Multiple sequence alignment - TraesCS1B01G128400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G128400 chr1B 100.000 4710 0 0 1 4710 157898120 157902829 0.000000e+00 8698.0
1 TraesCS1B01G128400 chr1B 75.192 391 60 20 3565 3946 130834851 130835213 2.940000e-32 150.0
2 TraesCS1B01G128400 chr1B 91.837 98 8 0 2193 2290 129095791 129095888 2.290000e-28 137.0
3 TraesCS1B01G128400 chr1D 91.883 1466 68 19 760 2207 102514982 102516414 0.000000e+00 2001.0
4 TraesCS1B01G128400 chr1D 87.868 1632 106 26 2572 4170 102516845 102518417 0.000000e+00 1832.0
5 TraesCS1B01G128400 chr1D 87.435 382 38 6 177 556 102512030 102512403 9.360000e-117 431.0
6 TraesCS1B01G128400 chr1D 92.079 202 7 4 4513 4709 102519293 102519490 4.640000e-70 276.0
7 TraesCS1B01G128400 chr1D 90.431 209 19 1 4301 4509 102518981 102519188 1.670000e-69 274.0
8 TraesCS1B01G128400 chr1D 92.000 125 9 1 543 666 102513680 102513804 1.740000e-39 174.0
9 TraesCS1B01G128400 chr1D 93.396 106 7 0 661 766 102514242 102514347 1.750000e-34 158.0
10 TraesCS1B01G128400 chr1A 89.268 1640 105 27 2572 4183 102373374 102371778 0.000000e+00 1988.0
11 TraesCS1B01G128400 chr1A 91.458 1475 77 19 760 2207 102375260 102373808 0.000000e+00 1980.0
12 TraesCS1B01G128400 chr1A 84.211 513 36 23 4235 4709 102371776 102371271 1.540000e-124 457.0
13 TraesCS1B01G128400 chr1A 88.000 125 14 1 543 666 102379923 102379799 3.800000e-31 147.0
14 TraesCS1B01G128400 chr7B 75.328 381 59 18 3565 3936 60079251 60079605 2.940000e-32 150.0
15 TraesCS1B01G128400 chr7B 89.423 104 9 2 2197 2299 672837024 672837126 3.820000e-26 130.0
16 TraesCS1B01G128400 chr2D 93.548 93 6 0 2198 2290 111343738 111343830 6.360000e-29 139.0
17 TraesCS1B01G128400 chr5B 92.708 96 6 1 2201 2295 322277203 322277298 2.290000e-28 137.0
18 TraesCS1B01G128400 chr7A 92.632 95 6 1 2198 2292 664215712 664215805 8.220000e-28 135.0
19 TraesCS1B01G128400 chr4B 93.478 92 4 2 2201 2292 531092041 531091952 8.220000e-28 135.0
20 TraesCS1B01G128400 chr4A 93.478 92 4 2 2201 2292 507914812 507914723 8.220000e-28 135.0
21 TraesCS1B01G128400 chr2A 93.478 92 5 1 2203 2293 17927570 17927479 8.220000e-28 135.0
22 TraesCS1B01G128400 chr2A 91.892 74 6 0 3039 3112 74650866 74650939 2.320000e-18 104.0
23 TraesCS1B01G128400 chr2A 87.500 80 4 1 3039 3112 74697570 74697649 2.330000e-13 87.9
24 TraesCS1B01G128400 chr3B 91.753 97 7 1 2205 2300 3660856 3660760 2.960000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G128400 chr1B 157898120 157902829 4709 False 8698.000000 8698 100.000000 1 4710 1 chr1B.!!$F3 4709
1 TraesCS1B01G128400 chr1D 102512030 102519490 7460 False 735.142857 2001 90.727429 177 4709 7 chr1D.!!$F1 4532
2 TraesCS1B01G128400 chr1A 102371271 102375260 3989 True 1475.000000 1988 88.312333 760 4709 3 chr1A.!!$R2 3949

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.037790 ACAACAGGAAGAGAGAGCGC 60.038 55.0 0.00 0.00 0.00 5.92 F
318 319 0.110486 AGTGCTCCAACAATTCCCGT 59.890 50.0 0.00 0.00 0.00 5.28 F
707 2443 0.249489 CTTCGAGGCATTAGGGGTCG 60.249 60.0 0.00 0.00 0.00 4.79 F
871 3252 0.399233 ATCCCTCTTTCTCCCCTCGG 60.399 60.0 0.00 0.00 0.00 4.63 F
2699 5274 0.698238 TTCCCCAATGCTACTGCTGT 59.302 50.0 0.66 0.66 40.48 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1867 4268 0.246086 AGCGAGAGACTGCAAGGAAG 59.754 55.000 0.00 0.0 39.3 3.46 R
1973 4374 0.689055 TGAACTCCTGCATGCACTCT 59.311 50.000 18.46 0.0 0.0 3.24 R
2206 4611 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.0 0.0 3.85 R
2708 5283 0.602905 AGCCGAACTTAGTGGTGTGC 60.603 55.000 0.00 0.0 0.0 4.57 R
4327 7329 0.108186 CCATTGTGCCTCAGCTACGA 60.108 55.000 0.00 0.0 40.8 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.032071 GGGTGGTTCGTGGTGGAG 59.968 66.667 0.00 0.00 0.00 3.86
18 19 2.032071 GGTGGTTCGTGGTGGAGG 59.968 66.667 0.00 0.00 0.00 4.30
19 20 2.814835 GGTGGTTCGTGGTGGAGGT 61.815 63.158 0.00 0.00 0.00 3.85
20 21 1.147600 GTGGTTCGTGGTGGAGGTT 59.852 57.895 0.00 0.00 0.00 3.50
21 22 0.393820 GTGGTTCGTGGTGGAGGTTA 59.606 55.000 0.00 0.00 0.00 2.85
22 23 0.682852 TGGTTCGTGGTGGAGGTTAG 59.317 55.000 0.00 0.00 0.00 2.34
23 24 0.971386 GGTTCGTGGTGGAGGTTAGA 59.029 55.000 0.00 0.00 0.00 2.10
24 25 1.067071 GGTTCGTGGTGGAGGTTAGAG 60.067 57.143 0.00 0.00 0.00 2.43
25 26 0.606604 TTCGTGGTGGAGGTTAGAGC 59.393 55.000 0.00 0.00 0.00 4.09
26 27 0.251653 TCGTGGTGGAGGTTAGAGCT 60.252 55.000 0.00 0.00 0.00 4.09
27 28 0.173708 CGTGGTGGAGGTTAGAGCTC 59.826 60.000 5.27 5.27 41.73 4.09
28 29 1.562783 GTGGTGGAGGTTAGAGCTCT 58.437 55.000 22.17 22.17 42.10 4.09
29 30 1.205893 GTGGTGGAGGTTAGAGCTCTG 59.794 57.143 26.78 0.00 42.10 3.35
30 31 0.827368 GGTGGAGGTTAGAGCTCTGG 59.173 60.000 26.78 0.00 42.10 3.86
31 32 1.619977 GGTGGAGGTTAGAGCTCTGGA 60.620 57.143 26.78 11.90 42.10 3.86
32 33 2.393646 GTGGAGGTTAGAGCTCTGGAT 58.606 52.381 26.78 9.30 42.10 3.41
33 34 2.102252 GTGGAGGTTAGAGCTCTGGATG 59.898 54.545 26.78 0.00 42.10 3.51
34 35 2.023984 TGGAGGTTAGAGCTCTGGATGA 60.024 50.000 26.78 2.22 42.10 2.92
35 36 2.627699 GGAGGTTAGAGCTCTGGATGAG 59.372 54.545 26.78 0.00 42.10 2.90
36 37 3.295973 GAGGTTAGAGCTCTGGATGAGT 58.704 50.000 26.78 4.05 44.41 3.41
37 38 3.295973 AGGTTAGAGCTCTGGATGAGTC 58.704 50.000 26.78 6.95 44.41 3.36
38 39 2.034053 GGTTAGAGCTCTGGATGAGTCG 59.966 54.545 26.78 0.00 44.41 4.18
39 40 2.685897 GTTAGAGCTCTGGATGAGTCGT 59.314 50.000 26.78 0.00 44.41 4.34
40 41 2.719531 AGAGCTCTGGATGAGTCGTA 57.280 50.000 17.42 0.00 44.41 3.43
41 42 2.571212 AGAGCTCTGGATGAGTCGTAG 58.429 52.381 17.42 0.00 44.41 3.51
42 43 2.171659 AGAGCTCTGGATGAGTCGTAGA 59.828 50.000 17.42 0.00 44.41 2.59
43 44 2.946329 GAGCTCTGGATGAGTCGTAGAA 59.054 50.000 6.43 0.00 44.41 2.10
44 45 3.357203 AGCTCTGGATGAGTCGTAGAAA 58.643 45.455 0.00 0.00 44.41 2.52
45 46 3.380004 AGCTCTGGATGAGTCGTAGAAAG 59.620 47.826 0.00 0.00 44.41 2.62
46 47 3.378742 GCTCTGGATGAGTCGTAGAAAGA 59.621 47.826 0.00 0.00 44.41 2.52
47 48 4.497340 GCTCTGGATGAGTCGTAGAAAGAG 60.497 50.000 7.97 7.97 44.41 2.85
48 49 4.844884 TCTGGATGAGTCGTAGAAAGAGA 58.155 43.478 0.00 0.00 39.69 3.10
49 50 4.878971 TCTGGATGAGTCGTAGAAAGAGAG 59.121 45.833 0.00 0.00 39.69 3.20
50 51 4.844884 TGGATGAGTCGTAGAAAGAGAGA 58.155 43.478 0.00 0.00 39.69 3.10
51 52 4.878971 TGGATGAGTCGTAGAAAGAGAGAG 59.121 45.833 0.00 0.00 39.69 3.20
52 53 5.120399 GGATGAGTCGTAGAAAGAGAGAGA 58.880 45.833 0.00 0.00 39.69 3.10
53 54 5.007332 GGATGAGTCGTAGAAAGAGAGAGAC 59.993 48.000 0.00 0.00 39.69 3.36
54 55 3.927758 TGAGTCGTAGAAAGAGAGAGACG 59.072 47.826 0.00 0.00 39.69 4.18
55 56 4.175516 GAGTCGTAGAAAGAGAGAGACGA 58.824 47.826 0.00 0.00 39.69 4.20
56 57 4.178540 AGTCGTAGAAAGAGAGAGACGAG 58.821 47.826 0.00 0.00 39.71 4.18
57 58 4.082081 AGTCGTAGAAAGAGAGAGACGAGA 60.082 45.833 0.00 0.00 39.71 4.04
58 59 4.266976 GTCGTAGAAAGAGAGAGACGAGAG 59.733 50.000 0.00 0.00 39.71 3.20
59 60 3.000925 CGTAGAAAGAGAGAGACGAGAGC 59.999 52.174 0.00 0.00 32.20 4.09
60 61 2.006888 AGAAAGAGAGAGACGAGAGCG 58.993 52.381 0.00 0.00 44.79 5.03
61 62 2.004017 GAAAGAGAGAGACGAGAGCGA 58.996 52.381 0.00 0.00 41.64 4.93
62 63 2.325583 AAGAGAGAGACGAGAGCGAT 57.674 50.000 0.00 0.00 41.64 4.58
63 64 1.581934 AGAGAGAGACGAGAGCGATG 58.418 55.000 0.00 0.00 41.64 3.84
64 65 0.586319 GAGAGAGACGAGAGCGATGG 59.414 60.000 0.00 0.00 41.64 3.51
65 66 0.817634 AGAGAGACGAGAGCGATGGG 60.818 60.000 0.00 0.00 41.64 4.00
66 67 1.791103 GAGAGACGAGAGCGATGGGG 61.791 65.000 0.00 0.00 41.64 4.96
67 68 2.043852 AGACGAGAGCGATGGGGT 60.044 61.111 0.00 0.00 41.64 4.95
68 69 0.818445 GAGACGAGAGCGATGGGGTA 60.818 60.000 0.00 0.00 41.64 3.69
69 70 0.820074 AGACGAGAGCGATGGGGTAG 60.820 60.000 0.00 0.00 41.64 3.18
70 71 0.818445 GACGAGAGCGATGGGGTAGA 60.818 60.000 0.00 0.00 41.64 2.59
71 72 0.178987 ACGAGAGCGATGGGGTAGAT 60.179 55.000 0.00 0.00 41.64 1.98
72 73 0.242286 CGAGAGCGATGGGGTAGATG 59.758 60.000 0.00 0.00 40.82 2.90
73 74 1.621992 GAGAGCGATGGGGTAGATGA 58.378 55.000 0.00 0.00 0.00 2.92
74 75 1.543802 GAGAGCGATGGGGTAGATGAG 59.456 57.143 0.00 0.00 0.00 2.90
75 76 1.133325 AGAGCGATGGGGTAGATGAGT 60.133 52.381 0.00 0.00 0.00 3.41
76 77 1.000283 GAGCGATGGGGTAGATGAGTG 60.000 57.143 0.00 0.00 0.00 3.51
77 78 0.753262 GCGATGGGGTAGATGAGTGT 59.247 55.000 0.00 0.00 0.00 3.55
78 79 1.269831 GCGATGGGGTAGATGAGTGTC 60.270 57.143 0.00 0.00 0.00 3.67
79 80 1.001268 CGATGGGGTAGATGAGTGTCG 60.001 57.143 0.00 0.00 0.00 4.35
80 81 2.307768 GATGGGGTAGATGAGTGTCGA 58.692 52.381 0.00 0.00 0.00 4.20
81 82 1.471119 TGGGGTAGATGAGTGTCGAC 58.529 55.000 9.11 9.11 0.00 4.20
82 83 0.381089 GGGGTAGATGAGTGTCGACG 59.619 60.000 11.62 0.00 0.00 5.12
