Multiple sequence alignment - TraesCS1B01G125800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G125800 chr1B 100.000 2845 0 0 1 2845 152836460 152839304 0.000000e+00 5254
1 TraesCS1B01G125800 chr1A 90.188 1916 137 24 181 2084 95527383 95529259 0.000000e+00 2449
2 TraesCS1B01G125800 chr1A 90.222 1800 125 24 297 2084 95049981 95048221 0.000000e+00 2302
3 TraesCS1B01G125800 chr1A 88.192 271 22 3 1876 2142 95531720 95531984 5.920000e-82 315
4 TraesCS1B01G125800 chr1D 91.553 1681 76 23 389 2050 99547333 99545700 0.000000e+00 2257


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G125800 chr1B 152836460 152839304 2844 False 5254 5254 100.000 1 2845 1 chr1B.!!$F1 2844
1 TraesCS1B01G125800 chr1A 95048221 95049981 1760 True 2302 2302 90.222 297 2084 1 chr1A.!!$R1 1787
2 TraesCS1B01G125800 chr1A 95527383 95531984 4601 False 1382 2449 89.190 181 2142 2 chr1A.!!$F1 1961
3 TraesCS1B01G125800 chr1D 99545700 99547333 1633 True 2257 2257 91.553 389 2050 1 chr1D.!!$R1 1661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.106369 TCGCTTCTCGGGGAATAGGA 60.106 55.0 0.0 0.0 39.05 2.94 F
450 452 0.179124 GCCGAGCTACCAGTCAAGAG 60.179 60.0 0.0 0.0 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1033 1038 0.394899 CTTGGCCTCCATTCTCCCAC 60.395 60.0 3.32 0.0 31.53 4.61 R
2414 3178 0.039035 AGAGAGAGAGAGTTGGGCGT 59.961 55.0 0.00 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 2.047274 CTGGTACGGCCCAGTGTG 60.047 66.667 13.00 0.00 45.81 3.82
51 52 3.605749 CTGGTACGGCCCAGTGTGG 62.606 68.421 13.00 0.00 45.81 4.17
61 62 3.782244 CAGTGTGGCGCTCGCTTC 61.782 66.667 7.64 8.00 41.60 3.86
62 63 3.996124 AGTGTGGCGCTCGCTTCT 61.996 61.111 7.64 4.87 41.60 2.85
63 64 3.482783 GTGTGGCGCTCGCTTCTC 61.483 66.667 7.64 5.20 41.60 2.87
69 70 4.129737 CGCTCGCTTCTCGGGGAA 62.130 66.667 0.00 0.00 39.59 3.97
70 71 2.501610 GCTCGCTTCTCGGGGAAT 59.498 61.111 0.00 0.00 39.59 3.01
71 72 1.740285 GCTCGCTTCTCGGGGAATA 59.260 57.895 0.00 0.00 39.59 1.75
72 73 0.319125 GCTCGCTTCTCGGGGAATAG 60.319 60.000 0.00 0.00 39.59 1.73
73 74 0.315568 CTCGCTTCTCGGGGAATAGG 59.684 60.000 0.00 0.00 39.05 2.57
74 75 0.106369 TCGCTTCTCGGGGAATAGGA 60.106 55.000 0.00 0.00 39.05 2.94
75 76 0.315568 CGCTTCTCGGGGAATAGGAG 59.684 60.000 0.00 0.00 33.01 3.69
76 77 0.682292 GCTTCTCGGGGAATAGGAGG 59.318 60.000 0.00 0.00 33.01 4.30
77 78 2.035331 GCTTCTCGGGGAATAGGAGGT 61.035 57.143 0.00 0.00 33.01 3.85
78 79 1.964933 CTTCTCGGGGAATAGGAGGTC 59.035 57.143 0.00 0.00 33.01 3.85
79 80 0.187851 TCTCGGGGAATAGGAGGTCC 59.812 60.000 0.00 0.00 0.00 4.46
85 86 1.049402 GGAATAGGAGGTCCCTTCGG 58.951 60.000 0.00 0.00 44.85 4.30
86 87 0.393448 GAATAGGAGGTCCCTTCGGC 59.607 60.000 0.00 0.00 44.85 5.54
87 88 1.054978 AATAGGAGGTCCCTTCGGCC 61.055 60.000 0.00 0.00 44.85 6.13
88 89 1.962570 ATAGGAGGTCCCTTCGGCCT 61.963 60.000 0.00 0.00 44.85 5.19
89 90 2.873557 TAGGAGGTCCCTTCGGCCTG 62.874 65.000 0.00 0.00 44.85 4.85
90 91 3.003763 GAGGTCCCTTCGGCCTGT 61.004 66.667 0.00 0.00 36.24 4.00
91 92 1.684734 GAGGTCCCTTCGGCCTGTA 60.685 63.158 0.00 0.00 36.24 2.74
92 93 1.677637 GAGGTCCCTTCGGCCTGTAG 61.678 65.000 0.00 0.00 36.24 2.74
93 94 1.988406 GGTCCCTTCGGCCTGTAGT 60.988 63.158 0.00 0.00 0.00 2.73
94 95 1.218316 GTCCCTTCGGCCTGTAGTG 59.782 63.158 0.00 0.00 0.00 2.74
95 96 2.125106 CCCTTCGGCCTGTAGTGC 60.125 66.667 0.00 0.00 0.00 4.40
96 97 2.660064 CCCTTCGGCCTGTAGTGCT 61.660 63.158 0.00 0.00 0.00 4.40
97 98 1.296715 CCTTCGGCCTGTAGTGCTT 59.703 57.895 0.00 0.00 0.00 3.91
98 99 1.021390 CCTTCGGCCTGTAGTGCTTG 61.021 60.000 0.00 0.00 0.00 4.01
99 100 0.320771 CTTCGGCCTGTAGTGCTTGT 60.321 55.000 0.00 0.00 0.00 3.16
100 101 0.320421 TTCGGCCTGTAGTGCTTGTC 60.320 55.000 0.00 0.00 0.00 3.18
101 102 1.185618 TCGGCCTGTAGTGCTTGTCT 61.186 55.000 0.00 0.00 0.00 3.41
102 103 0.320771 CGGCCTGTAGTGCTTGTCTT 60.321 55.000 0.00 0.00 0.00 3.01
103 104 1.443802 GGCCTGTAGTGCTTGTCTTC 58.556 55.000 0.00 0.00 0.00 2.87
104 105 1.071605 GCCTGTAGTGCTTGTCTTCG 58.928 55.000 0.00 0.00 0.00 3.79
105 106 1.605712 GCCTGTAGTGCTTGTCTTCGT 60.606 52.381 0.00 0.00 0.00 3.85
106 107 2.329379 CCTGTAGTGCTTGTCTTCGTC 58.671 52.381 0.00 0.00 0.00 4.20
107 108 2.329379 CTGTAGTGCTTGTCTTCGTCC 58.671 52.381 0.00 0.00 0.00 4.79
108 109 1.961394 TGTAGTGCTTGTCTTCGTCCT 59.039 47.619 0.00 0.00 0.00 3.85
109 110 2.364324 TGTAGTGCTTGTCTTCGTCCTT 59.636 45.455 0.00 0.00 0.00 3.36
110 111 2.622064 AGTGCTTGTCTTCGTCCTTT 57.378 45.000 0.00 0.00 0.00 3.11
111 112 2.919228 AGTGCTTGTCTTCGTCCTTTT 58.081 42.857 0.00 0.00 0.00 2.27
112 113 4.067972 AGTGCTTGTCTTCGTCCTTTTA 57.932 40.909 0.00 0.00 0.00 1.52
113 114 4.642429 AGTGCTTGTCTTCGTCCTTTTAT 58.358 39.130 0.00 0.00 0.00 1.40
114 115 4.691216 AGTGCTTGTCTTCGTCCTTTTATC 59.309 41.667 0.00 0.00 0.00 1.75
115 116 4.691216 GTGCTTGTCTTCGTCCTTTTATCT 59.309 41.667 0.00 0.00 0.00 1.98
116 117 4.929808 TGCTTGTCTTCGTCCTTTTATCTC 59.070 41.667 0.00 0.00 0.00 2.75
117 118 4.929808 GCTTGTCTTCGTCCTTTTATCTCA 59.070 41.667 0.00 0.00 0.00 3.27
118 119 5.408604 GCTTGTCTTCGTCCTTTTATCTCAA 59.591 40.000 0.00 0.00 0.00 3.02
119 120 6.092807 GCTTGTCTTCGTCCTTTTATCTCAAT 59.907 38.462 0.00 0.00 0.00 2.57
120 121 7.361286 GCTTGTCTTCGTCCTTTTATCTCAATT 60.361 37.037 0.00 0.00 0.00 2.32
121 122 7.979444 TGTCTTCGTCCTTTTATCTCAATTT 57.021 32.000 0.00 0.00 0.00 1.82
122 123 8.029642 TGTCTTCGTCCTTTTATCTCAATTTC 57.970 34.615 0.00 0.00 0.00 2.17
123 124 7.878127 TGTCTTCGTCCTTTTATCTCAATTTCT 59.122 33.333 0.00 0.00 0.00 2.52
124 125 8.384365 GTCTTCGTCCTTTTATCTCAATTTCTC 58.616 37.037 0.00 0.00 0.00 2.87
125 126 8.314751 TCTTCGTCCTTTTATCTCAATTTCTCT 58.685 33.333 0.00 0.00 0.00 3.10
126 127 8.848474 TTCGTCCTTTTATCTCAATTTCTCTT 57.152 30.769 0.00 0.00 0.00 2.85
127 128 8.848474 TCGTCCTTTTATCTCAATTTCTCTTT 57.152 30.769 0.00 0.00 0.00 2.52
128 129 9.938280 TCGTCCTTTTATCTCAATTTCTCTTTA 57.062 29.630 0.00 0.00 0.00 1.85
162 163 7.459795 AAAAATCTCAATTCCTCTGAGTTCC 57.540 36.000 3.66 0.00 41.00 3.62
163 164 5.768980 AATCTCAATTCCTCTGAGTTCCA 57.231 39.130 3.66 0.00 41.00 3.53
164 165 4.815533 TCTCAATTCCTCTGAGTTCCAG 57.184 45.455 3.66 0.00 41.00 3.86
165 166 3.055530 TCTCAATTCCTCTGAGTTCCAGC 60.056 47.826 3.66 0.00 42.62 4.85
166 167 2.909006 TCAATTCCTCTGAGTTCCAGCT 59.091 45.455 3.66 0.00 42.62 4.24
167 168 3.008330 CAATTCCTCTGAGTTCCAGCTG 58.992 50.000 6.78 6.78 42.62 4.24
168 169 1.722034 TTCCTCTGAGTTCCAGCTGT 58.278 50.000 13.81 0.00 42.62 4.40
169 170 0.972134 TCCTCTGAGTTCCAGCTGTG 59.028 55.000 13.81 4.33 42.62 3.66
170 171 0.683973 CCTCTGAGTTCCAGCTGTGT 59.316 55.000 13.81 0.00 42.62 3.72
171 172 1.895798 CCTCTGAGTTCCAGCTGTGTA 59.104 52.381 13.81 0.00 42.62 2.90
172 173 2.300152 CCTCTGAGTTCCAGCTGTGTAA 59.700 50.000 13.81 0.91 42.62 2.41
173 174 3.055530 CCTCTGAGTTCCAGCTGTGTAAT 60.056 47.826 13.81 0.00 42.62 1.89
174 175 4.564406 CCTCTGAGTTCCAGCTGTGTAATT 60.564 45.833 13.81 0.70 42.62 1.40
175 176 4.569943 TCTGAGTTCCAGCTGTGTAATTC 58.430 43.478 13.81 10.42 42.62 2.17
176 177 3.325870 TGAGTTCCAGCTGTGTAATTCG 58.674 45.455 13.81 0.00 0.00 3.34
177 178 3.006430 TGAGTTCCAGCTGTGTAATTCGA 59.994 43.478 13.81 0.00 0.00 3.71
178 179 3.589988 AGTTCCAGCTGTGTAATTCGAG 58.410 45.455 13.81 0.00 0.00 4.04
179 180 2.010145 TCCAGCTGTGTAATTCGAGC 57.990 50.000 13.81 0.00 0.00 5.03
184 185 3.549471 CAGCTGTGTAATTCGAGCTACTG 59.451 47.826 5.25 0.00 39.82 2.74
206 207 3.983663 GTGATCTTAACACTGGCCGTAGG 60.984 52.174 0.00 0.00 42.23 3.18
207 208 6.418880 GTGATCTTAACACTGGCCGTAGGT 62.419 50.000 0.00 0.00 41.74 3.08
231 232 0.510359 GCACACTTGCTTCTGTCTCG 59.490 55.000 0.00 0.00 46.17 4.04
237 238 1.221466 TTGCTTCTGTCTCGGTTGCG 61.221 55.000 0.00 0.00 0.00 4.85
238 239 2.383527 GCTTCTGTCTCGGTTGCGG 61.384 63.158 0.00 0.00 0.00 5.69
292 293 1.738099 AGGTCGAGAACGCATGCAC 60.738 57.895 19.57 5.99 39.58 4.57
307 308 2.395360 GCACGCCTAATGTTCGGCA 61.395 57.895 8.72 0.00 46.62 5.69
348 349 1.927174 GTGTCCGATGATTCACGAAGG 59.073 52.381 9.29 2.42 0.00 3.46
351 352 3.114065 GTCCGATGATTCACGAAGGTAC 58.886 50.000 9.29 0.00 0.00 3.34
355 356 3.735208 CGATGATTCACGAAGGTACTGCT 60.735 47.826 0.00 0.00 40.86 4.24
430 432 0.250467 GCCAAGCCAGTTCAGTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
448 450 0.459237 CAGCCGAGCTACCAGTCAAG 60.459 60.000 0.00 0.00 36.40 3.02
449 451 0.612174 AGCCGAGCTACCAGTCAAGA 60.612 55.000 0.00 0.00 36.99 3.02
450 452 0.179124 GCCGAGCTACCAGTCAAGAG 60.179 60.000 0.00 0.00 0.00 2.85
451 453 1.178276 CCGAGCTACCAGTCAAGAGT 58.822 55.000 0.00 0.00 0.00 3.24
452 454 1.133407 CCGAGCTACCAGTCAAGAGTC 59.867 57.143 0.00 0.00 0.00 3.36
