Multiple sequence alignment - TraesCS1B01G124900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G124900 chr1B 100.000 6748 0 0 752 7499 151473902 151467155 0.000000e+00 12462.0
1 TraesCS1B01G124900 chr1B 100.000 395 0 0 1 395 151474653 151474259 0.000000e+00 730.0
2 TraesCS1B01G124900 chr1B 93.143 175 10 2 7247 7419 662240310 662240136 9.660000e-64 255.0
3 TraesCS1B01G124900 chr1B 80.370 270 31 13 7162 7412 430884449 430884715 1.280000e-42 185.0
4 TraesCS1B01G124900 chr1B 89.552 67 5 1 6922 6988 439872845 439872781 4.820000e-12 84.2
5 TraesCS1B01G124900 chr1B 91.304 46 3 1 6957 7001 661932553 661932508 2.260000e-05 62.1
6 TraesCS1B01G124900 chr1D 93.161 5308 251 48 1678 6923 100327175 100321918 0.000000e+00 7688.0
7 TraesCS1B01G124900 chr1D 92.434 793 44 7 752 1534 100327956 100327170 0.000000e+00 1118.0
8 TraesCS1B01G124900 chr1D 80.682 264 31 11 7170 7413 471123527 471123264 3.570000e-43 187.0
9 TraesCS1B01G124900 chr1D 93.220 118 8 0 7053 7170 100321784 100321667 2.780000e-39 174.0
10 TraesCS1B01G124900 chr1D 92.771 83 6 0 7417 7499 100321662 100321580 3.680000e-23 121.0
11 TraesCS1B01G124900 chr1A 92.827 3736 165 41 3228 6937 95858287 95854629 0.000000e+00 5319.0
12 TraesCS1B01G124900 chr1A 91.683 1996 104 29 799 2750 95861007 95859030 0.000000e+00 2710.0
13 TraesCS1B01G124900 chr1A 92.308 507 34 4 2742 3245 95858867 95858363 0.000000e+00 715.0
14 TraesCS1B01G124900 chr1A 84.691 405 40 8 2 394 95864053 95863659 1.180000e-102 385.0
15 TraesCS1B01G124900 chr1A 93.839 211 8 4 6964 7174 95854472 95854267 5.650000e-81 313.0
16 TraesCS1B01G124900 chr1A 87.313 268 13 7 7171 7418 447114613 447114347 3.420000e-73 287.0
17 TraesCS1B01G124900 chr1A 87.405 262 13 6 7172 7413 62255713 62255974 4.430000e-72 283.0
18 TraesCS1B01G124900 chr1A 94.030 67 4 0 7433 7499 95854259 95854193 1.330000e-17 102.0
19 TraesCS1B01G124900 chr3B 91.770 243 18 2 7171 7412 367385999 367385758 3.350000e-88 337.0
20 TraesCS1B01G124900 chr3B 80.952 273 30 10 7168 7420 803660333 803660063 5.940000e-46 196.0
21 TraesCS1B01G124900 chr3B 81.102 254 34 12 7171 7413 749149378 749149628 2.760000e-44 191.0
22 TraesCS1B01G124900 chr3B 89.922 129 11 2 3047 3174 284405064 284405191 1.670000e-36 165.0
23 TraesCS1B01G124900 chr3B 92.683 41 3 0 6957 6997 401581444 401581404 8.130000e-05 60.2
24 TraesCS1B01G124900 chr5A 87.594 266 13 7 7171 7416 585159274 585159009 2.650000e-74 291.0
25 TraesCS1B01G124900 chr5A 88.372 129 14 1 3047 3174 244757944 244758072 3.620000e-33 154.0
26 TraesCS1B01G124900 chr5A 93.939 66 4 0 6922 6987 552964379 552964314 4.790000e-17 100.0
27 TraesCS1B01G124900 chr5B 86.891 267 15 9 7171 7417 42984399 42984665 1.590000e-71 281.0
28 TraesCS1B01G124900 chr5B 86.347 271 17 6 7168 7418 246936554 246936284 2.060000e-70 278.0
29 TraesCS1B01G124900 chr5B 79.167 264 34 6 7171 7413 313076061 313076324 6.020000e-36 163.0
30 TraesCS1B01G124900 chr5B 93.333 45 1 2 6911 6955 101808669 101808711 1.750000e-06 65.8
31 TraesCS1B01G124900 chr4B 87.023 262 14 6 7171 7412 519387669 519387930 2.060000e-70 278.0
32 TraesCS1B01G124900 chr4B 86.029 272 17 13 7171 7422 286183287 286183017 9.590000e-69 272.0
33 TraesCS1B01G124900 chr4B 76.243 362 69 8 24 368 546031529 546031168 7.730000e-40 176.0
34 TraesCS1B01G124900 chr4B 86.131 137 17 2 3047 3182 302859122 302858987 6.060000e-31 147.0
35 TraesCS1B01G124900 chr3A 86.792 265 15 6 7172 7416 522717637 522717901 2.060000e-70 278.0
36 TraesCS1B01G124900 chr3A 89.147 129 13 1 3047 3174 466795853 466795725 7.790000e-35 159.0
37 TraesCS1B01G124900 chr3A 89.796 49 2 2 6908 6955 683351654 683351608 8.130000e-05 60.2
38 TraesCS1B01G124900 chr3D 89.372 207 11 6 6679 6883 518986001 518986198 4.490000e-62 250.0
39 TraesCS1B01G124900 chr3D 97.143 35 1 0 6957 6991 67676251 67676217 8.130000e-05 60.2
40 TraesCS1B01G124900 chr6B 82.900 269 23 15 7167 7413 720181911 720181644 3.520000e-53 220.0
41 TraesCS1B01G124900 chr6B 87.500 128 14 2 3047 3173 44661238 44661364 6.060000e-31 147.0
42 TraesCS1B01G124900 chr5D 81.752 274 27 12 7159 7412 447307660 447307390 2.740000e-49 207.0
43 TraesCS1B01G124900 chr5D 93.333 45 1 2 6911 6955 94346222 94346264 1.750000e-06 65.8
44 TraesCS1B01G124900 chr4A 80.608 263 25 14 7171 7413 378535942 378535686 5.980000e-41 180.0
45 TraesCS1B01G124900 chr6D 88.372 129 13 2 3047 3174 249987083 249987210 3.620000e-33 154.0
46 TraesCS1B01G124900 chr2D 87.879 132 13 3 3047 3176 81301566 81301696 1.300000e-32 152.0
47 TraesCS1B01G124900 chr7A 75.769 260 40 18 7171 7409 227566067 227566324 7.960000e-20 110.0
48 TraesCS1B01G124900 chr2A 88.158 76 4 3 6914 6988 585135427 585135356 1.340000e-12 86.1
49 TraesCS1B01G124900 chr2A 89.552 67 4 1 6922 6988 585135356 585135419 1.730000e-11 82.4
50 TraesCS1B01G124900 chr2A 90.244 41 4 0 6957 6997 310247253 310247213 4.000000e-03 54.7
51 TraesCS1B01G124900 chr6A 90.196 51 3 1 6922 6970 191221941 191221991 1.750000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G124900 chr1B 151467155 151474653 7498 True 6596.000000 12462 100.0000 1 7499 2 chr1B.!!$R4 7498
1 TraesCS1B01G124900 chr1D 100321580 100327956 6376 True 2275.250000 7688 92.8965 752 7499 4 chr1D.!!$R2 6747
2 TraesCS1B01G124900 chr1A 95854193 95864053 9860 True 1590.666667 5319 91.5630 2 7499 6 chr1A.!!$R2 7497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.113776 AAGTCGTCTACCAGGGACCA 59.886 55.0 0.00 0.00 0.00 4.02 F
54 55 0.333652 TCGTCTACCAGGGACCATCA 59.666 55.0 0.00 0.00 0.00 3.07 F
1945 4235 0.038159 CCGCCATTATCGAGGGAGAC 60.038 60.0 0.00 0.00 0.00 3.36 F
1972 4262 0.468226 GTGGGACCTGTGTGAACAGA 59.532 55.0 7.43 0.00 39.99 3.41 F
