 63.158 6.58 0.00 33.89 3.74
1084 1111 1.884926 GCGGCTTCTGATTCTCGGG 60.885 63.158 0.00 0.00 0.00 5.14
1160 1363 1.249469 ACGAGGACGGAGGGAAAGTC 61.249 60.000 0.00 0.00 44.46 3.01
1430 1637 6.173339 TCTGTTCATCACTTTGAGGTTATCC 58.827 40.000 0.00 0.00 29.15 2.59
1431 1638 5.875224 TGTTCATCACTTTGAGGTTATCCA 58.125 37.500 0.00 0.00 35.89 3.41
1432 1639 5.705441 TGTTCATCACTTTGAGGTTATCCAC 59.295 40.000 0.00 0.00 35.89 4.02
1433 1640 4.503910 TCATCACTTTGAGGTTATCCACG 58.496 43.478 0.00 0.00 35.89 4.94
1483 1694 0.803117 GAGGGTTTGGAGCGCTTTAC 59.197 55.000 13.26 6.01 0.00 2.01
1497 1708 3.003378 GCGCTTTACTGGATACCCAAATC 59.997 47.826 0.00 0.00 42.98 2.17
1554 1765 6.925211 TGTTGGAACTGTGTTTGTGATTTAA 58.075 32.000 0.00 0.00 0.00 1.52
1774 1985 2.660490 TGTGCGTTTAAGAATGCTTGC 58.340 42.857 0.00 0.00 45.87 4.01
1793 2004 4.299586 TGCCTTGGACTTATTGATCACA 57.700 40.909 0.00 0.00 0.00 3.58
1819 2030 5.065988 GGTTGGTCGCTTTCACAATGTATAT 59.934 40.000 0.00 0.00 0.00 0.86
1905 2116 8.691661 AAAGTAGTTGTATCCACTCACAAAAT 57.308 30.769 0.00 0.00 36.47 1.82
2044 2255 3.222173 TGCAGACTTTGGTTACCACAT 57.778 42.857 2.39 0.00 30.78 3.21
2101 2312 5.818857 ACACGTTACCTGTTTGTAAGTTCAT 59.181 36.000 0.00 0.00 31.66 2.57
2110 2321 9.528018 ACCTGTTTGTAAGTTCATTAATTGTTG 57.472 29.630 0.00 0.00 0.00 3.33
2137 2349 2.238144 AGTGTCGGACTACTACCAGCTA 59.762 50.000 9.88 0.00 30.86 3.32
2241 2453 5.086104 ACCGAAGTATGTTCTTGCTACAT 57.914 39.130 0.00 0.00 39.44 2.29
2261 2473 5.636837 ACATACATTTCCCATTTCGTTTCG 58.363 37.500 0.00 0.00 0.00 3.46
2314 2528 7.109501 ACTAATGTTATGGTGCAACATGTCTA 58.890 34.615 27.55 10.99 43.94 2.59
2346 2560 3.513912 ACCTTGTAGTACATACTGCTGCA 59.486 43.478 3.28 0.88 39.30 4.41
2381 2595 6.341316 TGTCATGTTTAGATGCCTACTCTTC 58.659 40.000 0.00 0.00 0.00 2.87
2407 2621 6.151663 TGTAGTAGCTGTTGTGACAAACTA 57.848 37.500 0.00 0.98 34.85 2.24
2430 2644 4.305989 TGGCTGATGTGTCAAAAACTTC 57.694 40.909 0.00 0.00 33.05 3.01
2551 2766 8.822805 AGGTACAAACTACCAATCTTCTATTCA 58.177 33.333 0.00 0.00 39.99 2.57
2636 2851 1.140252 GTGGCGTTACAGGGATATGGT 59.860 52.381 0.00 0.00 0.00 3.55
2645 2860 1.153756 GGGATATGGTTGCCCAGGG 59.846 63.158 0.00 0.00 46.15 4.45
2764 2979 4.035909 GTCCACAATTGGTAAAGTTGTCGT 59.964 41.667 10.83 0.00 44.35 4.34
2766 2981 4.973663 CCACAATTGGTAAAGTTGTCGTTC 59.026 41.667 10.83 0.00 38.23 3.95
2855 3070 7.533900 CGTGTTTTAATTCTGTATGTGTGAAGG 59.466 37.037 0.00 0.00 0.00 3.46
3267 3482 4.916983 TGCAGACACAAAGCAACTAAAT 57.083 36.364 0.00 0.00 34.97 1.40
3278 3493 7.818930 CACAAAGCAACTAAATGGGTAATCATT 59.181 33.333 0.00 0.00 38.84 2.57
3279 3494 8.034804 ACAAAGCAACTAAATGGGTAATCATTC 58.965 33.333 0.00 0.00 36.45 2.67
3293 3508 6.657541 GGGTAATCATTCTGTTTTGGACTACA 59.342 38.462 0.00 0.00 0.00 2.74
3294 3509 7.339466 GGGTAATCATTCTGTTTTGGACTACAT 59.661 37.037 0.00 0.00 0.00 2.29
3338 3553 7.973048 ATCATGTACTCCCTCTGTAAACTAA 57.027 36.000 0.00 0.00 0.00 2.24
3339 3554 7.973048 TCATGTACTCCCTCTGTAAACTAAT 57.027 36.000 0.00 0.00 0.00 1.73
3340 3555 9.656323 ATCATGTACTCCCTCTGTAAACTAATA 57.344 33.333 0.00 0.00 0.00 0.98
3446 3691 4.858850 ACCCTGCTTGTGAATGATGAATA 58.141 39.130 0.00 0.00 0.00 1.75
3482 3727 3.698040 CCAGATTCATTGTGAAGAAGGGG 59.302 47.826 0.00 0.00 40.05 4.79
3683 3929 1.108727 TTGGAGTTGCTGCTTGGTGG 61.109 55.000 0.00 0.00 0.00 4.61
3693 3939 2.558359 GCTGCTTGGTGGTGTAATCTTT 59.442 45.455 0.00 0.00 0.00 2.52
4040 4289 1.133513 TCAGGCAAAATGACACCAGGT 60.134 47.619 0.00 0.00 0.00 4.00
4068 4317 1.001048 GTTTGGGCAAGGTCCGTAAAC 60.001 52.381 0.00 0.00 31.55 2.01
4073 4322 1.235724 GCAAGGTCCGTAAACTGCTT 58.764 50.000 0.00 0.00 0.00 3.91
4075 4324 2.034179 GCAAGGTCCGTAAACTGCTTTT 59.966 45.455 0.00 0.00 0.00 2.27
4103 4352 6.294508 GCTAGCCAATGGTCTCTTTGTTTAAA 60.295 38.462 2.29 0.00 0.00 1.52
4107 4356 6.677913 CCAATGGTCTCTTTGTTTAAATCGT 58.322 36.000 0.00 0.00 0.00 3.73
4108 4357 6.582295 CCAATGGTCTCTTTGTTTAAATCGTG 59.418 38.462 0.00 0.00 0.00 4.35
4113 4362 7.658167 TGGTCTCTTTGTTTAAATCGTGTATGA 59.342 33.333 0.00 0.00 0.00 2.15
4130 4379 6.310224 CGTGTATGATGTCTTGACATGTACAA 59.690 38.462 24.26 4.49 33.53 2.41
4143 4392 7.595311 TGACATGTACAATGTACTGATCAAC 57.405 36.000 22.22 9.36 31.52 3.18
4197 4446 1.437547 AGGGAGGTAGTTTCTCTGGGT 59.562 52.381 0.00 0.00 0.00 4.51
4245 4494 5.545658 TTTTGGCTGATTTTCTAGTAGCG 57.454 39.130 0.00 0.00 35.31 4.26
4267 4516 5.567915 GCGAAGGTAAAAAGTGCTAACATTC 59.432 40.000 0.00 0.00 0.00 2.67
4299 4548 4.322080 TGATCATCTCCGAACATGGTAC 57.678 45.455 0.00 0.00 0.00 3.34
4342 4591 5.489792 AATATTATCTCACGGGCTGATGT 57.510 39.130 0.00 0.00 0.00 3.06
4353 4602 2.236146 CGGGCTGATGTATGGCCTATTA 59.764 50.000 3.32 0.00 45.35 0.98
4379 4645 4.834496 AGCCACTTGATTTTCTCCATTTCA 59.166 37.500 0.00 0.00 0.00 2.69
4402 4668 6.987992 TCACGGTGTCTAGTAAAGAAACATTT 59.012 34.615 8.17 0.00 43.45 2.32
4403 4669 7.496591 TCACGGTGTCTAGTAAAGAAACATTTT 59.503 33.333 8.17 0.00 43.45 1.82
4404 4670 8.126700 CACGGTGTCTAGTAAAGAAACATTTTT 58.873 33.333 0.00 0.00 43.45 1.94
4519 4848 2.941064 CACCTATGACATCAACAGCCTG 59.059 50.000 0.00 0.00 0.00 4.85
4636 4965 1.640670 ACAGCAAAGTATGACCCCCAT 59.359 47.619 0.00 0.00 39.25 4.00
4665 4994 3.705051 TCTGGTGGGTACGAGTAAGATT 58.295 45.455 0.00 0.00 34.61 2.40
4667 4996 3.433343 TGGTGGGTACGAGTAAGATTGA 58.567 45.455 0.00 0.00 0.00 2.57
4697 5026 5.512788 GTGCAACCGAATGATCAAATGTAAG 59.487 40.000 0.00 0.00 0.00 2.34
4698 5027 5.036737 GCAACCGAATGATCAAATGTAAGG 58.963 41.667 0.00 0.00 0.00 2.69
4699 5028 5.581605 CAACCGAATGATCAAATGTAAGGG 58.418 41.667 0.00 0.00 0.00 3.95
4700 5029 4.207165 ACCGAATGATCAAATGTAAGGGG 58.793 43.478 0.00 0.00 0.00 4.79
4701 5030 3.569701 CCGAATGATCAAATGTAAGGGGG 59.430 47.826 0.00 0.00 0.00 5.40
4702 5031 3.004734 CGAATGATCAAATGTAAGGGGGC 59.995 47.826 0.00 0.00 0.00 5.80
4703 5032 2.051334 TGATCAAATGTAAGGGGGCG 57.949 50.000 0.00 0.00 0.00 6.13
4704 5033 0.668535 GATCAAATGTAAGGGGGCGC 59.331 55.000 0.00 0.00 0.00 6.53
4705 5034 0.258774 ATCAAATGTAAGGGGGCGCT 59.741 50.000 7.64 0.00 0.00 5.92
4706 5035 0.039035 TCAAATGTAAGGGGGCGCTT 59.961 50.000 7.64 0.00 0.00 4.68