453 455 1.813178 CGAGCTACCAGTCAAGAGTCA 59.187 52.381 0.00 0.00 0.00 3.41
454 456 2.229062 CGAGCTACCAGTCAAGAGTCAA 59.771 50.000 0.00 0.00 0.00 3.18
484 486 2.109387 CCGGGTGGACGACAAACA 59.891 61.111 0.00 0.00 37.49 2.83
611 616 1.046472 TGACCCCGCGTCTTCCATAT 61.046 55.000 4.92 0.00 42.49 1.78
613 618 0.677842 ACCCCGCGTCTTCCATATAC 59.322 55.000 4.92 0.00 0.00 1.47
614 619 0.388134 CCCCGCGTCTTCCATATACG 60.388 60.000 4.92 0.00 39.55 3.06
680 685 1.973281 CTGCATGGCGTGAACCCTT 60.973 57.895 11.71 0.00 0.00 3.95
730 735 0.523966 CCGTCGCTTTCACTCTCTCT 59.476 55.000 0.00 0.00 0.00 3.10
731 736 1.466697 CCGTCGCTTTCACTCTCTCTC 60.467 57.143 0.00 0.00 0.00 3.20
755 760 2.115427 TGTCAGGTCAGGTGTGAAAGA 58.885 47.619 0.00 0.00 33.27 2.52
859 864 1.608283 CGTCAACTCCCAAGTCTTCCC 60.608 57.143 0.00 0.00 33.48 3.97
890 895 0.331278 TTGGTTCGATGGGCAATCCT 59.669 50.000 0.00 0.00 36.20 3.24
923 928 2.427320 CGGGATCGGGTCATGCAT 59.573 61.111 0.00 0.00 0.00 3.96
939 944 1.699083 TGCATGTTCAGTCTTCCTCCA 59.301 47.619 0.00 0.00 0.00 3.86
978 983 3.624861 GCCACCTGTGCATGCTATATATC 59.375 47.826 20.33 0.00 0.00 1.63
1149 1154 4.148825 CCGCCTGGTTCCTCTCCG 62.149 72.222 0.00 0.00 0.00 4.63
1154 1159 2.920912 TGGTTCCTCTCCGCCGTT 60.921 61.111 0.00 0.00 0.00 4.44
1158 1163 2.204461 TTCCTCTCCGCCGTTGACA 61.204 57.895 0.00 0.00 0.00 3.58
1249 1254 1.693062 CATCCTCCTGGTCATCCTCAG 59.307 57.143 0.00 0.00 34.23 3.35
1363 1377 4.162690 GCCCAAGAGTCGGCGGAT 62.163 66.667 7.21 0.00 34.94 4.18
1368 1382 0.803768 CAAGAGTCGGCGGATCAGTG 60.804 60.000 7.21 4.52 0.00 3.66
1427 1441 3.554692 CGTGAACATCGAGGCGCC 61.555 66.667 21.89 21.89 0.00 6.53
1484 1498 2.741726 GACGAGAGCGACGCAGAGA 61.742 63.158 23.70 0.00 41.64 3.10
1514 1531 0.386605 CGCTCCAAGAGATCGATCCG 60.387 60.000 21.66 11.39 0.00 4.18
1526 1543 1.447140 CGATCCGGCGGAGAAACAA 60.447 57.895 33.82 9.51 34.05 2.83
1535 1552 2.280628 GCGGAGAAACAAAGATCGGAT 58.719 47.619 0.00 0.00 0.00 4.18
1548 1565 4.744795 AGATCGGATTACAGCTTCAACT 57.255 40.909 0.00 0.00 0.00 3.16
1551 1568 4.119442 TCGGATTACAGCTTCAACTACC 57.881 45.455 0.00 0.00 0.00 3.18
1563 1580 5.189736 AGCTTCAACTACCTTCATCATGGTA 59.810 40.000 0.00 0.00 37.74 3.25
1569 1586 1.915489 ACCTTCATCATGGTACTGGCA 59.085 47.619 0.00 0.00 34.36 4.92
1578 1595 5.628797 TCATGGTACTGGCAATGAGATTA 57.371 39.130 0.00 0.00 0.00 1.75
1615 1632 3.126831 GGATCTCTAGTTTGCATGACGG 58.873 50.000 0.00 0.00 0.00 4.79
1792 1816 4.537135 TCTAGACACAGAGCGGAAAATT 57.463 40.909 0.00 0.00 0.00 1.82
1841 1865 6.771573 ACTAGTAGGCTGTATAGATTCGACT 58.228 40.000 0.00 0.00 0.00 4.18
1847 1871 6.915349 AGGCTGTATAGATTCGACTAATGTC 58.085 40.000 0.00 0.00 39.70 3.06
1917 1944 7.794041 TGAAATTATGGGAGAATGGGAAATTG 58.206 34.615 0.00 0.00 0.00 2.32
1985 2014 0.882484 GCTCTAGCGGGATTCAAGCC 60.882 60.000 0.00 0.00 0.00 4.35
2008 2037 1.135094 GATGCATTCTCCCTGGAGGA 58.865 55.000 13.12 4.87 44.91 3.71
2044 2073 4.250464 ACGATTATGTTCGCTGGAAAGAA 58.750 39.130 0.00 0.00 42.82 2.52
2045 2074 4.330074 ACGATTATGTTCGCTGGAAAGAAG 59.670 41.667 0.00 0.00 42.82 2.85
2065 2094 2.284699 CCGAGTGAACCCCCTCCT 60.285 66.667 0.00 0.00 0.00 3.69
2069 2098 1.618888 CGAGTGAACCCCCTCCTTCTA 60.619 57.143 0.00 0.00 0.00 2.10
2084 2113 6.153067 CCTCCTTCTATGTACGATAAGCTTG 58.847 44.000 9.86 0.00 0.00 4.01
2085 2114 6.239064 CCTCCTTCTATGTACGATAAGCTTGT 60.239 42.308 9.86 0.92 0.00 3.16
2087 2116 6.978659 TCCTTCTATGTACGATAAGCTTGTTG 59.021 38.462 9.86 9.26 0.00 3.33
2089 2118 7.277981 CCTTCTATGTACGATAAGCTTGTTGTT 59.722 37.037 19.83 6.47 0.00 2.83
2090 2119 7.751047 TCTATGTACGATAAGCTTGTTGTTC 57.249 36.000 19.83 15.46 0.00 3.18
2091 2120 7.544622 TCTATGTACGATAAGCTTGTTGTTCT 58.455 34.615 19.83 8.80 0.00 3.01
2092 2121 6.648725 ATGTACGATAAGCTTGTTGTTCTC 57.351 37.500 19.83 11.91 0.00 2.87
2093 2122 4.619760 TGTACGATAAGCTTGTTGTTCTCG 59.380 41.667 19.83 9.38 0.00 4.04
2094 2123 3.650139 ACGATAAGCTTGTTGTTCTCGT 58.350 40.909 9.86 4.35 33.69 4.18
2095 2124 4.801891 ACGATAAGCTTGTTGTTCTCGTA 58.198 39.130 9.86 0.00 36.46 3.43
2096 2125 5.224888 ACGATAAGCTTGTTGTTCTCGTAA 58.775 37.500 9.86 0.00 36.46 3.18
2097 2126 5.118203 ACGATAAGCTTGTTGTTCTCGTAAC 59.882 40.000 9.86 0.00 36.46 2.50
2098 2127 5.345202 CGATAAGCTTGTTGTTCTCGTAACT 59.655 40.000 9.86 0.00 0.00 2.24
2099 2128 4.795970 AAGCTTGTTGTTCTCGTAACTG 57.204 40.909 0.00 0.00 0.00 3.16
2100 2129 2.544267 AGCTTGTTGTTCTCGTAACTGC 59.456 45.455 5.30 0.00 0.00 4.40
2101 2130 2.349532 GCTTGTTGTTCTCGTAACTGCC 60.350 50.000 5.30 0.00 0.00 4.85
2102 2131 1.873698 TGTTGTTCTCGTAACTGCCC 58.126 50.000 5.30 0.00 0.00 5.36
2103 2132 1.154197 GTTGTTCTCGTAACTGCCCC 58.846 55.000 5.30 0.00 0.00 5.80
2104 2133 0.759959 TTGTTCTCGTAACTGCCCCA 59.240 50.000 5.30 0.00 0.00 4.96
2105 2134 0.320374 TGTTCTCGTAACTGCCCCAG 59.680 55.000 5.30 0.00 37.52 4.45
2120 2149 2.819477 CCAGTTGGGCCACAAAAGA 58.181 52.632 5.23 0.00 41.58 2.52
2121 2150 1.118838 CCAGTTGGGCCACAAAAGAA 58.881 50.000 5.23 0.00 41.58 2.52
2122 2151 1.069049 CCAGTTGGGCCACAAAAGAAG 59.931 52.381 5.23 0.00 41.58 2.85
2123 2152 1.069049 CAGTTGGGCCACAAAAGAAGG 59.931 52.381 5.23 0.00 41.58 3.46
2124 2153 1.063266 AGTTGGGCCACAAAAGAAGGA 60.063 47.619 5.23 0.00 41.58 3.36
2125 2154 1.341209 GTTGGGCCACAAAAGAAGGAG 59.659 52.381 5.23 0.00 41.58 3.69
2126 2155 0.827507 TGGGCCACAAAAGAAGGAGC 60.828 55.000 0.00 0.00 0.00 4.70
2127 2156 0.540597 GGGCCACAAAAGAAGGAGCT 60.541 55.000 4.39 0.00 0.00 4.09
2128 2157 0.884514 GGCCACAAAAGAAGGAGCTC 59.115 55.000 4.71 4.71 0.00 4.09
2129 2158 1.609208 GCCACAAAAGAAGGAGCTCA 58.391 50.000 17.19 0.00 0.00 4.26
2130 2159 1.538950 GCCACAAAAGAAGGAGCTCAG 59.461 52.381 17.19 0.00 0.00 3.35
2131 2160 2.856222 CCACAAAAGAAGGAGCTCAGT 58.144 47.619 17.19 1.37 0.00 3.41
2132 2161 3.217626 CCACAAAAGAAGGAGCTCAGTT 58.782 45.455 17.19 8.24 0.00 3.16
2133 2162 3.633986 CCACAAAAGAAGGAGCTCAGTTT 59.366 43.478 17.19 6.56 0.00 2.66
2134 2163 4.498682 CCACAAAAGAAGGAGCTCAGTTTG 60.499 45.833 17.19 17.59 32.76 2.93
2135 2164 3.067320 ACAAAAGAAGGAGCTCAGTTTGC 59.933 43.478 17.19 0.00 31.06 3.68
2136 2165 2.947127 AAGAAGGAGCTCAGTTTGCT 57.053 45.000 17.19 0.00 44.24 3.91
2137 2166 4.357918 AAAGAAGGAGCTCAGTTTGCTA 57.642 40.909 17.19 0.00 41.30 3.49
2138 2167 4.566426 AAGAAGGAGCTCAGTTTGCTAT 57.434 40.909 17.19 0.00 41.30 2.97
2139 2168 5.683876 AAGAAGGAGCTCAGTTTGCTATA 57.316 39.130 17.19 0.00 41.30 1.31
2140 2169 5.683876 AGAAGGAGCTCAGTTTGCTATAA 57.316 39.130 17.19 0.00 41.30 0.98
2141 2170 6.054860 AGAAGGAGCTCAGTTTGCTATAAA 57.945 37.500 17.19 0.00 41.30 1.40
2142 2171 5.877564 AGAAGGAGCTCAGTTTGCTATAAAC 59.122 40.000 17.19 0.00 41.30 2.01
2143 2172 5.428184 AGGAGCTCAGTTTGCTATAAACT 57.572 39.130 17.19 0.00 41.30 2.66
2144 2173 6.546428 AGGAGCTCAGTTTGCTATAAACTA 57.454 37.500 17.19 0.00 41.30 2.24
2145 2174 6.342111 AGGAGCTCAGTTTGCTATAAACTAC 58.658 40.000 17.19 0.00 41.30 2.73
2146 2175 6.155393 AGGAGCTCAGTTTGCTATAAACTACT 59.845 38.462 17.19 3.92 41.30 2.57
2147 2176 7.342284 AGGAGCTCAGTTTGCTATAAACTACTA 59.658 37.037 17.19 0.00 41.30 1.82
2148 2177 7.435784 GGAGCTCAGTTTGCTATAAACTACTAC 59.564 40.741 17.19 1.72 41.30 2.73
2162 2191 8.843885 ATAAACTACTACCAAGTCTCAAAACC 57.156 34.615 0.00 0.00 37.15 3.27
2163 2192 5.881923 ACTACTACCAAGTCTCAAAACCA 57.118 39.130 0.00 0.00 37.15 3.67
2170 2199 6.635030 ACCAAGTCTCAAAACCAGTATTTC 57.365 37.500 0.00 0.00 0.00 2.17
2171 2200 6.126409 ACCAAGTCTCAAAACCAGTATTTCA 58.874 36.000 0.00 0.00 0.00 2.69
2174 2203 7.435192 CCAAGTCTCAAAACCAGTATTTCAAAC 59.565 37.037 0.00 0.00 0.00 2.93
2176 2205 7.707104 AGTCTCAAAACCAGTATTTCAAACTG 58.293 34.615 0.00 0.00 43.26 3.16
2182 2211 4.406456 ACCAGTATTTCAAACTGCCATGA 58.594 39.130 0.00 0.00 42.47 3.07
2188 2217 8.839343 CAGTATTTCAAACTGCCATGACATATA 58.161 33.333 0.00 0.00 38.08 0.86
2233 2989 8.458573 TCCTAAATCTTTTAGCAAAGTGTCAA 57.541 30.769 2.20 0.00 40.47 3.18
2247 3003 9.899226 AGCAAAGTGTCAATTTAGTTCTATTTC 57.101 29.630 0.00 0.00 0.00 2.17
2279 3035 6.949578 TGCATGCTTAGTTTTTAATTCTGC 57.050 33.333 20.33 0.00 0.00 4.26
2287 3043 9.118236 GCTTAGTTTTTAATTCTGCAGTAAGTG 57.882 33.333 14.67 0.00 0.00 3.16
2301 3057 2.904434 AGTAAGTGGTTCACCCGAGATT 59.096 45.455 0.00 0.00 34.49 2.40
2303 3059 0.613777 AGTGGTTCACCCGAGATTCC 59.386 55.000 0.00 0.00 34.49 3.01
2304 3060 0.613777 GTGGTTCACCCGAGATTCCT 59.386 55.000 0.00 0.00 35.15 3.36
2310 3066 2.159382 TCACCCGAGATTCCTTTTTGC 58.841 47.619 0.00 0.00 0.00 3.68
2313 3069 1.544724 CCGAGATTCCTTTTTGCCCA 58.455 50.000 0.00 0.00 0.00 5.36
2314 3070 1.892474 CCGAGATTCCTTTTTGCCCAA 59.108 47.619 0.00 0.00 0.00 4.12