2889 5382 1.167851 TGATTGCTGAAGGAAAGCCG 58.832 50.0 0.00 0.00 40.06 5.52 F
4227 6855 0.109153 ACTGGCATGCAGAACTCACA 59.891 50.0 21.36 4.37 0.00 3.58 F
6088 8721 0.179045 CCATTGCCCTAGGAACTCGG 60.179 60.0 11.48 0.88 41.49 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1563 3843 0.106268 TCCACCCATTTGTGCACACT 60.106 50.000 21.56 7.21 34.85 3.55 R
1972 4262 0.535102 CTTTGGACGGAACACAGCCT 60.535 55.000 0.00 0.00 0.00 4.58 R
2785 5278 1.279271 AGCGACCTTTTATGTCAGGCT 59.721 47.619 0.00 0.00 32.79 4.58 R
3039 5535 1.475751 CCCTGTCCATGCTATCACCAC 60.476 57.143 0.00 0.00 0.00 4.16 R
4293 6921 1.667724 GCATACACCTGTAAGCAGCAG 59.332 52.381 7.60 0.00 42.70 4.24 R
6172 8807 0.396811 AGCTTAAGTTCCTGCGTGGT 59.603 50.000 4.02 0.00 37.07 4.16 R
6971 9611 1.120530 AATTACTCGCTCCGTCCCAT 58.879 50.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.148000 CCATTTTCATTGTTCGACAAACGG 59.852 41.667 4.87 0.19 41.96 4.44
29 30 2.242047 TGTTCGACAAACGGAATGGA 57.758 45.000 0.00 0.00 41.02 3.41
36 37 2.225727 GACAAACGGAATGGACCAAGTC 59.774 50.000 0.00 0.00 0.00 3.01
51 52 0.113776 AAGTCGTCTACCAGGGACCA 59.886 55.000 0.00 0.00 0.00 4.02
53 54 0.745468 GTCGTCTACCAGGGACCATC 59.255 60.000 0.00 0.00 0.00 3.51
54 55 0.333652 TCGTCTACCAGGGACCATCA 59.666 55.000 0.00 0.00 0.00 3.07
65 75 1.406539 GGGACCATCATCACACATTGC 59.593 52.381 0.00 0.00 0.00 3.56
93 104 3.508793 CAGTGACCATTGAAAGGAGCAAT 59.491 43.478 0.00 0.00 36.45 3.56
123 134 4.198530 CCCAATCCCAACCAAATTATTGC 58.801 43.478 0.00 0.00 35.10 3.56
126 137 5.358922 CAATCCCAACCAAATTATTGCGAT 58.641 37.500 0.00 0.00 35.10 4.58
128 139 5.766150 TCCCAACCAAATTATTGCGATAG 57.234 39.130 0.00 0.00 35.10 2.08
141 152 3.733236 CGATAGCCAACACCGAGAA 57.267 52.632 0.00 0.00 0.00 2.87
158 169 9.287373 ACACCGAGAAAATAAACCATACTAAAA 57.713 29.630 0.00 0.00 0.00 1.52
170 181 4.224370 ACCATACTAAAACCATCGTCACCT 59.776 41.667 0.00 0.00 0.00 4.00
172 183 6.070653 ACCATACTAAAACCATCGTCACCTAA 60.071 38.462 0.00 0.00 0.00 2.69
173 184 6.257193 CCATACTAAAACCATCGTCACCTAAC 59.743 42.308 0.00 0.00 0.00 2.34
174 185 5.217978 ACTAAAACCATCGTCACCTAACA 57.782 39.130 0.00 0.00 0.00 2.41
175 186 5.613329 ACTAAAACCATCGTCACCTAACAA 58.387 37.500 0.00 0.00 0.00 2.83
176 187 5.699458 ACTAAAACCATCGTCACCTAACAAG 59.301 40.000 0.00 0.00 0.00 3.16
177 188 4.345859 AAACCATCGTCACCTAACAAGA 57.654 40.909 0.00 0.00 0.00 3.02
178 189 3.314541 ACCATCGTCACCTAACAAGAC 57.685 47.619 0.00 0.00 0.00 3.01
192 203 3.626028 ACAAGACGATCAAAGGCAAAC 57.374 42.857 0.00 0.00 0.00 2.93
199 210 2.061028 GATCAAAGGCAAACCAAAGCG 58.939 47.619 0.00 0.00 39.06 4.68
200 211 0.529555 TCAAAGGCAAACCAAAGCGC 60.530 50.000 0.00 0.00 39.06 5.92
202 213 0.530431 AAAGGCAAACCAAAGCGCAG 60.530 50.000 11.47 0.00 39.06 5.18
204 215 1.181098 AGGCAAACCAAAGCGCAGAT 61.181 50.000 11.47 0.00 39.06 2.90
233 244 3.130160 CTGGGCAAGAGAAGGCGC 61.130 66.667 0.00 0.00 42.61 6.53
237 248 2.563427 GCAAGAGAAGGCGCCAAC 59.437 61.111 31.54 21.55 0.00 3.77
280 291 6.465439 ATCACATATTTGTGGTCGAGACTA 57.535 37.500 15.13 0.00 43.90 2.59
288 299 1.135344 GTGGTCGAGACTAGTGCCTTC 60.135 57.143 0.00 0.00 0.00 3.46
292 303 2.685897 GTCGAGACTAGTGCCTTCAGAT 59.314 50.000 0.00 0.00 0.00 2.90
301 312 2.040278 AGTGCCTTCAGATAAAGTGCCA 59.960 45.455 0.00 0.00 0.00 4.92
351 362 2.356278 GCCCTGTCCATTGCCTCA 59.644 61.111 0.00 0.00 0.00 3.86
354 365 1.003355 CCTGTCCATTGCCTCACGT 60.003 57.895 0.00 0.00 0.00 4.49
357 368 1.965930 GTCCATTGCCTCACGTGCA 60.966 57.895 11.67 2.09 36.84 4.57
362 373 1.518056 ATTGCCTCACGTGCAGGTTG 61.518 55.000 25.16 5.86 40.35 3.77
368 379 1.087202 TCACGTGCAGGTTGTGTGAC 61.087 55.000 11.67 0.00 34.85 3.67
372 383 2.194597 GCAGGTTGTGTGACCCCA 59.805 61.111 0.00 0.00 40.73 4.96
388 401 1.315257 CCCAGGGTGCTACACATTGC 61.315 60.000 0.00 0.00 35.86 3.56
389 402 1.315257 CCAGGGTGCTACACATTGCC 61.315 60.000 0.00 0.00 35.86 4.52
394 407 0.591170 GTGCTACACATTGCCGTTGT 59.409 50.000 0.00 0.00 34.08 3.32
773 3043 4.747810 AGTGCCTTGTTTTTCTTGTCAAG 58.252 39.130 6.21 6.21 37.57 3.02
806 3076 2.476854 CCGTAACTACCTACACTGACGC 60.477 54.545 0.00 0.00 0.00 5.19
1266 3537 2.023414 TAATCATCGGAGCCGGCGTT 62.023 55.000 23.20 3.63 40.25 4.84
1278 3549 4.922026 GGCGTTGGTGGTCACGGT 62.922 66.667 0.00 0.00 0.00 4.83
1314 3585 2.267324 GAGGAGGTCAGTGCTGCC 59.733 66.667 0.00 0.06 0.00 4.85
1340 3617 6.974048 TGTGTTCATGATTTTCTGTCAACTTG 59.026 34.615 0.00 0.00 0.00 3.16
1350 3627 7.539712 TTTTCTGTCAACTTGTCAGAGTTAG 57.460 36.000 15.40 0.00 41.88 2.34
1384 3661 6.876257 ACTTTTCATACTCTGCTGGAACTTAG 59.124 38.462 0.00 0.00 0.00 2.18
1385 3662 6.360370 TTTCATACTCTGCTGGAACTTAGT 57.640 37.500 0.00 0.00 0.00 2.24
1402 3679 9.290483 GGAACTTAGTATTTAATTTGCAAGCTC 57.710 33.333 0.00 0.00 0.00 4.09
1414 3691 1.271217 TGCAAGCTCTGATCAGCAACT 60.271 47.619 18.36 11.46 42.40 3.16
1419 3696 1.610102 GCTCTGATCAGCAACTGGTGT 60.610 52.381 18.36 0.00 43.46 4.16
1429 3706 2.230664 AACTGGTGTTGGAGCTGGA 58.769 52.632 0.00 0.00 34.71 3.86
1434 3711 2.629617 CTGGTGTTGGAGCTGGAAATTT 59.370 45.455 0.00 0.00 0.00 1.82
1440 3717 4.874966 TGTTGGAGCTGGAAATTTTGTTTG 59.125 37.500 0.00 0.00 0.00 2.93
1443 3720 5.115480 TGGAGCTGGAAATTTTGTTTGAAC 58.885 37.500 0.00 0.00 0.00 3.18
1472 3752 5.643348 TGTTGATGTTTATGTTCTGCTCGAT 59.357 36.000 0.00 0.00 0.00 3.59
1500 3780 3.721706 AGTAGCTGCAGTGCCCCC 61.722 66.667 16.64 0.30 0.00 5.40
1603 3883 7.654520 GGTGGAATGTATAATTAGCGACTTACA 59.345 37.037 0.00 0.00 0.00 2.41
1619 3899 7.172532 AGCGACTTACACACTTGAAATAAATGA 59.827 33.333 0.00 0.00 0.00 2.57
1783 4072 5.880901 ACCGAGAAATAGAATTATGCCCAT 58.119 37.500 0.00 0.00 0.00 4.00
1802 4091 5.221322 GCCCATCTTTTTGTTCTGAACTTCT 60.221 40.000 20.18 0.00 0.00 2.85