4707 5036 0.173255 CAAATGTAAGGGGGCGCTTG 59.827 55.000 7.64 0.00 0.00 4.01
4708 5037 0.970427 AAATGTAAGGGGGCGCTTGG 60.970 55.000 7.64 0.00 0.00 3.61
4709 5038 1.858739 AATGTAAGGGGGCGCTTGGA 61.859 55.000 7.64 0.00 0.00 3.53
4710 5039 1.858739 ATGTAAGGGGGCGCTTGGAA 61.859 55.000 7.64 0.00 0.00 3.53
4711 5040 1.076995 GTAAGGGGGCGCTTGGAAT 60.077 57.895 7.64 0.00 0.00 3.01
4712 5041 1.077068 TAAGGGGGCGCTTGGAATG 60.077 57.895 7.64 0.00 0.00 2.67
4713 5042 2.566111 TAAGGGGGCGCTTGGAATGG 62.566 60.000 7.64 0.00 0.00 3.16
4714 5043 4.440829 GGGGGCGCTTGGAATGGA 62.441 66.667 7.64 0.00 0.00 3.41
4715 5044 2.123726 GGGGCGCTTGGAATGGAT 60.124 61.111 7.64 0.00 0.00 3.41
4716 5045 2.492773 GGGGCGCTTGGAATGGATG 61.493 63.158 7.64 0.00 0.00 3.51
4717 5046 1.754234 GGGCGCTTGGAATGGATGT 60.754 57.895 7.64 0.00 0.00 3.06
4718 5047 0.465460 GGGCGCTTGGAATGGATGTA 60.465 55.000 7.64 0.00 0.00 2.29
4719 5048 1.388547 GGCGCTTGGAATGGATGTAA 58.611 50.000 7.64 0.00 0.00 2.41
4720 5049 1.956477 GGCGCTTGGAATGGATGTAAT 59.044 47.619 7.64 0.00 0.00 1.89
4721 5050 2.362077 GGCGCTTGGAATGGATGTAATT 59.638 45.455 7.64 0.00 0.00 1.40
4722 5051 3.550842 GGCGCTTGGAATGGATGTAATTC 60.551 47.826 7.64 0.00 34.00 2.17
4723 5052 3.849645 GCGCTTGGAATGGATGTAATTCG 60.850 47.826 0.00 0.00 35.31 3.34
4724 5053 3.559655 CGCTTGGAATGGATGTAATTCGA 59.440 43.478 0.00 0.00 35.31 3.71
4725 5054 4.214119 CGCTTGGAATGGATGTAATTCGAT 59.786 41.667 0.00 0.00 35.31 3.59
4726 5055 5.408299 CGCTTGGAATGGATGTAATTCGATA 59.592 40.000 0.00 0.00 35.31 2.92
4727 5056 6.603095 GCTTGGAATGGATGTAATTCGATAC 58.397 40.000 0.00 0.00 35.31 2.24
4728 5057 6.618592 GCTTGGAATGGATGTAATTCGATACG 60.619 42.308 0.00 0.00 35.31 3.06
4729 5058 5.234752 TGGAATGGATGTAATTCGATACGG 58.765 41.667 0.00 0.00 35.31 4.02
4730 5059 5.011227 TGGAATGGATGTAATTCGATACGGA 59.989 40.000 0.00 0.00 35.31 4.69
4731 5060 5.577164 GGAATGGATGTAATTCGATACGGAG 59.423 44.000 0.00 0.00 35.31 4.63
4732 5061 3.909430 TGGATGTAATTCGATACGGAGC 58.091 45.455 0.00 0.00 0.00 4.70
4733 5062 3.572682 TGGATGTAATTCGATACGGAGCT 59.427 43.478 0.00 0.00 0.00 4.09
4734 5063 3.921021 GGATGTAATTCGATACGGAGCTG 59.079 47.826 0.00 0.00 0.00 4.24
4735 5064 4.547532 GATGTAATTCGATACGGAGCTGT 58.452 43.478 0.00 0.00 0.00 4.40
4736 5065 4.380841 TGTAATTCGATACGGAGCTGTT 57.619 40.909 0.00 0.00 0.00 3.16
4737 5066 4.751060 TGTAATTCGATACGGAGCTGTTT 58.249 39.130 0.00 0.00 0.00 2.83
4738 5067 4.802039 TGTAATTCGATACGGAGCTGTTTC 59.198 41.667 0.00 0.00 0.00 2.78
4739 5068 3.520290 ATTCGATACGGAGCTGTTTCA 57.480 42.857 0.00 0.00 0.00 2.69
4740 5069 2.561733 TCGATACGGAGCTGTTTCAG 57.438 50.000 0.00 0.00 34.12 3.02
4741 5070 1.816835 TCGATACGGAGCTGTTTCAGT 59.183 47.619 0.00 0.00 33.43 3.41
4742 5071 2.230508 TCGATACGGAGCTGTTTCAGTT 59.769 45.455 0.00 0.00 33.43 3.16
4743 5072 3.441222 TCGATACGGAGCTGTTTCAGTTA 59.559 43.478 0.00 0.00 33.43 2.24
4744 5073 3.546670 CGATACGGAGCTGTTTCAGTTAC 59.453 47.826 0.00 0.00 33.43 2.50
4745 5074 2.902705 ACGGAGCTGTTTCAGTTACA 57.097 45.000 0.00 0.00 33.43 2.41
4746 5075 2.480845 ACGGAGCTGTTTCAGTTACAC 58.519 47.619 0.00 0.00 33.43 2.90
4747 5076 1.455786 CGGAGCTGTTTCAGTTACACG 59.544 52.381 0.00 0.00 33.43 4.49
4748 5077 1.194772 GGAGCTGTTTCAGTTACACGC 59.805 52.381 0.00 0.00 33.43 5.34
4749 5078 0.859232 AGCTGTTTCAGTTACACGCG 59.141 50.000 3.53 3.53 33.43 6.01
4750 5079 0.110823 GCTGTTTCAGTTACACGCGG 60.111 55.000 12.47 1.27 33.43 6.46
4751 5080 1.493772 CTGTTTCAGTTACACGCGGA 58.506 50.000 12.47 0.00 0.00 5.54
4752 5081 2.066262 CTGTTTCAGTTACACGCGGAT 58.934 47.619 12.47 0.00 0.00 4.18
4753 5082 2.063266 TGTTTCAGTTACACGCGGATC 58.937 47.619 12.47 0.00 0.00 3.36
4754 5083 2.063266 GTTTCAGTTACACGCGGATCA 58.937 47.619 12.47 0.00 0.00 2.92
4755 5084 2.665649 TTCAGTTACACGCGGATCAT 57.334 45.000 12.47 0.00 0.00 2.45
4756 5085 3.786516 TTCAGTTACACGCGGATCATA 57.213 42.857 12.47 0.00 0.00 2.15
4757 5086 3.074504 TCAGTTACACGCGGATCATAC 57.925 47.619 12.47 0.29 0.00 2.39
4758 5087 2.124903 CAGTTACACGCGGATCATACC 58.875 52.381 12.47 0.00 0.00 2.73
4768 5097 2.802787 GGATCATACCGGTCACTGAG 57.197 55.000 12.40 0.00 0.00 3.35
4769 5098 1.269831 GGATCATACCGGTCACTGAGC 60.270 57.143 12.40 15.63 0.00 4.26
4770 5099 1.409064 GATCATACCGGTCACTGAGCA 59.591 52.381 12.40 0.00 0.00 4.26
4771 5100 1.262417 TCATACCGGTCACTGAGCAA 58.738 50.000 12.40 0.00 0.00 3.91
4772 5101 1.831106 TCATACCGGTCACTGAGCAAT 59.169 47.619 12.40 0.00 0.00 3.56
4773 5102 2.236146 TCATACCGGTCACTGAGCAATT 59.764 45.455 12.40 0.00 0.00 2.32
4774 5103 2.851263 TACCGGTCACTGAGCAATTT 57.149 45.000 12.40 0.00 0.00 1.82
4775 5104 2.851263 ACCGGTCACTGAGCAATTTA 57.149 45.000 0.00 0.00 0.00 1.40
4776 5105 2.423577 ACCGGTCACTGAGCAATTTAC 58.576 47.619 0.00 0.00 0.00 2.01
4777 5106 1.393539 CCGGTCACTGAGCAATTTACG 59.606 52.381 8.89 0.00 0.00 3.18
4778 5107 2.066262 CGGTCACTGAGCAATTTACGT 58.934 47.619 8.89 0.00 0.00 3.57
4779 5108 2.092211 CGGTCACTGAGCAATTTACGTC 59.908 50.000 8.89 0.00 0.00 4.34
4780 5109 3.326747 GGTCACTGAGCAATTTACGTCT 58.673 45.455 3.26 0.00 0.00 4.18
4781 5110 3.123621 GGTCACTGAGCAATTTACGTCTG 59.876 47.826 3.26 0.00 0.00 3.51
4782 5111 3.987868 GTCACTGAGCAATTTACGTCTGA 59.012 43.478 0.00 0.00 0.00 3.27
4783 5112 4.447724 GTCACTGAGCAATTTACGTCTGAA 59.552 41.667 0.00 0.00 0.00 3.02
4784 5113 5.050363 GTCACTGAGCAATTTACGTCTGAAA 60.050 40.000 0.00 0.00 0.00 2.69
4785 5114 5.525745 TCACTGAGCAATTTACGTCTGAAAA 59.474 36.000 0.00 0.00 0.00 2.29
4786 5115 6.204688 TCACTGAGCAATTTACGTCTGAAAAT 59.795 34.615 0.00 0.00 0.00 1.82
4787 5116 6.303970 CACTGAGCAATTTACGTCTGAAAATG 59.696 38.462 0.00 0.00 0.00 2.32
4788 5117 6.204688 ACTGAGCAATTTACGTCTGAAAATGA 59.795 34.615 0.00 0.00 0.00 2.57
4789 5118 6.964908 TGAGCAATTTACGTCTGAAAATGAA 58.035 32.000 0.00 0.00 0.00 2.57
4790 5119 7.421599 TGAGCAATTTACGTCTGAAAATGAAA 58.578 30.769 0.00 0.00 0.00 2.69
4791 5120 7.378461 TGAGCAATTTACGTCTGAAAATGAAAC 59.622 33.333 0.00 0.00 0.00 2.78
4792 5121 6.359617 AGCAATTTACGTCTGAAAATGAAACG 59.640 34.615 0.00 0.00 39.16 3.60