83 84 0.381089 GGGTAGATGAGTGTCGACGG 59.619 60.000 11.62 0.00 0.00 4.79
84 85 0.248539 GGTAGATGAGTGTCGACGGC 60.249 60.000 11.62 6.45 0.00 5.68
85 86 0.589229 GTAGATGAGTGTCGACGGCG 60.589 60.000 2.87 2.87 39.35 6.46
86 87 0.741927 TAGATGAGTGTCGACGGCGA 60.742 55.000 10.67 10.67 45.71 5.54
94 95 3.289062 TCGACGGCGACAACAGGA 61.289 61.111 10.67 0.00 42.51 3.86
95 96 2.355363 CGACGGCGACAACAGGAA 60.355 61.111 16.62 0.00 40.82 3.36
96 97 2.372690 CGACGGCGACAACAGGAAG 61.373 63.158 16.62 0.00 40.82 3.46
97 98 1.006571 GACGGCGACAACAGGAAGA 60.007 57.895 16.62 0.00 0.00 2.87
98 99 1.006102 ACGGCGACAACAGGAAGAG 60.006 57.895 16.62 0.00 0.00 2.85
99 100 1.289066 CGGCGACAACAGGAAGAGA 59.711 57.895 0.00 0.00 0.00 3.10
100 101 0.734253 CGGCGACAACAGGAAGAGAG 60.734 60.000 0.00 0.00 0.00 3.20
101 102 0.603569 GGCGACAACAGGAAGAGAGA 59.396 55.000 0.00 0.00 0.00 3.10
102 103 1.403514 GGCGACAACAGGAAGAGAGAG 60.404 57.143 0.00 0.00 0.00 3.20
103 104 1.989430 CGACAACAGGAAGAGAGAGC 58.011 55.000 0.00 0.00 0.00 4.09
104 105 1.730772 CGACAACAGGAAGAGAGAGCG 60.731 57.143 0.00 0.00 0.00 5.03
105 106 0.037790 ACAACAGGAAGAGAGAGCGC 60.038 55.000 0.00 0.00 0.00 5.92
106 107 0.739112 CAACAGGAAGAGAGAGCGCC 60.739 60.000 2.29 0.00 0.00 6.53
107 108 2.103934 CAGGAAGAGAGAGCGCCG 59.896 66.667 2.29 0.00 0.00 6.46
108 109 2.044848 AGGAAGAGAGAGCGCCGA 60.045 61.111 2.29 0.00 0.00 5.54
109 110 2.118404 AGGAAGAGAGAGCGCCGAG 61.118 63.158 2.29 0.00 0.00 4.63
110 111 2.411290 GAAGAGAGAGCGCCGAGG 59.589 66.667 2.29 0.00 0.00 4.63
111 112 2.044848 AAGAGAGAGCGCCGAGGA 60.045 61.111 2.29 0.00 0.00 3.71
112 113 1.658686 GAAGAGAGAGCGCCGAGGAA 61.659 60.000 2.29 0.00 0.00 3.36
113 114 1.662438 AAGAGAGAGCGCCGAGGAAG 61.662 60.000 2.29 0.00 0.00 3.46
114 115 2.044848 AGAGAGCGCCGAGGAAGA 60.045 61.111 2.29 0.00 0.00 2.87
115 116 1.452145 GAGAGAGCGCCGAGGAAGAT 61.452 60.000 2.29 0.00 0.00 2.40
116 117 1.299773 GAGAGCGCCGAGGAAGATG 60.300 63.158 2.29 0.00 0.00 2.90
117 118 1.729470 GAGAGCGCCGAGGAAGATGA 61.729 60.000 2.29 0.00 0.00 2.92
118 119 1.299773 GAGCGCCGAGGAAGATGAG 60.300 63.158 2.29 0.00 0.00 2.90
119 120 2.964389 GCGCCGAGGAAGATGAGC 60.964 66.667 0.00 0.00 0.00 4.26
120 121 2.656651 CGCCGAGGAAGATGAGCG 60.657 66.667 0.00 0.00 37.39 5.03
121 122 2.808315 GCCGAGGAAGATGAGCGA 59.192 61.111 0.00 0.00 0.00 4.93
122 123 1.299773 GCCGAGGAAGATGAGCGAG 60.300 63.158 0.00 0.00 0.00 5.03
123 124 2.010582 GCCGAGGAAGATGAGCGAGT 62.011 60.000 0.00 0.00 0.00 4.18
124 125 1.309950 CCGAGGAAGATGAGCGAGTA 58.690 55.000 0.00 0.00 0.00 2.59
125 126 1.676529 CCGAGGAAGATGAGCGAGTAA 59.323 52.381 0.00 0.00 0.00 2.24
126 127 2.287308 CCGAGGAAGATGAGCGAGTAAG 60.287 54.545 0.00 0.00 0.00 2.34
127 128 2.614520 CGAGGAAGATGAGCGAGTAAGA 59.385 50.000 0.00 0.00 0.00 2.10
128 129 3.303725 CGAGGAAGATGAGCGAGTAAGAG 60.304 52.174 0.00 0.00 0.00 2.85
129 130 2.360801 AGGAAGATGAGCGAGTAAGAGC 59.639 50.000 0.00 0.00 0.00 4.09
130 131 2.099921 GGAAGATGAGCGAGTAAGAGCA 59.900 50.000 0.00 0.00 35.48 4.26
131 132 3.243704 GGAAGATGAGCGAGTAAGAGCAT 60.244 47.826 0.00 0.00 35.48 3.79
132 133 3.641437 AGATGAGCGAGTAAGAGCATC 57.359 47.619 0.00 0.00 35.48 3.91
133 134 2.954989 AGATGAGCGAGTAAGAGCATCA 59.045 45.455 0.00 0.00 37.82 3.07
134 135 2.568696 TGAGCGAGTAAGAGCATCAC 57.431 50.000 0.00 0.00 37.82 3.06
135 136 2.095461 TGAGCGAGTAAGAGCATCACT 58.905 47.619 0.00 0.00 37.82 3.41
136 137 3.279434 TGAGCGAGTAAGAGCATCACTA 58.721 45.455 0.00 0.00 37.82 2.74
137 138 3.694566 TGAGCGAGTAAGAGCATCACTAA 59.305 43.478 0.00 0.00 37.82 2.24
138 139 4.339530 TGAGCGAGTAAGAGCATCACTAAT 59.660 41.667 0.00 0.00 37.82 1.73
139 140 5.531287 TGAGCGAGTAAGAGCATCACTAATA 59.469 40.000 0.00 0.00 37.82 0.98
140 141 6.007936 AGCGAGTAAGAGCATCACTAATAG 57.992 41.667 0.00 0.00 37.82 1.73
141 142 5.533154 AGCGAGTAAGAGCATCACTAATAGT 59.467 40.000 0.00 0.00 37.82 2.12
142 143 6.711194 AGCGAGTAAGAGCATCACTAATAGTA 59.289 38.462 0.00 0.00 37.82 1.82
143 144 7.228906 AGCGAGTAAGAGCATCACTAATAGTAA 59.771 37.037 0.00 0.00 37.82 2.24
144 145 7.535940 GCGAGTAAGAGCATCACTAATAGTAAG 59.464 40.741 0.00 0.00 37.82 2.34
145 146 8.775527 CGAGTAAGAGCATCACTAATAGTAAGA 58.224 37.037 0.00 0.00 37.82 2.10
147 148 8.573035 AGTAAGAGCATCACTAATAGTAAGAGC 58.427 37.037 0.00 0.00 37.82 4.09
148 149 6.968263 AGAGCATCACTAATAGTAAGAGCA 57.032 37.500 0.00 0.00 37.82 4.26
149 150 7.537596 AGAGCATCACTAATAGTAAGAGCAT 57.462 36.000 0.00 0.00 37.82 3.79
150 151 7.601856 AGAGCATCACTAATAGTAAGAGCATC 58.398 38.462 0.00 0.00 37.82 3.91
151 152 7.232330 AGAGCATCACTAATAGTAAGAGCATCA 59.768 37.037 0.00 0.00 35.12 3.07
152 153 7.151308 AGCATCACTAATAGTAAGAGCATCAC 58.849 38.462 0.00 0.00 37.82 3.06
153 154 7.015098 AGCATCACTAATAGTAAGAGCATCACT 59.985 37.037 0.00 0.00 37.82 3.41
154 155 8.300286 GCATCACTAATAGTAAGAGCATCACTA 58.700 37.037 0.00 0.00 37.82 2.74
165 166 8.573035 AGTAAGAGCATCACTAATAGTAAGAGC 58.427 37.037 0.00 0.00 37.82 4.09
166 167 6.968263 AGAGCATCACTAATAGTAAGAGCA 57.032 37.500 0.00 0.00 37.82 4.26
167 168 7.537596 AGAGCATCACTAATAGTAAGAGCAT 57.462 36.000 0.00 0.00 37.82 3.79
168 169 7.601856 AGAGCATCACTAATAGTAAGAGCATC 58.398 38.462 0.00 0.00 37.82 3.91
169 170 7.232330 AGAGCATCACTAATAGTAAGAGCATCA 59.768 37.037 0.00 0.00 35.12 3.07
170 171 7.151308 AGCATCACTAATAGTAAGAGCATCAC 58.849 38.462 0.00 0.00 37.82 3.06
171 172 7.015098 AGCATCACTAATAGTAAGAGCATCACT 59.985 37.037 0.00 0.00 37.82 3.41
172 173 8.300286 GCATCACTAATAGTAAGAGCATCACTA 58.700 37.037 0.00 0.00 37.82 2.74
183 184 4.809193 AGAGCATCACTAATAGTGGGAGA 58.191 43.478 19.12 1.50 45.94 3.71
205 206 6.074648 AGATGACTCCTGAGGTTAAGGATAG 58.925 44.000 0.00 0.00 42.94 2.08
206 207 5.467668 TGACTCCTGAGGTTAAGGATAGA 57.532 43.478 0.00 0.00 42.94 1.98
281 282 6.239396 TCCCGTAAAAATGTCTGGTTTATGA 58.761 36.000 0.00 0.00 0.00 2.15
292 293 1.072489 TGGTTTATGACGAGTTGGGCA 59.928 47.619 0.00 0.00 0.00 5.36
300 301 2.357637 TGACGAGTTGGGCAAAAGAAAG 59.642 45.455 0.00 0.00 0.00 2.62
311 312 3.520569 GCAAAAGAAAGTGCTCCAACAA 58.479 40.909 0.00 0.00 37.78 2.83
318 319 0.110486 AGTGCTCCAACAATTCCCGT 59.890 50.000 0.00 0.00 0.00 5.28
319 320 1.349688 AGTGCTCCAACAATTCCCGTA 59.650 47.619 0.00 0.00 0.00 4.02
320 321 2.156098 GTGCTCCAACAATTCCCGTAA 58.844 47.619 0.00 0.00 0.00 3.18
321 322 2.554893 GTGCTCCAACAATTCCCGTAAA 59.445 45.455 0.00 0.00 0.00 2.01
322 323 3.004944 GTGCTCCAACAATTCCCGTAAAA 59.995 43.478 0.00 0.00 0.00 1.52
350 351 2.296943 AAGCCTAGGGACCCCAAATA 57.703 50.000 11.72 0.00 38.92 1.40
356 357 4.729868 CCTAGGGACCCCAAATAATCAAG 58.270 47.826 7.00 0.00 38.92 3.02
357 358 4.415512 CCTAGGGACCCCAAATAATCAAGA 59.584 45.833 7.00 0.00 38.92 3.02
376 377 3.108376 AGACAACTCCCCTTCCATCTAC 58.892 50.000 0.00 0.00 0.00 2.59
378 379 0.831307 AACTCCCCTTCCATCTACGC 59.169 55.000 0.00 0.00 0.00 4.42
382 383 2.131709 CCCTTCCATCTACGCGGGA 61.132 63.158 12.47 8.98 33.46 5.14
386 387 1.273606 CTTCCATCTACGCGGGATGAT 59.726 52.381 31.39 18.13 42.02 2.45
391 392 1.410004 TCTACGCGGGATGATCCTTT 58.590 50.000 12.47 0.00 36.57 3.11
403 404 5.510430 GGATGATCCTTTCCCTAAACACTT 58.490 41.667 3.71 0.00 32.53 3.16
419 420 9.715121 CCTAAACACTTCTATAAAACTACCACA 57.285 33.333 0.00 0.00 0.00 4.17
453 456 6.169800 CCACCAACAAATACCATTTTTAGGG 58.830 40.000 0.00 0.00 0.00 3.53
454 457 6.169800 CACCAACAAATACCATTTTTAGGGG 58.830 40.000 0.00 0.00 0.00 4.79
482 485 4.634184 TTTACGGTAACTGCAAAAGCAA 57.366 36.364 0.00 0.00 0.00 3.91
487 490 3.304659 CGGTAACTGCAAAAGCAACTCAT 60.305 43.478 0.00 0.00 0.00 2.90
498 501 2.936202 AGCAACTCATGTGTCAACCTT 58.064 42.857 0.03 0.00 0.00 3.50
511 514 9.784531 CATGTGTCAACCTTCCTTAGATTATAT 57.215 33.333 0.00 0.00 0.00 0.86
611 1903 4.357142 TGTGGCGTCGATTAACTCTAATC 58.643 43.478 0.00 0.00 40.01 1.75
623 1915 1.480219 CTCTAATCGAACGGCCGTGC 61.480 60.000 34.95 31.05 0.00 5.34
672 2408 5.696270 CAGCTGGTTGAATTTAAGGGTTTTC 59.304 40.000 5.57 0.00 0.00 2.29
702 2438 0.465705 TGGAGCTTCGAGGCATTAGG 59.534 55.000 22.42 0.00 34.17 2.69
707 2443 0.249489 CTTCGAGGCATTAGGGGTCG 60.249 60.000 0.00 0.00 0.00 4.79
708 2444 2.280186 CGAGGCATTAGGGGTCGC 60.280 66.667 0.00 0.00 0.00 5.19
712 2448 2.444256 GGCATTAGGGGTCGCTCCT 61.444 63.158 3.71 3.71 38.36 3.69
714 2450 0.756903 GCATTAGGGGTCGCTCCTTA 59.243 55.000 3.53 0.00 35.92 2.69
843 3220 2.958818 ACTTGACTGTACCTCACCTCA 58.041 47.619 0.00 0.00 0.00 3.86
870 3251 1.044611 GATCCCTCTTTCTCCCCTCG 58.955 60.000 0.00 0.00 0.00 4.63
871 3252 0.399233 ATCCCTCTTTCTCCCCTCGG 60.399 60.000 0.00 0.00 0.00 4.63
872 3253 1.306226 CCCTCTTTCTCCCCTCGGT 60.306 63.158 0.00 0.00 0.00 4.69
941 3322 3.272334 GCGCATCCTTAGCACCCG 61.272 66.667 0.30 0.00 0.00 5.28