1874 4163 4.331168 GTCTGACATTGCTTCCATCACTAC 59.669 45.833 2.24 0.00 0.00 2.73
1945 4235 0.038159 CCGCCATTATCGAGGGAGAC 60.038 60.000 0.00 0.00 0.00 3.36
1972 4262 0.468226 GTGGGACCTGTGTGAACAGA 59.532 55.000 7.43 0.00 39.99 3.41
2077 4367 2.138320 CTGCAGGTATAACTGGATGCG 58.862 52.381 19.33 1.32 38.17 4.73
2093 4383 2.416680 TGCGATGATGATGGGTTGAA 57.583 45.000 0.00 0.00 0.00 2.69
2121 4411 7.817962 ACAGGTCATAGAATGTGTTACAACTAC 59.182 37.037 0.00 0.00 29.28 2.73
2126 4425 7.821846 TCATAGAATGTGTTACAACTACATGCA 59.178 33.333 13.46 0.00 32.80 3.96
2127 4426 8.615211 CATAGAATGTGTTACAACTACATGCAT 58.385 33.333 0.00 0.00 32.80 3.96
2129 4428 8.737168 AGAATGTGTTACAACTACATGCATAT 57.263 30.769 0.00 0.00 32.80 1.78
2135 4434 8.064222 GTGTTACAACTACATGCATATTGCTAG 58.936 37.037 0.00 0.00 45.31 3.42
2147 4446 4.323028 GCATATTGCTAGGCATCAGGAGTA 60.323 45.833 0.00 0.00 40.96 2.59
2203 4504 6.763610 ACAGTAAGCATAGGAAGATAAACAGC 59.236 38.462 0.00 0.00 0.00 4.40
2204 4505 5.986135 AGTAAGCATAGGAAGATAAACAGCG 59.014 40.000 0.00 0.00 0.00 5.18
2208 4509 4.570772 GCATAGGAAGATAAACAGCGTGAA 59.429 41.667 0.00 0.00 0.00 3.18
2215 4516 6.128282 GGAAGATAAACAGCGTGAATTTCAGA 60.128 38.462 0.00 0.00 0.00 3.27
2226 4527 4.618489 CGTGAATTTCAGAATGCCTGTTTC 59.382 41.667 0.00 0.00 43.38 2.78
2241 4542 4.641396 CCTGTTTCACACTTACCTCATGA 58.359 43.478 0.00 0.00 0.00 3.07
2252 4553 5.986135 CACTTACCTCATGAAGTGTATAGCC 59.014 44.000 14.55 0.00 44.90 3.93
2360 4664 6.279513 TGTTTAGTTTGCCCTTTATCATGG 57.720 37.500 0.00 0.00 0.00 3.66
2361 4665 6.013379 TGTTTAGTTTGCCCTTTATCATGGA 58.987 36.000 0.00 0.00 0.00 3.41
2362 4666 6.152661 TGTTTAGTTTGCCCTTTATCATGGAG 59.847 38.462 0.00 0.00 0.00 3.86
2379 4700 5.251932 TCATGGAGGGAGTACATTTTACCAA 59.748 40.000 0.00 0.00 0.00 3.67
2391 4712 9.953565 AGTACATTTTACCAAAAGTATGCTCTA 57.046 29.630 0.00 0.00 33.22 2.43
2413 4734 8.630054 TCTATACTTGCAAGTTACAACCATTT 57.370 30.769 35.20 10.02 40.37 2.32
2468 4789 5.163488 CCATGTTACATCATTTGTCCTGCAT 60.163 40.000 0.00 0.00 39.87 3.96
2500 4821 4.944962 TCGTTGAACATATTCTGGCTTG 57.055 40.909 0.00 0.00 35.69 4.01
2573 4894 5.525012 GCAAATAATCTTGCCTCCAAAATCC 59.475 40.000 0.00 0.00 44.88 3.01
2665 4986 9.561069 GTGGTATGTCCTCTGTAAATCATTTAT 57.439 33.333 0.00 0.00 37.07 1.40
2730 5052 8.581253 AATTCTAGCAACCTTTGTAAGCTAAT 57.419 30.769 0.00 0.00 37.60 1.73
2735 5057 7.379098 AGCAACCTTTGTAAGCTAATACTTC 57.621 36.000 0.00 0.00 35.11 3.01
2737 5059 7.665974 AGCAACCTTTGTAAGCTAATACTTCTT 59.334 33.333 0.00 0.00 35.11 2.52
2802 5295 5.221244 ACAAACAAGCCTGACATAAAAGGTC 60.221 40.000 0.00 0.00 35.86 3.85
2804 5297 1.739067 AGCCTGACATAAAAGGTCGC 58.261 50.000 0.00 0.00 38.10 5.19
2809 5302 3.325870 CTGACATAAAAGGTCGCTGACA 58.674 45.455 10.14 0.00 38.10 3.58
2836 5329 9.056005 GTATCTGGAAATGTATTTGCATGTCTA 57.944 33.333 11.15 0.98 44.99 2.59
2866 5359 4.318050 GCTTGTTGATTTCGCCAAACTTTC 60.318 41.667 0.00 0.00 0.00 2.62
2889 5382 1.167851 TGATTGCTGAAGGAAAGCCG 58.832 50.000 0.00 0.00 40.06 5.52
2894 5387 1.239347 GCTGAAGGAAAGCCGAGTTT 58.761 50.000 0.00 0.00 39.96 2.66
3027 5523 8.796475 GTTTATGGTGATAGCATGGAATATGTT 58.204 33.333 3.94 0.00 36.89 2.71
3030 5526 5.009911 TGGTGATAGCATGGAATATGTTTGC 59.990 40.000 0.00 0.00 0.00 3.68
3039 5535 5.389859 TGGAATATGTTTGCCTCTGTTTG 57.610 39.130 0.00 0.00 0.00 2.93
3075 5571 0.400594 AGGGGTGTGTGGAAGTTAGC 59.599 55.000 0.00 0.00 0.00 3.09
3085 5581 3.520290 TGGAAGTTAGCTATCCACGTG 57.480 47.619 9.08 9.08 38.30 4.49
3089 5585 1.553248 AGTTAGCTATCCACGTGCCAA 59.447 47.619 10.91 0.00 0.00 4.52
3155 5656 4.283212 CCTACCACAACATGTTTGGGATTT 59.717 41.667 28.17 17.47 34.41 2.17
3161 5662 6.287525 CACAACATGTTTGGGATTTAAAGGT 58.712 36.000 8.77 0.00 0.00 3.50
3174 5675 7.766738 TGGGATTTAAAGGTTTTCTTGTTGTTC 59.233 33.333 0.00 0.00 35.55 3.18
3210 5711 4.516698 CCTACCATGCAGGAATTGTCATAC 59.483 45.833 0.00 0.00 41.22 2.39
3222 5723 6.015180 AGGAATTGTCATACAAAAGTGCATGT 60.015 34.615 0.00 0.00 41.96 3.21
3227 5728 7.446001 TGTCATACAAAAGTGCATGTATTCA 57.554 32.000 7.76 7.84 39.96 2.57
3302 5896 4.881850 CAGGGAAAGCAAAAGGTACGATAT 59.118 41.667 0.00 0.00 0.00 1.63
3311 5905 7.107542 AGCAAAAGGTACGATATGGAAAAGTA 58.892 34.615 0.00 0.00 0.00 2.24
3493 6088 9.655769 CAATCTTTTTCCATACTGATCGTATTG 57.344 33.333 7.27 5.44 36.69 1.90
3509 6105 9.710979 TGATCGTATTGATTAAAATTTCGGTTC 57.289 29.630 0.00 0.00 37.47 3.62
3526 6122 2.481276 GGTTCAACTCCAACCTGCAAAC 60.481 50.000 0.00 0.00 40.33 2.93
3548 6144 7.865706 AACTAAGAACAGAAAACAGACATGT 57.134 32.000 0.00 0.00 43.15 3.21
3586 6182 6.583912 ATGTAGTACGATGACCATTTTTCG 57.416 37.500 0.00 0.00 37.60 3.46
3596 6193 7.117454 CGATGACCATTTTTCGTATACACTTC 58.883 38.462 3.32 0.00 0.00 3.01
3598 6195 7.359262 TGACCATTTTTCGTATACACTTCAG 57.641 36.000 3.32 0.00 0.00 3.02
3645 6246 9.437045 GTTGATGCAGTTTTTCCTTTTTAATTG 57.563 29.630 0.00 0.00 0.00 2.32
3677 6278 5.369833 TGTTCCAATTGTCCTCGAGTTTAA 58.630 37.500 12.31 3.38 0.00 1.52
3680 6281 6.494893 TCCAATTGTCCTCGAGTTTAATTG 57.505 37.500 24.10 24.10 36.06 2.32
3718 6319 6.946229 TTGTTTCTCTAAGTGATACGAAGC 57.054 37.500 0.00 0.00 0.00 3.86
3779 6380 0.249699 TTGTCGACTCCATTGCACGT 60.250 50.000 17.92 0.00 0.00 4.49
3803 6404 3.882288 TCTTGACACACTTATTGCAAGCA 59.118 39.130 4.94 0.00 32.63 3.91
3805 6406 2.948315 TGACACACTTATTGCAAGCACA 59.052 40.909 4.94 0.00 0.00 4.57
3905 6506 8.525316 AGTGATCATGCATTAAAACTTGAATCA 58.475 29.630 0.00 0.00 0.00 2.57
3992 6593 1.268640 GCTCTAGGAAGCGAGGTAACG 60.269 57.143 0.00 0.00 35.00 3.18
3997 6598 1.345415 AGGAAGCGAGGTAACGGAAAA 59.655 47.619 0.00 0.00 46.39 2.29
4072 6676 7.971168 GTCTGAATATATCTGATAGTGTTCCCG 59.029 40.741 3.48 3.04 38.16 5.14