4793 5122 6.358558 GCAATTTACGTCTGAAAATGAAACGA 59.641 34.615 0.00 0.00 37.13 3.85
4794 5123 7.614499 GCAATTTACGTCTGAAAATGAAACGAC 60.614 37.037 0.00 0.00 37.13 4.34
4795 5124 3.499072 ACGTCTGAAAATGAAACGACG 57.501 42.857 7.91 7.91 46.64 5.12
4796 5125 2.220133 ACGTCTGAAAATGAAACGACGG 59.780 45.455 13.14 0.00 45.84 4.79
4797 5126 2.473609 CGTCTGAAAATGAAACGACGGA 59.526 45.455 0.00 0.00 40.14 4.69
4798 5127 3.660904 CGTCTGAAAATGAAACGACGGAC 60.661 47.826 0.00 0.00 40.14 4.79
4799 5128 3.493503 GTCTGAAAATGAAACGACGGACT 59.506 43.478 0.00 0.00 32.90 3.85
4800 5129 3.493129 TCTGAAAATGAAACGACGGACTG 59.507 43.478 0.00 0.00 0.00 3.51
4801 5130 3.459145 TGAAAATGAAACGACGGACTGA 58.541 40.909 0.00 0.00 0.00 3.41
4802 5131 3.493129 TGAAAATGAAACGACGGACTGAG 59.507 43.478 0.00 0.00 0.00 3.35
4803 5132 3.380479 AAATGAAACGACGGACTGAGA 57.620 42.857 0.00 0.00 0.00 3.27
4804 5133 2.349297 ATGAAACGACGGACTGAGAC 57.651 50.000 0.00 0.00 0.00 3.36
4805 5134 1.026584 TGAAACGACGGACTGAGACA 58.973 50.000 0.00 0.00 0.00 3.41
4806 5135 1.611977 TGAAACGACGGACTGAGACAT 59.388 47.619 0.00 0.00 0.00 3.06
4807 5136 1.986378 GAAACGACGGACTGAGACATG 59.014 52.381 0.00 0.00 0.00 3.21
4808 5137 0.959553 AACGACGGACTGAGACATGT 59.040 50.000 0.00 0.00 0.00 3.21
4809 5138 1.817357 ACGACGGACTGAGACATGTA 58.183 50.000 0.00 0.00 0.00 2.29
4810 5139 2.366533 ACGACGGACTGAGACATGTAT 58.633 47.619 0.00 0.00 0.00 2.29
4811 5140 2.753452 ACGACGGACTGAGACATGTATT 59.247 45.455 0.00 0.00 0.00 1.89
4812 5141 3.943381 ACGACGGACTGAGACATGTATTA 59.057 43.478 0.00 0.00 0.00 0.98
4813 5142 4.579340 ACGACGGACTGAGACATGTATTAT 59.421 41.667 0.00 0.00 0.00 1.28
4814 5143 5.067413 ACGACGGACTGAGACATGTATTATT 59.933 40.000 0.00 0.00 0.00 1.40
4815 5144 5.977725 CGACGGACTGAGACATGTATTATTT 59.022 40.000 0.00 0.00 0.00 1.40
4816 5145 7.136772 CGACGGACTGAGACATGTATTATTTA 58.863 38.462 0.00 0.00 0.00 1.40
4817 5146 7.113124 CGACGGACTGAGACATGTATTATTTAC 59.887 40.741 0.00 0.00 0.00 2.01
4818 5147 7.778083 ACGGACTGAGACATGTATTATTTACA 58.222 34.615 0.00 0.00 0.00 2.41
4819 5148 8.255206 ACGGACTGAGACATGTATTATTTACAA 58.745 33.333 0.00 0.00 0.00 2.41
4820 5149 8.755941 CGGACTGAGACATGTATTATTTACAAG 58.244 37.037 0.00 0.00 0.00 3.16
4821 5150 9.601217 GGACTGAGACATGTATTATTTACAAGT 57.399 33.333 0.00 0.00 32.87 3.16
4823 5152 9.944376 ACTGAGACATGTATTATTTACAAGTGT 57.056 29.630 0.00 0.00 30.73 3.55
4840 5169 7.667984 ACAAGTGTATTTAAAACGAAAACGG 57.332 32.000 0.00 0.00 0.00 4.44
4841 5170 6.196910 ACAAGTGTATTTAAAACGAAAACGGC 59.803 34.615 0.00 0.00 0.00 5.68
4842 5171 6.063640 AGTGTATTTAAAACGAAAACGGCT 57.936 33.333 0.00 0.00 0.00 5.52
4843 5172 7.188468 AGTGTATTTAAAACGAAAACGGCTA 57.812 32.000 0.00 0.00 0.00 3.93
4844 5173 7.809665 AGTGTATTTAAAACGAAAACGGCTAT 58.190 30.769 0.00 0.00 0.00 2.97
4845 5174 7.959109 AGTGTATTTAAAACGAAAACGGCTATC 59.041 33.333 0.00 0.00 0.00 2.08
4846 5175 7.216881 GTGTATTTAAAACGAAAACGGCTATCC 59.783 37.037 0.00 0.00 0.00 2.59
4847 5176 5.686159 TTTAAAACGAAAACGGCTATCCA 57.314 34.783 0.00 0.00 0.00 3.41
4848 5177 5.686159 TTAAAACGAAAACGGCTATCCAA 57.314 34.783 0.00 0.00 0.00 3.53
4849 5178 4.571372 AAAACGAAAACGGCTATCCAAA 57.429 36.364 0.00 0.00 0.00 3.28
4850 5179 3.547649 AACGAAAACGGCTATCCAAAC 57.452 42.857 0.00 0.00 0.00 2.93
4851 5180 2.496111 ACGAAAACGGCTATCCAAACA 58.504 42.857 0.00 0.00 0.00 2.83
4852 5181 2.482721 ACGAAAACGGCTATCCAAACAG 59.517 45.455 0.00 0.00 0.00 3.16
4853 5182 2.159572 CGAAAACGGCTATCCAAACAGG 60.160 50.000 0.00 0.00 39.47 4.00
4854 5183 1.834188 AAACGGCTATCCAAACAGGG 58.166 50.000 0.00 0.00 38.24 4.45
4855 5184 0.679960 AACGGCTATCCAAACAGGGC 60.680 55.000 0.00 0.00 38.24 5.19
4856 5185 1.823899 CGGCTATCCAAACAGGGCC 60.824 63.158 0.00 0.00 38.47 5.80
4857 5186 1.615262 GGCTATCCAAACAGGGCCT 59.385 57.895 0.00 0.00 38.71 5.19
4858 5187 0.843984 GGCTATCCAAACAGGGCCTA 59.156 55.000 5.28 0.00 38.71 3.93
4859 5188 1.214424 GGCTATCCAAACAGGGCCTAA 59.786 52.381 5.28 0.00 38.71 2.69
4875 5204 2.872858 GCCTAATCTGTAAAGCGGAAGG 59.127 50.000 0.00 0.00 35.86 3.46
5048 5381 5.545335 AGATGAGATGGGTGCAGATTATGTA 59.455 40.000 0.00 0.00 0.00 2.29
5249 5594 1.889105 CGCTGCCGGCAATACAGAT 60.889 57.895 32.09 0.00 41.91 2.90
5379 5724 1.204941 GACCGCCAGTGACAGTATCTT 59.795 52.381 0.00 0.00 0.00 2.40
5437 5782 2.439701 CAGGCTGGTGCATCAGGG 60.440 66.667 27.74 5.40 41.91 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.045926 ACCATGTCCAAGGCTCGC 60.046 61.111 0.00 0.00 0.00 5.03
1 2 1.003355 ACACCATGTCCAAGGCTCG 60.003 57.895 0.00 0.00 0.00 5.03
2 3 0.036732 TCACACCATGTCCAAGGCTC 59.963 55.000 0.00 0.00 0.00 4.70
3 4 0.478072 TTCACACCATGTCCAAGGCT 59.522 50.000 0.00 0.00 0.00 4.58
4 5 0.883833 CTTCACACCATGTCCAAGGC 59.116 55.000 0.00 0.00 0.00 4.35
5 6 0.883833 GCTTCACACCATGTCCAAGG 59.116 55.000 0.00 0.00 0.00 3.61
6 7 0.518636 CGCTTCACACCATGTCCAAG 59.481 55.000 0.00 0.00 0.00 3.61
7 8 0.179032 ACGCTTCACACCATGTCCAA 60.179 50.000 0.00 0.00 0.00 3.53
8 9 0.179032 AACGCTTCACACCATGTCCA 60.179 50.000 0.00 0.00 0.00 4.02
9 10 0.238289 CAACGCTTCACACCATGTCC 59.762 55.000 0.00 0.00 0.00 4.02
10 11 0.944386 ACAACGCTTCACACCATGTC 59.056 50.000 0.00 0.00 0.00 3.06
11 12 0.662619 CACAACGCTTCACACCATGT 59.337 50.000 0.00 0.00 0.00 3.21
12 13 0.040157 CCACAACGCTTCACACCATG 60.040 55.000 0.00 0.00 0.00 3.66
13 14 1.795170 GCCACAACGCTTCACACCAT 61.795 55.000 0.00 0.00 0.00 3.55
14 15 2.477176 GCCACAACGCTTCACACCA 61.477 57.895 0.00 0.00 0.00 4.17
15 16 2.331451 GCCACAACGCTTCACACC 59.669 61.111 0.00 0.00 0.00 4.16
16 17 2.331451 GGCCACAACGCTTCACAC 59.669 61.111 0.00 0.00 0.00 3.82
17 18 3.276091 CGGCCACAACGCTTCACA 61.276 61.111 2.24 0.00 0.00 3.58
18 19 2.443957 CTTCGGCCACAACGCTTCAC 62.444 60.000 2.24 0.00 0.00 3.18
19 20 2.203084 TTCGGCCACAACGCTTCA 60.203 55.556 2.24 0.00 0.00 3.02
20 21 2.556287 CTTCGGCCACAACGCTTC 59.444 61.111 2.24 0.00 0.00 3.86
21 22 3.660111 GCTTCGGCCACAACGCTT 61.660 61.111 2.24 0.00 34.32 4.68
31 32 1.741770 CTACCAGTGTGGCTTCGGC 60.742 63.158 0.00 0.00 42.67 5.54
32 33 0.108615 CTCTACCAGTGTGGCTTCGG 60.109 60.000 0.00 0.00 42.67 4.30
33 34 0.108615 CCTCTACCAGTGTGGCTTCG 60.109 60.000 0.00 0.00 42.67 3.79