2315 3071 2.094545 CCGAGATTCCTTTTTGCCCAAG 60.095 50.000 0.00 0.00 0.00 3.61
2316 3072 2.672195 CGAGATTCCTTTTTGCCCAAGC 60.672 50.000 0.00 0.00 40.48 4.01
2333 3097 3.626154 GCGACCTGCTACACTCTAC 57.374 57.895 0.00 0.00 41.73 2.59
2334 3098 0.248134 GCGACCTGCTACACTCTACG 60.248 60.000 0.00 0.00 41.73 3.51
2336 3100 0.100861 GACCTGCTACACTCTACGGC 59.899 60.000 0.00 0.00 0.00 5.68
2337 3101 0.611062 ACCTGCTACACTCTACGGCA 60.611 55.000 0.00 0.00 0.00 5.69
2338 3102 0.101399 CCTGCTACACTCTACGGCAG 59.899 60.000 0.00 0.00 46.62 4.85
2339 3103 0.526524 CTGCTACACTCTACGGCAGC 60.527 60.000 0.00 0.00 42.63 5.25
2340 3104 1.248101 TGCTACACTCTACGGCAGCA 61.248 55.000 0.00 0.00 36.72 4.41
2341 3105 0.108804 GCTACACTCTACGGCAGCAA 60.109 55.000 0.00 0.00 0.00 3.91
2342 3106 1.471676 GCTACACTCTACGGCAGCAAT 60.472 52.381 0.00 0.00 0.00 3.56
2344 3108 1.726853 ACACTCTACGGCAGCAATTC 58.273 50.000 0.00 0.00 0.00 2.17
2347 3111 3.118775 ACACTCTACGGCAGCAATTCATA 60.119 43.478 0.00 0.00 0.00 2.15
2348 3112 3.871006 CACTCTACGGCAGCAATTCATAA 59.129 43.478 0.00 0.00 0.00 1.90
2349 3113 4.512944 CACTCTACGGCAGCAATTCATAAT 59.487 41.667 0.00 0.00 0.00 1.28
2350 3114 4.752101 ACTCTACGGCAGCAATTCATAATC 59.248 41.667 0.00 0.00 0.00 1.75
2352 3116 3.976793 ACGGCAGCAATTCATAATCAG 57.023 42.857 0.00 0.00 0.00 2.90
2353 3117 3.544684 ACGGCAGCAATTCATAATCAGA 58.455 40.909 0.00 0.00 0.00 3.27
2356 3120 4.036027 CGGCAGCAATTCATAATCAGAAGT 59.964 41.667 0.00 0.00 0.00 3.01
2357 3121 5.449588 CGGCAGCAATTCATAATCAGAAGTT 60.450 40.000 0.00 0.00 0.00 2.66
2358 3122 6.335777 GGCAGCAATTCATAATCAGAAGTTT 58.664 36.000 0.00 0.00 0.00 2.66
2360 3124 7.975616 GGCAGCAATTCATAATCAGAAGTTTAA 59.024 33.333 0.00 0.00 0.00 1.52
2385 3149 6.753107 AACATAGAAATTTAGGGTTCACCG 57.247 37.500 0.00 0.00 46.96 4.94
2386 3150 4.638865 ACATAGAAATTTAGGGTTCACCGC 59.361 41.667 0.00 0.00 46.96 5.68
2387 3151 3.434940 AGAAATTTAGGGTTCACCGCT 57.565 42.857 0.00 0.00 46.96 5.52
2388 3152 3.763057 AGAAATTTAGGGTTCACCGCTT 58.237 40.909 0.00 0.00 46.96 4.68
2389 3153 4.149598 AGAAATTTAGGGTTCACCGCTTT 58.850 39.130 0.00 0.00 46.96 3.51
2390 3154 3.934457 AATTTAGGGTTCACCGCTTTG 57.066 42.857 0.00 0.00 46.96 2.77
2391 3155 0.955905 TTTAGGGTTCACCGCTTTGC 59.044 50.000 0.00 0.00 46.96 3.68
2392 3156 0.109723 TTAGGGTTCACCGCTTTGCT 59.890 50.000 0.00 0.00 46.96 3.91
2393 3157 0.109723 TAGGGTTCACCGCTTTGCTT 59.890 50.000 0.00 0.00 46.96 3.91
2394 3158 1.172812 AGGGTTCACCGCTTTGCTTC 61.173 55.000 0.00 0.00 46.96 3.86
2395 3159 1.452145 GGGTTCACCGCTTTGCTTCA 61.452 55.000 0.00 0.00 36.71 3.02
2396 3160 0.598065 GGTTCACCGCTTTGCTTCAT 59.402 50.000 0.00 0.00 0.00 2.57
2397 3161 1.401539 GGTTCACCGCTTTGCTTCATC 60.402 52.381 0.00 0.00 0.00 2.92
2398 3162 1.537202 GTTCACCGCTTTGCTTCATCT 59.463 47.619 0.00 0.00 0.00 2.90
2399 3163 2.742053 GTTCACCGCTTTGCTTCATCTA 59.258 45.455 0.00 0.00 0.00 1.98
2400 3164 2.621338 TCACCGCTTTGCTTCATCTAG 58.379 47.619 0.00 0.00 0.00 2.43
2401 3165 2.233676 TCACCGCTTTGCTTCATCTAGA 59.766 45.455 0.00 0.00 0.00 2.43
2402 3166 3.002791 CACCGCTTTGCTTCATCTAGAA 58.997 45.455 0.00 0.00 34.41 2.10
2403 3167 3.436704 CACCGCTTTGCTTCATCTAGAAA 59.563 43.478 0.00 0.00 35.40 2.52
2404 3168 4.072131 ACCGCTTTGCTTCATCTAGAAAA 58.928 39.130 0.00 0.00 35.40 2.29
2405 3169 4.518970 ACCGCTTTGCTTCATCTAGAAAAA 59.481 37.500 0.00 0.00 35.40 1.94
2406 3170 5.183904 ACCGCTTTGCTTCATCTAGAAAAAT 59.816 36.000 0.00 0.00 35.40 1.82
2407 3171 5.741040 CCGCTTTGCTTCATCTAGAAAAATC 59.259 40.000 0.00 0.00 35.40 2.17
2408 3172 6.404074 CCGCTTTGCTTCATCTAGAAAAATCT 60.404 38.462 0.00 0.00 35.40 2.40
2409 3173 7.025963 CGCTTTGCTTCATCTAGAAAAATCTT 58.974 34.615 0.00 0.00 35.40 2.40
2410 3174 8.177663 CGCTTTGCTTCATCTAGAAAAATCTTA 58.822 33.333 0.00 0.00 35.40 2.10
2411 3175 9.283420 GCTTTGCTTCATCTAGAAAAATCTTAC 57.717 33.333 0.00 0.00 35.40 2.34
2414 3178 9.725019 TTGCTTCATCTAGAAAAATCTTACTCA 57.275 29.630 0.00 0.00 35.40 3.41
2415 3179 9.155975 TGCTTCATCTAGAAAAATCTTACTCAC 57.844 33.333 0.00 0.00 35.40 3.51
2416 3180 8.324567 GCTTCATCTAGAAAAATCTTACTCACG 58.675 37.037 0.00 0.00 35.40 4.35
2417 3181 7.757097 TCATCTAGAAAAATCTTACTCACGC 57.243 36.000 0.00 0.00 0.00 5.34
2418 3182 6.757010 TCATCTAGAAAAATCTTACTCACGCC 59.243 38.462 0.00 0.00 0.00 5.68
2419 3183 5.416947 TCTAGAAAAATCTTACTCACGCCC 58.583 41.667 0.00 0.00 0.00 6.13
2420 3184 4.015872 AGAAAAATCTTACTCACGCCCA 57.984 40.909 0.00 0.00 0.00 5.36
2421 3185 4.394729 AGAAAAATCTTACTCACGCCCAA 58.605 39.130 0.00 0.00 0.00 4.12
2422 3186 4.215613 AGAAAAATCTTACTCACGCCCAAC 59.784 41.667 0.00 0.00 0.00 3.77
2423 3187 3.418684 AAATCTTACTCACGCCCAACT 57.581 42.857 0.00 0.00 0.00 3.16
2424 3188 2.674796 ATCTTACTCACGCCCAACTC 57.325 50.000 0.00 0.00 0.00 3.01
2425 3189 1.629043 TCTTACTCACGCCCAACTCT 58.371 50.000 0.00 0.00 0.00 3.24
2426 3190 1.544691 TCTTACTCACGCCCAACTCTC 59.455 52.381 0.00 0.00 0.00 3.20
2427 3191 1.546476 CTTACTCACGCCCAACTCTCT 59.454 52.381 0.00 0.00 0.00 3.10
2428 3192 1.174783 TACTCACGCCCAACTCTCTC 58.825 55.000 0.00 0.00 0.00 3.20
2429 3193 0.540830 ACTCACGCCCAACTCTCTCT 60.541 55.000 0.00 0.00 0.00 3.10
2430 3194 0.172352 CTCACGCCCAACTCTCTCTC 59.828 60.000 0.00 0.00 0.00 3.20
2431 3195 0.251386 TCACGCCCAACTCTCTCTCT 60.251 55.000 0.00 0.00 0.00 3.10
2432 3196 0.172352 CACGCCCAACTCTCTCTCTC 59.828 60.000 0.00 0.00 0.00 3.20
2433 3197 0.039035 ACGCCCAACTCTCTCTCTCT 59.961 55.000 0.00 0.00 0.00 3.10
2434 3198 1.181786 CGCCCAACTCTCTCTCTCTT 58.818 55.000 0.00 0.00 0.00 2.85
2435 3199 1.548269 CGCCCAACTCTCTCTCTCTTT 59.452 52.381 0.00 0.00 0.00 2.52
2436 3200 2.416701 CGCCCAACTCTCTCTCTCTTTC 60.417 54.545 0.00 0.00 0.00 2.62
2437 3201 2.564947 GCCCAACTCTCTCTCTCTTTCA 59.435 50.000 0.00 0.00 0.00 2.69
2438 3202 3.368323 GCCCAACTCTCTCTCTCTTTCAG 60.368 52.174 0.00 0.00 0.00 3.02
2439 3203 4.085733 CCCAACTCTCTCTCTCTTTCAGA 58.914 47.826 0.00 0.00 0.00 3.27
2440 3204 4.526262 CCCAACTCTCTCTCTCTTTCAGAA 59.474 45.833 0.00 0.00 0.00 3.02
2441 3205 5.011533 CCCAACTCTCTCTCTCTTTCAGAAA 59.988 44.000 0.00 0.00 0.00 2.52
2442 3206 6.463614 CCCAACTCTCTCTCTCTTTCAGAAAA 60.464 42.308 0.00 0.00 0.00 2.29
2443 3207 6.989169 CCAACTCTCTCTCTCTTTCAGAAAAA 59.011 38.462 0.00 0.00 0.00 1.94
2444 3208 7.661027 CCAACTCTCTCTCTCTTTCAGAAAAAT 59.339 37.037 0.00 0.00 0.00 1.82
2445 3209 8.711457 CAACTCTCTCTCTCTTTCAGAAAAATC 58.289 37.037 0.00 0.00 0.00 2.17
2446 3210 7.961351 ACTCTCTCTCTCTTTCAGAAAAATCA 58.039 34.615 0.00 0.00 0.00 2.57
2447 3211 7.872483 ACTCTCTCTCTCTTTCAGAAAAATCAC 59.128 37.037 0.00 0.00 0.00 3.06
2448 3212 7.158021 TCTCTCTCTCTTTCAGAAAAATCACC 58.842 38.462 0.00 0.00 0.00 4.02
2449 3213 6.234177 TCTCTCTCTTTCAGAAAAATCACCC 58.766 40.000 0.00 0.00 0.00 4.61
2450 3214 5.316987 TCTCTCTTTCAGAAAAATCACCCC 58.683 41.667 0.00 0.00 0.00 4.95
2451 3215 5.060427 TCTCTTTCAGAAAAATCACCCCA 57.940 39.130 0.00 0.00 0.00 4.96
2452 3216 4.827284 TCTCTTTCAGAAAAATCACCCCAC 59.173 41.667 0.00 0.00 0.00 4.61
2453 3217 3.568007 TCTTTCAGAAAAATCACCCCACG 59.432 43.478 0.00 0.00 0.00 4.94
2454 3218 1.243902 TCAGAAAAATCACCCCACGC 58.756 50.000 0.00 0.00 0.00 5.34
2455 3219 0.243636 CAGAAAAATCACCCCACGCC 59.756 55.000 0.00 0.00 0.00 5.68
2456 3220 0.898326 AGAAAAATCACCCCACGCCC 60.898 55.000 0.00 0.00 0.00 6.13
2457 3221 1.884075 GAAAAATCACCCCACGCCCC 61.884 60.000 0.00 0.00 0.00 5.80
2458 3222 4.733542 AAATCACCCCACGCCCCG 62.734 66.667 0.00 0.00 0.00 5.73
2471 3235 4.410400 CCCCGCACCTGTTCCCTC 62.410 72.222 0.00 0.00 0.00 4.30
2472 3236 4.410400 CCCGCACCTGTTCCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
2473 3237 3.322466 CCGCACCTGTTCCCTCCT 61.322 66.667 0.00 0.00 0.00 3.69
2474 3238 2.266055 CGCACCTGTTCCCTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
2475 3239 2.266055 GCACCTGTTCCCTCCTCG 59.734 66.667 0.00 0.00 0.00 4.63
2476 3240 2.584391 GCACCTGTTCCCTCCTCGT 61.584 63.158 0.00 0.00 0.00 4.18
2477 3241 1.293498 CACCTGTTCCCTCCTCGTG 59.707 63.158 0.00 0.00 0.00 4.35
2478 3242 2.266055 CCTGTTCCCTCCTCGTGC 59.734 66.667 0.00 0.00 0.00 5.34
2479 3243 2.125912 CTGTTCCCTCCTCGTGCG 60.126 66.667 0.00 0.00 0.00 5.34
2480 3244 4.373116 TGTTCCCTCCTCGTGCGC 62.373 66.667 0.00 0.00 0.00 6.09
2498 3262 3.484547 CGCCACCGTTAACGCCTC 61.485 66.667 22.43 9.58 38.18 4.70
2499 3263 3.122971 GCCACCGTTAACGCCTCC 61.123 66.667 22.43 6.82 38.18 4.30
2500 3264 2.344500 CCACCGTTAACGCCTCCA 59.656 61.111 22.43 0.00 38.18 3.86
2501 3265 1.301874 CCACCGTTAACGCCTCCAA 60.302 57.895 22.43 0.00 38.18 3.53