4077 6681 1.067142 TCTGATAGTGTTCCCGTGCAC 60.067 52.381 6.82 6.82 35.98 4.57
4103 6707 5.347635 CACTTCATTCAATGCAGAAACATGG 59.652 40.000 3.84 0.00 0.00 3.66
4171 6799 9.911788 ACATCTTTATTTCTTGTATCAGTGGAT 57.088 29.630 0.00 0.00 37.55 3.41
4174 6802 9.605275 TCTTTATTTCTTGTATCAGTGGATCTG 57.395 33.333 0.00 0.00 44.85 2.90
4175 6803 9.388506 CTTTATTTCTTGTATCAGTGGATCTGT 57.611 33.333 0.00 0.00 43.97 3.41
4176 6804 9.739276 TTTATTTCTTGTATCAGTGGATCTGTT 57.261 29.630 0.00 0.00 43.97 3.16
4178 6806 8.723942 ATTTCTTGTATCAGTGGATCTGTTAC 57.276 34.615 0.00 8.32 43.82 2.50
4223 6851 6.780457 ATTATTTTACTGGCATGCAGAACT 57.220 33.333 21.36 3.36 0.00 3.01
4224 6852 4.708726 ATTTTACTGGCATGCAGAACTC 57.291 40.909 21.36 0.64 0.00 3.01
4225 6853 2.857186 TTACTGGCATGCAGAACTCA 57.143 45.000 21.36 5.94 0.00 3.41
4226 6854 2.099141 TACTGGCATGCAGAACTCAC 57.901 50.000 21.36 0.00 0.00 3.51
4227 6855 0.109153 ACTGGCATGCAGAACTCACA 59.891 50.000 21.36 4.37 0.00 3.58
4228 6856 0.520404 CTGGCATGCAGAACTCACAC 59.480 55.000 21.36 0.00 0.00 3.82
4243 6871 4.495422 ACTCACACCATATTCGACTTCAC 58.505 43.478 0.00 0.00 0.00 3.18
4269 6897 5.426504 AGTGCTTGAGGATTCTGTTAGATG 58.573 41.667 0.00 0.00 0.00 2.90
4293 6921 4.688021 TGTAGCAAAATGTTTGGACCAAC 58.312 39.130 6.36 3.20 0.00 3.77
4317 6945 3.599343 CTGCTTACAGGTGTATGCTGAA 58.401 45.455 21.77 7.55 45.96 3.02
4319 6947 4.588899 TGCTTACAGGTGTATGCTGAATT 58.411 39.130 21.77 0.00 45.96 2.17
4320 6948 4.395854 TGCTTACAGGTGTATGCTGAATTG 59.604 41.667 21.77 0.00 45.96 2.32
4358 6986 7.731054 TGGCCTAAAGTTACACAATTTTGATT 58.269 30.769 3.32 0.00 0.00 2.57
4414 7042 1.135721 GATGCCTGGTTTTGATCCTGC 59.864 52.381 0.00 0.00 0.00 4.85
4449 7077 4.343526 TGGCTCAGAGAGTCCTTATCAATC 59.656 45.833 0.00 0.00 32.68 2.67
4636 7267 3.295093 TGGAAAGCCTGTGTTGATTGAA 58.705 40.909 0.00 0.00 34.31 2.69
4738 7369 4.644685 ACAGGTGTTACAATTGCAGTTCTT 59.355 37.500 5.05 0.00 0.00 2.52
4743 7374 4.887071 TGTTACAATTGCAGTTCTTCTGGT 59.113 37.500 5.05 0.00 43.78 4.00
4774 7405 1.999735 CTAGGGTACAACACATGCACG 59.000 52.381 0.00 0.00 0.00 5.34
4781 7412 1.122849 CAACACATGCACGCTTTGAC 58.877 50.000 0.00 0.00 0.00 3.18
4846 7477 3.044235 TGCTACATATCTTCCATGCCG 57.956 47.619 0.00 0.00 0.00 5.69
4853 7484 1.033746 ATCTTCCATGCCGCACTTGG 61.034 55.000 6.66 6.66 43.47 3.61
4959 7591 4.574892 TCGACAATGGCTTTTATGTGAGA 58.425 39.130 0.00 0.00 0.00 3.27
4960 7592 4.631377 TCGACAATGGCTTTTATGTGAGAG 59.369 41.667 0.00 0.00 0.00 3.20
4961 7593 4.393062 CGACAATGGCTTTTATGTGAGAGT 59.607 41.667 0.00 0.00 0.00 3.24
4985 7617 4.522789 GGAAATTTGTGTGTGTAGGTGGAT 59.477 41.667 0.00 0.00 0.00 3.41
5023 7655 1.144708 TGGAAGAGCACCATTCACCAA 59.855 47.619 0.00 0.00 32.03 3.67
5062 7694 8.617809 GGAAAATGTGAGTACTTGAAAGTGTAA 58.382 33.333 5.95 0.00 40.07 2.41
5094 7726 8.579863 AGAAGAAAATGCTGCAGTTTTATTAGT 58.420 29.630 26.01 13.34 31.79 2.24
5096 7728 7.885297 AGAAAATGCTGCAGTTTTATTAGTCA 58.115 30.769 26.01 0.33 31.79 3.41
5235 7867 6.697019 ACAAATTGCTACACTGAACAATTGTC 59.303 34.615 12.39 6.33 40.77 3.18
5259 7891 2.433970 CCAATGGCCCGTTTGGATATTT 59.566 45.455 19.50 0.00 44.23 1.40
5399 8031 2.687425 ACATGCACTTGTGTTGTTGCTA 59.313 40.909 0.00 0.00 0.00 3.49
5405 8037 4.613622 GCACTTGTGTTGTTGCTACTATGG 60.614 45.833 0.00 0.00 0.00 2.74
5560 8192 1.729586 TGGGCTGACAGAGGTAAGTT 58.270 50.000 6.65 0.00 0.00 2.66
5563 8195 2.038557 GGGCTGACAGAGGTAAGTTGAA 59.961 50.000 6.65 0.00 0.00 2.69
5682 8315 9.618890 ATTCTGTTACTGCATTTGATATGTACT 57.381 29.630 0.00 0.00 0.00 2.73
5683 8316 8.424274 TCTGTTACTGCATTTGATATGTACTG 57.576 34.615 0.00 0.00 0.00 2.74
5714 8347 6.534793 TGAAAAGAGAAAAACATTTGACCAGC 59.465 34.615 0.00 0.00 0.00 4.85
5737 8370 2.889678 TGTGTTGAATATGTTGCAGCCA 59.110 40.909 0.00 0.00 0.00 4.75
5794 8427 5.129815 TGAGGTAAGTGTTGTTAAGACCAGT 59.870 40.000 0.00 0.00 0.00 4.00
5867 8500 8.177119 TGCTAAGGTGATTCTGTTTTAACATT 57.823 30.769 0.00 0.00 38.41 2.71
5904 8537 3.456280 TGCATTGTTTTCAGACTTTGCC 58.544 40.909 0.00 0.00 31.52 4.52
5907 8540 4.696455 CATTGTTTTCAGACTTTGCCCTT 58.304 39.130 0.00 0.00 0.00 3.95
5924 8557 1.273327 CCTTGGGGATCACAGTTTTGC 59.727 52.381 0.00 0.00 33.58 3.68
5925 8558 1.962807 CTTGGGGATCACAGTTTTGCA 59.037 47.619 0.00 0.00 0.00 4.08
5926 8559 2.307496 TGGGGATCACAGTTTTGCAT 57.693 45.000 0.00 0.00 0.00 3.96
5927 8560 1.894466 TGGGGATCACAGTTTTGCATG 59.106 47.619 0.00 0.00 0.00 4.06
5928 8561 1.895131 GGGGATCACAGTTTTGCATGT 59.105 47.619 0.00 0.00 0.00 3.21
5929 8562 2.353011 GGGGATCACAGTTTTGCATGTG 60.353 50.000 11.18 11.18 46.52 3.21
5956 8589 6.127925 TGCATCCACTGACATATTTTGAGTTC 60.128 38.462 0.00 0.00 0.00 3.01
6037 8670 2.100584 TGTTCACATCTTGGGTTTGCAC 59.899 45.455 0.00 0.00 0.00 4.57
6055 8688 1.145598 CGCTGCTGACCTCATCCAT 59.854 57.895 0.00 0.00 0.00 3.41
6088 8721 0.179045 CCATTGCCCTAGGAACTCGG 60.179 60.000 11.48 0.88 41.49 4.63
6105 8738 3.510360 ACTCGGTTGCAAGTGAGTATAGT 59.490 43.478 24.62 7.51 39.76 2.12
6111 8744 6.701841 CGGTTGCAAGTGAGTATAGTTGATAT 59.298 38.462 0.00 0.00 33.76 1.63
6116 8749 9.109393 TGCAAGTGAGTATAGTTGATATTTTCC 57.891 33.333 0.00 0.00 33.76 3.13
6134 8769 4.453480 TTCCTTCACTCCTTTCCATTGT 57.547 40.909 0.00 0.00 0.00 2.71
6170 8805 8.813643 AGTTTATAGTAACACATAATCGCCTC 57.186 34.615 0.00 0.00 0.00 4.70
6172 8807 5.801531 ATAGTAACACATAATCGCCTCCA 57.198 39.130 0.00 0.00 0.00 3.86
6173 8808 3.793559 AGTAACACATAATCGCCTCCAC 58.206 45.455 0.00 0.00 0.00 4.02
6174 8809 2.038387 AACACATAATCGCCTCCACC 57.962 50.000 0.00 0.00 0.00 4.61
6175 8810 0.908910 ACACATAATCGCCTCCACCA 59.091 50.000 0.00 0.00 0.00 4.17
6176 8811 1.299541 CACATAATCGCCTCCACCAC 58.700 55.000 0.00 0.00 0.00 4.16