34 35 1.066787 GTCCTCTACCAGTGTGGCTTC 60.067 57.143 0.00 0.00 42.67 3.86
35 36 0.977395 GTCCTCTACCAGTGTGGCTT 59.023 55.000 0.00 0.00 42.67 4.35
36 37 1.251527 CGTCCTCTACCAGTGTGGCT 61.252 60.000 0.00 0.00 42.67 4.75
37 38 1.215647 CGTCCTCTACCAGTGTGGC 59.784 63.158 0.00 0.00 42.67 5.01
38 39 0.526662 GACGTCCTCTACCAGTGTGG 59.473 60.000 3.51 0.00 45.02 4.17
39 40 0.168348 CGACGTCCTCTACCAGTGTG 59.832 60.000 10.58 0.00 0.00 3.82
40 41 0.959372 CCGACGTCCTCTACCAGTGT 60.959 60.000 10.58 0.00 0.00 3.55
41 42 1.801332 CCGACGTCCTCTACCAGTG 59.199 63.158 10.58 0.00 0.00 3.66
42 43 2.045131 GCCGACGTCCTCTACCAGT 61.045 63.158 10.58 0.00 0.00 4.00
43 44 2.799371 GCCGACGTCCTCTACCAG 59.201 66.667 10.58 0.00 0.00 4.00
44 45 3.129502 CGCCGACGTCCTCTACCA 61.130 66.667 10.58 0.00 33.53 3.25
45 46 2.401766 TTCGCCGACGTCCTCTACC 61.402 63.158 10.58 0.00 41.18 3.18
46 47 1.226239 GTTCGCCGACGTCCTCTAC 60.226 63.158 10.58 0.00 41.18 2.59
47 48 2.401766 GGTTCGCCGACGTCCTCTA 61.402 63.158 10.58 0.00 41.18 2.43
48 49 3.745803 GGTTCGCCGACGTCCTCT 61.746 66.667 10.58 0.00 41.18 3.69
58 59 3.934391 CTGGTGTCCTCGGTTCGCC 62.934 68.421 6.56 6.56 0.00 5.54
59 60 2.432628 CTGGTGTCCTCGGTTCGC 60.433 66.667 0.00 0.00 0.00 4.70
60 61 1.213013 CTCTGGTGTCCTCGGTTCG 59.787 63.158 0.00 0.00 0.00 3.95
61 62 0.966920 TTCTCTGGTGTCCTCGGTTC 59.033 55.000 0.00 0.00 0.00 3.62
62 63 0.680061 GTTCTCTGGTGTCCTCGGTT 59.320 55.000 0.00 0.00 0.00 4.44
63 64 1.524863 CGTTCTCTGGTGTCCTCGGT 61.525 60.000 0.00 0.00 0.00 4.69
64 65 1.213013 CGTTCTCTGGTGTCCTCGG 59.787 63.158 0.00 0.00 0.00 4.63
65 66 1.444553 GCGTTCTCTGGTGTCCTCG 60.445 63.158 0.00 0.00 0.00 4.63
66 67 0.389166 CTGCGTTCTCTGGTGTCCTC 60.389 60.000 0.00 0.00 0.00 3.71
67 68 1.668294 CTGCGTTCTCTGGTGTCCT 59.332 57.895 0.00 0.00 0.00 3.85
68 69 1.374758 CCTGCGTTCTCTGGTGTCC 60.375 63.158 0.00 0.00 0.00 4.02
69 70 0.667792 GACCTGCGTTCTCTGGTGTC 60.668 60.000 0.00 0.00 38.23 3.67
70 71 1.367840 GACCTGCGTTCTCTGGTGT 59.632 57.895 0.00 0.00 38.23 4.16
71 72 1.374758 GGACCTGCGTTCTCTGGTG 60.375 63.158 0.00 0.00 38.23 4.17
72 73 1.821061 CTGGACCTGCGTTCTCTGGT 61.821 60.000 0.00 0.00 40.38 4.00
73 74 1.079543 CTGGACCTGCGTTCTCTGG 60.080 63.158 0.00 0.00 0.00 3.86
74 75 1.079543 CCTGGACCTGCGTTCTCTG 60.080 63.158 0.00 0.00 0.00 3.35
75 76 2.286523 CCCTGGACCTGCGTTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
76 77 2.113243 AACCCTGGACCTGCGTTCTC 62.113 60.000 0.00 0.00 0.00 2.87
77 78 2.147387 AACCCTGGACCTGCGTTCT 61.147 57.895 0.00 0.00 0.00 3.01
78 79 1.966451 CAACCCTGGACCTGCGTTC 60.966 63.158 0.00 0.00 0.00 3.95
79 80 2.113139 CAACCCTGGACCTGCGTT 59.887 61.111 0.00 0.00 0.00 4.84
80 81 2.847234 TCAACCCTGGACCTGCGT 60.847 61.111 0.00 0.00 0.00 5.24
81 82 2.358737 GTCAACCCTGGACCTGCG 60.359 66.667 0.00 0.00 0.00 5.18
82 83 2.358737 CGTCAACCCTGGACCTGC 60.359 66.667 0.00 0.00 31.55 4.85
83 84 1.301716 CACGTCAACCCTGGACCTG 60.302 63.158 0.00 0.00 31.55 4.00
84 85 2.516888 CCACGTCAACCCTGGACCT 61.517 63.158 0.00 0.00 31.55 3.85
85 86 2.032071 CCACGTCAACCCTGGACC 59.968 66.667 0.00 0.00 31.55 4.46
86 87 2.668550 GCCACGTCAACCCTGGAC 60.669 66.667 0.00 0.00 0.00 4.02
87 88 3.948719 GGCCACGTCAACCCTGGA 61.949 66.667 0.00 0.00 0.00 3.86
88 89 2.191786 TATGGCCACGTCAACCCTGG 62.192 60.000 8.16 0.00 0.00 4.45
89 90 0.744414 CTATGGCCACGTCAACCCTG 60.744 60.000 8.16 0.00 0.00 4.45
90 91 1.602237 CTATGGCCACGTCAACCCT 59.398 57.895 8.16 0.00 0.00 4.34
91 92 2.112815 GCTATGGCCACGTCAACCC 61.113 63.158 8.16 0.00 0.00 4.11
92 93 3.497879 GCTATGGCCACGTCAACC 58.502 61.111 8.16 0.00 0.00 3.77
102 103 1.718757 CTTTCTGGTGCGGCTATGGC 61.719 60.000 0.00 0.00 37.82 4.40
103 104 0.107703 TCTTTCTGGTGCGGCTATGG 60.108 55.000 0.00 0.00 0.00 2.74
104 105 1.293924 CTCTTTCTGGTGCGGCTATG 58.706 55.000 0.00 0.00 0.00 2.23
105 106 0.179000 CCTCTTTCTGGTGCGGCTAT 59.821 55.000 0.00 0.00 0.00 2.97
106 107 1.192146 ACCTCTTTCTGGTGCGGCTA 61.192 55.000 0.00 0.00 36.30 3.93
107 108 2.348998 CCTCTTTCTGGTGCGGCT 59.651 61.111 0.00 0.00 0.00 5.52
108 109 2.032681 ACCTCTTTCTGGTGCGGC 59.967 61.111 0.00 0.00 36.30 6.53
109 110 1.376037 GGACCTCTTTCTGGTGCGG 60.376 63.158 0.00 0.00 38.03 5.69
110 111 0.951040 GTGGACCTCTTTCTGGTGCG 60.951 60.000 0.00 0.00 46.85 5.34
111 112 0.606673 GGTGGACCTCTTTCTGGTGC 60.607 60.000 0.00 0.00 44.62 5.01
112 113 0.320771 CGGTGGACCTCTTTCTGGTG 60.321 60.000 0.00 0.00 38.03 4.17
113 114 2.058675 CGGTGGACCTCTTTCTGGT 58.941 57.895 0.00 0.00 41.07 4.00
114 115 1.376037 GCGGTGGACCTCTTTCTGG 60.376 63.158 0.00 0.00 0.00 3.86
115 116 1.738099 CGCGGTGGACCTCTTTCTG 60.738 63.158 0.00 0.00 0.00 3.02
116 117 2.657237 CGCGGTGGACCTCTTTCT 59.343 61.111 0.00 0.00 0.00 2.52
117 118 2.434359 CCGCGGTGGACCTCTTTC 60.434 66.667 19.50 0.00 42.00 2.62
118 119 4.016706 CCCGCGGTGGACCTCTTT 62.017 66.667 26.12 0.00 42.00 2.52
132 133 4.404654 GCAAGCGTTTGAGGCCCG 62.405 66.667 16.78 0.00 36.36 6.13
133 134 4.056125 GGCAAGCGTTTGAGGCCC 62.056 66.667 16.78 3.40 38.70 5.80
134 135 2.564721 AAGGCAAGCGTTTGAGGCC 61.565 57.895 16.78 9.90 44.92 5.19
135 136 1.372128 CAAGGCAAGCGTTTGAGGC 60.372 57.895 16.78 1.78 36.36 4.70
136 137 1.372128 GCAAGGCAAGCGTTTGAGG 60.372 57.895 16.78 2.56 36.36 3.86
137 138 1.372128 GGCAAGGCAAGCGTTTGAG 60.372 57.895 16.78 3.29 36.36 3.02
138 139 2.124060 TGGCAAGGCAAGCGTTTGA 61.124 52.632 16.78 0.00 36.36 2.69
139 140 1.950630 GTGGCAAGGCAAGCGTTTG 60.951 57.895 7.74 7.74 37.36 2.93
140 141 2.417097 GTGGCAAGGCAAGCGTTT 59.583 55.556 0.00 0.00 0.00 3.60
141 142 3.605664 GGTGGCAAGGCAAGCGTT 61.606 61.111 0.00 0.00 0.00 4.84
142 143 4.892965 TGGTGGCAAGGCAAGCGT 62.893 61.111 0.00 0.00 31.89 5.07
143 144 4.047059 CTGGTGGCAAGGCAAGCG 62.047 66.667 0.00 0.00 31.89 4.68
144 145 3.688159 CCTGGTGGCAAGGCAAGC 61.688 66.667 0.00 0.00 0.00 4.01
171 172 4.424566 GTGGTGGCTGCCATTGCG 62.425 66.667 26.22 0.00 41.08 4.85
172 173 2.993264 AGTGGTGGCTGCCATTGC 60.993 61.111 26.22 16.70 41.08 3.56
173 174 2.642254 CCAGTGGTGGCTGCCATTG 61.642 63.158 26.22 18.98 43.31 2.82
174 175 2.283388 CCAGTGGTGGCTGCCATT 60.283 61.111 26.22 8.34 41.08 3.16