975 3356 4.484258 GCGAGAGAGCGAGGCGTT 62.484 66.667 0.00 0.00 0.00 4.84
1023 3404 1.073923 GATCGGCCCCAGGTGATTATT 59.926 52.381 0.00 0.00 0.00 1.40
1144 3525 2.363683 GAAGGACTTGCCCAAGATCTG 58.636 52.381 14.46 0.00 40.79 2.90
1294 3679 9.875691 GGCTAAATTAGATCAAGATTTGGTTTT 57.124 29.630 3.88 0.00 0.00 2.43
1377 3774 0.824109 TGTGGCTGGGAGTCTAATCG 59.176 55.000 0.00 0.00 0.00 3.34
1400 3797 2.991250 TCTGGCCAGTTTTAGATCTGC 58.009 47.619 31.58 0.00 0.00 4.26
1419 3816 1.196354 GCTGCAATGTGACTGACTGAC 59.804 52.381 0.00 0.00 0.00 3.51
1429 3826 4.281688 TGTGACTGACTGACTGAATGATGA 59.718 41.667 0.00 0.00 0.00 2.92
1439 3836 4.627035 TGACTGAATGATGACATGAACGTC 59.373 41.667 0.00 4.88 36.79 4.34
1522 3923 2.389715 AGGTACCTGATTCTTCCTCCG 58.610 52.381 15.42 0.00 0.00 4.63
1585 3986 6.855836 TGGATGCTTAATTCATTCTTGTGTC 58.144 36.000 0.00 0.00 0.00 3.67
1681 4082 4.148825 ATCACCGTGCTCCTCGCC 62.149 66.667 0.00 0.00 38.05 5.54
1859 4260 5.927689 GCTGTTTGAATGGTGAATTGATGAA 59.072 36.000 0.00 0.00 0.00 2.57
1861 4262 6.814043 TGTTTGAATGGTGAATTGATGAACA 58.186 32.000 0.00 0.00 0.00 3.18
1867 4268 4.619973 TGGTGAATTGATGAACAAAGTGC 58.380 39.130 0.00 0.00 42.03 4.40
1985 4386 2.415090 GGCTTTAACAGAGTGCATGCAG 60.415 50.000 23.41 12.18 0.00 4.41
1994 4396 2.089980 GAGTGCATGCAGGAGTTCAAT 58.910 47.619 23.41 0.00 0.00 2.57
2008 4410 9.508567 GCAGGAGTTCAATAAATTTAGTGATTC 57.491 33.333 24.34 22.30 37.55 2.52
2021 4423 9.725019 AAATTTAGTGATTCGGCATATATCTGA 57.275 29.630 0.00 0.00 0.00 3.27
2022 4424 9.896645 AATTTAGTGATTCGGCATATATCTGAT 57.103 29.630 0.00 0.00 0.00 2.90
2023 4425 9.896645 ATTTAGTGATTCGGCATATATCTGATT 57.103 29.630 0.00 0.00 0.00 2.57
2024 4426 8.707938 TTAGTGATTCGGCATATATCTGATTG 57.292 34.615 0.00 0.00 0.00 2.67
2025 4427 5.583854 AGTGATTCGGCATATATCTGATTGC 59.416 40.000 4.58 4.58 0.00 3.56
2026 4428 4.567959 TGATTCGGCATATATCTGATTGCG 59.432 41.667 6.69 3.64 35.95 4.85
2051 4453 7.968956 CGTACAAGCTAAGACTTCTATTGAGAA 59.031 37.037 11.18 0.00 39.47 2.87
2052 4454 9.810545 GTACAAGCTAAGACTTCTATTGAGAAT 57.189 33.333 11.18 0.00 40.95 2.40
2121 4523 2.431057 ACCAATCTGTTAGTCCTAGGCG 59.569 50.000 2.96 0.00 0.00 5.52
2122 4524 2.431057 CCAATCTGTTAGTCCTAGGCGT 59.569 50.000 2.96 0.00 0.00 5.68
2126 4528 3.539604 TCTGTTAGTCCTAGGCGTAGAC 58.460 50.000 14.94 10.55 0.00 2.59
2133 4535 1.562942 TCCTAGGCGTAGACAGAAGGA 59.437 52.381 14.94 1.35 39.87 3.36
2140 4542 3.119291 GCGTAGACAGAAGGACATCATG 58.881 50.000 0.00 0.00 0.00 3.07
2156 4561 9.088987 AGGACATCATGGTTTACTAACATTTTT 57.911 29.630 0.00 0.00 35.92 1.94
2174 4579 8.186178 ACATTTTTCTACTGTATCTGCTAACG 57.814 34.615 0.00 0.00 0.00 3.18
2180 4585 6.320171 TCTACTGTATCTGCTAACGTGTTTC 58.680 40.000 0.00 0.00 0.00 2.78
2184 4589 6.016213 TGTATCTGCTAACGTGTTTCAGTA 57.984 37.500 0.00 0.00 0.00 2.74
2185 4590 6.627243 TGTATCTGCTAACGTGTTTCAGTAT 58.373 36.000 0.00 8.37 0.00 2.12
2187 4592 5.839262 TCTGCTAACGTGTTTCAGTATTG 57.161 39.130 0.00 0.00 0.00 1.90
2200 4605 7.704899 GTGTTTCAGTATTGCTTTTGGTTTAGT 59.295 33.333 0.00 0.00 0.00 2.24
2210 4615 7.916914 TGCTTTTGGTTTAGTTATCTACTCC 57.083 36.000 0.00 0.00 38.33 3.85
2211 4616 6.882678 TGCTTTTGGTTTAGTTATCTACTCCC 59.117 38.462 0.00 0.00 38.33 4.30
2212 4617 7.110810 GCTTTTGGTTTAGTTATCTACTCCCT 58.889 38.462 0.00 0.00 38.33 4.20
2213 4618 7.280428 GCTTTTGGTTTAGTTATCTACTCCCTC 59.720 40.741 0.00 0.00 38.33 4.30
2214 4619 6.803366 TTGGTTTAGTTATCTACTCCCTCC 57.197 41.667 0.00 0.00 38.33 4.30
2215 4620 4.891756 TGGTTTAGTTATCTACTCCCTCCG 59.108 45.833 0.00 0.00 38.33 4.63
2216 4621 4.892345 GGTTTAGTTATCTACTCCCTCCGT 59.108 45.833 0.00 0.00 38.33 4.69
2217 4622 5.009510 GGTTTAGTTATCTACTCCCTCCGTC 59.990 48.000 0.00 0.00 38.33 4.79
2218 4623 3.226682 AGTTATCTACTCCCTCCGTCC 57.773 52.381 0.00 0.00 28.23 4.79
2220 4625 1.526315 TATCTACTCCCTCCGTCCCA 58.474 55.000 0.00 0.00 0.00 4.37
2221 4626 0.861155 ATCTACTCCCTCCGTCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
2222 4627 1.526315 TCTACTCCCTCCGTCCCATA 58.474 55.000 0.00 0.00 0.00 2.74
2223 4628 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
2227 4632 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
2229 4634 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
2230 4635 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2231 4636 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2233 4638 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
2234 4639 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
2235 4640 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
2236 4641 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
2237 4642 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
2279 4684 4.976224 AAAACGCCTTACATTATGGGAC 57.024 40.909 0.00 0.00 0.00 4.46
2295 4700 4.546224 TGGGACAGTGGGAGTATATACA 57.454 45.455 15.18 0.00 0.00 2.29
2296 4701 5.087923 TGGGACAGTGGGAGTATATACAT 57.912 43.478 15.18 0.50 0.00 2.29
2297 4702 5.084519 TGGGACAGTGGGAGTATATACATC 58.915 45.833 15.18 9.13 0.00 3.06
2298 4703 5.162870 TGGGACAGTGGGAGTATATACATCT 60.163 44.000 15.18 3.29 0.00 2.90
2299 4704 5.186021 GGGACAGTGGGAGTATATACATCTG 59.814 48.000 15.18 14.95 0.00 2.90
2300 4705 5.336849 GGACAGTGGGAGTATATACATCTGC 60.337 48.000 15.18 0.00 0.00 4.26
2301 4706 4.528596 ACAGTGGGAGTATATACATCTGCC 59.471 45.833 15.18 9.47 39.56 4.85
2302 4707 4.528206 CAGTGGGAGTATATACATCTGCCA 59.472 45.833 15.18 11.81 44.87 4.92
2305 4710 6.702449 TGGGAGTATATACATCTGCCAATT 57.298 37.500 15.18 0.00 44.30 2.32
2306 4711 7.806680 TGGGAGTATATACATCTGCCAATTA 57.193 36.000 15.18 0.00 44.30 1.40
2307 4712 8.392631 TGGGAGTATATACATCTGCCAATTAT 57.607 34.615 15.18 0.00 44.30 1.28
2308 4713 8.486210 TGGGAGTATATACATCTGCCAATTATC 58.514 37.037 15.18 0.00 44.30 1.75
2309 4714 8.486210 GGGAGTATATACATCTGCCAATTATCA 58.514 37.037 15.18 0.00 39.07 2.15
2310 4715 9.890629 GGAGTATATACATCTGCCAATTATCAA 57.109 33.333 15.18 0.00 0.00 2.57
2345 4750 7.492669 AGGTCTATGTTACACTGATTTTCATCG 59.507 37.037 0.00 0.00 31.08 3.84
2346 4751 7.254455 GGTCTATGTTACACTGATTTTCATCGG 60.254 40.741 0.00 0.00 41.19 4.18
2351 4756 6.811665 TGTTACACTGATTTTCATCGGACTAG 59.188 38.462 0.00 0.00 37.97 2.57
2354 4759 4.505922 CACTGATTTTCATCGGACTAGAGC 59.494 45.833 0.00 0.00 37.97 4.09
2359 4764 6.957911 TGATTTTCATCGGACTAGAGCATCTG 60.958 42.308 0.00 0.00 38.01 2.90
2383 4788 5.697633 GGTTATAACGAGGAGAAACACAACA 59.302 40.000 9.46 0.00 0.00 3.33
2389 4794 5.305585 ACGAGGAGAAACACAACATGTATT 58.694 37.500 0.00 0.00 42.31 1.89
2390 4795 6.460781 ACGAGGAGAAACACAACATGTATTA 58.539 36.000 0.00 0.00 42.31 0.98
2392 4797 7.277981 ACGAGGAGAAACACAACATGTATTATC 59.722 37.037 0.00 0.00 42.31 1.75
2397 4803 7.978982 AGAAACACAACATGTATTATCAGAGC 58.021 34.615 0.00 0.00 42.31 4.09
2398 4804 7.607607 AGAAACACAACATGTATTATCAGAGCA 59.392 33.333 0.00 0.00 42.31 4.26
2404 4810 8.478066 ACAACATGTATTATCAGAGCACTAGAA 58.522 33.333 0.00 0.00 0.00 2.10
2426 4832 5.373812 ACAGTGGTTAAGATCCATTAGGG 57.626 43.478 0.00 0.00 37.30 3.53
2448 4854 6.325286 AGGGATAAGTCAACTTAGACATCCTC 59.675 42.308 16.44 10.17 41.24 3.71
2450 4856 6.039493 GGATAAGTCAACTTAGACATCCTCGA 59.961 42.308 12.27 0.00 41.24 4.04
2455 4861 6.097554 AGTCAACTTAGACATCCTCGATGATT 59.902 38.462 8.57 0.00 42.09 2.57
2456 4862 6.419413 GTCAACTTAGACATCCTCGATGATTC 59.581 42.308 8.57 3.35 42.09 2.52
2472 4880 9.964253 CTCGATGATTCTTAAATACATACATGC 57.036 33.333 0.00 0.00 0.00 4.06
2492 4900 6.370166 ACATGCTTCTTAGTACTTTCTGCTTC 59.630 38.462 0.00 0.00 0.00 3.86
2495 4903 7.841956 TGCTTCTTAGTACTTTCTGCTTCTAT 58.158 34.615 0.00 0.00 0.00 1.98
2528 4941 9.643693 TTCATCTTTTCCAATTTATTCTTGAGC 57.356 29.630 0.00 0.00 0.00 4.26
2529 4942 9.028284 TCATCTTTTCCAATTTATTCTTGAGCT 57.972 29.630 0.00 0.00 0.00 4.09
2530 4943 9.084164 CATCTTTTCCAATTTATTCTTGAGCTG 57.916 33.333 0.00 0.00 0.00 4.24
2531 4944 8.408043 TCTTTTCCAATTTATTCTTGAGCTGA 57.592 30.769 0.00 0.00 0.00 4.26
2532 4945 8.299570 TCTTTTCCAATTTATTCTTGAGCTGAC 58.700 33.333 0.00 0.00 0.00 3.51
2533 4946 7.765695 TTTCCAATTTATTCTTGAGCTGACT 57.234 32.000 0.00 0.00 0.00 3.41
2534 4947 6.748333 TCCAATTTATTCTTGAGCTGACTG 57.252 37.500 0.00 0.00 0.00 3.51
2535 4948 6.240894 TCCAATTTATTCTTGAGCTGACTGT 58.759 36.000 0.00 0.00 0.00 3.55
2543 4956 4.026052 TCTTGAGCTGACTGTGGATCATA 58.974 43.478 0.00 0.00 0.00 2.15
2544 4957 3.808466 TGAGCTGACTGTGGATCATAC 57.192 47.619 0.00 0.00 0.00 2.39
2548 4961 4.281657 AGCTGACTGTGGATCATACTACA 58.718 43.478 0.00 0.00 0.00 2.74
2552 4965 7.032580 GCTGACTGTGGATCATACTACATATC 58.967 42.308 0.00 0.00 31.48 1.63
2595 5159 6.939163 GTGCTCACAATGGGATTATATCTTCT 59.061 38.462 0.00 0.00 0.00 2.85