6198 8833 2.095516 GCAGGAACTTAAGCTTGCTGTC 60.096 50.000 25.13 18.62 38.84 3.51
6213 8848 0.822944 CTGTCCATGCACACCCAACA 60.823 55.000 0.00 0.00 0.00 3.33
6225 8860 3.126858 CACACCCAACATTATCCGAAGTG 59.873 47.826 0.00 0.00 0.00 3.16
6298 8933 3.370978 TCAGCCGCTTAGAAAAATTCTCG 59.629 43.478 0.00 0.00 41.14 4.04
6554 9189 0.413037 TCATGGTGCCCAGGGAAAAT 59.587 50.000 10.89 0.00 36.75 1.82
6675 9310 3.261137 AGTTGTAAGTCTAGCCAGGGTTC 59.739 47.826 0.00 0.00 0.00 3.62
6693 9328 4.095610 GGTTCTTCAAATAATCGGCGTTG 58.904 43.478 6.85 3.55 0.00 4.10
6722 9358 5.555256 CGCGATGTATTTTAAGACTGCTCAG 60.555 44.000 0.00 0.00 0.00 3.35
6724 9360 6.183360 GCGATGTATTTTAAGACTGCTCAGTT 60.183 38.462 3.83 0.00 42.66 3.16
6725 9361 7.394872 CGATGTATTTTAAGACTGCTCAGTTC 58.605 38.462 3.83 0.00 42.66 3.01
6726 9362 7.063426 CGATGTATTTTAAGACTGCTCAGTTCA 59.937 37.037 3.83 0.00 42.66 3.18
6727 9363 7.658179 TGTATTTTAAGACTGCTCAGTTCAG 57.342 36.000 3.83 0.00 42.66 3.02
6728 9364 5.619625 ATTTTAAGACTGCTCAGTTCAGC 57.380 39.130 3.83 0.00 42.66 4.26
6769 9405 1.609072 GTTTGCAGGTTGAAGGACTCC 59.391 52.381 0.00 0.00 0.00 3.85
6791 9427 5.304614 TCCAAACTCTGCTGTCTTAAGTACT 59.695 40.000 1.63 0.00 0.00 2.73
6800 9436 7.069455 TCTGCTGTCTTAAGTACTGCCATATAA 59.931 37.037 21.99 10.41 40.05 0.98
6805 9441 8.202137 TGTCTTAAGTACTGCCATATAAACTCC 58.798 37.037 0.00 0.00 0.00 3.85
6852 9488 3.955650 AGTTGTCGTGCCATAAGTACT 57.044 42.857 0.00 0.00 0.00 2.73
6924 9564 8.691661 AGTGGACTTGATTTGTAAAACATACT 57.308 30.769 0.00 0.00 0.00 2.12
6925 9565 8.784043 AGTGGACTTGATTTGTAAAACATACTC 58.216 33.333 0.00 0.00 0.00 2.59
6926 9566 8.021396 GTGGACTTGATTTGTAAAACATACTCC 58.979 37.037 0.00 0.00 0.00 3.85
6927 9567 7.175990 TGGACTTGATTTGTAAAACATACTCCC 59.824 37.037 0.00 0.00 0.00 4.30
6928 9568 7.393515 GGACTTGATTTGTAAAACATACTCCCT 59.606 37.037 0.00 0.00 0.00 4.20
6929 9569 8.336801 ACTTGATTTGTAAAACATACTCCCTC 57.663 34.615 0.00 0.00 0.00 4.30
6930 9570 8.164070 ACTTGATTTGTAAAACATACTCCCTCT 58.836 33.333 0.00 0.00 0.00 3.69
6931 9571 7.921786 TGATTTGTAAAACATACTCCCTCTG 57.078 36.000 0.00 0.00 0.00 3.35
6932 9572 7.458397 TGATTTGTAAAACATACTCCCTCTGT 58.542 34.615 0.00 0.00 0.00 3.41
6933 9573 7.606456 TGATTTGTAAAACATACTCCCTCTGTC 59.394 37.037 0.00 0.00 0.00 3.51
6934 9574 6.681729 TTGTAAAACATACTCCCTCTGTCT 57.318 37.500 0.00 0.00 0.00 3.41
6935 9575 6.282199 TGTAAAACATACTCCCTCTGTCTC 57.718 41.667 0.00 0.00 0.00 3.36
6936 9576 5.778241 TGTAAAACATACTCCCTCTGTCTCA 59.222 40.000 0.00 0.00 0.00 3.27
6937 9577 6.440647 TGTAAAACATACTCCCTCTGTCTCAT 59.559 38.462 0.00 0.00 0.00 2.90
6938 9578 7.618117 TGTAAAACATACTCCCTCTGTCTCATA 59.382 37.037 0.00 0.00 0.00 2.15
6939 9579 7.496346 AAAACATACTCCCTCTGTCTCATAA 57.504 36.000 0.00 0.00 0.00 1.90
6940 9580 7.682787 AAACATACTCCCTCTGTCTCATAAT 57.317 36.000 0.00 0.00 0.00 1.28
6941 9581 8.783660 AAACATACTCCCTCTGTCTCATAATA 57.216 34.615 0.00 0.00 0.00 0.98
6942 9582 8.964533 AACATACTCCCTCTGTCTCATAATAT 57.035 34.615 0.00 0.00 0.00 1.28
6948 9588 9.836179 ACTCCCTCTGTCTCATAATATAAGAAT 57.164 33.333 0.00 0.00 0.00 2.40
6950 9590 9.607333 TCCCTCTGTCTCATAATATAAGAATGT 57.393 33.333 0.00 0.00 0.00 2.71
6979 9619 8.592105 TTAAACGTTCTTATATTATGGGACGG 57.408 34.615 0.00 1.76 0.00 4.79
6980 9620 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
6981 9621 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
6982 9622 4.863131 CGTTCTTATATTATGGGACGGAGC 59.137 45.833 0.00 0.00 0.00 4.70
6983 9623 4.713824 TCTTATATTATGGGACGGAGCG 57.286 45.455 0.00 0.00 0.00 5.03
7156 10050 5.353123 GGCTTTTGTAAGTATCGTCCATTCA 59.647 40.000 0.00 0.00 33.74 2.57
7170 10064 7.307493 TCGTCCATTCATCAATAGAAGTTTG 57.693 36.000 0.00 0.00 0.00 2.93
7174 10068 9.167311 GTCCATTCATCAATAGAAGTTTGTACT 57.833 33.333 0.00 0.00 35.68 2.73
7175 10069 9.383519 TCCATTCATCAATAGAAGTTTGTACTC 57.616 33.333 0.00 0.00 31.99 2.59
7176 10070 8.616076 CCATTCATCAATAGAAGTTTGTACTCC 58.384 37.037 0.00 0.00 31.99 3.85
7177 10071 8.616076 CATTCATCAATAGAAGTTTGTACTCCC 58.384 37.037 0.00 0.00 31.99 4.30
7179 10073 7.556844 TCATCAATAGAAGTTTGTACTCCCTC 58.443 38.462 0.00 0.00 31.99 4.30
7180 10074 7.400339 TCATCAATAGAAGTTTGTACTCCCTCT 59.600 37.037 0.00 0.00 31.99 3.69
7181 10075 6.936279 TCAATAGAAGTTTGTACTCCCTCTG 58.064 40.000 0.00 0.00 31.99 3.35
7182 10076 6.497259 TCAATAGAAGTTTGTACTCCCTCTGT 59.503 38.462 0.00 0.00 31.99 3.41
7183 10077 6.936968 ATAGAAGTTTGTACTCCCTCTGTT 57.063 37.500 0.00 0.00 31.99 3.16
7184 10078 5.632034 AGAAGTTTGTACTCCCTCTGTTT 57.368 39.130 0.00 0.00 31.99 2.83
7185 10079 6.002653 AGAAGTTTGTACTCCCTCTGTTTT 57.997 37.500 0.00 0.00 31.99 2.43
7186 10080 6.424032 AGAAGTTTGTACTCCCTCTGTTTTT 58.576 36.000 0.00 0.00 31.99 1.94
7187 10081 7.571025 AGAAGTTTGTACTCCCTCTGTTTTTA 58.429 34.615 0.00 0.00 31.99 1.52
7188 10082 8.218488 AGAAGTTTGTACTCCCTCTGTTTTTAT 58.782 33.333 0.00 0.00 31.99 1.40
7189 10083 8.762481 AAGTTTGTACTCCCTCTGTTTTTATT 57.238 30.769 0.00 0.00 31.99 1.40
7190 10084 8.762481 AGTTTGTACTCCCTCTGTTTTTATTT 57.238 30.769 0.00 0.00 0.00 1.40
7191 10085 9.856162 AGTTTGTACTCCCTCTGTTTTTATTTA 57.144 29.630 0.00 0.00 0.00 1.40
7192 10086 9.888878 GTTTGTACTCCCTCTGTTTTTATTTAC 57.111 33.333 0.00 0.00 0.00 2.01
7193 10087 9.856162 TTTGTACTCCCTCTGTTTTTATTTACT 57.144 29.630 0.00 0.00 0.00 2.24
7194 10088 9.856162 TTGTACTCCCTCTGTTTTTATTTACTT 57.144 29.630 0.00 0.00 0.00 2.24
7195 10089 9.856162 TGTACTCCCTCTGTTTTTATTTACTTT 57.144 29.630 0.00 0.00 0.00 2.66
7197 10091 7.658261 ACTCCCTCTGTTTTTATTTACTTTGC 58.342 34.615 0.00 0.00 0.00 3.68
7198 10092 7.286775 ACTCCCTCTGTTTTTATTTACTTTGCA 59.713 33.333 0.00 0.00 0.00 4.08
7199 10093 8.189119 TCCCTCTGTTTTTATTTACTTTGCAT 57.811 30.769 0.00 0.00 0.00 3.96