175 176 4.371417 CCCAGTGGTGGCTGCCAT 62.371 66.667 26.22 5.53 43.44 4.40
178 179 4.729918 CTCCCCAGTGGTGGCTGC 62.730 72.222 8.74 0.00 43.44 5.25
179 180 4.729918 GCTCCCCAGTGGTGGCTG 62.730 72.222 8.74 6.75 43.44 4.85
182 183 4.351054 GGTGCTCCCCAGTGGTGG 62.351 72.222 8.74 9.34 44.56 4.61
183 184 3.569210 TGGTGCTCCCCAGTGGTG 61.569 66.667 8.74 0.00 34.77 4.17
184 185 3.570212 GTGGTGCTCCCCAGTGGT 61.570 66.667 8.74 0.00 34.43 4.16
185 186 4.351054 GGTGGTGCTCCCCAGTGG 62.351 72.222 0.63 0.63 34.43 4.00
186 187 3.252284 AGGTGGTGCTCCCCAGTG 61.252 66.667 12.89 0.00 34.43 3.66
187 188 3.252284 CAGGTGGTGCTCCCCAGT 61.252 66.667 12.89 0.00 34.43 4.00
188 189 4.039092 CCAGGTGGTGCTCCCCAG 62.039 72.222 12.89 6.47 34.43 4.45
189 190 4.590553 TCCAGGTGGTGCTCCCCA 62.591 66.667 12.89 1.39 36.34 4.96
190 191 2.558380 GATTCCAGGTGGTGCTCCCC 62.558 65.000 1.59 3.38 36.34 4.81
191 192 1.077429 GATTCCAGGTGGTGCTCCC 60.077 63.158 1.59 0.00 36.34 4.30
192 193 0.038166 TTGATTCCAGGTGGTGCTCC 59.962 55.000 0.00 0.00 36.34 4.70
193 194 1.168714 GTTGATTCCAGGTGGTGCTC 58.831 55.000 0.00 0.00 36.34 4.26
194 195 0.251341 GGTTGATTCCAGGTGGTGCT 60.251 55.000 0.00 0.00 36.34 4.40
195 196 1.586154 CGGTTGATTCCAGGTGGTGC 61.586 60.000 0.00 0.00 36.34 5.01
196 197 0.036164 TCGGTTGATTCCAGGTGGTG 59.964 55.000 0.00 0.00 36.34 4.17
197 198 0.036306 GTCGGTTGATTCCAGGTGGT 59.964 55.000 0.00 0.00 36.34 4.16
198 199 1.019278 CGTCGGTTGATTCCAGGTGG 61.019 60.000 0.00 0.00 0.00 4.61
199 200 1.635663 GCGTCGGTTGATTCCAGGTG 61.636 60.000 0.00 0.00 0.00 4.00
200 201 1.375523 GCGTCGGTTGATTCCAGGT 60.376 57.895 0.00 0.00 0.00 4.00
201 202 2.106683 GGCGTCGGTTGATTCCAGG 61.107 63.158 0.00 0.00 0.00 4.45
202 203 2.452813 CGGCGTCGGTTGATTCCAG 61.453 63.158 0.00 0.00 0.00 3.86
203 204 1.875420 TACGGCGTCGGTTGATTCCA 61.875 55.000 19.21 0.00 41.39 3.53
204 205 1.143969 CTACGGCGTCGGTTGATTCC 61.144 60.000 19.21 0.00 41.39 3.01
205 206 1.749609 GCTACGGCGTCGGTTGATTC 61.750 60.000 19.21 0.00 41.39 2.52
206 207 1.808390 GCTACGGCGTCGGTTGATT 60.808 57.895 19.21 0.00 41.39 2.57
207 208 2.202703 GCTACGGCGTCGGTTGAT 60.203 61.111 19.21 0.00 41.39 2.57
208 209 4.424566 GGCTACGGCGTCGGTTGA 62.425 66.667 19.21 0.00 41.39 3.18
214 215 4.261781 CTACGGGGCTACGGCGTC 62.262 72.222 19.21 2.08 39.81 5.19
218 219 3.231736 ATGGCTACGGGGCTACGG 61.232 66.667 7.03 0.00 41.48 4.02
219 220 2.029073 CATGGCTACGGGGCTACG 59.971 66.667 5.89 0.88 41.48 3.51
220 221 2.379030 GACCATGGCTACGGGGCTAC 62.379 65.000 13.04 0.00 41.48 3.58
221 222 2.041301 ACCATGGCTACGGGGCTA 60.041 61.111 13.04 0.00 41.48 3.93
222 223 3.480133 GACCATGGCTACGGGGCT 61.480 66.667 13.04 0.00 41.48 5.19
223 224 4.910585 CGACCATGGCTACGGGGC 62.911 72.222 13.04 0.00 41.27 5.80
224 225 2.083835 CTACGACCATGGCTACGGGG 62.084 65.000 23.38 14.69 0.00 5.73
225 226 1.362717 CTACGACCATGGCTACGGG 59.637 63.158 23.38 14.94 0.00 5.28
226 227 1.299926 GCTACGACCATGGCTACGG 60.300 63.158 23.38 12.33 0.00 4.02
227 228 0.317938 GAGCTACGACCATGGCTACG 60.318 60.000 13.04 17.40 36.40 3.51
228 229 0.317938 CGAGCTACGACCATGGCTAC 60.318 60.000 13.04 2.68 45.77 3.58
229 230 1.452953 CCGAGCTACGACCATGGCTA 61.453 60.000 13.04 0.00 45.77 3.93
230 231 2.786495 CCGAGCTACGACCATGGCT 61.786 63.158 13.04 0.75 45.77 4.75
231 232 2.279517 CCGAGCTACGACCATGGC 60.280 66.667 13.04 3.65 45.77 4.40
232 233 1.360551 CTCCGAGCTACGACCATGG 59.639 63.158 11.19 11.19 45.77 3.66
233 234 1.299468 GCTCCGAGCTACGACCATG 60.299 63.158 13.42 0.00 45.77 3.66
234 235 1.729470 CTGCTCCGAGCTACGACCAT 61.729 60.000 20.87 0.00 42.97 3.55
235 236 2.360726 TGCTCCGAGCTACGACCA 60.361 61.111 20.87 0.00 42.97 4.02
236 237 1.654954 TTCTGCTCCGAGCTACGACC 61.655 60.000 20.87 0.00 42.97 4.79
237 238 0.170561 TTTCTGCTCCGAGCTACGAC 59.829 55.000 20.87 0.00 42.97 4.34
238 239 1.065701 GATTTCTGCTCCGAGCTACGA 59.934 52.381 20.87 11.72 42.97 3.43
239 240 1.202302 TGATTTCTGCTCCGAGCTACG 60.202 52.381 20.87 9.71 42.97 3.51
240 241 2.197577 GTGATTTCTGCTCCGAGCTAC 58.802 52.381 20.87 6.93 42.97 3.58
241 242 1.137086 GGTGATTTCTGCTCCGAGCTA 59.863 52.381 20.87 6.90 42.97 3.32
242 243 0.107945 GGTGATTTCTGCTCCGAGCT 60.108 55.000 20.87 0.03 42.97 4.09
243 244 1.424493 CGGTGATTTCTGCTCCGAGC 61.424 60.000 13.81 13.81 43.22 5.03
244 245 0.108615 ACGGTGATTTCTGCTCCGAG 60.109 55.000 10.53 0.00 43.22 4.63
245 246 0.320374 AACGGTGATTTCTGCTCCGA 59.680 50.000 10.53 0.00 43.22 4.55
246 247 0.443869 CAACGGTGATTTCTGCTCCG 59.556 55.000 0.00 0.00 45.53 4.63
247 248 1.523758 ACAACGGTGATTTCTGCTCC 58.476 50.000 7.88 0.00 0.00 4.70
258 259 2.184167 GGGTGGTGTCACAACGGTG 61.184 63.158 0.00 0.00 45.32 4.94
259 260 2.191109 GGGTGGTGTCACAACGGT 59.809 61.111 5.12 0.00 45.32 4.83
260 261 2.593436 GGGGTGGTGTCACAACGG 60.593 66.667 5.12 0.00 45.32 4.44
261 262 1.444119 CTTGGGGTGGTGTCACAACG 61.444 60.000 5.12 0.00 45.32 4.10
262 263 1.106944 CCTTGGGGTGGTGTCACAAC 61.107 60.000 5.12 3.24 45.32 3.32
263 264 1.228793 CCTTGGGGTGGTGTCACAA 59.771 57.895 5.12 0.00 45.32 3.33
264 265 2.762554 CCCTTGGGGTGGTGTCACA 61.763 63.158 5.12 0.00 45.32 3.58
265 266 2.115266 CCCTTGGGGTGGTGTCAC 59.885 66.667 0.00 0.00 42.91 3.67
299 300 0.963856 TGGCGTGACGATGTCCTACT 60.964 55.000 10.10 0.00 0.00 2.57
300 301 0.108992 TTGGCGTGACGATGTCCTAC 60.109 55.000 10.10 0.00 0.00 3.18
301 302 0.172578 CTTGGCGTGACGATGTCCTA 59.827 55.000 10.10 0.00 0.00 2.94
310 311 1.956802 CCTTTTCCCTTGGCGTGAC 59.043 57.895 0.00 0.00 0.00 3.67
311 312 1.901464 GCCTTTTCCCTTGGCGTGA 60.901 57.895 0.00 0.00 37.11 4.35
312 313 2.650778 GCCTTTTCCCTTGGCGTG 59.349 61.111 0.00 0.00 37.11 5.34
313 314 2.600470 GGCCTTTTCCCTTGGCGT 60.600 61.111 0.00 0.00 46.97 5.68
315 316 2.343426 CGAGGCCTTTTCCCTTGGC 61.343 63.158 6.77 0.00 45.42 4.52
317 318 2.343426 GGCGAGGCCTTTTCCCTTG 61.343 63.158 6.77 0.00 46.69 3.61
318 319 2.035783 GGCGAGGCCTTTTCCCTT 59.964 61.111 6.77 0.00 46.69 3.95
395 396 4.785453 CTGCCGCACCTTCTCCCC 62.785 72.222 0.00 0.00 0.00 4.81
426 427 3.125573 CGCCTCTCCGACGACTCA 61.126 66.667 0.00 0.00 0.00 3.41