2596 5160 7.118971 GTGCTCACAATGGGATTATATCTTCTC 59.881 40.741 0.00 0.00 0.00 2.87
2645 5209 8.808092 ACTACTAGCATCTATTAAAGGTGGATC 58.192 37.037 0.00 0.00 36.76 3.36
2663 5238 6.942576 GGTGGATCTTATGTGTTTGCCTATAT 59.057 38.462 0.00 0.00 0.00 0.86
2664 5239 8.100791 GGTGGATCTTATGTGTTTGCCTATATA 58.899 37.037 0.00 0.00 0.00 0.86
2687 5262 8.893563 ATATGTCTTTATGTTCTTTTCCCCAA 57.106 30.769 0.00 0.00 0.00 4.12
2690 5265 5.869344 GTCTTTATGTTCTTTTCCCCAATGC 59.131 40.000 0.00 0.00 0.00 3.56
2698 5273 1.838112 TTTCCCCAATGCTACTGCTG 58.162 50.000 0.00 0.00 40.48 4.41
2699 5274 0.698238 TTCCCCAATGCTACTGCTGT 59.302 50.000 0.66 0.66 40.48 4.40
2702 5277 1.210478 CCCCAATGCTACTGCTGTACT 59.790 52.381 0.00 0.00 40.48 2.73
2703 5278 2.283298 CCCAATGCTACTGCTGTACTG 58.717 52.381 0.00 0.00 40.48 2.74
2706 5281 4.503910 CCAATGCTACTGCTGTACTGTAA 58.496 43.478 0.00 0.00 40.48 2.41
2708 5283 5.007039 CCAATGCTACTGCTGTACTGTAATG 59.993 44.000 0.00 0.00 40.48 1.90
2713 5288 3.067106 ACTGCTGTACTGTAATGCACAC 58.933 45.455 10.58 0.00 32.33 3.82
2729 5304 0.756903 ACACCACTAAGTTCGGCTGT 59.243 50.000 0.00 0.00 0.00 4.40
2745 5320 6.032956 TCGGCTGTTGTATTTCTCTAGAAA 57.967 37.500 7.56 7.56 46.60 2.52
2786 5361 6.922247 CAGTTGATGCATTACTCTCTTGAT 57.078 37.500 0.00 0.00 0.00 2.57
2797 5372 8.348507 GCATTACTCTCTTGATAAAATGGAAGG 58.651 37.037 0.00 0.00 0.00 3.46
2803 5378 6.659242 TCTCTTGATAAAATGGAAGGTTGTCC 59.341 38.462 0.00 0.00 38.27 4.02
2819 5397 7.362802 AGGTTGTCCTAAGATGTAGATAACC 57.637 40.000 8.86 8.86 45.61 2.85
2827 5405 2.297597 AGATGTAGATAACCGAGCCTGC 59.702 50.000 0.00 0.00 0.00 4.85
2839 5417 1.432270 GAGCCTGCGTGCCAATACTC 61.432 60.000 0.00 0.00 0.00 2.59
2840 5418 2.813179 GCCTGCGTGCCAATACTCG 61.813 63.158 0.00 0.00 0.00 4.18
2845 5423 1.999051 CGTGCCAATACTCGACAGC 59.001 57.895 0.00 0.00 0.00 4.40
2847 5425 1.656652 GTGCCAATACTCGACAGCAT 58.343 50.000 0.00 0.00 32.11 3.79
2850 5428 1.599542 GCCAATACTCGACAGCATTCC 59.400 52.381 0.00 0.00 0.00 3.01
2863 5441 3.256631 ACAGCATTCCATGAAAGTGTTCC 59.743 43.478 0.00 0.00 32.28 3.62
2866 5444 3.259123 GCATTCCATGAAAGTGTTCCCTT 59.741 43.478 0.00 0.00 32.28 3.95
2867 5445 4.813027 CATTCCATGAAAGTGTTCCCTTG 58.187 43.478 0.00 0.00 32.28 3.61
2881 5459 4.044065 TGTTCCCTTGTCCCTTTGATACAT 59.956 41.667 0.00 0.00 0.00 2.29
2882 5460 4.235079 TCCCTTGTCCCTTTGATACATG 57.765 45.455 0.00 0.00 0.00 3.21
2929 5507 7.826918 AGTAACTACTCCATATCAGACTTCC 57.173 40.000 0.00 0.00 0.00 3.46
2946 5524 4.196971 ACTTCCGTAGCTTTGTTTGAACT 58.803 39.130 0.00 0.00 0.00 3.01
3121 5699 4.526262 TGCAACAAAGGTATGGCATACTTT 59.474 37.500 30.60 27.49 36.72 2.66
3139 5717 7.272084 GCATACTTTCATTCTTGTCAACATGTC 59.728 37.037 0.00 0.00 0.00 3.06
3143 5721 7.230108 ACTTTCATTCTTGTCAACATGTCTCAT 59.770 33.333 0.00 0.00 0.00 2.90
3172 5750 6.040842 GGGGGAAGTTGTATCGTACTGTATTA 59.959 42.308 0.00 0.00 0.00 0.98
3199 5778 2.557924 TGCCCTCACAAACTGCTTATTG 59.442 45.455 0.00 0.00 0.00 1.90
3223 5802 6.262049 TGTTCTGATAAGCAAGTAAGCAACAA 59.738 34.615 0.00 0.00 36.85 2.83
3235 5814 8.499162 GCAAGTAAGCAACAATATCTATTCGAT 58.501 33.333 0.00 0.00 36.11 3.59
3251 5830 9.636879 ATCTATTCGATGTAAGATTCACTGATG 57.363 33.333 0.00 0.00 0.00 3.07
3252 5831 8.850156 TCTATTCGATGTAAGATTCACTGATGA 58.150 33.333 0.00 0.00 0.00 2.92
3365 5949 2.557920 AGTCAGTTCAGCTTCTTGGG 57.442 50.000 0.00 0.00 0.00 4.12
3394 5978 8.480643 ACAGTCAGATAGTTACTTTTGCATAC 57.519 34.615 0.00 0.00 0.00 2.39
3420 6010 1.824230 GCAACAGAATGCCATGGGTTA 59.176 47.619 15.13 0.00 42.53 2.85
3421 6011 2.417243 GCAACAGAATGCCATGGGTTAC 60.417 50.000 15.13 0.00 42.53 2.50
3422 6012 3.091545 CAACAGAATGCCATGGGTTACT 58.908 45.455 15.13 0.00 42.53 2.24
3423 6013 4.269183 CAACAGAATGCCATGGGTTACTA 58.731 43.478 15.13 0.00 42.53 1.82
3424 6014 4.796110 ACAGAATGCCATGGGTTACTAT 57.204 40.909 15.13 0.00 42.53 2.12
3425 6015 5.129368 ACAGAATGCCATGGGTTACTATT 57.871 39.130 15.13 0.00 42.53 1.73
3426 6016 5.518865 ACAGAATGCCATGGGTTACTATTT 58.481 37.500 15.13 0.00 42.53 1.40
3427 6017 6.668645 ACAGAATGCCATGGGTTACTATTTA 58.331 36.000 15.13 0.00 42.53 1.40
3456 6046 5.241506 TCTTTCAACCTTCATTTAGCCTGTG 59.758 40.000 0.00 0.00 0.00 3.66
3485 6075 6.488817 TCCACTTCGCTTTTGTTTACTTTAC 58.511 36.000 0.00 0.00 0.00 2.01
3502 6092 2.812358 TACGAGCTCTGCTTTTGTGA 57.188 45.000 12.85 0.00 39.88 3.58
3560 6150 5.160641 TGTGTTCTTTGTTGAAGCTTGTTC 58.839 37.500 2.10 0.00 35.24 3.18
3891 6481 6.185511 AGCCCTAGGTAAATTTACACTTTCC 58.814 40.000 25.59 10.61 35.37 3.13
3913 6507 5.724854 TCCCCTGTACTAAAGAGCATACTTT 59.275 40.000 0.00 0.00 41.90 2.66
3914 6508 6.049790 CCCCTGTACTAAAGAGCATACTTTC 58.950 44.000 6.79 0.00 40.09 2.62
3915 6509 6.127026 CCCCTGTACTAAAGAGCATACTTTCT 60.127 42.308 6.79 0.00 40.09 2.52
3916 6510 7.331791 CCCTGTACTAAAGAGCATACTTTCTT 58.668 38.462 6.79 0.00 40.09 2.52
4049 6643 1.612462 CCTGCCTGAGTTCTTGCATGA 60.612 52.381 0.00 0.00 32.53 3.07
4050 6644 1.467734 CTGCCTGAGTTCTTGCATGAC 59.532 52.381 1.02 0.00 32.53 3.06
4051 6645 1.072806 TGCCTGAGTTCTTGCATGACT 59.927 47.619 1.02 3.43 0.00 3.41
4052 6646 2.302733 TGCCTGAGTTCTTGCATGACTA 59.697 45.455 1.02 0.00 0.00 2.59
4063 6671 0.543749 GCATGACTAGCCTTGGAGGT 59.456 55.000 0.00 0.00 37.80 3.85
4075 6684 3.139077 CCTTGGAGGTGTAGTTGTTGTC 58.861 50.000 0.00 0.00 0.00 3.18
4100 6709 6.142798 CGTTGAACCTTGAATCAATTTCACAG 59.857 38.462 15.54 10.78 43.99 3.66
4120 6730 4.826733 ACAGCAAATTCACCATCTTGTACA 59.173 37.500 0.00 0.00 0.00 2.90
4127 6737 4.365514 TCACCATCTTGTACACATGGTT 57.634 40.909 26.31 14.74 43.12 3.67
4151 6761 0.834687 ACCCTAACCTTGTCGCCTCA 60.835 55.000 0.00 0.00 0.00 3.86
4176 6786 8.341173 CAATGAGAGCTTTGTCTAATACATTCC 58.659 37.037 0.00 0.00 38.10 3.01
4183 6793 6.074994 GCTTTGTCTAATACATTCCGACGTAG 60.075 42.308 0.00 0.00 38.10 3.51
4184 6794 6.682423 TTGTCTAATACATTCCGACGTAGA 57.318 37.500 0.00 0.00 38.10 2.59
4185 6795 6.296365 TGTCTAATACATTCCGACGTAGAG 57.704 41.667 0.00 0.00 31.43 2.43
4186 6796 5.819379 TGTCTAATACATTCCGACGTAGAGT 59.181 40.000 0.00 0.00 31.43 3.24
4187 6797 6.134730 GTCTAATACATTCCGACGTAGAGTG 58.865 44.000 8.49 8.49 0.00 3.51
4188 6798 3.984508 ATACATTCCGACGTAGAGTGG 57.015 47.619 13.06 0.90 0.00 4.00
4189 6799 1.830279 ACATTCCGACGTAGAGTGGA 58.170 50.000 13.06 3.01 0.00 4.02
4190 6800 2.376109 ACATTCCGACGTAGAGTGGAT 58.624 47.619 13.06 0.00 32.70 3.41
4191 6801 2.358267 ACATTCCGACGTAGAGTGGATC 59.642 50.000 13.06 0.00 32.70 3.36
4192 6802 2.414994 TTCCGACGTAGAGTGGATCT 57.585 50.000 0.00 0.00 42.47 2.75
4193 6803 1.950828 TCCGACGTAGAGTGGATCTC 58.049 55.000 0.00 0.00 43.05 2.75
4194 6804 0.582482 CCGACGTAGAGTGGATCTCG 59.418 60.000 0.00 0.00 46.86 4.04
4195 6805 0.582482 CGACGTAGAGTGGATCTCGG 59.418 60.000 0.00 0.00 46.86 4.63
4196 6806 0.308376 GACGTAGAGTGGATCTCGGC 59.692 60.000 0.00 0.00 46.86 5.54
4197 6807 1.102222 ACGTAGAGTGGATCTCGGCC 61.102 60.000 0.00 0.00 46.86 6.13
4198 6808 0.820074 CGTAGAGTGGATCTCGGCCT 60.820 60.000 0.00 0.00 46.86 5.19
4199 6809 1.404843 GTAGAGTGGATCTCGGCCTT 58.595 55.000 0.00 0.00 46.86 4.35
4200 6810 2.584236 GTAGAGTGGATCTCGGCCTTA 58.416 52.381 0.00 0.00 46.86 2.69
4201 6811 2.160721 AGAGTGGATCTCGGCCTTAA 57.839 50.000 0.00 0.00 46.86 1.85
4202 6812 2.467880 AGAGTGGATCTCGGCCTTAAA 58.532 47.619 0.00 0.00 46.86 1.52
4203 6813 2.432510 AGAGTGGATCTCGGCCTTAAAG 59.567 50.000 0.00 0.00 46.86 1.85
4204 6814 2.431057 GAGTGGATCTCGGCCTTAAAGA 59.569 50.000 0.00 0.00 33.25 2.52
4205 6815 2.168728 AGTGGATCTCGGCCTTAAAGAC 59.831 50.000 0.00 0.00 0.00 3.01
4206 6816 1.485066 TGGATCTCGGCCTTAAAGACC 59.515 52.381 0.00 4.09 0.00 3.85
4214 6824 3.162202 GGCCTTAAAGACCGACTCTAC 57.838 52.381 0.00 0.00 0.00 2.59
4215 6825 2.494870 GGCCTTAAAGACCGACTCTACA 59.505 50.000 0.00 0.00 0.00 2.74
4216 6826 3.132467 GGCCTTAAAGACCGACTCTACAT 59.868 47.826 0.00 0.00 0.00 2.29
4217 6827 4.382793 GGCCTTAAAGACCGACTCTACATT 60.383 45.833 0.00 0.00 0.00 2.71
4218 6828 4.804665 GCCTTAAAGACCGACTCTACATTC 59.195 45.833 0.00 0.00 0.00 2.67
4219 6829 5.394333 GCCTTAAAGACCGACTCTACATTCT 60.394 44.000 0.00 0.00 0.00 2.40
4220 6830 6.037098 CCTTAAAGACCGACTCTACATTCTG 58.963 44.000 0.00 0.00 0.00 3.02
4221 6831 6.127703 CCTTAAAGACCGACTCTACATTCTGA 60.128 42.308 0.00 0.00 0.00 3.27
4222 6832 4.705337 AAGACCGACTCTACATTCTGAC 57.295 45.455 0.00 0.00 0.00 3.51
4223 6833 2.678836 AGACCGACTCTACATTCTGACG 59.321 50.000 0.00 0.00 0.00 4.35
4224 6834 2.419324 GACCGACTCTACATTCTGACGT 59.581 50.000 0.00 0.00 0.00 4.34
4225 6835 3.603532 ACCGACTCTACATTCTGACGTA 58.396 45.455 0.00 0.00 0.00 3.57