7200 10094 9.303116 TCCCTCTGTTTTTATTTACTTTGCATA 57.697 29.630 0.00 0.00 0.00 3.14
7217 10111 9.236006 ACTTTGCATATTAGAATTGACTGAAGT 57.764 29.630 0.00 0.00 0.00 3.01
7218 10112 9.713740 CTTTGCATATTAGAATTGACTGAAGTC 57.286 33.333 3.41 3.41 44.97 3.01
7362 10256 4.918810 CTTGGTCCAAGTTTGTAAAGCT 57.081 40.909 21.76 0.00 39.89 3.74
7364 10258 6.385649 CTTGGTCCAAGTTTGTAAAGCTTA 57.614 37.500 21.76 0.00 45.96 3.09
7365 10259 6.777213 TTGGTCCAAGTTTGTAAAGCTTAA 57.223 33.333 0.00 0.00 45.96 1.85
7366 10260 6.139048 TGGTCCAAGTTTGTAAAGCTTAAC 57.861 37.500 0.00 0.00 45.96 2.01
7367 10261 5.889289 TGGTCCAAGTTTGTAAAGCTTAACT 59.111 36.000 0.00 2.57 45.96 2.24
7368 10262 6.378848 TGGTCCAAGTTTGTAAAGCTTAACTT 59.621 34.615 16.01 16.01 45.96 2.66
7369 10263 7.093684 TGGTCCAAGTTTGTAAAGCTTAACTTT 60.094 33.333 18.22 5.84 45.96 2.66
7370 10264 7.222031 GGTCCAAGTTTGTAAAGCTTAACTTTG 59.778 37.037 18.22 15.76 45.96 2.77
7371 10265 7.971722 GTCCAAGTTTGTAAAGCTTAACTTTGA 59.028 33.333 18.22 17.31 45.96 2.69
7372 10266 7.971722 TCCAAGTTTGTAAAGCTTAACTTTGAC 59.028 33.333 18.22 5.19 45.96 3.18
7373 10267 7.222031 CCAAGTTTGTAAAGCTTAACTTTGACC 59.778 37.037 18.22 0.00 45.96 4.02
7374 10268 7.757624 CAAGTTTGTAAAGCTTAACTTTGACCA 59.242 33.333 18.22 0.00 45.96 4.02
7375 10269 8.308207 AAGTTTGTAAAGCTTAACTTTGACCAA 58.692 29.630 16.01 8.97 45.85 3.67
7388 10282 5.484173 CTTTGACCAAAGCTAATATGCGA 57.516 39.130 9.25 0.00 40.94 5.10
7389 10283 5.879237 CTTTGACCAAAGCTAATATGCGAA 58.121 37.500 9.25 0.00 40.94 4.70
7390 10284 4.875544 TGACCAAAGCTAATATGCGAAC 57.124 40.909 0.00 0.00 38.13 3.95
7391 10285 4.513442 TGACCAAAGCTAATATGCGAACT 58.487 39.130 0.00 0.00 38.13 3.01
7392 10286 5.666462 TGACCAAAGCTAATATGCGAACTA 58.334 37.500 0.00 0.00 38.13 2.24
7393 10287 6.110033 TGACCAAAGCTAATATGCGAACTAA 58.890 36.000 0.00 0.00 38.13 2.24
7394 10288 6.596106 TGACCAAAGCTAATATGCGAACTAAA 59.404 34.615 0.00 0.00 38.13 1.85
7395 10289 7.282224 TGACCAAAGCTAATATGCGAACTAAAT 59.718 33.333 0.00 0.00 38.13 1.40
7396 10290 8.671384 ACCAAAGCTAATATGCGAACTAAATA 57.329 30.769 0.00 0.00 38.13 1.40
7397 10291 9.116067 ACCAAAGCTAATATGCGAACTAAATAA 57.884 29.630 0.00 0.00 38.13 1.40
7398 10292 9.944663 CCAAAGCTAATATGCGAACTAAATAAA 57.055 29.630 0.00 0.00 38.13 1.40
7406 10300 9.965824 AATATGCGAACTAAATAAAAATGGAGG 57.034 29.630 0.00 0.00 0.00 4.30
7407 10301 6.202516 TGCGAACTAAATAAAAATGGAGGG 57.797 37.500 0.00 0.00 0.00 4.30
7408 10302 5.946972 TGCGAACTAAATAAAAATGGAGGGA 59.053 36.000 0.00 0.00 0.00 4.20
7409 10303 6.094881 TGCGAACTAAATAAAAATGGAGGGAG 59.905 38.462 0.00 0.00 0.00 4.30
7410 10304 6.095021 GCGAACTAAATAAAAATGGAGGGAGT 59.905 38.462 0.00 0.00 0.00 3.85
7411 10305 7.281549 GCGAACTAAATAAAAATGGAGGGAGTA 59.718 37.037 0.00 0.00 0.00 2.59
7412 10306 8.610035 CGAACTAAATAAAAATGGAGGGAGTAC 58.390 37.037 0.00 0.00 0.00 2.73
7413 10307 8.818622 AACTAAATAAAAATGGAGGGAGTACC 57.181 34.615 0.00 0.00 40.67 3.34
7427 10321 5.321934 GGGAGTACCTAATAGAGAGGACA 57.678 47.826 0.00 0.00 37.53 4.02
7429 10323 6.134754 GGGAGTACCTAATAGAGAGGACAAA 58.865 44.000 0.00 0.00 37.53 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.973051 TCCGTTTGTCGAACAATGAAAATG 59.027 37.500 3.85 0.00 38.00 2.32
2 3 5.176407 TCCGTTTGTCGAACAATGAAAAT 57.824 34.783 3.85 0.00 38.00 1.82
6 7 3.058570 CCATTCCGTTTGTCGAACAATGA 60.059 43.478 13.80 1.81 38.00 2.57
7 8 3.058570 TCCATTCCGTTTGTCGAACAATG 60.059 43.478 3.85 6.44 38.00 2.82
8 9 3.058501 GTCCATTCCGTTTGTCGAACAAT 60.059 43.478 3.85 0.00 38.00 2.71
9 10 2.288458 GTCCATTCCGTTTGTCGAACAA 59.712 45.455 3.85 0.00 42.86 2.83
14 15 1.196808 CTTGGTCCATTCCGTTTGTCG 59.803 52.381 0.00 0.00 39.52 4.35
18 19 1.202722 ACGACTTGGTCCATTCCGTTT 60.203 47.619 0.00 0.00 0.00 3.60
23 24 2.232941 TGGTAGACGACTTGGTCCATTC 59.767 50.000 0.00 0.00 37.66 2.67
29 30 0.113776 TCCCTGGTAGACGACTTGGT 59.886 55.000 0.00 0.00 0.00 3.67
36 37 1.341531 GATGATGGTCCCTGGTAGACG 59.658 57.143 0.00 0.00 34.97 4.18
51 52 2.283298 GGTCTCGCAATGTGTGATGAT 58.717 47.619 1.83 0.00 36.18 2.45
53 54 1.395954 CTGGTCTCGCAATGTGTGATG 59.604 52.381 1.83 0.00 36.18 3.07
54 55 1.002430 ACTGGTCTCGCAATGTGTGAT 59.998 47.619 1.83 0.00 36.18 3.06
65 75 2.455674 TTCAATGGTCACTGGTCTCG 57.544 50.000 0.00 0.00 0.00 4.04
93 104 0.178947 GTTGGGATTGGGGTTGGTCA 60.179 55.000 0.00 0.00 0.00 4.02
123 134 2.004583 TTTCTCGGTGTTGGCTATCG 57.995 50.000 0.00 0.00 0.00 2.92
126 137 4.456566 GGTTTATTTTCTCGGTGTTGGCTA 59.543 41.667 0.00 0.00 0.00 3.93
128 139 3.004944 TGGTTTATTTTCTCGGTGTTGGC 59.995 43.478 0.00 0.00 0.00 4.52
141 152 9.233649 TGACGATGGTTTTAGTATGGTTTATTT 57.766 29.630 0.00 0.00 0.00 1.40
158 169 3.314541 GTCTTGTTAGGTGACGATGGT 57.685 47.619 0.00 0.00 0.00 3.55
164 175 4.389077 CCTTTGATCGTCTTGTTAGGTGAC 59.611 45.833 0.00 0.00 0.00 3.67
170 181 4.023536 GGTTTGCCTTTGATCGTCTTGTTA 60.024 41.667 0.00 0.00 0.00 2.41
172 183 2.293399 GGTTTGCCTTTGATCGTCTTGT 59.707 45.455 0.00 0.00 0.00 3.16
173 184 2.293122 TGGTTTGCCTTTGATCGTCTTG 59.707 45.455 0.00 0.00 35.27 3.02
174 185 2.582052 TGGTTTGCCTTTGATCGTCTT 58.418 42.857 0.00 0.00 35.27 3.01
175 186 2.270352 TGGTTTGCCTTTGATCGTCT 57.730 45.000 0.00 0.00 35.27 4.18
176 187 3.308530 CTTTGGTTTGCCTTTGATCGTC 58.691 45.455 0.00 0.00 35.27 4.20
177 188 2.545742 GCTTTGGTTTGCCTTTGATCGT 60.546 45.455 0.00 0.00 35.27 3.73
178 189 2.061028 GCTTTGGTTTGCCTTTGATCG 58.939 47.619 0.00 0.00 35.27 3.69
179 190 2.061028 CGCTTTGGTTTGCCTTTGATC 58.939 47.619 0.00 0.00 35.27 2.92
180 191 1.873486 GCGCTTTGGTTTGCCTTTGAT 60.873 47.619 0.00 0.00 35.27 2.57
181 192 0.529555 GCGCTTTGGTTTGCCTTTGA 60.530 50.000 0.00 0.00 35.27 2.69