2502 3266 1.296056 CCACCGTTAACGCCTCCAAG 61.296 60.000 22.43 9.35 38.18 3.61
2503 3267 0.320073 CACCGTTAACGCCTCCAAGA 60.320 55.000 22.43 0.00 38.18 3.02
2504 3268 0.037605 ACCGTTAACGCCTCCAAGAG 60.038 55.000 22.43 7.92 38.18 2.85
2505 3269 0.037605 CCGTTAACGCCTCCAAGAGT 60.038 55.000 22.43 0.00 38.18 3.24
2506 3270 1.347320 CGTTAACGCCTCCAAGAGTC 58.653 55.000 16.05 0.00 0.00 3.36
2507 3271 1.723220 GTTAACGCCTCCAAGAGTCC 58.277 55.000 0.00 0.00 0.00 3.85
2508 3272 1.001633 GTTAACGCCTCCAAGAGTCCA 59.998 52.381 0.00 0.00 0.00 4.02
2509 3273 0.895530 TAACGCCTCCAAGAGTCCAG 59.104 55.000 0.00 0.00 0.00 3.86
2510 3274 2.125350 CGCCTCCAAGAGTCCAGC 60.125 66.667 0.00 0.00 0.00 4.85
2511 3275 2.125350 GCCTCCAAGAGTCCAGCG 60.125 66.667 0.00 0.00 0.00 5.18
2512 3276 2.650116 GCCTCCAAGAGTCCAGCGA 61.650 63.158 0.00 0.00 0.00 4.93
2513 3277 1.975327 CCTCCAAGAGTCCAGCGAA 59.025 57.895 0.00 0.00 0.00 4.70
2514 3278 0.390472 CCTCCAAGAGTCCAGCGAAC 60.390 60.000 0.00 0.00 0.00 3.95
2515 3279 0.318441 CTCCAAGAGTCCAGCGAACA 59.682 55.000 0.00 0.00 0.00 3.18
2516 3280 0.756294 TCCAAGAGTCCAGCGAACAA 59.244 50.000 0.00 0.00 0.00 2.83
2517 3281 1.140052 TCCAAGAGTCCAGCGAACAAA 59.860 47.619 0.00 0.00 0.00 2.83
2518 3282 1.264288 CCAAGAGTCCAGCGAACAAAC 59.736 52.381 0.00 0.00 0.00 2.93
2519 3283 1.264288 CAAGAGTCCAGCGAACAAACC 59.736 52.381 0.00 0.00 0.00 3.27
2520 3284 0.468226 AGAGTCCAGCGAACAAACCA 59.532 50.000 0.00 0.00 0.00 3.67
2521 3285 1.072331 AGAGTCCAGCGAACAAACCAT 59.928 47.619 0.00 0.00 0.00 3.55
2522 3286 1.197721 GAGTCCAGCGAACAAACCATG 59.802 52.381 0.00 0.00 0.00 3.66
2523 3287 0.240945 GTCCAGCGAACAAACCATGG 59.759 55.000 11.19 11.19 0.00 3.66
2524 3288 0.109532 TCCAGCGAACAAACCATGGA 59.890 50.000 21.47 0.00 34.54 3.41
2525 3289 0.523072 CCAGCGAACAAACCATGGAG 59.477 55.000 21.47 10.40 0.00 3.86
2526 3290 0.109597 CAGCGAACAAACCATGGAGC 60.110 55.000 21.47 11.34 0.00 4.70
2527 3291 0.537143 AGCGAACAAACCATGGAGCA 60.537 50.000 21.47 0.00 31.91 4.26
2528 3292 0.387239 GCGAACAAACCATGGAGCAC 60.387 55.000 21.47 3.68 0.00 4.40
2529 3293 0.240945 CGAACAAACCATGGAGCACC 59.759 55.000 21.47 0.00 0.00 5.01
2541 3305 2.132300 GAGCACCATCTCCTCTCCC 58.868 63.158 0.00 0.00 0.00 4.30
2542 3306 0.398381 GAGCACCATCTCCTCTCCCT 60.398 60.000 0.00 0.00 0.00 4.20
2543 3307 0.398381 AGCACCATCTCCTCTCCCTC 60.398 60.000 0.00 0.00 0.00 4.30
2544 3308 1.406860 GCACCATCTCCTCTCCCTCC 61.407 65.000 0.00 0.00 0.00 4.30
2545 3309 0.031716 CACCATCTCCTCTCCCTCCA 60.032 60.000 0.00 0.00 0.00 3.86
2546 3310 0.948050 ACCATCTCCTCTCCCTCCAT 59.052 55.000 0.00 0.00 0.00 3.41
2547 3311 1.132881 ACCATCTCCTCTCCCTCCATC 60.133 57.143 0.00 0.00 0.00 3.51
2548 3312 1.149711 CCATCTCCTCTCCCTCCATCT 59.850 57.143 0.00 0.00 0.00 2.90
2549 3313 2.250031 CATCTCCTCTCCCTCCATCTG 58.750 57.143 0.00 0.00 0.00 2.90
2550 3314 0.105760 TCTCCTCTCCCTCCATCTGC 60.106 60.000 0.00 0.00 0.00 4.26
2551 3315 1.456518 TCCTCTCCCTCCATCTGCG 60.457 63.158 0.00 0.00 0.00 5.18
2552 3316 2.506061 CCTCTCCCTCCATCTGCGG 61.506 68.421 0.00 0.00 0.00 5.69
2553 3317 3.157252 TCTCCCTCCATCTGCGGC 61.157 66.667 0.00 0.00 0.00 6.53
2554 3318 3.160047 CTCCCTCCATCTGCGGCT 61.160 66.667 0.00 0.00 0.00 5.52
2555 3319 3.157252 TCCCTCCATCTGCGGCTC 61.157 66.667 0.00 0.00 0.00 4.70
2556 3320 3.160047 CCCTCCATCTGCGGCTCT 61.160 66.667 0.00 0.00 0.00 4.09
2557 3321 2.420890 CCTCCATCTGCGGCTCTC 59.579 66.667 0.00 0.00 0.00 3.20
2558 3322 2.132996 CCTCCATCTGCGGCTCTCT 61.133 63.158 0.00 0.00 0.00 3.10
2559 3323 1.363443 CTCCATCTGCGGCTCTCTC 59.637 63.158 0.00 0.00 0.00 3.20
2560 3324 2.086251 CTCCATCTGCGGCTCTCTCC 62.086 65.000 0.00 0.00 0.00 3.71
2561 3325 2.420890 CATCTGCGGCTCTCTCCC 59.579 66.667 0.00 0.00 0.00 4.30
2562 3326 2.132996 CATCTGCGGCTCTCTCCCT 61.133 63.158 0.00 0.00 0.00 4.20
2563 3327 2.132996 ATCTGCGGCTCTCTCCCTG 61.133 63.158 0.00 0.00 0.00 4.45
2564 3328 2.870035 ATCTGCGGCTCTCTCCCTGT 62.870 60.000 0.00 0.00 0.00 4.00
2565 3329 2.604686 TGCGGCTCTCTCCCTGTT 60.605 61.111 0.00 0.00 0.00 3.16
2566 3330 2.185608 GCGGCTCTCTCCCTGTTC 59.814 66.667 0.00 0.00 0.00 3.18
2567 3331 2.896443 CGGCTCTCTCCCTGTTCC 59.104 66.667 0.00 0.00 0.00 3.62
2568 3332 1.684049 CGGCTCTCTCCCTGTTCCT 60.684 63.158 0.00 0.00 0.00 3.36
2569 3333 1.671901 CGGCTCTCTCCCTGTTCCTC 61.672 65.000 0.00 0.00 0.00 3.71
2570 3334 1.334384 GGCTCTCTCCCTGTTCCTCC 61.334 65.000 0.00 0.00 0.00 4.30
2571 3335 0.616111 GCTCTCTCCCTGTTCCTCCA 60.616 60.000 0.00 0.00 0.00 3.86
2572 3336 1.190643 CTCTCTCCCTGTTCCTCCAC 58.809 60.000 0.00 0.00 0.00 4.02
2573 3337 0.787084 TCTCTCCCTGTTCCTCCACT 59.213 55.000 0.00 0.00 0.00 4.00
2574 3338 1.190643 CTCTCCCTGTTCCTCCACTC 58.809 60.000 0.00 0.00 0.00 3.51
2575 3339 0.252284 TCTCCCTGTTCCTCCACTCC 60.252 60.000 0.00 0.00 0.00 3.85
2576 3340 0.252467 CTCCCTGTTCCTCCACTCCT 60.252 60.000 0.00 0.00 0.00 3.69
2577 3341 0.252284 TCCCTGTTCCTCCACTCCTC 60.252 60.000 0.00 0.00 0.00 3.71
2578 3342 0.252467 CCCTGTTCCTCCACTCCTCT 60.252 60.000 0.00 0.00 0.00 3.69
2579 3343 1.650528 CCTGTTCCTCCACTCCTCTT 58.349 55.000 0.00 0.00 0.00 2.85
2580 3344 1.981495 CCTGTTCCTCCACTCCTCTTT 59.019 52.381 0.00 0.00 0.00 2.52
2581 3345 2.027653 CCTGTTCCTCCACTCCTCTTTC 60.028 54.545 0.00 0.00 0.00 2.62
2582 3346 2.903135 CTGTTCCTCCACTCCTCTTTCT 59.097 50.000 0.00 0.00 0.00 2.52
2583 3347 2.900546 TGTTCCTCCACTCCTCTTTCTC 59.099 50.000 0.00 0.00 0.00 2.87
2584 3348 2.235155 GTTCCTCCACTCCTCTTTCTCC 59.765 54.545 0.00 0.00 0.00 3.71
2585 3349 1.199615 CCTCCACTCCTCTTTCTCCC 58.800 60.000 0.00 0.00 0.00 4.30
2586 3350 1.273552 CCTCCACTCCTCTTTCTCCCT 60.274 57.143 0.00 0.00 0.00 4.20
2587 3351 2.107366 CTCCACTCCTCTTTCTCCCTC 58.893 57.143 0.00 0.00 0.00 4.30
2588 3352 0.820871 CCACTCCTCTTTCTCCCTCG 59.179 60.000 0.00 0.00 0.00 4.63
2589 3353 0.820871 CACTCCTCTTTCTCCCTCGG 59.179 60.000 0.00 0.00 0.00 4.63
2590 3354 0.705253 ACTCCTCTTTCTCCCTCGGA 59.295 55.000 0.00 0.00 0.00 4.55
2591 3355 1.289530 ACTCCTCTTTCTCCCTCGGAT 59.710 52.381 0.00 0.00 0.00 4.18
2592 3356 1.960689 CTCCTCTTTCTCCCTCGGATC 59.039 57.143 0.00 0.00 0.00 3.36
2593 3357 0.671251 CCTCTTTCTCCCTCGGATCG 59.329 60.000 0.00 0.00 0.00 3.69
2594 3358 1.681538 CTCTTTCTCCCTCGGATCGA 58.318 55.000 0.00 0.00 0.00 3.59
2602 3366 4.933064 CTCGGATCGAGCGTGGCC 62.933 72.222 0.00 0.00 46.75 5.36
2605 3369 4.899239 GGATCGAGCGTGGCCTGG 62.899 72.222 3.32 0.00 0.00 4.45
2606 3370 3.838271 GATCGAGCGTGGCCTGGA 61.838 66.667 3.32 0.00 0.00 3.86
2608 3372 3.376935 ATCGAGCGTGGCCTGGAAG 62.377 63.158 3.32 0.00 0.00 3.46
2610 3374 2.347490 GAGCGTGGCCTGGAAGAA 59.653 61.111 3.32 0.00 34.07 2.52
2611 3375 1.743252 GAGCGTGGCCTGGAAGAAG 60.743 63.158 3.32 0.00 34.07 2.85
2612 3376 2.747855 GCGTGGCCTGGAAGAAGG 60.748 66.667 3.32 0.00 40.63 3.46
2613 3377 2.045926 CGTGGCCTGGAAGAAGGG 60.046 66.667 3.32 0.00 37.84 3.95
2615 3379 1.460699 GTGGCCTGGAAGAAGGGTT 59.539 57.895 3.32 0.00 37.84 4.11
2616 3380 0.609406 GTGGCCTGGAAGAAGGGTTC 60.609 60.000 3.32 0.00 37.84 3.62
2617 3381 1.000771 GGCCTGGAAGAAGGGTTCC 60.001 63.158 0.00 0.00 45.63 3.62
2623 3387 2.498644 GGAAGAAGGGTTCCAGAAGG 57.501 55.000 0.00 0.00 44.89 3.46
2624 3388 1.004862 GGAAGAAGGGTTCCAGAAGGG 59.995 57.143 0.00 0.00 44.89 3.95
2625 3389 0.405973 AAGAAGGGTTCCAGAAGGGC 59.594 55.000 0.00 0.00 36.21 5.19
2626 3390 1.000771 GAAGGGTTCCAGAAGGGCC 60.001 63.158 0.00 0.00 36.21 5.80
2628 3392 4.426313 GGGTTCCAGAAGGGCCGG 62.426 72.222 0.00 0.00 36.21 6.13
2630 3394 4.344865 GTTCCAGAAGGGCCGGCA 62.345 66.667 30.85 0.51 36.21 5.69
2631 3395 4.033776 TTCCAGAAGGGCCGGCAG 62.034 66.667 30.85 9.94 36.21 4.85
2650 3414 2.741985 CACGGATGCGTGCCAGAA 60.742 61.111 26.70 0.00 32.99 3.02
2652 3416 2.034879 ACGGATGCGTGCCAGAAAG 61.035 57.895 12.84 0.00 0.00 2.62
2653 3417 2.486966 GGATGCGTGCCAGAAAGC 59.513 61.111 0.00 0.00 0.00 3.51
2654 3418 2.099062 GATGCGTGCCAGAAAGCG 59.901 61.111 0.00 0.00 34.65 4.68
2655 3419 2.669569 ATGCGTGCCAGAAAGCGT 60.670 55.556 0.00 0.00 34.65 5.07
2656 3420 2.568935 GATGCGTGCCAGAAAGCGTC 62.569 60.000 0.00 0.00 38.26 5.19
2658 3422 4.430423 CGTGCCAGAAAGCGTCGC 62.430 66.667 9.80 9.80 34.65 5.19
2660 3424 4.314440 TGCCAGAAAGCGTCGCCT 62.314 61.111 14.86 0.00 34.65 5.52
2661 3425 3.491652 GCCAGAAAGCGTCGCCTC 61.492 66.667 14.86 11.18 0.00 4.70
2662 3426 2.262915 CCAGAAAGCGTCGCCTCT 59.737 61.111 14.86 13.43 0.00 3.69
2663 3427 2.097038 CCAGAAAGCGTCGCCTCTG 61.097 63.158 27.87 27.87 38.17 3.35
2664 3428 2.097038 CAGAAAGCGTCGCCTCTGG 61.097 63.158 27.45 15.50 36.20 3.86
2665 3429 2.815647 GAAAGCGTCGCCTCTGGG 60.816 66.667 14.86 0.00 0.00 4.45