4226 6836 4.005650 ACCGACTCTACATTCTGACGTAA 58.994 43.478 0.00 0.00 0.00 3.18
4286 6896 0.393402 CAGTTGCCATCTGCCTAGCA 60.393 55.000 0.00 0.00 40.16 3.49
4296 6906 0.755079 CTGCCTAGCATAGCACCTGA 59.245 55.000 0.00 0.00 38.13 3.86
4297 6907 1.347050 CTGCCTAGCATAGCACCTGAT 59.653 52.381 0.00 0.00 38.13 2.90
4327 7329 9.552695 ACTAAAACCCTAACCTATGTACTAAGT 57.447 33.333 0.00 0.00 0.00 2.24
4346 7348 0.108186 TCGTAGCTGAGGCACAATGG 60.108 55.000 0.00 0.00 41.70 3.16
4354 7357 2.238646 CTGAGGCACAATGGTTACCCTA 59.761 50.000 0.00 0.00 0.00 3.53
4364 7367 1.209621 GGTTACCCTACCTGCCATCA 58.790 55.000 0.00 0.00 35.23 3.07
4371 7374 1.960040 CTACCTGCCATCAGCCGTCA 61.960 60.000 0.00 0.00 42.71 4.35
4376 7379 3.056313 GCCATCAGCCGTCAAAGCC 62.056 63.158 0.00 0.00 34.35 4.35
4389 7392 1.303561 AAAGCCGGCATGCAGAGAA 60.304 52.632 31.54 0.00 0.00 2.87
4400 7491 3.841643 CATGCAGAGAAAAGGCGAATTT 58.158 40.909 0.00 0.00 0.00 1.82
4402 7493 2.622942 TGCAGAGAAAAGGCGAATTTGT 59.377 40.909 0.00 0.00 0.00 2.83
4475 7567 2.680339 GCGAGAGGGGAAAAGAAGAATG 59.320 50.000 0.00 0.00 0.00 2.67
4568 7761 4.346970 TGTGACAACAAACAATACGCAAG 58.653 39.130 0.00 0.00 36.92 4.01
4588 7782 6.305638 CGCAAGAAAAAGTGATAACTTAAGCC 59.694 38.462 1.29 0.00 43.02 4.35
4589 7783 6.586463 GCAAGAAAAAGTGATAACTTAAGCCC 59.414 38.462 1.29 0.00 0.00 5.19
4624 7822 9.612620 GTGATACAGTAAAACATCAAGGAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
4625 7823 9.567776 TGATACAGTAAAACATCAAGGAAAAGA 57.432 29.630 0.00 0.00 0.00 2.52
4639 7837 7.230747 TCAAGGAAAAGAAACCATGAGTGATA 58.769 34.615 0.00 0.00 31.68 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.032071 CTCCACCACGAACCACCC 59.968 66.667 0.00 0.00 0.00 4.61
1 2 2.032071 CCTCCACCACGAACCACC 59.968 66.667 0.00 0.00 0.00 4.61
2 3 0.393820 TAACCTCCACCACGAACCAC 59.606 55.000 0.00 0.00 0.00 4.16
3 4 0.682852 CTAACCTCCACCACGAACCA 59.317 55.000 0.00 0.00 0.00 3.67
4 5 0.971386 TCTAACCTCCACCACGAACC 59.029 55.000 0.00 0.00 0.00 3.62
5 6 1.672145 GCTCTAACCTCCACCACGAAC 60.672 57.143 0.00 0.00 0.00 3.95
6 7 0.606604 GCTCTAACCTCCACCACGAA 59.393 55.000 0.00 0.00 0.00 3.85
7 8 0.251653 AGCTCTAACCTCCACCACGA 60.252 55.000 0.00 0.00 0.00 4.35
8 9 0.173708 GAGCTCTAACCTCCACCACG 59.826 60.000 6.43 0.00 0.00 4.94
9 10 1.205893 CAGAGCTCTAACCTCCACCAC 59.794 57.143 17.75 0.00 0.00 4.16
10 11 1.561643 CAGAGCTCTAACCTCCACCA 58.438 55.000 17.75 0.00 0.00 4.17
11 12 0.827368 CCAGAGCTCTAACCTCCACC 59.173 60.000 17.75 0.00 0.00 4.61
12 13 1.853963 TCCAGAGCTCTAACCTCCAC 58.146 55.000 17.75 0.00 0.00 4.02
13 14 2.023984 TCATCCAGAGCTCTAACCTCCA 60.024 50.000 17.75 0.00 0.00 3.86
14 15 2.627699 CTCATCCAGAGCTCTAACCTCC 59.372 54.545 17.75 0.00 37.59 4.30
26 27 4.844884 TCTCTTTCTACGACTCATCCAGA 58.155 43.478 0.00 0.00 0.00 3.86
27 28 4.878971 TCTCTCTTTCTACGACTCATCCAG 59.121 45.833 0.00 0.00 0.00 3.86
28 29 4.844884 TCTCTCTTTCTACGACTCATCCA 58.155 43.478 0.00 0.00 0.00 3.41
29 30 5.007332 GTCTCTCTCTTTCTACGACTCATCC 59.993 48.000 0.00 0.00 0.00 3.51
30 31 5.276678 CGTCTCTCTCTTTCTACGACTCATC 60.277 48.000 0.00 0.00 32.35 2.92
31 32 4.569162 CGTCTCTCTCTTTCTACGACTCAT 59.431 45.833 0.00 0.00 32.35 2.90
32 33 3.927758 CGTCTCTCTCTTTCTACGACTCA 59.072 47.826 0.00 0.00 32.35 3.41
33 34 4.175516 TCGTCTCTCTCTTTCTACGACTC 58.824 47.826 0.00 0.00 34.74 3.36
34 35 4.082081 TCTCGTCTCTCTCTTTCTACGACT 60.082 45.833 0.00 0.00 35.69 4.18
35 36 4.175516 TCTCGTCTCTCTCTTTCTACGAC 58.824 47.826 0.00 0.00 35.69 4.34
36 37 4.426416 CTCTCGTCTCTCTCTTTCTACGA 58.574 47.826 0.00 0.00 37.72 3.43
37 38 3.000925 GCTCTCGTCTCTCTCTTTCTACG 59.999 52.174 0.00 0.00 0.00 3.51
38 39 3.000925 CGCTCTCGTCTCTCTCTTTCTAC 59.999 52.174 0.00 0.00 0.00 2.59
39 40 3.119065 TCGCTCTCGTCTCTCTCTTTCTA 60.119 47.826 0.00 0.00 36.96 2.10
40 41 2.006888 CGCTCTCGTCTCTCTCTTTCT 58.993 52.381 0.00 0.00 0.00 2.52
41 42 2.004017 TCGCTCTCGTCTCTCTCTTTC 58.996 52.381 0.00 0.00 36.96 2.62
42 43 2.102070 TCGCTCTCGTCTCTCTCTTT 57.898 50.000 0.00 0.00 36.96 2.52
43 44 1.939934 CATCGCTCTCGTCTCTCTCTT 59.060 52.381 0.00 0.00 36.96 2.85
44 45 1.581934 CATCGCTCTCGTCTCTCTCT 58.418 55.000 0.00 0.00 36.96 3.10
45 46 0.586319 CCATCGCTCTCGTCTCTCTC 59.414 60.000 0.00 0.00 36.96 3.20
46 47 0.817634 CCCATCGCTCTCGTCTCTCT 60.818 60.000 0.00 0.00 36.96 3.10
47 48 1.652012 CCCATCGCTCTCGTCTCTC 59.348 63.158 0.00 0.00 36.96 3.20
48 49 1.826054 CCCCATCGCTCTCGTCTCT 60.826 63.158 0.00 0.00 36.96 3.10
49 50 0.818445 TACCCCATCGCTCTCGTCTC 60.818 60.000 0.00 0.00 36.96 3.36
50 51 0.820074 CTACCCCATCGCTCTCGTCT 60.820 60.000 0.00 0.00 36.96 4.18
51 52 0.818445 TCTACCCCATCGCTCTCGTC 60.818 60.000 0.00 0.00 36.96 4.20
52 53 0.178987 ATCTACCCCATCGCTCTCGT 60.179 55.000 0.00 0.00 36.96 4.18
53 54 0.242286 CATCTACCCCATCGCTCTCG 59.758 60.000 0.00 0.00 0.00 4.04
54 55 1.543802 CTCATCTACCCCATCGCTCTC 59.456 57.143 0.00 0.00 0.00 3.20
55 56 1.133325 ACTCATCTACCCCATCGCTCT 60.133 52.381 0.00 0.00 0.00 4.09
56 57 1.000283 CACTCATCTACCCCATCGCTC 60.000 57.143 0.00 0.00 0.00 5.03
57 58 1.043816 CACTCATCTACCCCATCGCT 58.956 55.000 0.00 0.00 0.00 4.93
58 59 0.753262 ACACTCATCTACCCCATCGC 59.247 55.000 0.00 0.00 0.00 4.58
59 60 1.001268 CGACACTCATCTACCCCATCG 60.001 57.143 0.00 0.00 0.00 3.84
60 61 2.034812 GTCGACACTCATCTACCCCATC 59.965 54.545 11.55 0.00 0.00 3.51
61 62 2.032620 GTCGACACTCATCTACCCCAT 58.967 52.381 11.55 0.00 0.00 4.00
62 63 1.471119 GTCGACACTCATCTACCCCA 58.529 55.000 11.55 0.00 0.00 4.96
63 64 0.381089 CGTCGACACTCATCTACCCC 59.619 60.000 17.16 0.00 0.00 4.95
64 65 0.381089 CCGTCGACACTCATCTACCC 59.619 60.000 17.16 0.00 0.00 3.69
65 66 0.248539 GCCGTCGACACTCATCTACC 60.249 60.000 17.16 0.00 0.00 3.18
66 67 0.589229 CGCCGTCGACACTCATCTAC 60.589 60.000 17.16 0.00 38.10 2.59
67 68 0.741927 TCGCCGTCGACACTCATCTA 60.742 55.000 17.16 0.00 40.21 1.98
68 69 2.038837 TCGCCGTCGACACTCATCT 61.039 57.895 17.16 0.00 40.21 2.90
69 70 2.483745 TCGCCGTCGACACTCATC 59.516 61.111 17.16 0.00 40.21 2.92
77 78 2.742710 CTTCCTGTTGTCGCCGTCGA 62.743 60.000 0.00 0.00 43.28 4.20
78 79 2.355363 TTCCTGTTGTCGCCGTCG 60.355 61.111 0.00 0.00 0.00 5.12
79 80 1.006571 TCTTCCTGTTGTCGCCGTC 60.007 57.895 0.00 0.00 0.00 4.79
80 81 1.006102 CTCTTCCTGTTGTCGCCGT 60.006 57.895 0.00 0.00 0.00 5.68
81 82 0.734253 CTCTCTTCCTGTTGTCGCCG 60.734 60.000 0.00 0.00 0.00 6.46
82 83 0.603569 TCTCTCTTCCTGTTGTCGCC 59.396 55.000 0.00 0.00 0.00 5.54
83 84 1.989430 CTCTCTCTTCCTGTTGTCGC 58.011 55.000 0.00 0.00 0.00 5.19
84 85 1.730772 CGCTCTCTCTTCCTGTTGTCG 60.731 57.143 0.00 0.00 0.00 4.35
85 86 1.989430 CGCTCTCTCTTCCTGTTGTC 58.011 55.000 0.00 0.00 0.00 3.18
86 87 0.037790 GCGCTCTCTCTTCCTGTTGT 60.038 55.000 0.00 0.00 0.00 3.32
87 88 0.739112 GGCGCTCTCTCTTCCTGTTG 60.739 60.000 7.64 0.00 0.00 3.33
88 89 1.594310 GGCGCTCTCTCTTCCTGTT 59.406 57.895 7.64 0.00 0.00 3.16
89 90 2.705821 CGGCGCTCTCTCTTCCTGT 61.706 63.158 7.64 0.00 0.00 4.00
90 91 2.103934 CGGCGCTCTCTCTTCCTG 59.896 66.667 7.64 0.00 0.00 3.86
91 92 2.044848 TCGGCGCTCTCTCTTCCT 60.045 61.111 7.64 0.00 0.00 3.36
92 93 2.411290 CTCGGCGCTCTCTCTTCC 59.589 66.667 7.64 0.00 0.00 3.46
93 94 1.658686 TTCCTCGGCGCTCTCTCTTC 61.659 60.000 7.64 0.00 0.00 2.87
94 95 1.662438 CTTCCTCGGCGCTCTCTCTT 61.662 60.000 7.64 0.00 0.00 2.85
95 96 2.044848 TTCCTCGGCGCTCTCTCT 60.045 61.111 7.64 0.00 0.00 3.10
96 97 1.452145 ATCTTCCTCGGCGCTCTCTC 61.452 60.000 7.64 0.00 0.00 3.20
97 98 1.454847 ATCTTCCTCGGCGCTCTCT 60.455 57.895 7.64 0.00 0.00 3.10
98 99 1.299773 CATCTTCCTCGGCGCTCTC 60.300 63.158 7.64 0.00 0.00 3.20
99 100 1.733402 CTCATCTTCCTCGGCGCTCT 61.733 60.000 7.64 0.00 0.00 4.09
100 101 1.299773 CTCATCTTCCTCGGCGCTC 60.300 63.158 7.64 0.00 0.00 5.03
101 102 2.811101 CTCATCTTCCTCGGCGCT 59.189 61.111 7.64 0.00 0.00 5.92
102 103 2.964389 GCTCATCTTCCTCGGCGC 60.964 66.667 0.00 0.00 0.00 6.53
103 104 2.656651 CGCTCATCTTCCTCGGCG 60.657 66.667 0.00 0.00 36.89 6.46
104 105 1.299773 CTCGCTCATCTTCCTCGGC 60.300 63.158 0.00 0.00 0.00 5.54
105 106 1.309950 TACTCGCTCATCTTCCTCGG 58.690 55.000 0.00 0.00 0.00 4.63
106 107 2.614520 TCTTACTCGCTCATCTTCCTCG 59.385 50.000 0.00 0.00 0.00 4.63
107 108 3.550030 GCTCTTACTCGCTCATCTTCCTC 60.550 52.174 0.00 0.00 0.00 3.71
108 109 2.360801 GCTCTTACTCGCTCATCTTCCT 59.639 50.000 0.00 0.00 0.00 3.36
109 110 2.099921 TGCTCTTACTCGCTCATCTTCC 59.900 50.000 0.00 0.00 0.00 3.46
110 111 3.428746 TGCTCTTACTCGCTCATCTTC 57.571 47.619 0.00 0.00 0.00 2.87
111 112 3.382865 TGATGCTCTTACTCGCTCATCTT 59.617 43.478 0.00 0.00 33.48 2.40
112 113 2.954989 TGATGCTCTTACTCGCTCATCT 59.045 45.455 0.00 0.00 33.48 2.90
113 114 3.049206 GTGATGCTCTTACTCGCTCATC 58.951 50.000 0.00 0.00 0.00 2.92