192 203 2.076100 TGTGAGTTATCTGCGCTTTGG 58.924 47.619 9.73 0.00 0.00 3.28
199 210 3.201290 CCCAGTCATGTGAGTTATCTGC 58.799 50.000 0.00 0.00 0.00 4.26
200 211 3.201290 GCCCAGTCATGTGAGTTATCTG 58.799 50.000 0.00 0.00 0.00 2.90
202 213 3.266510 TGCCCAGTCATGTGAGTTATC 57.733 47.619 0.00 0.00 0.00 1.75
204 215 2.637382 TCTTGCCCAGTCATGTGAGTTA 59.363 45.455 0.00 0.00 0.00 2.24
233 244 3.103911 GTCGTCTCGTGGCGTTGG 61.104 66.667 11.54 0.00 0.00 3.77
237 248 4.175489 ATCCGTCGTCTCGTGGCG 62.175 66.667 4.90 4.90 0.00 5.69
239 250 0.100682 ATTCATCCGTCGTCTCGTGG 59.899 55.000 0.00 0.00 0.00 4.94
301 312 1.606885 CCCAACGATGGCATGCCTTT 61.607 55.000 35.53 23.66 46.09 3.11
335 346 1.746615 CGTGAGGCAATGGACAGGG 60.747 63.158 0.00 0.00 0.00 4.45
336 347 1.003355 ACGTGAGGCAATGGACAGG 60.003 57.895 0.00 0.00 0.00 4.00
337 348 1.915614 GCACGTGAGGCAATGGACAG 61.916 60.000 22.23 0.00 0.00 3.51
351 362 1.817941 GGTCACACAACCTGCACGT 60.818 57.895 0.00 0.00 36.32 4.49
354 365 2.194597 GGGGTCACACAACCTGCA 59.805 61.111 0.00 0.00 39.42 4.41
357 368 2.460853 CCCTGGGGTCACACAACCT 61.461 63.158 4.27 0.00 39.42 3.50
368 379 0.680921 CAATGTGTAGCACCCTGGGG 60.681 60.000 18.88 7.87 42.03 4.96
372 383 1.377202 CGGCAATGTGTAGCACCCT 60.377 57.895 0.00 0.00 32.73 4.34
773 3043 1.165270 AGTTACGGCAGGTCAAATGC 58.835 50.000 0.00 0.00 43.09 3.56
783 3053 2.489329 GTCAGTGTAGGTAGTTACGGCA 59.511 50.000 0.00 0.00 0.00 5.69
1314 3585 6.732154 AGTTGACAGAAAATCATGAACACAG 58.268 36.000 0.00 0.00 0.00 3.66
1340 3617 4.762956 AGTAACGTGGTCTAACTCTGAC 57.237 45.455 0.00 0.00 0.00 3.51
1350 3627 5.163982 GCAGAGTATGAAAAGTAACGTGGTC 60.164 44.000 0.00 0.00 0.00 4.02
1384 3661 7.167136 GCTGATCAGAGCTTGCAAATTAAATAC 59.833 37.037 27.04 0.00 35.95 1.89
1385 3662 7.148035 TGCTGATCAGAGCTTGCAAATTAAATA 60.148 33.333 27.04 0.00 39.90 1.40
1414 3691 2.380064 AATTTCCAGCTCCAACACCA 57.620 45.000 0.00 0.00 0.00 4.17
1419 3696 5.350504 TCAAACAAAATTTCCAGCTCCAA 57.649 34.783 0.00 0.00 0.00 3.53
1443 3720 7.755591 AGCAGAACATAAACATCAACACTATG 58.244 34.615 0.00 0.00 0.00 2.23
1464 3744 3.254827 CTGCATGAAATCATCGAGCAG 57.745 47.619 15.46 15.46 45.69 4.24
1500 3780 4.736307 TCGATTTAACATATCACGACACGG 59.264 41.667 0.00 0.00 0.00 4.94
1505 3785 6.262496 AGAGACCTCGATTTAACATATCACGA 59.738 38.462 0.00 0.00 34.09 4.35
1506 3786 6.439599 AGAGACCTCGATTTAACATATCACG 58.560 40.000 0.00 0.00 34.09 4.35
1507 3787 8.543774 CAAAGAGACCTCGATTTAACATATCAC 58.456 37.037 0.00 0.00 34.09 3.06
1508 3788 8.474831 TCAAAGAGACCTCGATTTAACATATCA 58.525 33.333 0.00 0.00 34.09 2.15
1509 3789 8.873215 TCAAAGAGACCTCGATTTAACATATC 57.127 34.615 0.00 0.00 34.09 1.63
1512 3792 6.702329 ACTCAAAGAGACCTCGATTTAACAT 58.298 36.000 0.31 0.00 33.32 2.71
1554 3834 5.757320 CCCATTTGTGCACACTGAAATTAAA 59.243 36.000 21.56 8.23 0.00 1.52
1555 3835 5.163364 ACCCATTTGTGCACACTGAAATTAA 60.163 36.000 21.56 9.03 0.00 1.40
1558 3838 2.699846 ACCCATTTGTGCACACTGAAAT 59.300 40.909 21.56 13.86 0.00 2.17
1559 3839 2.106566 ACCCATTTGTGCACACTGAAA 58.893 42.857 21.56 11.90 0.00 2.69
1560 3840 1.408340 CACCCATTTGTGCACACTGAA 59.592 47.619 21.56 12.32 0.00 3.02
1561 3841 1.031235 CACCCATTTGTGCACACTGA 58.969 50.000 21.56 9.21 0.00 3.41
1563 3843 0.106268 TCCACCCATTTGTGCACACT 60.106 50.000 21.56 7.21 34.85 3.55
1564 3844 0.749649 TTCCACCCATTTGTGCACAC 59.250 50.000 21.56 0.00 34.85 3.82
1565 3845 1.343789 CATTCCACCCATTTGTGCACA 59.656 47.619 17.42 17.42 34.85 4.57
1619 3899 3.243068 CGCTGGTGCTGTAAAGAAGTTTT 60.243 43.478 0.00 0.00 36.97 2.43
1643 3923 8.516234 ACACTAGAACAACTGATCAGTAACTAG 58.484 37.037 30.36 30.36 41.58 2.57
1783 4072 8.980481 AGGAATAGAAGTTCAGAACAAAAAGA 57.020 30.769 15.85 0.00 0.00 2.52
1845 4134 4.256110 TGGAAGCAATGTCAGACATACTG 58.744 43.478 16.71 12.91 46.97 2.74
1945 4235 2.281484 CAGGTCCCACCCACAACG 60.281 66.667 0.00 0.00 39.75 4.10
1972 4262 0.535102 CTTTGGACGGAACACAGCCT 60.535 55.000 0.00 0.00 0.00 4.58
2077 4367 4.463891 ACCTGTTTTCAACCCATCATCATC 59.536 41.667 0.00 0.00 0.00 2.92
2093 4383 7.719633 AGTTGTAACACATTCTATGACCTGTTT 59.280 33.333 0.00 0.00 31.88 2.83
2126 4425 6.633325 AATACTCCTGATGCCTAGCAATAT 57.367 37.500 0.00 0.00 43.62 1.28
2127 4426 6.043127 TCAAATACTCCTGATGCCTAGCAATA 59.957 38.462 0.00 0.00 43.62 1.90
2129 4428 4.164030 TCAAATACTCCTGATGCCTAGCAA 59.836 41.667 0.00 0.00 43.62 3.91
2135 4434 4.101741 ACCTACTCAAATACTCCTGATGCC 59.898 45.833 0.00 0.00 0.00 4.40
2147 4446 6.601613 TGTTGACTTTGTGAACCTACTCAAAT 59.398 34.615 0.00 0.00 34.42 2.32
2203 4504 3.837213 ACAGGCATTCTGAAATTCACG 57.163 42.857 0.00 0.00 46.18 4.35
2204 4505 5.403466 GTGAAACAGGCATTCTGAAATTCAC 59.597 40.000 17.92 17.92 46.18 3.18
2241 4542 7.873699 ATAGTTATCAAGGGGCTATACACTT 57.126 36.000 0.00 0.00 0.00 3.16
2250 4551 7.993758 ACTTCTTAGAAATAGTTATCAAGGGGC 59.006 37.037 0.00 0.00 0.00 5.80
2251 4552 9.549078 GACTTCTTAGAAATAGTTATCAAGGGG 57.451 37.037 0.00 0.00 0.00 4.79
2252 4553 9.549078 GGACTTCTTAGAAATAGTTATCAAGGG 57.451 37.037 0.00 0.00 0.00 3.95
2304 4608 6.397272 ACTCAAAGCAATGTGAAGAACAAAA 58.603 32.000 0.00 0.00 43.61 2.44
2343 4647 2.695147 CCCTCCATGATAAAGGGCAAAC 59.305 50.000 8.81 0.00 43.21 2.93
2344 4648 3.030873 CCCTCCATGATAAAGGGCAAA 57.969 47.619 8.81 0.00 43.21 3.68
2360 4664 8.674607 CATACTTTTGGTAAAATGTACTCCCTC 58.325 37.037 0.00 0.00 38.19 4.30
2361 4665 7.122204 GCATACTTTTGGTAAAATGTACTCCCT 59.878 37.037 0.00 0.00 38.19 4.20
2362 4666 7.122204 AGCATACTTTTGGTAAAATGTACTCCC 59.878 37.037 0.00 0.00 38.19 4.30
2364 4668 8.947115 AGAGCATACTTTTGGTAAAATGTACTC 58.053 33.333 0.00 0.00 38.19 2.59
2391 4712 6.493458 AGGAAATGGTTGTAACTTGCAAGTAT 59.507 34.615 31.31 22.03 38.57 2.12
2393 4714 4.649218 AGGAAATGGTTGTAACTTGCAAGT 59.351 37.500 26.36 26.36 42.04 3.16