2747 3511 2.952783 CGCGCCATTGATGCTTGC 60.953 61.111 0.00 0.00 0.00 4.01
2750 3514 1.870458 CGCCATTGATGCTTGCACG 60.870 57.895 0.00 0.00 0.00 5.34
2751 3515 1.517694 GCCATTGATGCTTGCACGG 60.518 57.895 0.00 0.00 0.00 4.94
2752 3516 1.885157 CCATTGATGCTTGCACGGT 59.115 52.632 0.00 0.00 0.00 4.83
2754 3518 0.457166 CATTGATGCTTGCACGGTGG 60.457 55.000 10.60 0.00 0.00 4.61
2755 3519 0.608856 ATTGATGCTTGCACGGTGGA 60.609 50.000 10.60 3.79 0.00 4.02
2756 3520 1.236616 TTGATGCTTGCACGGTGGAG 61.237 55.000 10.60 2.77 0.00 3.86
2757 3521 2.360350 ATGCTTGCACGGTGGAGG 60.360 61.111 10.60 8.93 0.00 4.30
2758 3522 3.925630 ATGCTTGCACGGTGGAGGG 62.926 63.158 13.28 7.04 0.00 4.30
2824 3628 3.717294 ATGGGGGCGTCGCTTTCT 61.717 61.111 18.11 0.00 0.00 2.52
2825 3629 3.268103 ATGGGGGCGTCGCTTTCTT 62.268 57.895 18.11 2.43 0.00 2.52
2827 3631 3.488090 GGGGCGTCGCTTTCTTCG 61.488 66.667 18.11 0.00 0.00 3.79
2828 3632 2.431942 GGGCGTCGCTTTCTTCGA 60.432 61.111 18.11 0.00 0.00 3.71
2833 3637 4.261888 TCGCTTTCTTCGACCAGC 57.738 55.556 0.00 0.00 0.00 4.85
2834 3638 1.365999 TCGCTTTCTTCGACCAGCA 59.634 52.632 5.46 0.00 32.17 4.41
2836 3640 1.869690 GCTTTCTTCGACCAGCACC 59.130 57.895 0.00 0.00 32.17 5.01
2837 3641 1.901650 GCTTTCTTCGACCAGCACCG 61.902 60.000 0.00 0.00 32.17 4.94
2838 3642 1.291877 CTTTCTTCGACCAGCACCGG 61.292 60.000 0.00 0.00 0.00 5.28
2839 3643 2.035237 TTTCTTCGACCAGCACCGGT 62.035 55.000 0.00 0.00 43.91 5.28
2844 3648 3.681835 GACCAGCACCGGTCGACT 61.682 66.667 16.46 0.00 45.77 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.632080 CCACACTGGGCCGTACCA 61.632 66.667 0.00 0.00 42.05 3.25
44 45 3.782244 GAAGCGAGCGCCACACTG 61.782 66.667 11.66 0.00 43.17 3.66
45 46 3.923563 GAGAAGCGAGCGCCACACT 62.924 63.158 11.66 5.91 43.17 3.55
46 47 3.482783 GAGAAGCGAGCGCCACAC 61.483 66.667 11.66 1.34 43.17 3.82
52 53 2.071844 TATTCCCCGAGAAGCGAGCG 62.072 60.000 0.00 0.00 44.57 5.03
53 54 0.319125 CTATTCCCCGAGAAGCGAGC 60.319 60.000 0.00 0.00 44.57 5.03
54 55 0.315568 CCTATTCCCCGAGAAGCGAG 59.684 60.000 0.00 0.00 44.57 5.03
55 56 0.106369 TCCTATTCCCCGAGAAGCGA 60.106 55.000 0.00 0.00 44.57 4.93
56 57 0.315568 CTCCTATTCCCCGAGAAGCG 59.684 60.000 0.00 0.00 38.07 4.68
57 58 0.682292 CCTCCTATTCCCCGAGAAGC 59.318 60.000 0.00 0.00 38.07 3.86
58 59 1.964933 GACCTCCTATTCCCCGAGAAG 59.035 57.143 0.00 0.00 38.07 2.85
59 60 1.412649 GGACCTCCTATTCCCCGAGAA 60.413 57.143 0.00 0.00 39.32 2.87
60 61 0.187851 GGACCTCCTATTCCCCGAGA 59.812 60.000 0.00 0.00 0.00 4.04
61 62 0.832559 GGGACCTCCTATTCCCCGAG 60.833 65.000 0.00 0.00 45.40 4.63
62 63 1.235112 GGGACCTCCTATTCCCCGA 59.765 63.158 0.00 0.00 45.40 5.14
63 64 3.887311 GGGACCTCCTATTCCCCG 58.113 66.667 0.00 0.00 45.40 5.73
80 81 0.320771 ACAAGCACTACAGGCCGAAG 60.321 55.000 0.00 0.00 0.00 3.79
81 82 0.320421 GACAAGCACTACAGGCCGAA 60.320 55.000 0.00 0.00 0.00 4.30
82 83 1.185618 AGACAAGCACTACAGGCCGA 61.186 55.000 0.00 0.00 0.00 5.54
83 84 0.320771 AAGACAAGCACTACAGGCCG 60.321 55.000 0.00 0.00 0.00 6.13
84 85 1.443802 GAAGACAAGCACTACAGGCC 58.556 55.000 0.00 0.00 0.00 5.19
85 86 1.071605 CGAAGACAAGCACTACAGGC 58.928 55.000 0.00 0.00 0.00 4.85
86 87 2.329379 GACGAAGACAAGCACTACAGG 58.671 52.381 0.00 0.00 0.00 4.00
87 88 2.029828 AGGACGAAGACAAGCACTACAG 60.030 50.000 0.00 0.00 0.00 2.74
88 89 1.961394 AGGACGAAGACAAGCACTACA 59.039 47.619 0.00 0.00 0.00 2.74
89 90 2.726832 AGGACGAAGACAAGCACTAC 57.273 50.000 0.00 0.00 0.00 2.73
90 91 3.746045 AAAGGACGAAGACAAGCACTA 57.254 42.857 0.00 0.00 0.00 2.74
91 92 2.622064 AAAGGACGAAGACAAGCACT 57.378 45.000 0.00 0.00 0.00 4.40
92 93 4.691216 AGATAAAAGGACGAAGACAAGCAC 59.309 41.667 0.00 0.00 0.00 4.40
93 94 4.894784 AGATAAAAGGACGAAGACAAGCA 58.105 39.130 0.00 0.00 0.00 3.91
94 95 4.929808 TGAGATAAAAGGACGAAGACAAGC 59.070 41.667 0.00 0.00 0.00 4.01
95 96 7.602517 ATTGAGATAAAAGGACGAAGACAAG 57.397 36.000 0.00 0.00 0.00 3.16
96 97 7.979444 AATTGAGATAAAAGGACGAAGACAA 57.021 32.000 0.00 0.00 0.00 3.18
97 98 7.878127 AGAAATTGAGATAAAAGGACGAAGACA 59.122 33.333 0.00 0.00 0.00 3.41
98 99 8.257830 AGAAATTGAGATAAAAGGACGAAGAC 57.742 34.615 0.00 0.00 0.00 3.01
99 100 8.314751 AGAGAAATTGAGATAAAAGGACGAAGA 58.685 33.333 0.00 0.00 0.00 2.87
100 101 8.485976 AGAGAAATTGAGATAAAAGGACGAAG 57.514 34.615 0.00 0.00 0.00 3.79
101 102 8.848474 AAGAGAAATTGAGATAAAAGGACGAA 57.152 30.769 0.00 0.00 0.00 3.85
102 103 8.848474 AAAGAGAAATTGAGATAAAAGGACGA 57.152 30.769 0.00 0.00 0.00 4.20
138 139 7.006509 TGGAACTCAGAGGAATTGAGATTTTT 58.993 34.615 9.06 0.00 43.75 1.94
139 140 6.546484 TGGAACTCAGAGGAATTGAGATTTT 58.454 36.000 9.06 0.00 43.75 1.82
140 141 6.131972 TGGAACTCAGAGGAATTGAGATTT 57.868 37.500 9.06 0.00 43.75 2.17
141 142 5.743117 CTGGAACTCAGAGGAATTGAGATT 58.257 41.667 9.06 0.79 46.18 2.40
142 143 4.383989 GCTGGAACTCAGAGGAATTGAGAT 60.384 45.833 9.06 0.00 46.18 2.75
143 144 3.055530 GCTGGAACTCAGAGGAATTGAGA 60.056 47.826 9.06 0.00 46.18 3.27
144 145 3.055240 AGCTGGAACTCAGAGGAATTGAG 60.055 47.826 1.53 0.98 46.18 3.02
145 146 2.909006 AGCTGGAACTCAGAGGAATTGA 59.091 45.455 1.53 0.00 46.18 2.57
146 147 3.008330 CAGCTGGAACTCAGAGGAATTG 58.992 50.000 5.57 0.00 46.18 2.32
147 148 2.641815 ACAGCTGGAACTCAGAGGAATT 59.358 45.455 19.93 0.00 46.18 2.17
148 149 2.027377 CACAGCTGGAACTCAGAGGAAT 60.027 50.000 19.93 0.00 46.18 3.01
149 150 1.345741 CACAGCTGGAACTCAGAGGAA 59.654 52.381 19.93 0.00 46.18 3.36
150 151 0.972134 CACAGCTGGAACTCAGAGGA 59.028 55.000 19.93 0.00 46.18 3.71
151 152 0.683973 ACACAGCTGGAACTCAGAGG 59.316 55.000 19.93 0.00 46.18 3.69
152 153 3.667497 TTACACAGCTGGAACTCAGAG 57.333 47.619 19.93 0.00 46.18 3.35
153 154 4.569943 GAATTACACAGCTGGAACTCAGA 58.430 43.478 19.93 0.00 46.18 3.27
154 155 3.369147 CGAATTACACAGCTGGAACTCAG 59.631 47.826 19.93 0.00 46.03 3.35
155 156 3.006430 TCGAATTACACAGCTGGAACTCA 59.994 43.478 19.93 0.00 0.00 3.41
156 157 3.585862 TCGAATTACACAGCTGGAACTC 58.414 45.455 19.93 7.59 0.00 3.01
157 158 3.589988 CTCGAATTACACAGCTGGAACT 58.410 45.455 19.93 0.00 0.00 3.01
158 159 2.094417 GCTCGAATTACACAGCTGGAAC 59.906 50.000 19.93 1.30 0.00 3.62
159 160 2.028112 AGCTCGAATTACACAGCTGGAA 60.028 45.455 19.93 9.51 40.79 3.53
160 161 1.550524 AGCTCGAATTACACAGCTGGA 59.449 47.619 19.93 1.59 40.79 3.86
161 162 2.015736 AGCTCGAATTACACAGCTGG 57.984 50.000 19.93 9.66 40.79 4.85
162 163 3.549471 CAGTAGCTCGAATTACACAGCTG 59.451 47.826 13.48 13.48 42.30 4.24
163 164 3.193691 ACAGTAGCTCGAATTACACAGCT 59.806 43.478 0.00 3.35 44.50 4.24
164 165 3.304559 CACAGTAGCTCGAATTACACAGC 59.695 47.826 0.00 0.00 0.00 4.40
165 166 4.733850 TCACAGTAGCTCGAATTACACAG 58.266 43.478 0.00 2.06 0.00 3.66
166 167 4.776795 TCACAGTAGCTCGAATTACACA 57.223 40.909 0.00 0.00 0.00 3.72
167 168 5.583495 AGATCACAGTAGCTCGAATTACAC 58.417 41.667 0.00 0.00 0.00 2.90
168 169 5.836821 AGATCACAGTAGCTCGAATTACA 57.163 39.130 0.00 0.00 0.00 2.41
169 170 7.701078 TGTTAAGATCACAGTAGCTCGAATTAC 59.299 37.037 0.00 0.00 0.00 1.89
170 171 7.701078 GTGTTAAGATCACAGTAGCTCGAATTA 59.299 37.037 0.00 0.00 36.05 1.40
171 172 6.531948 GTGTTAAGATCACAGTAGCTCGAATT 59.468 38.462 0.00 0.00 36.05 2.17
172 173 6.037098 GTGTTAAGATCACAGTAGCTCGAAT 58.963 40.000 0.00 0.00 36.05 3.34
173 174 5.183331 AGTGTTAAGATCACAGTAGCTCGAA 59.817 40.000 0.00 0.00 38.16 3.71
174 175 4.700692 AGTGTTAAGATCACAGTAGCTCGA 59.299 41.667 0.00 0.00 38.16 4.04
175 176 4.795795 CAGTGTTAAGATCACAGTAGCTCG 59.204 45.833 0.00 0.00 38.16 5.03
176 177 5.105752 CCAGTGTTAAGATCACAGTAGCTC 58.894 45.833 0.00 0.00 38.16 4.09
177 178 4.621747 GCCAGTGTTAAGATCACAGTAGCT 60.622 45.833 0.00 0.00 38.16 3.32
178 179 3.619038 GCCAGTGTTAAGATCACAGTAGC 59.381 47.826 0.00 0.00 38.16 3.58
179 180 4.184629 GGCCAGTGTTAAGATCACAGTAG 58.815 47.826 0.00 0.00 38.16 2.57
184 185 2.094762 ACGGCCAGTGTTAAGATCAC 57.905 50.000 2.24 0.00 36.22 3.06
260 261 3.635268 GACCTGGGCTGGGCTCTTG 62.635 68.421 0.00 0.00 30.82 3.02
307 308 2.104331 GCGTGACGGTCATCGGAT 59.896 61.111 23.95 0.00 44.45 4.18
311 312 0.163788 CACTTTGCGTGACGGTCATC 59.836 55.000 14.78 9.89 46.81 2.92
312 313 0.531974 ACACTTTGCGTGACGGTCAT 60.532 50.000 14.78 0.00 46.81 3.06
330 331 2.295253 ACCTTCGTGAATCATCGGAC 57.705 50.000 5.66 0.00 0.00 4.79
348 349 1.060937 CGCAATCCGCAAGCAGTAC 59.939 57.895 0.00 0.00 42.60 2.73
351 352 2.099062 GTCGCAATCCGCAAGCAG 59.901 61.111 0.00 0.00 42.60 4.24
352 353 3.787676 CGTCGCAATCCGCAAGCA 61.788 61.111 0.00 0.00 42.60 3.91
355 356 3.418913 CACCGTCGCAATCCGCAA 61.419 61.111 0.00 0.00 42.60 4.85
368 369 1.918868 GCGCCTTTTAACTCCCACCG 61.919 60.000 0.00 0.00 0.00 4.94
370 371 0.955905 TTGCGCCTTTTAACTCCCAC 59.044 50.000 4.18 0.00 0.00 4.61