436 437 4.244802 CTCCTCGCGTCGCCTCTC 62.245 72.222 12.44 0.00 0.00 3.20
475 476 8.142994 AGTATACGCATAACTCAAAAATGGAG 57.857 34.615 0.00 0.00 38.36 3.86
568 571 9.143155 ACTTTCCAAACATTACAGAATTTACCT 57.857 29.630 0.00 0.00 0.00 3.08
607 612 0.811616 ATTTCCATCAGACGGCGCTC 60.812 55.000 6.90 3.86 0.00 5.03
608 613 0.811616 GATTTCCATCAGACGGCGCT 60.812 55.000 6.90 1.65 0.00 5.92
621 626 1.529244 CAGGGGCCATCGGATTTCC 60.529 63.158 4.39 0.00 0.00 3.13
622 627 2.196245 GCAGGGGCCATCGGATTTC 61.196 63.158 4.39 0.00 0.00 2.17
651 656 1.069703 CATTCAGTGTGTGCTTGGTCG 60.070 52.381 0.00 0.00 0.00 4.79
657 662 2.033801 GCAGTTTCATTCAGTGTGTGCT 59.966 45.455 0.00 0.00 0.00 4.40
666 677 2.229792 GACCCAGTGCAGTTTCATTCA 58.770 47.619 0.00 0.00 0.00 2.57
683 694 0.383949 GATCAGAGCTCGAGTGGACC 59.616 60.000 15.13 0.00 0.00 4.46
701 720 5.124617 GTCTATGTGTCACTGACAGATGAGA 59.875 44.000 25.08 20.00 44.36 3.27
707 726 4.243007 TGTGTCTATGTGTCACTGACAG 57.757 45.455 12.33 0.00 43.57 3.51
718 737 0.039798 ACGCGACGTTGTGTCTATGT 60.040 50.000 15.93 0.00 45.87 2.29
963 983 2.757917 GCTCGTGGGCTCCTCTCT 60.758 66.667 0.00 0.00 0.00 3.10
977 997 4.443266 AGGCGCAACCGAGAGCTC 62.443 66.667 10.83 5.27 46.52 4.09
994 1021 1.221840 GCAAGCTTCCCATCTCCGA 59.778 57.895 0.00 0.00 0.00 4.55
998 1025 1.222936 CCTCGCAAGCTTCCCATCT 59.777 57.895 0.00 0.00 37.18 2.90
1005 1032 2.740055 CGCTCACCTCGCAAGCTT 60.740 61.111 0.00 0.00 33.83 3.74
1084 1111 1.209127 CGCACGAAATCAACACCCC 59.791 57.895 0.00 0.00 0.00 4.95
1089 1116 0.725784 CACCAGCGCACGAAATCAAC 60.726 55.000 11.47 0.00 0.00 3.18
1137 1340 3.823330 CCCTCCGTCCTCGTTCCG 61.823 72.222 0.00 0.00 35.01 4.30
1281 1484 1.737793 CCTGCAGCTAACTTAAACCCG 59.262 52.381 8.66 0.00 0.00 5.28
1290 1493 2.100749 ACAACCAAAACCTGCAGCTAAC 59.899 45.455 8.66 0.00 0.00 2.34
1339 1546 6.212791 ACCTAACAATTGCTCTACTTGACCTA 59.787 38.462 5.05 0.00 0.00 3.08
1340 1547 5.013183 ACCTAACAATTGCTCTACTTGACCT 59.987 40.000 5.05 0.00 0.00 3.85
1346 1553 5.934625 CAGTTCACCTAACAATTGCTCTACT 59.065 40.000 5.05 0.00 40.83 2.57
1430 1637 0.673644 ACGCTGGATTCTTTCCCGTG 60.674 55.000 0.00 0.00 44.77 4.94
1431 1638 0.673644 CACGCTGGATTCTTTCCCGT 60.674 55.000 0.00 0.00 44.77 5.28
1432 1639 1.982073 GCACGCTGGATTCTTTCCCG 61.982 60.000 0.00 0.00 44.77 5.14
1433 1640 0.678048 AGCACGCTGGATTCTTTCCC 60.678 55.000 0.00 0.00 44.77 3.97
1497 1708 7.665145 ACCCAAAATTCAAAATACATTTCCAGG 59.335 33.333 0.00 0.00 0.00 4.45
1520 1731 6.584185 ACACAGTTCCAACAATATTAACCC 57.416 37.500 0.00 0.00 0.00 4.11
1582 1793 4.620982 ACAGGTGCAAAAGCAAATAAGTC 58.379 39.130 0.00 0.00 0.00 3.01
1746 1957 5.659426 CATTCTTAAACGCACAAGCAAAAG 58.341 37.500 0.00 0.00 42.27 2.27
1774 1985 4.202441 CCCTGTGATCAATAAGTCCAAGG 58.798 47.826 0.00 0.00 0.00 3.61
1793 2004 0.106918 TTGTGAAAGCGACCAACCCT 60.107 50.000 0.00 0.00 0.00 4.34
1905 2116 5.852282 AGTGCCTTCTTTTGCTCTTTAAA 57.148 34.783 0.00 0.00 0.00 1.52
2016 2227 7.469456 GTGGTAACCAAAGTCTGCAAGAAAATA 60.469 37.037 0.00 0.00 39.51 1.40
2101 2312 4.096532 TCCGACACTGCAAACAACAATTAA 59.903 37.500 0.00 0.00 0.00 1.40
2110 2321 2.150397 AGTAGTCCGACACTGCAAAC 57.850 50.000 0.40 0.00 40.12 2.93
2137 2349 5.258841 TCTTCATTGGTCAGCAAATCATCT 58.741 37.500 0.00 0.00 0.00 2.90
2241 2453 4.515944 ACACGAAACGAAATGGGAAATGTA 59.484 37.500 0.00 0.00 0.00 2.29
2314 2528 9.032624 AGTATGTACTACAAGGTTTCAGTATGT 57.967 33.333 0.00 0.00 33.74 2.29
2346 2560 7.649306 GCATCTAAACATGACAAGACAAAACTT 59.351 33.333 0.00 0.00 0.00 2.66
2381 2595 5.984233 TTGTCACAACAGCTACTACAAAG 57.016 39.130 0.00 0.00 36.57 2.77
2407 2621 4.942761 AGTTTTTGACACATCAGCCATT 57.057 36.364 0.00 0.00 35.83 3.16
2430 2644 5.116983 CCAGTACTGCAAAAGCAAAATAACG 59.883 40.000 17.86 0.00 0.00 3.18
2612 2827 2.279935 ATCCCTGTAACGCCACAAAA 57.720 45.000 0.00 0.00 0.00 2.44
2855 3070 3.260740 CTCTGATCCACAAAGAGCTGTC 58.739 50.000 0.00 0.00 31.71 3.51
3147 3362 4.202010 CCGCCAGGTACCTTAAAAATCATG 60.202 45.833 13.15 0.00 0.00 3.07
3237 3452 3.341823 CTTTGTGTCTGCATTCCTAGCT 58.658 45.455 0.00 0.00 0.00 3.32
3267 3482 5.640147 AGTCCAAAACAGAATGATTACCCA 58.360 37.500 0.00 0.00 39.69 4.51
3278 3493 6.939730 TGCTATCAAATGTAGTCCAAAACAGA 59.060 34.615 0.00 0.00 0.00 3.41
3279 3494 7.144722 TGCTATCAAATGTAGTCCAAAACAG 57.855 36.000 0.00 0.00 0.00 3.16
3446 3691 8.051535 ACAATGAATCTGGAGAAAGTGTATCAT 58.948 33.333 0.00 0.00 0.00 2.45
3482 3727 3.435186 GCTCTCAAACCAGGCGCC 61.435 66.667 21.89 21.89 0.00 6.53
3693 3939 6.650807 CAGCAGTCCAAGAGTAAATAAGAACA 59.349 38.462 0.00 0.00 0.00 3.18
4040 4289 1.075374 ACCTTGCCCAAACTAGCATGA 59.925 47.619 0.00 0.00 39.11 3.07
4068 4317 3.445096 ACCATTGGCTAGCTAAAAAGCAG 59.555 43.478 18.03 5.74 40.61 4.24
4073 4322 4.844349 AGAGACCATTGGCTAGCTAAAA 57.156 40.909 18.03 8.87 0.00 1.52
4075 4324 4.019321 ACAAAGAGACCATTGGCTAGCTAA 60.019 41.667 16.43 16.43 0.00 3.09
4130 4379 7.361201 CCTGAATTCAAACGTTGATCAGTACAT 60.361 37.037 9.88 2.70 41.71 2.29
4143 4392 2.728846 CGTCCATGCCTGAATTCAAACG 60.729 50.000 9.88 7.14 0.00 3.60
4197 4446 3.129300 CCGCCCAATAGCTCTCGA 58.871 61.111 0.00 0.00 0.00 4.04
4267 4516 7.173735 TGTTCGGAGATGATCAAATGGATATTG 59.826 37.037 0.00 0.00 33.45 1.90
4315 4564 8.950210 CATCAGCCCGTGAGATAATATTTAAAT 58.050 33.333 5.89 5.89 39.07 1.40
4316 4565 7.936847 ACATCAGCCCGTGAGATAATATTTAAA 59.063 33.333 0.00 0.00 39.07 1.52
4317 4566 7.450074 ACATCAGCCCGTGAGATAATATTTAA 58.550 34.615 0.00 0.00 39.07 1.52
4318 4567 7.004555 ACATCAGCCCGTGAGATAATATTTA 57.995 36.000 0.00 0.00 39.07 1.40
4319 4568 5.869579 ACATCAGCCCGTGAGATAATATTT 58.130 37.500 0.00 0.00 39.07 1.40
4320 4569 5.489792 ACATCAGCCCGTGAGATAATATT 57.510 39.130 0.00 0.00 39.07 1.28
4321 4570 6.407412 CCATACATCAGCCCGTGAGATAATAT 60.407 42.308 0.00 0.00 39.07 1.28
4322 4571 5.105351 CCATACATCAGCCCGTGAGATAATA 60.105 44.000 0.00 0.00 39.07 0.98
4323 4572 4.323028 CCATACATCAGCCCGTGAGATAAT 60.323 45.833 0.00 0.00 39.07 1.28
4324 4573 3.006859 CCATACATCAGCCCGTGAGATAA 59.993 47.826 0.00 0.00 39.07 1.75
4325 4574 2.562738 CCATACATCAGCCCGTGAGATA 59.437 50.000 0.00 0.00 39.07 1.98
4326 4575 1.345741 CCATACATCAGCCCGTGAGAT 59.654 52.381 0.00 0.00 39.07 2.75