114 115 2.692557 AGTGATGCTCTTACTCGCTCAT 59.307 45.455 0.00 0.00 0.00 2.90
115 116 2.095461 AGTGATGCTCTTACTCGCTCA 58.905 47.619 0.00 0.00 0.00 4.26
116 117 2.861462 AGTGATGCTCTTACTCGCTC 57.139 50.000 0.00 0.00 0.00 5.03
117 118 4.927978 ATTAGTGATGCTCTTACTCGCT 57.072 40.909 0.00 0.00 34.37 4.93
118 119 5.764131 ACTATTAGTGATGCTCTTACTCGC 58.236 41.667 0.00 0.00 0.00 5.03
119 120 8.775527 TCTTACTATTAGTGATGCTCTTACTCG 58.224 37.037 6.60 0.00 0.00 4.18
121 122 8.573035 GCTCTTACTATTAGTGATGCTCTTACT 58.427 37.037 6.60 0.00 0.00 2.24
122 123 8.353684 TGCTCTTACTATTAGTGATGCTCTTAC 58.646 37.037 6.60 0.00 0.00 2.34
123 124 8.465273 TGCTCTTACTATTAGTGATGCTCTTA 57.535 34.615 6.60 0.00 0.00 2.10
124 125 7.353414 TGCTCTTACTATTAGTGATGCTCTT 57.647 36.000 6.60 0.00 0.00 2.85
125 126 6.968263 TGCTCTTACTATTAGTGATGCTCT 57.032 37.500 6.60 0.00 0.00 4.09
126 127 7.328249 GTGATGCTCTTACTATTAGTGATGCTC 59.672 40.741 6.60 6.49 0.00 4.26
127 128 7.015098 AGTGATGCTCTTACTATTAGTGATGCT 59.985 37.037 6.60 0.00 0.00 3.79
128 129 7.151308 AGTGATGCTCTTACTATTAGTGATGC 58.849 38.462 6.60 6.68 0.00 3.91
139 140 8.573035 GCTCTTACTATTAGTGATGCTCTTACT 58.427 37.037 6.60 0.00 0.00 2.24
140 141 8.353684 TGCTCTTACTATTAGTGATGCTCTTAC 58.646 37.037 6.60 0.00 0.00 2.34
141 142 8.465273 TGCTCTTACTATTAGTGATGCTCTTA 57.535 34.615 6.60 0.00 0.00 2.10
142 143 7.353414 TGCTCTTACTATTAGTGATGCTCTT 57.647 36.000 6.60 0.00 0.00 2.85
143 144 6.968263 TGCTCTTACTATTAGTGATGCTCT 57.032 37.500 6.60 0.00 0.00 4.09
144 145 7.328249 GTGATGCTCTTACTATTAGTGATGCTC 59.672 40.741 6.60 6.49 0.00 4.26
145 146 7.015098 AGTGATGCTCTTACTATTAGTGATGCT 59.985 37.037 6.60 0.00 0.00 3.79
146 147 7.151308 AGTGATGCTCTTACTATTAGTGATGC 58.849 38.462 6.60 6.68 0.00 3.91
163 164 8.878426 GAGTCATCTCCCACTATTAGTGATGCT 61.878 44.444 22.61 17.02 45.59 3.79
164 165 6.792846 GAGTCATCTCCCACTATTAGTGATGC 60.793 46.154 22.61 13.79 45.59 3.91
165 166 6.686630 GAGTCATCTCCCACTATTAGTGATG 58.313 44.000 22.61 17.33 45.59 3.07
166 167 6.909550 GAGTCATCTCCCACTATTAGTGAT 57.090 41.667 22.61 7.50 45.59 3.06
183 184 6.031964 TCTATCCTTAACCTCAGGAGTCAT 57.968 41.667 0.00 0.00 43.96 3.06
225 226 4.927978 ATTAGTGATGCTCTTACTCGCT 57.072 40.909 0.00 0.00 34.37 4.93
227 228 7.644490 AGAACTATTAGTGATGCTCTTACTCG 58.356 38.462 0.00 0.00 0.00 4.18
281 282 2.099098 CACTTTCTTTTGCCCAACTCGT 59.901 45.455 0.00 0.00 0.00 4.18
292 293 5.359756 GGAATTGTTGGAGCACTTTCTTTT 58.640 37.500 0.00 0.00 0.00 2.27
300 301 1.816074 TACGGGAATTGTTGGAGCAC 58.184 50.000 0.00 0.00 0.00 4.40
329 330 1.163408 TTTGGGGTCCCTAGGCTTTT 58.837 50.000 8.15 0.00 36.94 2.27
330 331 1.393468 ATTTGGGGTCCCTAGGCTTT 58.607 50.000 8.15 0.00 36.94 3.51
331 332 2.296943 TATTTGGGGTCCCTAGGCTT 57.703 50.000 8.15 0.00 36.94 4.35
332 333 2.296943 TTATTTGGGGTCCCTAGGCT 57.703 50.000 8.15 0.00 36.94 4.58
333 334 2.445525 TGATTATTTGGGGTCCCTAGGC 59.554 50.000 8.15 0.00 36.94 3.93
334 335 4.415512 TCTTGATTATTTGGGGTCCCTAGG 59.584 45.833 8.15 0.06 36.94 3.02
335 336 5.104109 TGTCTTGATTATTTGGGGTCCCTAG 60.104 44.000 8.15 0.00 36.94 3.02
343 344 4.402474 GGGGAGTTGTCTTGATTATTTGGG 59.598 45.833 0.00 0.00 0.00 4.12
350 351 2.716424 TGGAAGGGGAGTTGTCTTGATT 59.284 45.455 0.00 0.00 0.00 2.57
356 357 2.159085 CGTAGATGGAAGGGGAGTTGTC 60.159 54.545 0.00 0.00 0.00 3.18
357 358 1.831736 CGTAGATGGAAGGGGAGTTGT 59.168 52.381 0.00 0.00 0.00 3.32
376 377 1.598130 GGGAAAGGATCATCCCGCG 60.598 63.158 12.99 0.00 45.56 6.46
382 383 6.394345 AGAAGTGTTTAGGGAAAGGATCAT 57.606 37.500 0.00 0.00 0.00 2.45
386 387 9.511272 GTTTTATAGAAGTGTTTAGGGAAAGGA 57.489 33.333 0.00 0.00 0.00 3.36
391 392 9.103582 TGGTAGTTTTATAGAAGTGTTTAGGGA 57.896 33.333 0.00 0.00 0.00 4.20
403 404 5.047847 GCGCTGATGTGGTAGTTTTATAGA 58.952 41.667 0.00 0.00 0.00 1.98
453 456 6.913873 TTGCAGTTACCGTAAATATCTTCC 57.086 37.500 0.00 0.00 0.00 3.46
454 457 7.428472 GCTTTTGCAGTTACCGTAAATATCTTC 59.572 37.037 0.00 0.00 46.58 2.87
482 485 3.864789 AAGGAAGGTTGACACATGAGT 57.135 42.857 0.00 0.00 0.00 3.41
517 520 9.594936 AATCCCCATAAATATTGTTTTATCGGA 57.405 29.630 3.18 4.42 33.90 4.55
558 1850 3.686691 GCCCTATCTTGAGCTTCACCAAT 60.687 47.826 0.00 0.00 0.00 3.16
559 1851 2.356125 GCCCTATCTTGAGCTTCACCAA 60.356 50.000 0.00 0.00 0.00 3.67
640 1933 7.068593 CCTTAAATTCAACCAGCTGATCCAATA 59.931 37.037 17.39 0.00 0.00 1.90
652 1945 5.220521 AGGGAAAACCCTTAAATTCAACCA 58.779 37.500 1.53 0.00 41.63 3.67
672 2408 4.372656 CTCGAAGCTCCATTAGTTTAGGG 58.627 47.826 0.00 0.00 0.00 3.53
702 2438 3.875125 AGAAGAAAATAAGGAGCGACCC 58.125 45.455 0.00 0.00 40.05 4.46
843 3220 0.691413 GAAAGAGGGATCGGGGAGGT 60.691 60.000 0.00 0.00 0.00 3.85
870 3251 4.162690 CGCCCTGGCTCTACCACC 62.163 72.222 6.60 0.00 46.36 4.61
871 3252 4.840005 GCGCCCTGGCTCTACCAC 62.840 72.222 6.60 0.00 46.36 4.16
941 3322 1.550976 TCGCCTCTTTCTTCTTCCCTC 59.449 52.381 0.00 0.00 0.00 4.30
1023 3404 0.352364 TGGGGGAATGGGATTAGGGA 59.648 55.000 0.00 0.00 0.00 4.20
1103 3484 0.622136 TCCTACTCGAGGTACAGGCA 59.378 55.000 18.41 5.34 46.76 4.75
1144 3525 2.443416 ACCCTAATCCAAGAAAACGCC 58.557 47.619 0.00 0.00 0.00 5.68
1197 3578 4.201920 GGTTCAGACACAGTTCCAAGAAAC 60.202 45.833 0.00 0.00 0.00 2.78
1377 3774 3.376546 CAGATCTAAAACTGGCCAGAAGC 59.623 47.826 39.19 17.75 42.60 3.86
1400 3797 2.479275 CAGTCAGTCAGTCACATTGCAG 59.521 50.000 0.00 0.00 0.00 4.41
1419 3816 3.614176 ACGACGTTCATGTCATCATTCAG 59.386 43.478 0.00 0.00 38.84 3.02
1429 3826 0.531974 ACCTGCAACGACGTTCATGT 60.532 50.000 10.95 11.61 0.00 3.21
1439 3836 3.716006 CGCTGACCACCTGCAACG 61.716 66.667 0.00 0.00 39.38 4.10
1531 3932 1.485066 ACAACCCTAAGTAGCGGATGG 59.515 52.381 7.52 0.00 0.00 3.51
1535 3936 1.084289 GCAACAACCCTAAGTAGCGG 58.916 55.000 0.00 0.00 0.00 5.52
1571 3972 4.903054 TGCAGAGAGACACAAGAATGAAT 58.097 39.130 0.00 0.00 0.00 2.57
1585 3986 1.630244 CCGACGCCTTTTGCAGAGAG 61.630 60.000 1.09 0.00 41.33 3.20
1681 4082 4.421479 ACCCAGAAGTCGAGCGCG 62.421 66.667 2.41 2.41 39.35 6.86
1795 4196 2.664851 CAAGCACGAACCTCGCCA 60.665 61.111 0.00 0.00 45.12 5.69
1859 4260 1.678101 GACTGCAAGGAAGCACTTTGT 59.322 47.619 7.37 0.00 40.11 2.83
1861 4262 2.158696 AGAGACTGCAAGGAAGCACTTT 60.159 45.455 0.00 0.00 40.11 2.66
1867 4268 0.246086 AGCGAGAGACTGCAAGGAAG 59.754 55.000 0.00 0.00 39.30 3.46
1958 4359 3.503363 TGCACTCTGTTAAAGCCTGAATG 59.497 43.478 0.00 0.00 0.00 2.67
1962 4363 2.415090 GCATGCACTCTGTTAAAGCCTG 60.415 50.000 14.21 0.00 0.00 4.85
1966 4367 3.076621 TCCTGCATGCACTCTGTTAAAG 58.923 45.455 18.46 2.50 0.00 1.85
1972 4373 1.085091 GAACTCCTGCATGCACTCTG 58.915 55.000 18.46 7.02 0.00 3.35
1973 4374 0.689055 TGAACTCCTGCATGCACTCT 59.311 50.000 18.46 0.00 0.00 3.24
1985 4386 7.644157 GCCGAATCACTAAATTTATTGAACTCC 59.356 37.037 18.68 9.56 0.00 3.85
2008 4410 4.173256 TGTACGCAATCAGATATATGCCG 58.827 43.478 0.00 0.00 35.41 5.69
2016 4418 4.806247 GTCTTAGCTTGTACGCAATCAGAT 59.194 41.667 0.00 0.00 33.65 2.90
2017 4419 4.082190 AGTCTTAGCTTGTACGCAATCAGA 60.082 41.667 0.00 0.00 33.65 3.27
2018 4420 4.177026 AGTCTTAGCTTGTACGCAATCAG 58.823 43.478 0.00 0.00 33.65 2.90
2019 4421 4.188247 AGTCTTAGCTTGTACGCAATCA 57.812 40.909 0.00 0.00 33.65 2.57
2020 4422 4.865365 AGAAGTCTTAGCTTGTACGCAATC 59.135 41.667 0.00 0.00 33.65 2.67
2021 4423 4.822026 AGAAGTCTTAGCTTGTACGCAAT 58.178 39.130 0.00 0.00 33.65 3.56
2022 4424 4.252971 AGAAGTCTTAGCTTGTACGCAA 57.747 40.909 0.00 0.00 0.00 4.85
2023 4425 3.936372 AGAAGTCTTAGCTTGTACGCA 57.064 42.857 0.00 0.00 0.00 5.24
2024 4426 6.034591 TCAATAGAAGTCTTAGCTTGTACGC 58.965 40.000 0.00 0.00 29.01 4.42
2025 4427 7.473366 TCTCAATAGAAGTCTTAGCTTGTACG 58.527 38.462 0.00 0.00 29.01 3.67
2026 4428 9.810545 ATTCTCAATAGAAGTCTTAGCTTGTAC 57.189 33.333 0.00 0.00 44.79 2.90
2098 4500 4.623171 CGCCTAGGACTAACAGATTGGTTT 60.623 45.833 14.75 0.00 28.01 3.27
2107 4509 3.054875 TCTGTCTACGCCTAGGACTAACA 60.055 47.826 14.75 8.47 0.00 2.41
2121 4523 4.744795 ACCATGATGTCCTTCTGTCTAC 57.255 45.455 0.00 0.00 0.00 2.59
2122 4524 5.762179 AAACCATGATGTCCTTCTGTCTA 57.238 39.130 0.00 0.00 0.00 2.59
2126 4528 6.878923 TGTTAGTAAACCATGATGTCCTTCTG 59.121 38.462 0.00 0.00 34.49 3.02
2156 4561 5.892160 AACACGTTAGCAGATACAGTAGA 57.108 39.130 0.00 0.00 0.00 2.59
2163 4568 6.035650 GCAATACTGAAACACGTTAGCAGATA 59.964 38.462 15.48 7.82 32.72 1.98
2168 4573 4.663636 AGCAATACTGAAACACGTTAGC 57.336 40.909 0.00 0.00 0.00 3.09
2171 4576 5.040635 CCAAAAGCAATACTGAAACACGTT 58.959 37.500 0.00 0.00 0.00 3.99
2174 4579 6.902224 AAACCAAAAGCAATACTGAAACAC 57.098 33.333 0.00 0.00 0.00 3.32
2184 4589 8.957466 GGAGTAGATAACTAAACCAAAAGCAAT 58.043 33.333 0.00 0.00 39.07 3.56