430 432 0.612174 TCTTGACTGGTAGCTCGGCT 60.612 55.000 0.00 3.87 43.41 5.52
448 450 1.375098 GCTGCTGCCTCCATTGACTC 61.375 60.000 3.85 0.00 0.00 3.36
449 451 1.378250 GCTGCTGCCTCCATTGACT 60.378 57.895 3.85 0.00 0.00 3.41
450 452 3.194719 GCTGCTGCCTCCATTGAC 58.805 61.111 3.85 0.00 0.00 3.18
484 486 0.964358 CCGTGTACTCCTCCGACCTT 60.964 60.000 0.00 0.00 0.00 3.50
536 538 4.655649 TGATCATATGCTCACCAGTAACCT 59.344 41.667 5.14 0.00 0.00 3.50
627 632 0.737219 ACACGTAGATACTCACGCCC 59.263 55.000 0.00 0.00 41.80 6.13
630 635 2.593811 CGTCGACACGTAGATACTCACG 60.594 54.545 17.16 0.00 41.42 4.35
631 636 2.953870 CGTCGACACGTAGATACTCAC 58.046 52.381 17.16 0.00 41.42 3.51
692 697 0.100861 GAGACCGGATCAAGTCGTCC 59.899 60.000 9.46 0.00 38.08 4.79
693 698 0.100861 GGAGACCGGATCAAGTCGTC 59.899 60.000 9.46 0.00 38.08 4.20
694 699 1.654954 CGGAGACCGGATCAAGTCGT 61.655 60.000 9.46 0.00 44.15 4.34
730 735 1.620323 CACACCTGACCTGACATGAGA 59.380 52.381 0.00 0.00 0.00 3.27
731 736 1.620323 TCACACCTGACCTGACATGAG 59.380 52.381 0.00 0.00 0.00 2.90
755 760 4.800554 CCAGCGGGAACTTTCAGT 57.199 55.556 0.00 0.00 35.59 3.41
838 843 1.343465 GGAAGACTTGGGAGTTGACGA 59.657 52.381 0.00 0.00 35.88 4.20
859 864 1.527736 TCGAACCAAACCAATTCGTCG 59.472 47.619 5.61 0.00 44.28 5.12
890 895 4.306245 CGGGTATTCCTGGCCCTA 57.694 61.111 0.00 0.00 40.22 3.53
923 928 1.613925 CTCGTGGAGGAAGACTGAACA 59.386 52.381 0.00 0.00 0.00 3.18
978 983 2.502947 TCCATTGATCTCCACTCCACTG 59.497 50.000 0.00 0.00 0.00 3.66
1033 1038 0.394899 CTTGGCCTCCATTCTCCCAC 60.395 60.000 3.32 0.00 31.53 4.61
1140 1145 2.204461 TGTCAACGGCGGAGAGGAA 61.204 57.895 13.24 0.00 0.00 3.36
1286 1291 2.126189 GTTACGGCGTCGGAGCTT 60.126 61.111 19.21 0.00 41.39 3.74
1406 1420 1.153745 GCCTCGATGTTCACGCTCT 60.154 57.895 0.00 0.00 0.00 4.09
1484 1498 0.882042 CTTGGAGCGCGGCATATTCT 60.882 55.000 8.83 0.00 0.00 2.40
1514 1531 0.727398 CCGATCTTTGTTTCTCCGCC 59.273 55.000 0.00 0.00 0.00 6.13
1526 1543 5.091261 AGTTGAAGCTGTAATCCGATCTT 57.909 39.130 0.00 0.00 0.00 2.40
1535 1552 6.109156 TGATGAAGGTAGTTGAAGCTGTAA 57.891 37.500 0.00 0.00 0.00 2.41
1548 1565 3.111484 TGCCAGTACCATGATGAAGGTA 58.889 45.455 0.00 0.00 39.31 3.08
1551 1568 4.201657 TCATTGCCAGTACCATGATGAAG 58.798 43.478 0.00 0.00 0.00 3.02
1563 1580 2.632377 CACGGTAATCTCATTGCCAGT 58.368 47.619 4.51 1.15 44.18 4.00
1569 1586 1.742411 CGCCACCACGGTAATCTCATT 60.742 52.381 0.00 0.00 36.97 2.57
1615 1632 1.402787 CTCCTCTCCTCTGCTTCTCC 58.597 60.000 0.00 0.00 0.00 3.71
1648 1665 1.376037 CACCCGGCCTCTGTTTCTC 60.376 63.158 0.00 0.00 0.00 2.87
1649 1666 2.750350 CACCCGGCCTCTGTTTCT 59.250 61.111 0.00 0.00 0.00 2.52
1676 1693 3.744238 TTCTTGTTCATCTCGTCCACA 57.256 42.857 0.00 0.00 0.00 4.17
1769 1786 3.510388 TTTCCGCTCTGTGTCTAGATG 57.490 47.619 0.00 0.00 0.00 2.90
1770 1787 4.744795 ATTTTCCGCTCTGTGTCTAGAT 57.255 40.909 0.00 0.00 0.00 1.98
1792 1816 5.008712 CACTCTACAATCTGCGGAGTACATA 59.991 44.000 3.10 0.00 33.19 2.29
1851 1875 3.285484 CTTATGCAGGACAGCCATTTCT 58.715 45.455 0.00 0.00 36.29 2.52
1917 1944 7.010923 TCCATTGCAAAATTGTAACAGAACAAC 59.989 33.333 1.71 0.00 41.89 3.32
1985 2014 1.019673 CCAGGGAGAATGCATCGTTG 58.980 55.000 0.00 0.00 0.00 4.10
2028 2057 1.168714 GGCTTCTTTCCAGCGAACAT 58.831 50.000 0.00 0.00 38.24 2.71
2065 2094 8.033038 AGAACAACAAGCTTATCGTACATAGAA 58.967 33.333 0.00 0.00 0.00 2.10
2069 2098 5.288712 CGAGAACAACAAGCTTATCGTACAT 59.711 40.000 0.00 0.00 0.00 2.29
2084 2113 1.154197 GGGGCAGTTACGAGAACAAC 58.846 55.000 7.51 0.16 0.00 3.32
2085 2114 0.759959 TGGGGCAGTTACGAGAACAA 59.240 50.000 7.51 0.00 0.00 2.83
2087 2116 0.320697 ACTGGGGCAGTTACGAGAAC 59.679 55.000 0.00 0.00 42.59 3.01
2089 2118 4.533318 ACTGGGGCAGTTACGAGA 57.467 55.556 0.00 0.00 42.59 4.04
2102 2131 1.069049 CTTCTTTTGTGGCCCAACTGG 59.931 52.381 0.00 0.00 31.20 4.00
2103 2132 1.069049 CCTTCTTTTGTGGCCCAACTG 59.931 52.381 0.00 0.07 31.20 3.16
2104 2133 1.063266 TCCTTCTTTTGTGGCCCAACT 60.063 47.619 0.00 0.00 31.20 3.16
2105 2134 1.341209 CTCCTTCTTTTGTGGCCCAAC 59.659 52.381 0.00 0.00 31.20 3.77
2106 2135 1.703411 CTCCTTCTTTTGTGGCCCAA 58.297 50.000 0.00 0.55 0.00 4.12
2107 2136 0.827507 GCTCCTTCTTTTGTGGCCCA 60.828 55.000 0.00 0.00 0.00 5.36
2108 2137 0.540597 AGCTCCTTCTTTTGTGGCCC 60.541 55.000 0.00 0.00 0.00 5.80
2109 2138 0.884514 GAGCTCCTTCTTTTGTGGCC 59.115 55.000 0.87 0.00 0.00 5.36
2110 2139 1.538950 CTGAGCTCCTTCTTTTGTGGC 59.461 52.381 12.15 0.00 0.00 5.01
2111 2140 2.856222 ACTGAGCTCCTTCTTTTGTGG 58.144 47.619 12.15 0.00 0.00 4.17
2112 2141 4.604976 CAAACTGAGCTCCTTCTTTTGTG 58.395 43.478 12.15 0.00 0.00 3.33
2113 2142 3.067320 GCAAACTGAGCTCCTTCTTTTGT 59.933 43.478 12.15 0.00 0.00 2.83
2114 2143 3.317430 AGCAAACTGAGCTCCTTCTTTTG 59.683 43.478 12.15 13.27 38.01 2.44
2115 2144 3.560105 AGCAAACTGAGCTCCTTCTTTT 58.440 40.909 12.15 0.49 38.01 2.27
2116 2145 3.220674 AGCAAACTGAGCTCCTTCTTT 57.779 42.857 12.15 0.37 38.01 2.52
2117 2146 2.947127 AGCAAACTGAGCTCCTTCTT 57.053 45.000 12.15 0.00 38.01 2.52
2118 2147 5.683876 TTATAGCAAACTGAGCTCCTTCT 57.316 39.130 12.15 2.55 42.32 2.85
2119 2148 5.877564 AGTTTATAGCAAACTGAGCTCCTTC 59.122 40.000 12.15 0.00 42.32 3.46
2120 2149 5.810095 AGTTTATAGCAAACTGAGCTCCTT 58.190 37.500 12.15 0.00 42.32 3.36
2121 2150 5.428184 AGTTTATAGCAAACTGAGCTCCT 57.572 39.130 12.15 1.97 42.32 3.69
2122 2151 6.342111 AGTAGTTTATAGCAAACTGAGCTCC 58.658 40.000 12.15 0.00 42.32 4.70
2123 2152 7.435784 GGTAGTAGTTTATAGCAAACTGAGCTC 59.564 40.741 6.82 6.82 42.32 4.09
2124 2153 7.093465 TGGTAGTAGTTTATAGCAAACTGAGCT 60.093 37.037 11.62 9.39 45.77 4.09
2125 2154 7.039882 TGGTAGTAGTTTATAGCAAACTGAGC 58.960 38.462 11.62 7.64 40.38 4.26
2126 2155 8.997621 TTGGTAGTAGTTTATAGCAAACTGAG 57.002 34.615 11.62 0.00 40.38 3.35
2127 2156 8.591072 ACTTGGTAGTAGTTTATAGCAAACTGA 58.409 33.333 11.62 0.00 40.38 3.41
2128 2157 8.773404 ACTTGGTAGTAGTTTATAGCAAACTG 57.227 34.615 11.62 0.00 40.38 3.16
2129 2158 8.813951 AGACTTGGTAGTAGTTTATAGCAAACT 58.186 33.333 7.47 7.47 42.53 2.66
2130 2159 8.999220 AGACTTGGTAGTAGTTTATAGCAAAC 57.001 34.615 0.00 0.00 38.50 2.93
2131 2160 8.809066 TGAGACTTGGTAGTAGTTTATAGCAAA 58.191 33.333 0.00 0.00 38.50 3.68
2132 2161 8.357290 TGAGACTTGGTAGTAGTTTATAGCAA 57.643 34.615 0.00 0.00 37.13 3.91
2133 2162 7.949690 TGAGACTTGGTAGTAGTTTATAGCA 57.050 36.000 0.00 0.00 33.84 3.49
2134 2163 9.649167 TTTTGAGACTTGGTAGTAGTTTATAGC 57.351 33.333 0.00 0.00 33.84 2.97
2136 2165 9.933723 GGTTTTGAGACTTGGTAGTAGTTTATA 57.066 33.333 0.00 0.00 33.84 0.98
2137 2166 8.434392 TGGTTTTGAGACTTGGTAGTAGTTTAT 58.566 33.333 0.00 0.00 33.84 1.40
2138 2167 7.794041 TGGTTTTGAGACTTGGTAGTAGTTTA 58.206 34.615 0.00 0.00 33.84 2.01
2139 2168 6.655930 TGGTTTTGAGACTTGGTAGTAGTTT 58.344 36.000 0.00 0.00 33.84 2.66
2140 2169 6.126854 ACTGGTTTTGAGACTTGGTAGTAGTT 60.127 38.462 0.00 0.00 33.84 2.24
2141 2170 5.365895 ACTGGTTTTGAGACTTGGTAGTAGT 59.634 40.000 0.00 0.00 33.84 2.73
2142 2171 5.855045 ACTGGTTTTGAGACTTGGTAGTAG 58.145 41.667 0.00 0.00 33.84 2.57
2143 2172 5.881923 ACTGGTTTTGAGACTTGGTAGTA 57.118 39.130 0.00 0.00 33.84 1.82
2144 2173 4.772886 ACTGGTTTTGAGACTTGGTAGT 57.227 40.909 0.00 0.00 37.31 2.73
2145 2174 7.444183 TGAAATACTGGTTTTGAGACTTGGTAG 59.556 37.037 0.00 0.00 0.00 3.18
2146 2175 7.284074 TGAAATACTGGTTTTGAGACTTGGTA 58.716 34.615 0.00 0.00 0.00 3.25
2147 2176 6.126409 TGAAATACTGGTTTTGAGACTTGGT 58.874 36.000 0.00 0.00 0.00 3.67
2148 2177 6.633500 TGAAATACTGGTTTTGAGACTTGG 57.367 37.500 0.00 0.00 0.00 3.61
2161 2190 4.218200 TGTCATGGCAGTTTGAAATACTGG 59.782 41.667 0.00 0.00 42.53 4.00
2162 2191 5.375417 TGTCATGGCAGTTTGAAATACTG 57.625 39.130 0.00 0.00 44.55 2.74
2163 2192 7.886629 ATATGTCATGGCAGTTTGAAATACT 57.113 32.000 6.04 0.00 27.57 2.12
2222 2978 9.899226 AGAAATAGAACTAAATTGACACTTTGC 57.101 29.630 1.28 0.00 0.00 3.68
2260 3016 8.846211 ACTTACTGCAGAATTAAAAACTAAGCA 58.154 29.630 23.35 0.00 0.00 3.91
2262 3018 9.612620 CCACTTACTGCAGAATTAAAAACTAAG 57.387 33.333 23.35 15.10 0.00 2.18
2269 3025 6.016610 GGTGAACCACTTACTGCAGAATTAAA 60.017 38.462 23.35 5.47 34.40 1.52
2270 3026 5.472137 GGTGAACCACTTACTGCAGAATTAA 59.528 40.000 23.35 7.93 34.40 1.40
2271 3027 5.001232 GGTGAACCACTTACTGCAGAATTA 58.999 41.667 23.35 0.00 34.40 1.40
2277 3033 0.250124 CGGGTGAACCACTTACTGCA 60.250 55.000 1.16 0.00 40.22 4.41
2279 3035 1.616865 TCTCGGGTGAACCACTTACTG 59.383 52.381 1.16 0.00 40.22 2.74
2287 3043 2.491675 AAAGGAATCTCGGGTGAACC 57.508 50.000 0.00 0.00 0.00 3.62
2301 3057 1.460273 GGTCGCTTGGGCAAAAAGGA 61.460 55.000 0.00 0.00 38.60 3.36