4353 4602 7.178983 TGAAATGGAGAAAATCAAGTGGCTAAT 59.821 33.333 0.00 0.00 0.00 1.73
4379 4645 7.797038 AAAATGTTTCTTTACTAGACACCGT 57.203 32.000 0.00 0.00 33.48 4.83
4414 4680 9.295825 TGTGATCAATGTTTCTTTACTACCATT 57.704 29.630 0.00 0.00 0.00 3.16
4415 4681 8.862325 TGTGATCAATGTTTCTTTACTACCAT 57.138 30.769 0.00 0.00 0.00 3.55
4416 4682 8.564574 GTTGTGATCAATGTTTCTTTACTACCA 58.435 33.333 0.00 0.00 35.92 3.25
4417 4683 8.784043 AGTTGTGATCAATGTTTCTTTACTACC 58.216 33.333 0.00 0.00 35.92 3.18
4439 4768 4.495349 CGCCTGCAAAGATTGAGATAGTTG 60.495 45.833 0.00 0.00 0.00 3.16
4519 4848 2.347731 GTGATTTCTCTTCCGGTCACC 58.652 52.381 0.00 0.00 32.08 4.02
4636 4965 3.433343 TCGTACCCACCAGAATACAAGA 58.567 45.455 0.00 0.00 0.00 3.02
4665 4994 5.414144 TGATCATTCGGTTGCACTTATTTCA 59.586 36.000 0.00 0.00 0.00 2.69
4667 4996 5.895636 TGATCATTCGGTTGCACTTATTT 57.104 34.783 0.00 0.00 0.00 1.40
4697 5026 3.738745 ATCCATTCCAAGCGCCCCC 62.739 63.158 2.29 0.00 0.00 5.40
4698 5027 2.123726 ATCCATTCCAAGCGCCCC 60.124 61.111 2.29 0.00 0.00 5.80
4699 5028 0.465460 TACATCCATTCCAAGCGCCC 60.465 55.000 2.29 0.00 0.00 6.13
4700 5029 1.388547 TTACATCCATTCCAAGCGCC 58.611 50.000 2.29 0.00 0.00 6.53
4701 5030 3.632189 GAATTACATCCATTCCAAGCGC 58.368 45.455 0.00 0.00 0.00 5.92
4702 5031 3.559655 TCGAATTACATCCATTCCAAGCG 59.440 43.478 0.00 0.00 0.00 4.68
4703 5032 5.695851 ATCGAATTACATCCATTCCAAGC 57.304 39.130 0.00 0.00 0.00 4.01
4704 5033 6.128553 CCGTATCGAATTACATCCATTCCAAG 60.129 42.308 0.00 0.00 0.00 3.61
4705 5034 5.699001 CCGTATCGAATTACATCCATTCCAA 59.301 40.000 0.00 0.00 0.00 3.53
4706 5035 5.011227 TCCGTATCGAATTACATCCATTCCA 59.989 40.000 0.00 0.00 0.00 3.53
4707 5036 5.475719 TCCGTATCGAATTACATCCATTCC 58.524 41.667 0.00 0.00 0.00 3.01
4708 5037 5.062308 GCTCCGTATCGAATTACATCCATTC 59.938 44.000 0.00 0.00 0.00 2.67
4709 5038 4.929808 GCTCCGTATCGAATTACATCCATT 59.070 41.667 0.00 0.00 0.00 3.16
4710 5039 4.220821 AGCTCCGTATCGAATTACATCCAT 59.779 41.667 0.00 0.00 0.00 3.41
4711 5040 3.572682 AGCTCCGTATCGAATTACATCCA 59.427 43.478 0.00 0.00 0.00 3.41
4712 5041 3.921021 CAGCTCCGTATCGAATTACATCC 59.079 47.826 0.00 0.00 0.00 3.51
4713 5042 4.547532 ACAGCTCCGTATCGAATTACATC 58.452 43.478 0.00 0.00 0.00 3.06
4714 5043 4.585955 ACAGCTCCGTATCGAATTACAT 57.414 40.909 0.00 0.00 0.00 2.29
4715 5044 4.380841 AACAGCTCCGTATCGAATTACA 57.619 40.909 0.00 0.00 0.00 2.41
4716 5045 4.802039 TGAAACAGCTCCGTATCGAATTAC 59.198 41.667 0.00 0.00 0.00 1.89
4717 5046 5.001237 TGAAACAGCTCCGTATCGAATTA 57.999 39.130 0.00 0.00 0.00 1.40
4718 5047 3.857052 TGAAACAGCTCCGTATCGAATT 58.143 40.909 0.00 0.00 0.00 2.17
4719 5048 3.119101 ACTGAAACAGCTCCGTATCGAAT 60.119 43.478 0.00 0.00 34.37 3.34
4720 5049 2.230508 ACTGAAACAGCTCCGTATCGAA 59.769 45.455 0.00 0.00 34.37 3.71
4721 5050 1.816835 ACTGAAACAGCTCCGTATCGA 59.183 47.619 0.00 0.00 34.37 3.59
4722 5051 2.279582 ACTGAAACAGCTCCGTATCG 57.720 50.000 0.00 0.00 34.37 2.92
4723 5052 4.326548 GTGTAACTGAAACAGCTCCGTATC 59.673 45.833 0.00 0.00 34.37 2.24
4724 5053 4.243270 GTGTAACTGAAACAGCTCCGTAT 58.757 43.478 0.00 0.00 34.37 3.06
4725 5054 3.645884 GTGTAACTGAAACAGCTCCGTA 58.354 45.455 0.00 0.00 34.37 4.02
4726 5055 2.480845 GTGTAACTGAAACAGCTCCGT 58.519 47.619 0.00 0.00 34.37 4.69
4727 5056 1.455786 CGTGTAACTGAAACAGCTCCG 59.544 52.381 0.00 0.00 34.37 4.63
4728 5057 1.194772 GCGTGTAACTGAAACAGCTCC 59.805 52.381 0.00 0.00 34.37 4.70
4729 5058 1.136611 CGCGTGTAACTGAAACAGCTC 60.137 52.381 0.00 0.00 34.37 4.09
4730 5059 0.859232 CGCGTGTAACTGAAACAGCT 59.141 50.000 0.00 0.00 34.37 4.24
4731 5060 0.110823 CCGCGTGTAACTGAAACAGC 60.111 55.000 4.92 0.00 34.37 4.40
4732 5061 1.493772 TCCGCGTGTAACTGAAACAG 58.506 50.000 4.92 0.00 37.52 3.16
4733 5062 2.063266 GATCCGCGTGTAACTGAAACA 58.937 47.619 4.92 0.00 31.75 2.83
4734 5063 2.063266 TGATCCGCGTGTAACTGAAAC 58.937 47.619 4.92 0.00 31.75 2.78
4735 5064 2.442212 TGATCCGCGTGTAACTGAAA 57.558 45.000 4.92 0.00 31.75 2.69
4736 5065 2.665649 ATGATCCGCGTGTAACTGAA 57.334 45.000 4.92 0.00 31.75 3.02
4737 5066 2.223641 GGTATGATCCGCGTGTAACTGA 60.224 50.000 4.92 0.00 31.75 3.41
4738 5067 2.124903 GGTATGATCCGCGTGTAACTG 58.875 52.381 4.92 0.00 31.75 3.16
4739 5068 1.268896 CGGTATGATCCGCGTGTAACT 60.269 52.381 4.92 0.00 43.96 2.24
4740 5069 1.126079 CGGTATGATCCGCGTGTAAC 58.874 55.000 4.92 0.00 43.96 2.50
4741 5070 3.555401 CGGTATGATCCGCGTGTAA 57.445 52.632 4.92 0.00 43.96 2.41
4749 5078 1.269831 GCTCAGTGACCGGTATGATCC 60.270 57.143 7.34 3.29 0.00 3.36
4750 5079 1.409064 TGCTCAGTGACCGGTATGATC 59.591 52.381 7.34 8.91 0.00 2.92
4751 5080 1.485124 TGCTCAGTGACCGGTATGAT 58.515 50.000 7.34 0.00 0.00 2.45
4752 5081 1.262417 TTGCTCAGTGACCGGTATGA 58.738 50.000 7.34 11.86 0.00 2.15
4753 5082 2.315925 ATTGCTCAGTGACCGGTATG 57.684 50.000 7.34 7.41 0.00 2.39
4754 5083 3.350219 AAATTGCTCAGTGACCGGTAT 57.650 42.857 7.34 0.00 0.00 2.73
4755 5084 2.851263 AAATTGCTCAGTGACCGGTA 57.149 45.000 7.34 0.00 0.00 4.02
4756 5085 2.423577 GTAAATTGCTCAGTGACCGGT 58.576 47.619 6.92 6.92 0.00 5.28
4757 5086 1.393539 CGTAAATTGCTCAGTGACCGG 59.606 52.381 0.00 0.00 0.00 5.28
4758 5087 2.066262 ACGTAAATTGCTCAGTGACCG 58.934 47.619 0.00 0.00 0.00 4.79
4759 5088 3.123621 CAGACGTAAATTGCTCAGTGACC 59.876 47.826 0.00 0.00 0.00 4.02
4760 5089 3.987868 TCAGACGTAAATTGCTCAGTGAC 59.012 43.478 0.00 0.00 0.00 3.67
4761 5090 4.251543 TCAGACGTAAATTGCTCAGTGA 57.748 40.909 0.00 0.00 0.00 3.41
4762 5091 4.990543 TTCAGACGTAAATTGCTCAGTG 57.009 40.909 0.00 0.00 0.00 3.66
4763 5092 6.204688 TCATTTTCAGACGTAAATTGCTCAGT 59.795 34.615 0.00 0.00 0.00 3.41
4764 5093 6.602179 TCATTTTCAGACGTAAATTGCTCAG 58.398 36.000 0.00 0.00 0.00 3.35
4765 5094 6.552859 TCATTTTCAGACGTAAATTGCTCA 57.447 33.333 0.00 0.00 0.00 4.26
4766 5095 7.408290 CGTTTCATTTTCAGACGTAAATTGCTC 60.408 37.037 0.00 0.00 0.00 4.26
4767 5096 6.359617 CGTTTCATTTTCAGACGTAAATTGCT 59.640 34.615 0.00 0.00 0.00 3.91
4768 5097 6.358558 TCGTTTCATTTTCAGACGTAAATTGC 59.641 34.615 0.00 0.00 35.42 3.56
4769 5098 7.406832 CGTCGTTTCATTTTCAGACGTAAATTG 60.407 37.037 7.52 0.00 44.10 2.32