2185 4590 7.392393 GGGAGTAGATAACTAAACCAAAAGCAA 59.608 37.037 0.00 0.00 39.07 3.91
2187 4592 7.110810 AGGGAGTAGATAACTAAACCAAAAGC 58.889 38.462 0.00 0.00 39.07 3.51
2200 4605 1.854939 TGGGACGGAGGGAGTAGATAA 59.145 52.381 0.00 0.00 0.00 1.75
2204 4609 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
2206 4611 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
2207 4612 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2208 4613 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2209 4614 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2210 4615 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
2211 4616 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
2212 4617 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
2257 4662 4.767928 TGTCCCATAATGTAAGGCGTTTTT 59.232 37.500 0.00 0.00 0.00 1.94
2258 4663 4.337145 TGTCCCATAATGTAAGGCGTTTT 58.663 39.130 0.00 0.00 0.00 2.43
2259 4664 3.945285 CTGTCCCATAATGTAAGGCGTTT 59.055 43.478 0.00 0.00 0.00 3.60
2260 4665 3.054655 ACTGTCCCATAATGTAAGGCGTT 60.055 43.478 0.00 0.00 0.00 4.84
2261 4666 2.504175 ACTGTCCCATAATGTAAGGCGT 59.496 45.455 0.00 0.00 0.00 5.68
2262 4667 2.872245 CACTGTCCCATAATGTAAGGCG 59.128 50.000 0.00 0.00 0.00 5.52
2263 4668 3.214328 CCACTGTCCCATAATGTAAGGC 58.786 50.000 0.00 0.00 0.00 4.35
2264 4669 3.458118 TCCCACTGTCCCATAATGTAAGG 59.542 47.826 0.00 0.00 0.00 2.69
2265 4670 4.164221 ACTCCCACTGTCCCATAATGTAAG 59.836 45.833 0.00 0.00 0.00 2.34
2266 4671 4.108570 ACTCCCACTGTCCCATAATGTAA 58.891 43.478 0.00 0.00 0.00 2.41
2267 4672 3.731431 ACTCCCACTGTCCCATAATGTA 58.269 45.455 0.00 0.00 0.00 2.29
2268 4673 2.562296 ACTCCCACTGTCCCATAATGT 58.438 47.619 0.00 0.00 0.00 2.71
2269 4674 4.982241 ATACTCCCACTGTCCCATAATG 57.018 45.455 0.00 0.00 0.00 1.90
2270 4675 7.253421 TGTATATACTCCCACTGTCCCATAAT 58.747 38.462 13.89 0.00 0.00 1.28
2271 4676 6.626238 TGTATATACTCCCACTGTCCCATAA 58.374 40.000 13.89 0.00 0.00 1.90
2272 4677 6.222227 TGTATATACTCCCACTGTCCCATA 57.778 41.667 13.89 0.00 0.00 2.74
2273 4678 5.087923 TGTATATACTCCCACTGTCCCAT 57.912 43.478 13.89 0.00 0.00 4.00
2274 4679 4.546224 TGTATATACTCCCACTGTCCCA 57.454 45.455 13.89 0.00 0.00 4.37
2275 4680 5.186021 CAGATGTATATACTCCCACTGTCCC 59.814 48.000 13.89 0.00 0.00 4.46
2276 4681 5.336849 GCAGATGTATATACTCCCACTGTCC 60.337 48.000 13.89 2.57 0.00 4.02
2277 4682 5.336849 GGCAGATGTATATACTCCCACTGTC 60.337 48.000 13.89 12.12 0.00 3.51
2278 4683 4.528596 GGCAGATGTATATACTCCCACTGT 59.471 45.833 13.89 0.00 0.00 3.55
2279 4684 4.528206 TGGCAGATGTATATACTCCCACTG 59.472 45.833 13.89 14.28 0.00 3.66
2280 4685 4.752063 TGGCAGATGTATATACTCCCACT 58.248 43.478 13.89 3.93 0.00 4.00
2281 4686 5.483685 TTGGCAGATGTATATACTCCCAC 57.516 43.478 13.89 1.67 0.00 4.61
2282 4687 6.702449 AATTGGCAGATGTATATACTCCCA 57.298 37.500 13.89 9.55 0.00 4.37
2283 4688 8.486210 TGATAATTGGCAGATGTATATACTCCC 58.514 37.037 13.89 7.43 0.00 4.30
2284 4689 9.890629 TTGATAATTGGCAGATGTATATACTCC 57.109 33.333 13.89 5.84 0.00 3.85
2324 4729 7.327975 AGTCCGATGAAAATCAGTGTAACATA 58.672 34.615 0.00 0.00 41.43 2.29
2333 4738 4.686972 TGCTCTAGTCCGATGAAAATCAG 58.313 43.478 0.00 0.00 0.00 2.90
2345 4750 5.241064 TCGTTATAACCAGATGCTCTAGTCC 59.759 44.000 10.01 0.00 0.00 3.85
2346 4751 6.315091 TCGTTATAACCAGATGCTCTAGTC 57.685 41.667 10.01 0.00 0.00 2.59
2351 4756 4.278669 TCTCCTCGTTATAACCAGATGCTC 59.721 45.833 11.36 0.00 0.00 4.26
2354 4759 6.255887 GTGTTTCTCCTCGTTATAACCAGATG 59.744 42.308 11.36 4.49 0.00 2.90
2359 4764 5.697633 TGTTGTGTTTCTCCTCGTTATAACC 59.302 40.000 10.01 0.00 0.00 2.85
2363 4768 5.305585 ACATGTTGTGTTTCTCCTCGTTAT 58.694 37.500 0.00 0.00 38.01 1.89
2367 4772 5.862924 AATACATGTTGTGTTTCTCCTCG 57.137 39.130 2.30 0.00 42.29 4.63
2368 4773 8.492673 TGATAATACATGTTGTGTTTCTCCTC 57.507 34.615 2.30 0.00 42.29 3.71
2383 4788 8.243961 ACTGTTCTAGTGCTCTGATAATACAT 57.756 34.615 0.00 0.00 38.49 2.29
2398 4804 6.875972 ATGGATCTTAACCACTGTTCTAGT 57.124 37.500 0.00 0.00 40.36 2.57
2404 4810 5.036916 TCCCTAATGGATCTTAACCACTGT 58.963 41.667 0.00 0.00 38.61 3.55
2426 4832 7.028926 TCGAGGATGTCTAAGTTGACTTATC 57.971 40.000 4.22 1.03 37.75 1.75
2463 4871 7.278868 GCAGAAAGTACTAAGAAGCATGTATGT 59.721 37.037 0.00 0.00 0.00 2.29
2468 4876 6.593382 AGAAGCAGAAAGTACTAAGAAGCATG 59.407 38.462 0.00 0.00 0.00 4.06
2502 4910 9.643693 GCTCAAGAATAAATTGGAAAAGATGAA 57.356 29.630 0.00 0.00 0.00 2.57
2504 4912 9.084164 CAGCTCAAGAATAAATTGGAAAAGATG 57.916 33.333 0.00 0.00 0.00 2.90
2507 4915 8.302438 AGTCAGCTCAAGAATAAATTGGAAAAG 58.698 33.333 0.00 0.00 0.00 2.27
2508 4921 8.084073 CAGTCAGCTCAAGAATAAATTGGAAAA 58.916 33.333 0.00 0.00 0.00 2.29
2513 4926 6.149973 TCCACAGTCAGCTCAAGAATAAATTG 59.850 38.462 0.00 0.00 0.00 2.32
2514 4927 6.240894 TCCACAGTCAGCTCAAGAATAAATT 58.759 36.000 0.00 0.00 0.00 1.82
2515 4928 5.809001 TCCACAGTCAGCTCAAGAATAAAT 58.191 37.500 0.00 0.00 0.00 1.40
2521 4934 2.250924 TGATCCACAGTCAGCTCAAGA 58.749 47.619 0.00 0.00 0.00 3.02
2522 4935 2.756840 TGATCCACAGTCAGCTCAAG 57.243 50.000 0.00 0.00 0.00 3.02
2524 4937 3.369175 AGTATGATCCACAGTCAGCTCA 58.631 45.455 0.00 0.00 0.00 4.26
2526 4939 4.281657 TGTAGTATGATCCACAGTCAGCT 58.718 43.478 0.00 0.00 0.00 4.24
2527 4940 4.655762 TGTAGTATGATCCACAGTCAGC 57.344 45.455 0.00 0.00 0.00 4.26
2528 4941 8.026026 GTGATATGTAGTATGATCCACAGTCAG 58.974 40.741 0.00 0.00 0.00 3.51
2529 4942 7.505585 TGTGATATGTAGTATGATCCACAGTCA 59.494 37.037 0.00 0.00 0.00 3.41
2530 4943 7.886338 TGTGATATGTAGTATGATCCACAGTC 58.114 38.462 0.00 0.00 0.00 3.51
2531 4944 7.839680 TGTGATATGTAGTATGATCCACAGT 57.160 36.000 0.00 0.00 0.00 3.55
2552 4965 8.503196 TGTGAGCACAACTTACTTATTTATGTG 58.497 33.333 0.00 0.00 38.56 3.21
2569 4982 6.191657 AGATATAATCCCATTGTGAGCACA 57.808 37.500 0.00 0.00 39.98 4.57
2570 4983 6.939163 AGAAGATATAATCCCATTGTGAGCAC 59.061 38.462 0.00 0.00 0.00 4.40
2595 5159 8.494433 AGTAAAGGGATTGCTGATTTAGTATGA 58.506 33.333 0.00 0.00 32.22 2.15
2596 5160 8.682936 AGTAAAGGGATTGCTGATTTAGTATG 57.317 34.615 0.00 0.00 32.22 2.39
2638 5202 3.356290 AGGCAAACACATAAGATCCACC 58.644 45.455 0.00 0.00 0.00 4.61
2641 5205 9.672673 ACATATATAGGCAAACACATAAGATCC 57.327 33.333 0.00 0.00 0.00 3.36
2663 5238 8.748412 CATTGGGGAAAAGAACATAAAGACATA 58.252 33.333 0.00 0.00 0.00 2.29
2664 5239 7.614494 CATTGGGGAAAAGAACATAAAGACAT 58.386 34.615 0.00 0.00 0.00 3.06
2687 5262 4.122776 GCATTACAGTACAGCAGTAGCAT 58.877 43.478 0.00 0.00 45.49 3.79
2690 5265 4.327357 GTGTGCATTACAGTACAGCAGTAG 59.673 45.833 6.40 0.00 40.69 2.57
2698 5273 5.235516 ACTTAGTGGTGTGCATTACAGTAC 58.764 41.667 0.00 0.00 40.69 2.73
2699 5274 5.477607 ACTTAGTGGTGTGCATTACAGTA 57.522 39.130 0.00 0.00 40.69 2.74
2702 5277 3.743911 CGAACTTAGTGGTGTGCATTACA 59.256 43.478 0.00 0.00 36.82 2.41
2703 5278 3.124636 CCGAACTTAGTGGTGTGCATTAC 59.875 47.826 0.00 0.00 0.00 1.89
2706 5281 1.808411 CCGAACTTAGTGGTGTGCAT 58.192 50.000 0.00 0.00 0.00 3.96
2708 5283 0.602905 AGCCGAACTTAGTGGTGTGC 60.603 55.000 0.00 0.00 0.00 4.57
2713 5288 1.878953 ACAACAGCCGAACTTAGTGG 58.121 50.000 0.00 0.00 0.00 4.00
2775 5350 8.383175 ACAACCTTCCATTTTATCAAGAGAGTA 58.617 33.333 0.00 0.00 0.00 2.59
2777 5352 7.148171 GGACAACCTTCCATTTTATCAAGAGAG 60.148 40.741 0.00 0.00 35.49 3.20
2778 5353 6.659242 GGACAACCTTCCATTTTATCAAGAGA 59.341 38.462 0.00 0.00 35.49 3.10
2779 5354 6.660949 AGGACAACCTTCCATTTTATCAAGAG 59.339 38.462 0.00 0.00 45.36 2.85
2785 5360 8.116026 ACATCTTAGGACAACCTTCCATTTTAT 58.884 33.333 0.00 0.00 45.36 1.40
2786 5361 7.466804 ACATCTTAGGACAACCTTCCATTTTA 58.533 34.615 0.00 0.00 45.36 1.52
2797 5372 7.035840 TCGGTTATCTACATCTTAGGACAAC 57.964 40.000 0.00 0.00 0.00 3.32
2803 5378 5.704888 CAGGCTCGGTTATCTACATCTTAG 58.295 45.833 0.00 0.00 0.00 2.18
2819 5397 2.511373 TATTGGCACGCAGGCTCG 60.511 61.111 3.76 5.08 44.55 5.03
2827 5405 0.735978 TGCTGTCGAGTATTGGCACG 60.736 55.000 0.00 0.00 26.42 5.34
2835 5413 3.885724 TTCATGGAATGCTGTCGAGTA 57.114 42.857 0.00 0.00 46.21 2.59
2839 5417 2.485426 ACACTTTCATGGAATGCTGTCG 59.515 45.455 0.00 0.00 46.21 4.35
2840 5418 4.479619 GAACACTTTCATGGAATGCTGTC 58.520 43.478 0.00 0.00 46.21 3.51
2847 5425 3.888930 GACAAGGGAACACTTTCATGGAA 59.111 43.478 0.00 0.00 32.80 3.53
2850 5428 2.558359 GGGACAAGGGAACACTTTCATG 59.442 50.000 0.00 0.00 32.80 3.07
2863 5441 6.094048 CAGTAACATGTATCAAAGGGACAAGG 59.906 42.308 0.00 0.00 0.00 3.61
2866 5444 6.013725 AGACAGTAACATGTATCAAAGGGACA 60.014 38.462 0.00 0.00 32.25 4.02
2867 5445 6.407202 AGACAGTAACATGTATCAAAGGGAC 58.593 40.000 0.00 0.00 32.25 4.46
2929 5507 8.462143 TTCTCTATAGTTCAAACAAAGCTACG 57.538 34.615 0.00 0.00 0.00 3.51