2303 3059 0.318955 CAGGTCGCTTGGGCAAAAAG 60.319 55.000 0.00 0.00 38.60 2.27
2304 3060 1.739049 CAGGTCGCTTGGGCAAAAA 59.261 52.632 0.00 0.00 38.60 1.94
2315 3071 0.248134 CGTAGAGTGTAGCAGGTCGC 60.248 60.000 0.00 0.00 42.91 5.19
2316 3072 0.377554 CCGTAGAGTGTAGCAGGTCG 59.622 60.000 0.00 0.00 0.00 4.79
2328 3092 4.751600 TGATTATGAATTGCTGCCGTAGAG 59.248 41.667 0.00 0.00 0.00 2.43
2333 3097 4.036027 ACTTCTGATTATGAATTGCTGCCG 59.964 41.667 0.00 0.00 0.00 5.69
2334 3098 5.511234 ACTTCTGATTATGAATTGCTGCC 57.489 39.130 0.00 0.00 0.00 4.85
2360 3124 7.012989 GCGGTGAACCCTAAATTTCTATGTTAT 59.987 37.037 0.00 0.00 0.00 1.89
2362 3126 5.124936 GCGGTGAACCCTAAATTTCTATGTT 59.875 40.000 0.00 0.00 0.00 2.71
2363 3127 4.638865 GCGGTGAACCCTAAATTTCTATGT 59.361 41.667 0.00 0.00 0.00 2.29
2365 3129 5.112129 AGCGGTGAACCCTAAATTTCTAT 57.888 39.130 0.00 0.00 0.00 1.98
2366 3130 4.563140 AGCGGTGAACCCTAAATTTCTA 57.437 40.909 0.00 0.00 0.00 2.10
2368 3132 4.234574 CAAAGCGGTGAACCCTAAATTTC 58.765 43.478 0.00 0.00 0.00 2.17
2369 3133 3.554129 GCAAAGCGGTGAACCCTAAATTT 60.554 43.478 0.00 0.00 0.00 1.82
2370 3134 2.029380 GCAAAGCGGTGAACCCTAAATT 60.029 45.455 0.00 0.00 0.00 1.82
2373 3137 0.109723 AGCAAAGCGGTGAACCCTAA 59.890 50.000 0.00 0.00 0.00 2.69
2374 3138 0.109723 AAGCAAAGCGGTGAACCCTA 59.890 50.000 0.00 0.00 0.00 3.53
2375 3139 1.152756 AAGCAAAGCGGTGAACCCT 60.153 52.632 0.00 0.00 0.00 4.34
2376 3140 1.285950 GAAGCAAAGCGGTGAACCC 59.714 57.895 0.00 0.00 0.00 4.11
2377 3141 0.598065 ATGAAGCAAAGCGGTGAACC 59.402 50.000 0.00 0.00 0.00 3.62
2378 3142 1.537202 AGATGAAGCAAAGCGGTGAAC 59.463 47.619 0.00 0.00 0.00 3.18
2379 3143 1.896220 AGATGAAGCAAAGCGGTGAA 58.104 45.000 0.00 0.00 0.00 3.18
2380 3144 2.233676 TCTAGATGAAGCAAAGCGGTGA 59.766 45.455 0.00 0.00 0.00 4.02
2381 3145 2.621338 TCTAGATGAAGCAAAGCGGTG 58.379 47.619 0.00 0.00 0.00 4.94
2382 3146 3.334583 TTCTAGATGAAGCAAAGCGGT 57.665 42.857 0.00 0.00 0.00 5.68
2383 3147 4.685169 TTTTCTAGATGAAGCAAAGCGG 57.315 40.909 0.00 0.00 35.89 5.52
2384 3148 6.549952 AGATTTTTCTAGATGAAGCAAAGCG 58.450 36.000 0.00 0.00 35.89 4.68
2385 3149 9.283420 GTAAGATTTTTCTAGATGAAGCAAAGC 57.717 33.333 0.00 0.00 35.89 3.51
2388 3152 9.725019 TGAGTAAGATTTTTCTAGATGAAGCAA 57.275 29.630 0.00 0.00 35.89 3.91
2389 3153 9.155975 GTGAGTAAGATTTTTCTAGATGAAGCA 57.844 33.333 0.00 0.00 35.89 3.91
2390 3154 8.324567 CGTGAGTAAGATTTTTCTAGATGAAGC 58.675 37.037 0.00 0.00 35.89 3.86
2391 3155 8.324567 GCGTGAGTAAGATTTTTCTAGATGAAG 58.675 37.037 0.00 0.00 35.89 3.02
2392 3156 7.277981 GGCGTGAGTAAGATTTTTCTAGATGAA 59.722 37.037 0.00 0.00 0.00 2.57
2393 3157 6.757010 GGCGTGAGTAAGATTTTTCTAGATGA 59.243 38.462 0.00 0.00 0.00 2.92
2394 3158 6.018669 GGGCGTGAGTAAGATTTTTCTAGATG 60.019 42.308 0.00 0.00 0.00 2.90
2395 3159 6.049790 GGGCGTGAGTAAGATTTTTCTAGAT 58.950 40.000 0.00 0.00 0.00 1.98
2396 3160 5.046878 TGGGCGTGAGTAAGATTTTTCTAGA 60.047 40.000 0.00 0.00 0.00 2.43
2397 3161 5.175859 TGGGCGTGAGTAAGATTTTTCTAG 58.824 41.667 0.00 0.00 0.00 2.43
2398 3162 5.155278 TGGGCGTGAGTAAGATTTTTCTA 57.845 39.130 0.00 0.00 0.00 2.10
2399 3163 4.015872 TGGGCGTGAGTAAGATTTTTCT 57.984 40.909 0.00 0.00 0.00 2.52
2400 3164 4.215613 AGTTGGGCGTGAGTAAGATTTTTC 59.784 41.667 0.00 0.00 0.00 2.29
2401 3165 4.142038 AGTTGGGCGTGAGTAAGATTTTT 58.858 39.130 0.00 0.00 0.00 1.94
2402 3166 3.751518 AGTTGGGCGTGAGTAAGATTTT 58.248 40.909 0.00 0.00 0.00 1.82
2403 3167 3.008049 AGAGTTGGGCGTGAGTAAGATTT 59.992 43.478 0.00 0.00 0.00 2.17
2404 3168 2.567615 AGAGTTGGGCGTGAGTAAGATT 59.432 45.455 0.00 0.00 0.00 2.40
2405 3169 2.166664 GAGAGTTGGGCGTGAGTAAGAT 59.833 50.000 0.00 0.00 0.00 2.40
2406 3170 1.544691 GAGAGTTGGGCGTGAGTAAGA 59.455 52.381 0.00 0.00 0.00 2.10
2407 3171 1.546476 AGAGAGTTGGGCGTGAGTAAG 59.454 52.381 0.00 0.00 0.00 2.34
2408 3172 1.544691 GAGAGAGTTGGGCGTGAGTAA 59.455 52.381 0.00 0.00 0.00 2.24
2409 3173 1.174783 GAGAGAGTTGGGCGTGAGTA 58.825 55.000 0.00 0.00 0.00 2.59
2410 3174 0.540830 AGAGAGAGTTGGGCGTGAGT 60.541 55.000 0.00 0.00 0.00 3.41
2411 3175 0.172352 GAGAGAGAGTTGGGCGTGAG 59.828 60.000 0.00 0.00 0.00 3.51
2412 3176 0.251386 AGAGAGAGAGTTGGGCGTGA 60.251 55.000 0.00 0.00 0.00 4.35
2413 3177 0.172352 GAGAGAGAGAGTTGGGCGTG 59.828 60.000 0.00 0.00 0.00 5.34
2414 3178 0.039035 AGAGAGAGAGAGTTGGGCGT 59.961 55.000 0.00 0.00 0.00 5.68
2415 3179 1.181786 AAGAGAGAGAGAGTTGGGCG 58.818 55.000 0.00 0.00 0.00 6.13
2416 3180 2.564947 TGAAAGAGAGAGAGAGTTGGGC 59.435 50.000 0.00 0.00 0.00 5.36
2417 3181 4.085733 TCTGAAAGAGAGAGAGAGTTGGG 58.914 47.826 0.00 0.00 38.67 4.12
2431 3195 3.568007 CGTGGGGTGATTTTTCTGAAAGA 59.432 43.478 2.75 0.00 44.68 2.52
2432 3196 3.857010 GCGTGGGGTGATTTTTCTGAAAG 60.857 47.826 2.75 0.00 0.00 2.62
2433 3197 2.035321 GCGTGGGGTGATTTTTCTGAAA 59.965 45.455 0.00 0.00 0.00 2.69
2434 3198 1.611491 GCGTGGGGTGATTTTTCTGAA 59.389 47.619 0.00 0.00 0.00 3.02
2435 3199 1.243902 GCGTGGGGTGATTTTTCTGA 58.756 50.000 0.00 0.00 0.00 3.27
2436 3200 0.243636 GGCGTGGGGTGATTTTTCTG 59.756 55.000 0.00 0.00 0.00 3.02
2437 3201 0.898326 GGGCGTGGGGTGATTTTTCT 60.898 55.000 0.00 0.00 0.00 2.52
2438 3202 1.589630 GGGCGTGGGGTGATTTTTC 59.410 57.895 0.00 0.00 0.00 2.29
2439 3203 1.911269 GGGGCGTGGGGTGATTTTT 60.911 57.895 0.00 0.00 0.00 1.94
2440 3204 2.283604 GGGGCGTGGGGTGATTTT 60.284 61.111 0.00 0.00 0.00 1.82
2441 3205 4.733542 CGGGGCGTGGGGTGATTT 62.734 66.667 0.00 0.00 0.00 2.17
2454 3218 4.410400 GAGGGAACAGGTGCGGGG 62.410 72.222 0.00 0.00 0.00 5.73
2455 3219 4.410400 GGAGGGAACAGGTGCGGG 62.410 72.222 0.00 0.00 0.00 6.13
2456 3220 3.316573 GAGGAGGGAACAGGTGCGG 62.317 68.421 0.00 0.00 0.00 5.69
2457 3221 2.266055 GAGGAGGGAACAGGTGCG 59.734 66.667 0.00 0.00 0.00 5.34
2458 3222 2.266055 CGAGGAGGGAACAGGTGC 59.734 66.667 0.00 0.00 0.00 5.01
2459 3223 1.293498 CACGAGGAGGGAACAGGTG 59.707 63.158 0.00 0.00 0.00 4.00
2460 3224 2.584391 GCACGAGGAGGGAACAGGT 61.584 63.158 0.00 0.00 0.00 4.00
2461 3225 2.266055 GCACGAGGAGGGAACAGG 59.734 66.667 0.00 0.00 0.00 4.00
2462 3226 2.125912 CGCACGAGGAGGGAACAG 60.126 66.667 0.00 0.00 0.00 3.16
2463 3227 4.373116 GCGCACGAGGAGGGAACA 62.373 66.667 0.30 0.00 0.00 3.18
2481 3245 3.484547 GAGGCGTTAACGGTGGCG 61.485 66.667 27.82 3.29 40.23 5.69
2482 3246 3.122971 GGAGGCGTTAACGGTGGC 61.123 66.667 27.82 13.08 40.23 5.01
2483 3247 1.296056 CTTGGAGGCGTTAACGGTGG 61.296 60.000 27.82 1.95 40.23 4.61
2484 3248 0.320073 TCTTGGAGGCGTTAACGGTG 60.320 55.000 27.82 2.33 40.23 4.94
2485 3249 0.037605 CTCTTGGAGGCGTTAACGGT 60.038 55.000 27.82 0.00 40.23 4.83
2486 3250 0.037605 ACTCTTGGAGGCGTTAACGG 60.038 55.000 27.82 10.58 34.92 4.44
2487 3251 1.347320 GACTCTTGGAGGCGTTAACG 58.653 55.000 23.40 23.40 36.37 3.18
2488 3252 1.001633 TGGACTCTTGGAGGCGTTAAC 59.998 52.381 0.00 0.00 38.87 2.01
2489 3253 1.275291 CTGGACTCTTGGAGGCGTTAA 59.725 52.381 0.00 0.00 38.87 2.01
2490 3254 0.895530 CTGGACTCTTGGAGGCGTTA 59.104 55.000 0.00 0.00 38.87 3.18
2491 3255 1.674057 CTGGACTCTTGGAGGCGTT 59.326 57.895 0.00 0.00 38.87 4.84
2492 3256 2.948720 GCTGGACTCTTGGAGGCGT 61.949 63.158 0.00 0.00 38.87 5.68
2493 3257 2.125350 GCTGGACTCTTGGAGGCG 60.125 66.667 0.00 0.00 38.87 5.52
2494 3258 2.125350 CGCTGGACTCTTGGAGGC 60.125 66.667 0.00 0.00 36.87 4.70
2495 3259 0.390472 GTTCGCTGGACTCTTGGAGG 60.390 60.000 0.00 0.00 33.35 4.30
2496 3260 0.318441 TGTTCGCTGGACTCTTGGAG 59.682 55.000 0.00 0.00 35.52 3.86
2497 3261 0.756294 TTGTTCGCTGGACTCTTGGA 59.244 50.000 0.00 0.00 0.00 3.53
2498 3262 1.264288 GTTTGTTCGCTGGACTCTTGG 59.736 52.381 0.00 0.00 0.00 3.61
2499 3263 1.264288 GGTTTGTTCGCTGGACTCTTG 59.736 52.381 0.00 0.00 0.00 3.02
2500 3264 1.134220 TGGTTTGTTCGCTGGACTCTT 60.134 47.619 0.00 0.00 0.00 2.85
2501 3265 0.468226 TGGTTTGTTCGCTGGACTCT 59.532 50.000 0.00 0.00 0.00 3.24
2502 3266 1.197721 CATGGTTTGTTCGCTGGACTC 59.802 52.381 0.00 0.00 0.00 3.36
2503 3267 1.238439 CATGGTTTGTTCGCTGGACT 58.762 50.000 0.00 0.00 0.00 3.85
2504 3268 0.240945 CCATGGTTTGTTCGCTGGAC 59.759 55.000 2.57 0.00 0.00 4.02
2505 3269 0.109532 TCCATGGTTTGTTCGCTGGA 59.890 50.000 12.58 0.00 0.00 3.86
2506 3270 0.523072 CTCCATGGTTTGTTCGCTGG 59.477 55.000 12.58 0.00 0.00 4.85
2507 3271 0.109597 GCTCCATGGTTTGTTCGCTG 60.110 55.000 12.58 0.00 0.00 5.18
2508 3272 0.537143 TGCTCCATGGTTTGTTCGCT 60.537 50.000 12.58 0.00 0.00 4.93
2509 3273 0.387239 GTGCTCCATGGTTTGTTCGC 60.387 55.000 12.58 5.09 0.00 4.70
2510 3274 0.240945 GGTGCTCCATGGTTTGTTCG 59.759 55.000 12.58 0.00 0.00 3.95
2511 3275 1.327303 TGGTGCTCCATGGTTTGTTC 58.673 50.000 12.58 0.00 39.03 3.18