4770 5099 6.572254 CGTCGTTTCATTTTCAGACGTAAATT 59.428 34.615 7.52 0.00 44.10 1.82
4771 5100 6.068931 CGTCGTTTCATTTTCAGACGTAAAT 58.931 36.000 7.52 0.00 44.10 1.40
4772 5101 5.425398 CGTCGTTTCATTTTCAGACGTAAA 58.575 37.500 7.52 0.00 44.10 2.01
4773 5102 4.084952 CCGTCGTTTCATTTTCAGACGTAA 60.085 41.667 13.42 0.00 46.59 3.18
4774 5103 3.426191 CCGTCGTTTCATTTTCAGACGTA 59.574 43.478 13.42 0.00 46.59 3.57
4775 5104 2.220133 CCGTCGTTTCATTTTCAGACGT 59.780 45.455 13.42 0.00 46.59 4.34
4777 5106 3.493503 AGTCCGTCGTTTCATTTTCAGAC 59.506 43.478 0.00 0.00 0.00 3.51
4778 5107 3.493129 CAGTCCGTCGTTTCATTTTCAGA 59.507 43.478 0.00 0.00 0.00 3.27
4779 5108 3.493129 TCAGTCCGTCGTTTCATTTTCAG 59.507 43.478 0.00 0.00 0.00 3.02
4780 5109 3.459145 TCAGTCCGTCGTTTCATTTTCA 58.541 40.909 0.00 0.00 0.00 2.69
4781 5110 3.739300 TCTCAGTCCGTCGTTTCATTTTC 59.261 43.478 0.00 0.00 0.00 2.29
4782 5111 3.493503 GTCTCAGTCCGTCGTTTCATTTT 59.506 43.478 0.00 0.00 0.00 1.82
4783 5112 3.057734 GTCTCAGTCCGTCGTTTCATTT 58.942 45.455 0.00 0.00 0.00 2.32
4784 5113 2.035449 TGTCTCAGTCCGTCGTTTCATT 59.965 45.455 0.00 0.00 0.00 2.57
4785 5114 1.611977 TGTCTCAGTCCGTCGTTTCAT 59.388 47.619 0.00 0.00 0.00 2.57
4786 5115 1.026584 TGTCTCAGTCCGTCGTTTCA 58.973 50.000 0.00 0.00 0.00 2.69
4787 5116 1.986378 CATGTCTCAGTCCGTCGTTTC 59.014 52.381 0.00 0.00 0.00 2.78
4788 5117 1.340248 ACATGTCTCAGTCCGTCGTTT 59.660 47.619 0.00 0.00 0.00 3.60
4789 5118 0.959553 ACATGTCTCAGTCCGTCGTT 59.040 50.000 0.00 0.00 0.00 3.85
4790 5119 1.817357 TACATGTCTCAGTCCGTCGT 58.183 50.000 0.00 0.00 0.00 4.34
4791 5120 3.422417 AATACATGTCTCAGTCCGTCG 57.578 47.619 0.00 0.00 0.00 5.12
4792 5121 7.919091 TGTAAATAATACATGTCTCAGTCCGTC 59.081 37.037 0.00 0.00 0.00 4.79
4793 5122 7.778083 TGTAAATAATACATGTCTCAGTCCGT 58.222 34.615 0.00 0.00 0.00 4.69
4794 5123 8.642908 TTGTAAATAATACATGTCTCAGTCCG 57.357 34.615 0.00 0.00 0.00 4.79
4795 5124 9.601217 ACTTGTAAATAATACATGTCTCAGTCC 57.399 33.333 0.00 0.00 32.59 3.85
4797 5126 9.944376 ACACTTGTAAATAATACATGTCTCAGT 57.056 29.630 0.00 0.00 34.80 3.41
4814 5143 9.219497 CCGTTTTCGTTTTAAATACACTTGTAA 57.781 29.630 0.00 0.00 42.35 2.41
4815 5144 7.375544 GCCGTTTTCGTTTTAAATACACTTGTA 59.624 33.333 0.00 0.00 42.35 2.41
4816 5145 6.196910 GCCGTTTTCGTTTTAAATACACTTGT 59.803 34.615 0.00 0.00 42.35 3.16
4817 5146 6.415573 AGCCGTTTTCGTTTTAAATACACTTG 59.584 34.615 0.00 0.00 42.35 3.16
4818 5147 6.497437 AGCCGTTTTCGTTTTAAATACACTT 58.503 32.000 0.00 0.00 42.35 3.16
4819 5148 6.063640 AGCCGTTTTCGTTTTAAATACACT 57.936 33.333 0.00 0.00 42.35 3.55
4820 5149 7.216881 GGATAGCCGTTTTCGTTTTAAATACAC 59.783 37.037 0.00 0.00 42.35 2.90
4821 5150 7.094890 TGGATAGCCGTTTTCGTTTTAAATACA 60.095 33.333 0.00 0.00 42.35 2.29
4822 5151 7.242783 TGGATAGCCGTTTTCGTTTTAAATAC 58.757 34.615 0.00 0.00 42.35 1.89
4823 5152 7.375106 TGGATAGCCGTTTTCGTTTTAAATA 57.625 32.000 0.00 0.00 42.35 1.40
4824 5153 6.256912 TGGATAGCCGTTTTCGTTTTAAAT 57.743 33.333 0.00 0.00 42.35 1.40
4825 5154 5.686159 TGGATAGCCGTTTTCGTTTTAAA 57.314 34.783 0.00 0.00 42.35 1.52
4826 5155 5.686159 TTGGATAGCCGTTTTCGTTTTAA 57.314 34.783 0.00 0.00 42.35 1.52
4827 5156 5.008415 TGTTTGGATAGCCGTTTTCGTTTTA 59.992 36.000 0.00 0.00 42.35 1.52
4828 5157 4.202030 TGTTTGGATAGCCGTTTTCGTTTT 60.202 37.500 0.00 0.00 42.35 2.43
4829 5158 3.315749 TGTTTGGATAGCCGTTTTCGTTT 59.684 39.130 0.00 0.00 42.35 3.60
4830 5159 2.879646 TGTTTGGATAGCCGTTTTCGTT 59.120 40.909 0.00 0.00 42.35 3.85
4831 5160 2.482721 CTGTTTGGATAGCCGTTTTCGT 59.517 45.455 0.00 0.00 42.35 3.85
4832 5161 2.159572 CCTGTTTGGATAGCCGTTTTCG 60.160 50.000 0.00 0.00 39.77 3.46
4833 5162 2.163613 CCCTGTTTGGATAGCCGTTTTC 59.836 50.000 0.00 0.00 38.35 2.29
4834 5163 2.167662 CCCTGTTTGGATAGCCGTTTT 58.832 47.619 0.00 0.00 38.35 2.43
4835 5164 1.834188 CCCTGTTTGGATAGCCGTTT 58.166 50.000 0.00 0.00 38.35 3.60
4836 5165 0.679960 GCCCTGTTTGGATAGCCGTT 60.680 55.000 0.00 0.00 38.35 4.44
4837 5166 1.077716 GCCCTGTTTGGATAGCCGT 60.078 57.895 0.00 0.00 38.35 5.68
4838 5167 1.823899 GGCCCTGTTTGGATAGCCG 60.824 63.158 0.00 0.00 38.35 5.52
4839 5168 0.843984 TAGGCCCTGTTTGGATAGCC 59.156 55.000 0.00 0.00 39.88 3.93
4840 5169 2.729028 TTAGGCCCTGTTTGGATAGC 57.271 50.000 0.00 0.00 38.35 2.97
4841 5170 4.141390 ACAGATTAGGCCCTGTTTGGATAG 60.141 45.833 6.56 0.00 40.40 2.08
4842 5171 3.785887 ACAGATTAGGCCCTGTTTGGATA 59.214 43.478 6.56 0.00 40.40 2.59
4843 5172 2.582636 ACAGATTAGGCCCTGTTTGGAT 59.417 45.455 6.56 0.00 40.40 3.41
4844 5173 1.992557 ACAGATTAGGCCCTGTTTGGA 59.007 47.619 6.56 0.00 40.40 3.53
4845 5174 2.514458 ACAGATTAGGCCCTGTTTGG 57.486 50.000 6.56 0.00 40.40 3.28
4846 5175 4.142381 GCTTTACAGATTAGGCCCTGTTTG 60.142 45.833 16.24 5.29 42.86 2.93
4847 5176 4.017126 GCTTTACAGATTAGGCCCTGTTT 58.983 43.478 16.24 0.00 42.86 2.83
4848 5177 3.621558 GCTTTACAGATTAGGCCCTGTT 58.378 45.455 16.24 3.22 42.86 3.16
4849 5178 2.420129 CGCTTTACAGATTAGGCCCTGT 60.420 50.000 15.49 15.49 44.81 4.00
4850 5179 2.213499 CGCTTTACAGATTAGGCCCTG 58.787 52.381 0.00 1.32 36.53 4.45
4851 5180 1.141053 CCGCTTTACAGATTAGGCCCT 59.859 52.381 0.00 0.00 0.00 5.19
4852 5181 1.140252 TCCGCTTTACAGATTAGGCCC 59.860 52.381 0.00 0.00 0.00 5.80
4853 5182 2.614829 TCCGCTTTACAGATTAGGCC 57.385 50.000 0.00 0.00 0.00 5.19
4854 5183 2.872858 CCTTCCGCTTTACAGATTAGGC 59.127 50.000 0.00 0.00 0.00 3.93
4855 5184 4.120589 GTCCTTCCGCTTTACAGATTAGG 58.879 47.826 0.00 0.00 0.00 2.69
4856 5185 4.755411 TGTCCTTCCGCTTTACAGATTAG 58.245 43.478 0.00 0.00 0.00 1.73
4857 5186 4.811969 TGTCCTTCCGCTTTACAGATTA 57.188 40.909 0.00 0.00 0.00 1.75
4858 5187 3.695830 TGTCCTTCCGCTTTACAGATT 57.304 42.857 0.00 0.00 0.00 2.40
4859 5188 3.008049 ACTTGTCCTTCCGCTTTACAGAT 59.992 43.478 0.00 0.00 0.00 2.90
4875 5204 1.734465 CAAATCCAGCTCCGACTTGTC 59.266 52.381 0.00 0.00 0.00 3.18
4960 5292 6.384305 AGTTCCATTATGTAGAAGCTGGTACT 59.616 38.462 7.15 0.00 31.89 2.73
5048 5381 1.005394 CGGCAAGGACGTTACAGGT 60.005 57.895 0.00 0.00 0.00 4.00
5437 5782 2.401195 GTGATCAAGGCGCGCTTC 59.599 61.111 32.29 15.82 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.