2962 5540 2.649816 AGCCTGAAACATAAGAGGGGTT 59.350 45.455 0.00 0.00 0.00 4.11
2964 5542 2.648059 CAGCCTGAAACATAAGAGGGG 58.352 52.381 0.00 0.00 0.00 4.79
2968 5546 2.086869 GCAGCAGCCTGAAACATAAGA 58.913 47.619 0.00 0.00 41.77 2.10
2969 5547 1.814394 TGCAGCAGCCTGAAACATAAG 59.186 47.619 0.00 0.00 41.77 1.73
2970 5548 1.908344 TGCAGCAGCCTGAAACATAA 58.092 45.000 0.00 0.00 41.77 1.90
2971 5549 1.746787 CATGCAGCAGCCTGAAACATA 59.253 47.619 0.00 0.00 41.77 2.29
3121 5699 7.281549 CCATATGAGACATGTTGACAAGAATGA 59.718 37.037 14.73 0.00 0.00 2.57
3159 5737 4.695455 GGGCAATGCATAATACAGTACGAT 59.305 41.667 7.79 0.00 0.00 3.73
3161 5739 4.065088 AGGGCAATGCATAATACAGTACG 58.935 43.478 7.79 0.00 0.00 3.67
3172 5750 1.274167 CAGTTTGTGAGGGCAATGCAT 59.726 47.619 7.79 0.00 0.00 3.96
3199 5778 6.241207 TGTTGCTTACTTGCTTATCAGAAC 57.759 37.500 0.00 0.00 0.00 3.01
3256 5835 7.489113 GCAGAATTGGAATTACGACATTTCATT 59.511 33.333 0.00 0.00 30.84 2.57
3257 5836 6.974622 GCAGAATTGGAATTACGACATTTCAT 59.025 34.615 0.00 0.00 30.84 2.57
3258 5837 6.072230 TGCAGAATTGGAATTACGACATTTCA 60.072 34.615 0.00 0.00 30.84 2.69
3332 5916 5.171476 TGAACTGACTAACTAGCTCAATGC 58.829 41.667 0.00 0.00 43.29 3.56
3339 5923 5.066968 AGAAGCTGAACTGACTAACTAGC 57.933 43.478 0.00 0.00 0.00 3.42
3340 5924 5.866633 CCAAGAAGCTGAACTGACTAACTAG 59.133 44.000 0.00 0.00 0.00 2.57
3341 5925 5.279506 CCCAAGAAGCTGAACTGACTAACTA 60.280 44.000 0.00 0.00 0.00 2.24
3344 5928 3.391296 ACCCAAGAAGCTGAACTGACTAA 59.609 43.478 0.00 0.00 0.00 2.24
3346 5930 1.771255 ACCCAAGAAGCTGAACTGACT 59.229 47.619 0.00 0.00 0.00 3.41
3365 5949 8.770828 TGCAAAAGTAACTATCTGACTGTAAAC 58.229 33.333 0.00 0.00 0.00 2.01
3394 5978 1.443194 GGCATTCTGTTGCTGCACG 60.443 57.895 0.00 0.00 42.38 5.34
3425 6015 9.691362 GCTAAATGAAGGTTGAAAGAACAATAA 57.309 29.630 0.00 0.00 32.36 1.40
3426 6016 8.303876 GGCTAAATGAAGGTTGAAAGAACAATA 58.696 33.333 0.00 0.00 32.36 1.90
3427 6017 7.015584 AGGCTAAATGAAGGTTGAAAGAACAAT 59.984 33.333 0.00 0.00 32.36 2.71
3456 6046 1.000274 ACAAAAGCGAAGTGGAATGCC 60.000 47.619 0.00 0.00 0.00 4.40
3468 6058 4.769215 AGCTCGTAAAGTAAACAAAAGCG 58.231 39.130 0.00 0.00 0.00 4.68
3485 6075 4.871993 AATATCACAAAAGCAGAGCTCG 57.128 40.909 8.37 4.60 38.25 5.03
3560 6150 9.416794 GTGTGTCAGATTTGATAGGTATATCAG 57.583 37.037 0.00 0.00 46.50 2.90
3649 6239 1.199789 GATGTGATGGCGTTTTGAGCA 59.800 47.619 0.00 0.00 36.08 4.26
3782 6372 3.320541 AGCCAAAATCACATGAAAACGGA 59.679 39.130 0.00 0.00 0.00 4.69
3891 6481 6.879400 AGAAAGTATGCTCTTTAGTACAGGG 58.121 40.000 0.00 0.00 37.70 4.45
3913 6507 3.578716 CACCAGGGTACAAGAGAAGAAGA 59.421 47.826 0.00 0.00 0.00 2.87
3914 6508 3.325135 ACACCAGGGTACAAGAGAAGAAG 59.675 47.826 0.00 0.00 0.00 2.85
3915 6509 3.071023 CACACCAGGGTACAAGAGAAGAA 59.929 47.826 0.00 0.00 0.00 2.52
3916 6510 2.632996 CACACCAGGGTACAAGAGAAGA 59.367 50.000 0.00 0.00 0.00 2.87
4049 6643 2.567615 CAACTACACCTCCAAGGCTAGT 59.432 50.000 0.00 0.00 39.63 2.57
4050 6644 2.567615 ACAACTACACCTCCAAGGCTAG 59.432 50.000 0.00 0.00 39.63 3.42
4051 6645 2.616524 ACAACTACACCTCCAAGGCTA 58.383 47.619 0.00 0.00 39.63 3.93
4052 6646 1.435256 ACAACTACACCTCCAAGGCT 58.565 50.000 0.00 0.00 39.63 4.58
4063 6671 3.864243 AGGTTCAACGACAACAACTACA 58.136 40.909 0.00 0.00 0.00 2.74
4100 6709 5.119931 TGTGTACAAGATGGTGAATTTGC 57.880 39.130 0.00 0.00 0.00 3.68
4127 6737 2.027837 GGCGACAAGGTTAGGGTTTCTA 60.028 50.000 0.00 0.00 0.00 2.10
4151 6761 7.225538 CGGAATGTATTAGACAAAGCTCTCATT 59.774 37.037 0.00 0.00 42.78 2.57
4176 6786 0.582482 CCGAGATCCACTCTACGTCG 59.418 60.000 0.00 0.00 42.92 5.12
4183 6793 2.431057 TCTTTAAGGCCGAGATCCACTC 59.569 50.000 0.00 0.00 41.79 3.51
4184 6794 2.168728 GTCTTTAAGGCCGAGATCCACT 59.831 50.000 0.00 0.00 0.00 4.00
4185 6795 2.552031 GTCTTTAAGGCCGAGATCCAC 58.448 52.381 0.00 0.00 0.00 4.02
4186 6796 1.485066 GGTCTTTAAGGCCGAGATCCA 59.515 52.381 0.00 0.00 25.77 3.41
4187 6797 2.242047 GGTCTTTAAGGCCGAGATCC 57.758 55.000 0.00 1.48 25.77 3.36
4194 6804 2.494870 TGTAGAGTCGGTCTTTAAGGCC 59.505 50.000 5.37 5.37 36.39 5.19
4195 6805 3.863142 TGTAGAGTCGGTCTTTAAGGC 57.137 47.619 0.00 0.00 36.64 4.35
4196 6806 6.037098 CAGAATGTAGAGTCGGTCTTTAAGG 58.963 44.000 0.00 0.00 36.64 2.69
4197 6807 6.748198 GTCAGAATGTAGAGTCGGTCTTTAAG 59.252 42.308 0.00 0.00 37.40 1.85
4198 6808 6.618811 GTCAGAATGTAGAGTCGGTCTTTAA 58.381 40.000 0.00 0.00 37.40 1.52
4199 6809 5.163784 CGTCAGAATGTAGAGTCGGTCTTTA 60.164 44.000 0.00 0.00 37.40 1.85
4200 6810 4.379603 CGTCAGAATGTAGAGTCGGTCTTT 60.380 45.833 0.00 0.00 37.40 2.52
4201 6811 3.127203 CGTCAGAATGTAGAGTCGGTCTT 59.873 47.826 0.00 0.00 37.40 3.01
4202 6812 2.678836 CGTCAGAATGTAGAGTCGGTCT 59.321 50.000 0.00 0.00 37.40 3.85
4203 6813 2.419324 ACGTCAGAATGTAGAGTCGGTC 59.581 50.000 0.00 0.00 37.40 4.79
4204 6814 2.434428 ACGTCAGAATGTAGAGTCGGT 58.566 47.619 0.00 0.00 37.40 4.69
4205 6815 4.611310 TTACGTCAGAATGTAGAGTCGG 57.389 45.455 0.00 0.00 37.40 4.79
4206 6816 5.866075 TCTTTACGTCAGAATGTAGAGTCG 58.134 41.667 0.00 0.00 37.40 4.18
4207 6817 7.221067 CCAATCTTTACGTCAGAATGTAGAGTC 59.779 40.741 10.38 0.00 37.40 3.36
4208 6818 7.036220 CCAATCTTTACGTCAGAATGTAGAGT 58.964 38.462 10.38 0.00 37.40 3.24
4209 6819 7.258441 TCCAATCTTTACGTCAGAATGTAGAG 58.742 38.462 10.38 0.00 37.40 2.43
4210 6820 7.165460 TCCAATCTTTACGTCAGAATGTAGA 57.835 36.000 10.38 1.83 37.40 2.59
4211 6821 7.096436 CGATCCAATCTTTACGTCAGAATGTAG 60.096 40.741 10.38 0.00 37.40 2.74
4212 6822 6.695713 CGATCCAATCTTTACGTCAGAATGTA 59.304 38.462 10.38 0.00 37.40 2.29
4213 6823 5.520288 CGATCCAATCTTTACGTCAGAATGT 59.480 40.000 10.38 0.00 37.40 2.71
4214 6824 5.557136 GCGATCCAATCTTTACGTCAGAATG 60.557 44.000 0.00 0.00 37.54 2.67
4215 6825 4.508124 GCGATCCAATCTTTACGTCAGAAT 59.492 41.667 0.00 0.00 0.00 2.40
4216 6826 3.863424 GCGATCCAATCTTTACGTCAGAA 59.137 43.478 0.00 0.00 0.00 3.02
4217 6827 3.119280 TGCGATCCAATCTTTACGTCAGA 60.119 43.478 0.00 0.00 0.00 3.27
4218 6828 3.186909 TGCGATCCAATCTTTACGTCAG 58.813 45.455 0.00 0.00 0.00 3.51
4219 6829 3.186909 CTGCGATCCAATCTTTACGTCA 58.813 45.455 0.00 0.00 0.00 4.35
4220 6830 2.033662 GCTGCGATCCAATCTTTACGTC 60.034 50.000 0.00 0.00 0.00 4.34
4221 6831 1.933853 GCTGCGATCCAATCTTTACGT 59.066 47.619 0.00 0.00 0.00 3.57
4222 6832 1.261619 GGCTGCGATCCAATCTTTACG 59.738 52.381 0.00 0.00 0.00 3.18
4223 6833 2.565841 AGGCTGCGATCCAATCTTTAC 58.434 47.619 0.00 0.00 0.00 2.01
4224 6834 3.281727 AAGGCTGCGATCCAATCTTTA 57.718 42.857 0.00 0.00 0.00 1.85
4225 6835 2.134789 AAGGCTGCGATCCAATCTTT 57.865 45.000 0.00 0.00 0.00 2.52
4226 6836 3.281727 TTAAGGCTGCGATCCAATCTT 57.718 42.857 0.00 0.00 0.00 2.40
4286 6896 6.330250 AGGGTTTTAGTCATATCAGGTGCTAT 59.670 38.462 0.00 0.00 0.00 2.97
4297 6907 9.719433 AGTACATAGGTTAGGGTTTTAGTCATA 57.281 33.333 0.00 0.00 0.00 2.15
4327 7329 0.108186 CCATTGTGCCTCAGCTACGA 60.108 55.000 0.00 0.00 40.80 3.43
4346 7348 1.475213 GCTGATGGCAGGTAGGGTAAC 60.475 57.143 0.00 0.00 42.53 2.50
4354 7357 2.410322 TTTGACGGCTGATGGCAGGT 62.410 55.000 0.00 0.00 42.53 4.00
4371 7374 0.895100 TTTCTCTGCATGCCGGCTTT 60.895 50.000 29.70 12.78 34.04 3.51
4376 7379 1.138247 GCCTTTTCTCTGCATGCCG 59.862 57.895 16.68 9.39 0.00 5.69
4378 7381 0.523072 TTCGCCTTTTCTCTGCATGC 59.477 50.000 11.82 11.82 0.00 4.06
4379 7382 3.498927 AATTCGCCTTTTCTCTGCATG 57.501 42.857 0.00 0.00 0.00 4.06
4380 7383 3.256631 ACAAATTCGCCTTTTCTCTGCAT 59.743 39.130 0.00 0.00 0.00 3.96
4381 7384 2.622942 ACAAATTCGCCTTTTCTCTGCA 59.377 40.909 0.00 0.00 0.00 4.41
4389 7392 0.603065 GAGCCCACAAATTCGCCTTT 59.397 50.000 0.00 0.00 0.00 3.11
4400 7491 4.196778 TTTGCCGGTGAGCCCACA 62.197 61.111 1.90 0.00 44.93 4.17
4402 7493 2.424842 AATCTTTGCCGGTGAGCCCA 62.425 55.000 1.90 0.00 0.00 5.36
4509 7601 3.411446 CACTGCTGTTCTGGATTGGTTA 58.589 45.455 0.00 0.00 0.00 2.85
4510 7602 2.233271 CACTGCTGTTCTGGATTGGTT 58.767 47.619 0.00 0.00 0.00 3.67
4511 7603 1.546323 CCACTGCTGTTCTGGATTGGT 60.546 52.381 0.00 0.00 0.00 3.67
4540 7733 6.559521 GCGTATTGTTTGTTGTCACATTCAAC 60.560 38.462 0.00 0.00 43.48 3.18
4568 7761 8.880878 TTTTGGGCTTAAGTTATCACTTTTTC 57.119 30.769 4.02 0.00 40.66 2.29
4597 7791 8.918202 TTTCCTTGATGTTTTACTGTATCACT 57.082 30.769 0.00 0.00 29.96 3.41
4598 7792 9.612620 CTTTTCCTTGATGTTTTACTGTATCAC 57.387 33.333 0.00 0.00 29.96 3.06
4599 7793 9.567776 TCTTTTCCTTGATGTTTTACTGTATCA 57.432 29.630 0.00 0.00 0.00 2.15
4624 7822 4.747108 CGATCCACTATCACTCATGGTTTC 59.253 45.833 0.00 0.00 33.87 2.78
4625 7823 4.405680 TCGATCCACTATCACTCATGGTTT 59.594 41.667 0.00 0.00 33.87 3.27
4639 7837 4.508662 GTCCTTTGAATCTTCGATCCACT 58.491 43.478 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.