2512 3276 3.529948 TGGTGCTCCATGGTTTGTT 57.470 47.368 12.58 0.00 39.03 2.83
2523 3287 0.398381 AGGGAGAGGAGATGGTGCTC 60.398 60.000 0.00 0.00 43.95 4.26
2524 3288 0.398381 GAGGGAGAGGAGATGGTGCT 60.398 60.000 0.00 0.00 0.00 4.40
2525 3289 1.406860 GGAGGGAGAGGAGATGGTGC 61.407 65.000 0.00 0.00 0.00 5.01
2526 3290 0.031716 TGGAGGGAGAGGAGATGGTG 60.032 60.000 0.00 0.00 0.00 4.17
2527 3291 0.948050 ATGGAGGGAGAGGAGATGGT 59.052 55.000 0.00 0.00 0.00 3.55
2528 3292 1.149711 AGATGGAGGGAGAGGAGATGG 59.850 57.143 0.00 0.00 0.00 3.51
2529 3293 2.250031 CAGATGGAGGGAGAGGAGATG 58.750 57.143 0.00 0.00 0.00 2.90
2530 3294 1.482930 GCAGATGGAGGGAGAGGAGAT 60.483 57.143 0.00 0.00 0.00 2.75
2531 3295 0.105760 GCAGATGGAGGGAGAGGAGA 60.106 60.000 0.00 0.00 0.00 3.71
2532 3296 1.462731 CGCAGATGGAGGGAGAGGAG 61.463 65.000 0.00 0.00 0.00 3.69
2533 3297 1.456518 CGCAGATGGAGGGAGAGGA 60.457 63.158 0.00 0.00 0.00 3.71
2534 3298 2.506061 CCGCAGATGGAGGGAGAGG 61.506 68.421 0.00 0.00 31.91 3.69
2535 3299 3.136750 CCGCAGATGGAGGGAGAG 58.863 66.667 0.00 0.00 31.91 3.20
2536 3300 3.157252 GCCGCAGATGGAGGGAGA 61.157 66.667 0.00 0.00 36.88 3.71
2537 3301 3.160047 AGCCGCAGATGGAGGGAG 61.160 66.667 0.00 0.00 36.88 4.30
2538 3302 3.157252 GAGCCGCAGATGGAGGGA 61.157 66.667 0.00 0.00 36.88 4.20
2539 3303 3.160047 AGAGCCGCAGATGGAGGG 61.160 66.667 0.00 0.00 36.88 4.30
2540 3304 2.086251 GAGAGAGCCGCAGATGGAGG 62.086 65.000 0.00 0.00 39.87 4.30
2541 3305 1.363443 GAGAGAGCCGCAGATGGAG 59.637 63.158 0.00 0.00 0.00 3.86
2542 3306 2.130426 GGAGAGAGCCGCAGATGGA 61.130 63.158 0.00 0.00 0.00 3.41
2543 3307 2.420890 GGAGAGAGCCGCAGATGG 59.579 66.667 0.00 0.00 0.00 3.51
2544 3308 2.132996 AGGGAGAGAGCCGCAGATG 61.133 63.158 0.00 0.00 0.00 2.90
2545 3309 2.132996 CAGGGAGAGAGCCGCAGAT 61.133 63.158 0.00 0.00 0.00 2.90
2546 3310 2.757508 CAGGGAGAGAGCCGCAGA 60.758 66.667 0.00 0.00 0.00 4.26
2547 3311 2.570582 GAACAGGGAGAGAGCCGCAG 62.571 65.000 0.00 0.00 0.00 5.18
2548 3312 2.604686 AACAGGGAGAGAGCCGCA 60.605 61.111 0.00 0.00 0.00 5.69
2549 3313 2.185608 GAACAGGGAGAGAGCCGC 59.814 66.667 0.00 0.00 0.00 6.53
2550 3314 1.671901 GAGGAACAGGGAGAGAGCCG 61.672 65.000 0.00 0.00 0.00 5.52
2551 3315 1.334384 GGAGGAACAGGGAGAGAGCC 61.334 65.000 0.00 0.00 0.00 4.70
2552 3316 0.616111 TGGAGGAACAGGGAGAGAGC 60.616 60.000 0.00 0.00 0.00 4.09
2553 3317 1.190643 GTGGAGGAACAGGGAGAGAG 58.809 60.000 0.00 0.00 0.00 3.20
2554 3318 0.787084 AGTGGAGGAACAGGGAGAGA 59.213 55.000 0.00 0.00 0.00 3.10
2555 3319 1.190643 GAGTGGAGGAACAGGGAGAG 58.809 60.000 0.00 0.00 0.00 3.20
2556 3320 0.252284 GGAGTGGAGGAACAGGGAGA 60.252 60.000 0.00 0.00 0.00 3.71
2557 3321 0.252467 AGGAGTGGAGGAACAGGGAG 60.252 60.000 0.00 0.00 0.00 4.30
2558 3322 0.252284 GAGGAGTGGAGGAACAGGGA 60.252 60.000 0.00 0.00 0.00 4.20
2559 3323 0.252467 AGAGGAGTGGAGGAACAGGG 60.252 60.000 0.00 0.00 0.00 4.45
2560 3324 1.650528 AAGAGGAGTGGAGGAACAGG 58.349 55.000 0.00 0.00 0.00 4.00
2561 3325 2.903135 AGAAAGAGGAGTGGAGGAACAG 59.097 50.000 0.00 0.00 0.00 3.16
2562 3326 2.900546 GAGAAAGAGGAGTGGAGGAACA 59.099 50.000 0.00 0.00 0.00 3.18
2563 3327 2.235155 GGAGAAAGAGGAGTGGAGGAAC 59.765 54.545 0.00 0.00 0.00 3.62
2564 3328 2.541466 GGAGAAAGAGGAGTGGAGGAA 58.459 52.381 0.00 0.00 0.00 3.36
2565 3329 1.273324 GGGAGAAAGAGGAGTGGAGGA 60.273 57.143 0.00 0.00 0.00 3.71
2566 3330 1.199615 GGGAGAAAGAGGAGTGGAGG 58.800 60.000 0.00 0.00 0.00 4.30
2567 3331 2.107366 GAGGGAGAAAGAGGAGTGGAG 58.893 57.143 0.00 0.00 0.00 3.86
2568 3332 1.617263 CGAGGGAGAAAGAGGAGTGGA 60.617 57.143 0.00 0.00 0.00 4.02
2569 3333 0.820871 CGAGGGAGAAAGAGGAGTGG 59.179 60.000 0.00 0.00 0.00 4.00
2570 3334 0.820871 CCGAGGGAGAAAGAGGAGTG 59.179 60.000 0.00 0.00 0.00 3.51
2571 3335 0.705253 TCCGAGGGAGAAAGAGGAGT 59.295 55.000 0.00 0.00 0.00 3.85
2572 3336 1.960689 GATCCGAGGGAGAAAGAGGAG 59.039 57.143 0.00 0.00 34.05 3.69
2573 3337 1.751032 CGATCCGAGGGAGAAAGAGGA 60.751 57.143 0.00 0.00 34.05 3.71
2574 3338 0.671251 CGATCCGAGGGAGAAAGAGG 59.329 60.000 0.00 0.00 34.05 3.69
2575 3339 1.681538 TCGATCCGAGGGAGAAAGAG 58.318 55.000 0.00 0.00 34.05 2.85
2576 3340 3.896854 TCGATCCGAGGGAGAAAGA 57.103 52.632 0.00 0.00 34.05 2.52
2588 3352 4.899239 CCAGGCCACGCTCGATCC 62.899 72.222 5.01 0.00 0.00 3.36
2589 3353 3.371097 TTCCAGGCCACGCTCGATC 62.371 63.158 5.01 0.00 0.00 3.69
2590 3354 3.376935 CTTCCAGGCCACGCTCGAT 62.377 63.158 5.01 0.00 0.00 3.59
2591 3355 4.069232 CTTCCAGGCCACGCTCGA 62.069 66.667 5.01 0.00 0.00 4.04
2592 3356 3.589654 TTCTTCCAGGCCACGCTCG 62.590 63.158 5.01 0.00 0.00 5.03
2593 3357 1.743252 CTTCTTCCAGGCCACGCTC 60.743 63.158 5.01 0.00 0.00 5.03
2594 3358 2.348998 CTTCTTCCAGGCCACGCT 59.651 61.111 5.01 0.00 0.00 5.07
2595 3359 2.747855 CCTTCTTCCAGGCCACGC 60.748 66.667 5.01 0.00 0.00 5.34
2596 3360 2.045926 CCCTTCTTCCAGGCCACG 60.046 66.667 5.01 0.00 31.69 4.94
2597 3361 0.609406 GAACCCTTCTTCCAGGCCAC 60.609 60.000 5.01 0.00 31.69 5.01
2598 3362 1.767692 GAACCCTTCTTCCAGGCCA 59.232 57.895 5.01 0.00 31.69 5.36
2599 3363 1.000771 GGAACCCTTCTTCCAGGCC 60.001 63.158 0.00 0.00 39.78 5.19
2600 3364 1.767692 TGGAACCCTTCTTCCAGGC 59.232 57.895 0.00 0.00 44.05 4.85
2603 3367 1.705186 CCTTCTGGAACCCTTCTTCCA 59.295 52.381 0.86 0.86 46.27 3.53
2604 3368 1.004862 CCCTTCTGGAACCCTTCTTCC 59.995 57.143 0.00 0.00 40.36 3.46
2605 3369 1.614583 GCCCTTCTGGAACCCTTCTTC 60.615 57.143 0.00 0.00 35.39 2.87
2606 3370 0.405973 GCCCTTCTGGAACCCTTCTT 59.594 55.000 0.00 0.00 35.39 2.52
2608 3372 1.000771 GGCCCTTCTGGAACCCTTC 60.001 63.158 0.00 0.00 35.39 3.46
2610 3374 3.330720 CGGCCCTTCTGGAACCCT 61.331 66.667 0.00 0.00 35.39 4.34
2611 3375 4.426313 CCGGCCCTTCTGGAACCC 62.426 72.222 0.00 0.00 44.37 4.11
2613 3377 4.344865 TGCCGGCCCTTCTGGAAC 62.345 66.667 26.77 0.00 44.37 3.62
2635 3399 2.787249 CTTTCTGGCACGCATCCG 59.213 61.111 0.00 0.00 41.14 4.18
2636 3400 2.486966 GCTTTCTGGCACGCATCC 59.513 61.111 0.00 0.00 0.00 3.51
2638 3402 2.669569 ACGCTTTCTGGCACGCAT 60.670 55.556 0.00 0.00 0.00 4.73
2639 3403 3.345808 GACGCTTTCTGGCACGCA 61.346 61.111 0.00 0.00 0.00 5.24
2640 3404 4.430423 CGACGCTTTCTGGCACGC 62.430 66.667 0.00 0.00 0.00 5.34
2641 3405 4.430423 GCGACGCTTTCTGGCACG 62.430 66.667 13.73 0.00 35.83 5.34
2642 3406 4.090057 GGCGACGCTTTCTGGCAC 62.090 66.667 20.77 0.00 0.00 5.01
2644 3408 3.491652 GAGGCGACGCTTTCTGGC 61.492 66.667 20.77 0.32 0.00 4.85
2645 3409 2.097038 CAGAGGCGACGCTTTCTGG 61.097 63.158 30.16 19.30 39.02 3.86
2648 3412 2.815647 CCCAGAGGCGACGCTTTC 60.816 66.667 20.77 16.97 39.02 2.62
2728 3492 4.197498 AAGCATCAATGGCGCGGC 62.197 61.111 27.61 27.61 36.08 6.53
2729 3493 2.278336 CAAGCATCAATGGCGCGG 60.278 61.111 8.83 0.00 36.08 6.46
2731 3495 2.162754 GTGCAAGCATCAATGGCGC 61.163 57.895 0.00 0.00 36.08 6.53
2732 3496 1.870458 CGTGCAAGCATCAATGGCG 60.870 57.895 0.00 0.00 36.08 5.69
2733 3497 1.517694 CCGTGCAAGCATCAATGGC 60.518 57.895 0.00 0.00 0.00 4.40
2734 3498 0.457166 CACCGTGCAAGCATCAATGG 60.457 55.000 0.00 0.00 0.00 3.16
2735 3499 0.457166 CCACCGTGCAAGCATCAATG 60.457 55.000 0.00 0.00 0.00 2.82
2736 3500 0.608856 TCCACCGTGCAAGCATCAAT 60.609 50.000 0.00 0.00 0.00 2.57
2738 3502 1.672030 CTCCACCGTGCAAGCATCA 60.672 57.895 0.00 0.00 0.00 3.07
2739 3503 2.401766 CCTCCACCGTGCAAGCATC 61.402 63.158 0.00 0.00 0.00 3.91
2741 3505 4.641645 CCCTCCACCGTGCAAGCA 62.642 66.667 0.00 0.00 0.00 3.91
2747 3511 4.838152 CCATCGCCCTCCACCGTG 62.838 72.222 0.00 0.00 0.00 4.94
2750 3514 4.115199 AAGCCATCGCCCTCCACC 62.115 66.667 0.00 0.00 34.57 4.61
2751 3515 2.514824 GAAGCCATCGCCCTCCAC 60.515 66.667 0.00 0.00 34.57 4.02
2752 3516 3.797353 GGAAGCCATCGCCCTCCA 61.797 66.667 0.00 0.00 37.42 3.86
2805 3609 4.344865 AAAGCGACGCCCCCATGT 62.345 61.111 17.79 0.00 0.00 3.21
2806 3610 3.508840 GAAAGCGACGCCCCCATG 61.509 66.667 17.79 0.00 0.00 3.66
2807 3611 3.268103 AAGAAAGCGACGCCCCCAT 62.268 57.895 17.79 0.00 0.00 4.00
2808 3612 3.894547 GAAGAAAGCGACGCCCCCA 62.895 63.158 17.79 0.00 0.00 4.96
2810 3614 3.488090 CGAAGAAAGCGACGCCCC 61.488 66.667 17.79 5.89 0.00 5.80
2811 3615 2.431942 TCGAAGAAAGCGACGCCC 60.432 61.111 17.79 6.29 32.09 6.13
2812 3616 2.770259 GTCGAAGAAAGCGACGCC 59.230 61.111 17.79 0.58 46.85 5.68
2816 3620 4.261888 GCTGGTCGAAGAAAGCGA 57.738 55.556 0.00 0.00 38.44 4.93
2818 3622 1.869690 GGTGCTGGTCGAAGAAAGC 59.130 57.895 0.00 0.00 45.39 3.51
2819 3623 1.291877 CCGGTGCTGGTCGAAGAAAG 61.292 60.000 0.00 0.00 39.69 2.62
2820 3624 1.301401 CCGGTGCTGGTCGAAGAAA 60.301 57.895 0.00 0.00 39.69 2.52
2821 3625 2.342279 CCGGTGCTGGTCGAAGAA 59.658 61.111 0.00 0.00 39.69 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.