2397 4718 4.546570 GACAGGAAATGGTTGTAACTTGC 58.453 43.478 0.00 0.00 0.00 4.01
2413 4734 2.046988 CAGCACATGCCGACAGGA 60.047 61.111 0.00 0.00 43.38 3.86
2496 4817 6.430000 TCCAGTTGAAGAAACCTAATACAAGC 59.570 38.462 0.00 0.00 39.85 4.01
2500 4821 9.832445 TCATATCCAGTTGAAGAAACCTAATAC 57.168 33.333 0.00 0.00 39.85 1.89
2665 4986 6.795098 ACTTCTAATTGTACACGCATCAAA 57.205 33.333 0.00 0.00 0.00 2.69
2695 5017 9.341899 CAAAGGTTGCTAGAATTTGTATACAAC 57.658 33.333 17.85 7.16 35.28 3.32
2712 5034 7.379098 AGAAGTATTAGCTTACAAAGGTTGC 57.621 36.000 0.00 0.00 40.27 4.17
2785 5278 1.279271 AGCGACCTTTTATGTCAGGCT 59.721 47.619 0.00 0.00 32.79 4.58
2802 5295 3.525537 ACATTTCCAGATACTGTCAGCG 58.474 45.455 0.00 0.00 0.00 5.18
2804 5297 7.066163 TGCAAATACATTTCCAGATACTGTCAG 59.934 37.037 0.00 0.00 0.00 3.51
2809 5302 7.776969 AGACATGCAAATACATTTCCAGATACT 59.223 33.333 0.00 0.00 28.83 2.12
2836 5329 2.669434 GCGAAATCAACAAGCATGCATT 59.331 40.909 21.98 8.29 0.00 3.56
2866 5359 3.518590 GCTTTCCTTCAGCAATCAATGG 58.481 45.455 0.00 0.00 37.22 3.16
2889 5382 4.760204 TGGCTCCAAAACTAGCTAAAACTC 59.240 41.667 0.00 0.00 0.00 3.01
2894 5387 3.326588 TCAGTGGCTCCAAAACTAGCTAA 59.673 43.478 0.00 0.00 0.00 3.09
2989 5485 9.440773 GCTATCACCATAAACAATAGATCATGA 57.559 33.333 0.00 0.00 0.00 3.07
3027 5523 2.363306 ATCACCACAAACAGAGGCAA 57.637 45.000 0.00 0.00 0.00 4.52
3030 5526 3.057969 TGCTATCACCACAAACAGAGG 57.942 47.619 0.00 0.00 0.00 3.69
3039 5535 1.475751 CCCTGTCCATGCTATCACCAC 60.476 57.143 0.00 0.00 0.00 4.16
3075 5571 1.529226 TGGTTTTGGCACGTGGATAG 58.471 50.000 18.88 0.00 0.00 2.08
3155 5656 7.696992 ACAGAGAACAACAAGAAAACCTTTA 57.303 32.000 0.00 0.00 31.42 1.85
3161 5662 7.027161 GCTGTAAACAGAGAACAACAAGAAAA 58.973 34.615 14.21 0.00 46.59 2.29
3174 5675 3.535561 CATGGTAGGGCTGTAAACAGAG 58.464 50.000 14.21 0.00 46.59 3.35
3210 5711 6.645827 TGATGGTTTGAATACATGCACTTTTG 59.354 34.615 0.00 0.00 0.00 2.44
3227 5728 9.927668 AATCAATAAACGAAATTCTGATGGTTT 57.072 25.926 0.00 0.00 0.00 3.27
3311 5905 7.267857 CAGTGATTTCTTTTTCTGGAAAACCT 58.732 34.615 7.85 0.00 39.70 3.50
3467 6061 9.655769 CAATACGATCAGTATGGAAAAAGATTG 57.344 33.333 9.83 0.00 44.78 2.67
3484 6079 9.710979 TGAACCGAAATTTTAATCAATACGATC 57.289 29.630 0.00 0.00 31.11 3.69
3487 6082 9.337091 AGTTGAACCGAAATTTTAATCAATACG 57.663 29.630 10.68 0.00 0.00 3.06
3493 6088 7.115805 GGTTGGAGTTGAACCGAAATTTTAATC 59.884 37.037 0.00 0.00 33.85 1.75
3509 6105 3.882888 TCTTAGTTTGCAGGTTGGAGTTG 59.117 43.478 0.00 0.00 0.00 3.16
3526 6122 8.012241 GCTTACATGTCTGTTTTCTGTTCTTAG 58.988 37.037 0.00 0.00 36.79 2.18
3586 6182 7.042335 ACCACAGCTAAATCTGAAGTGTATAC 58.958 38.462 0.00 0.00 37.51 1.47
3645 6246 6.362283 CGAGGACAATTGGAACATTACAAAAC 59.638 38.462 10.83 0.00 39.30 2.43
3677 6278 8.237811 AGAAACAAAATGTACTCCACTTCAAT 57.762 30.769 0.00 0.00 0.00 2.57
3680 6281 7.497925 AGAGAAACAAAATGTACTCCACTTC 57.502 36.000 11.32 0.00 35.82 3.01
3739 6340 5.070313 ACAATTGTTGGAAATGGCTACAGTT 59.930 36.000 4.92 0.00 37.65 3.16
3740 6341 4.588528 ACAATTGTTGGAAATGGCTACAGT 59.411 37.500 4.92 0.00 34.12 3.55
3746 6347 2.986479 GTCGACAATTGTTGGAAATGGC 59.014 45.455 22.88 2.45 34.12 4.40
3779 6380 5.704978 TGCTTGCAATAAGTGTGTCAAGATA 59.295 36.000 0.00 0.00 34.68 1.98
3992 6593 6.849588 ATTTGTTGACAGCAAGAATTTTCC 57.150 33.333 4.85 0.00 37.17 3.13
3997 6598 5.916318 TCCAAATTTGTTGACAGCAAGAAT 58.084 33.333 16.73 0.00 37.17 2.40
4046 6650 7.971168 CGGGAACACTATCAGATATATTCAGAC 59.029 40.741 9.22 0.00 0.00 3.51
4051 6655 6.014584 TGCACGGGAACACTATCAGATATATT 60.015 38.462 0.00 0.00 0.00 1.28
4052 6656 5.480422 TGCACGGGAACACTATCAGATATAT 59.520 40.000 0.00 0.00 0.00 0.86
4072 6676 3.240069 GCATTGAATGAAGTGAGTGCAC 58.760 45.455 9.40 9.40 45.49 4.57
4077 6681 5.765176 TGTTTCTGCATTGAATGAAGTGAG 58.235 37.500 12.70 0.00 37.22 3.51
4103 6707 7.372451 TGCAAGTAATCATGTAACCAGTAAC 57.628 36.000 0.00 0.00 0.00 2.50
4145 6749 9.911788 ATCCACTGATACAAGAAATAAAGATGT 57.088 29.630 0.00 0.00 0.00 3.06
4165 6793 2.260822 AGCAGGTGTAACAGATCCACT 58.739 47.619 0.00 0.00 39.98 4.00
4166 6794 2.770164 AGCAGGTGTAACAGATCCAC 57.230 50.000 0.00 0.00 39.98 4.02
4167 6795 3.411446 CAAAGCAGGTGTAACAGATCCA 58.589 45.455 0.00 0.00 39.98 3.41
4168 6796 2.162408 GCAAAGCAGGTGTAACAGATCC 59.838 50.000 0.00 0.00 39.98 3.36
4169 6797 2.813754 TGCAAAGCAGGTGTAACAGATC 59.186 45.455 0.00 0.00 32.85 2.75
4170 6798 2.862541 TGCAAAGCAGGTGTAACAGAT 58.137 42.857 0.00 0.00 32.85 2.90
4171 6799 2.340210 TGCAAAGCAGGTGTAACAGA 57.660 45.000 0.00 0.00 32.85 3.41
4172 6800 4.156556 ACATATGCAAAGCAGGTGTAACAG 59.843 41.667 1.58 0.00 43.65 3.16
4173 6801 4.078537 ACATATGCAAAGCAGGTGTAACA 58.921 39.130 1.58 0.00 43.65 2.41
4174 6802 4.701956 ACATATGCAAAGCAGGTGTAAC 57.298 40.909 1.58 0.00 43.65 2.50
4175 6803 7.403312 AATAACATATGCAAAGCAGGTGTAA 57.597 32.000 1.58 0.00 43.65 2.41
4176 6804 8.690203 ATAATAACATATGCAAAGCAGGTGTA 57.310 30.769 1.58 0.00 43.65 2.90
4177 6805 5.920193 AATAACATATGCAAAGCAGGTGT 57.080 34.783 1.58 2.38 43.65 4.16
4221 6849 4.021456 TGTGAAGTCGAATATGGTGTGAGT 60.021 41.667 0.00 0.00 0.00 3.41
4222 6850 4.494484 TGTGAAGTCGAATATGGTGTGAG 58.506 43.478 0.00 0.00 0.00 3.51
4223 6851 4.529109 TGTGAAGTCGAATATGGTGTGA 57.471 40.909 0.00 0.00 0.00 3.58
4224 6852 5.179368 ACTTTGTGAAGTCGAATATGGTGTG 59.821 40.000 0.00 0.00 42.35 3.82
4225 6853 5.179368 CACTTTGTGAAGTCGAATATGGTGT 59.821 40.000 0.00 0.00 44.14 4.16
4226 6854 5.621422 CACTTTGTGAAGTCGAATATGGTG 58.379 41.667 0.00 0.00 44.14 4.17
4227 6855 4.154195 GCACTTTGTGAAGTCGAATATGGT 59.846 41.667 1.52 0.00 44.14 3.55
4228 6856 4.393062 AGCACTTTGTGAAGTCGAATATGG 59.607 41.667 1.52 0.00 44.14 2.74
4243 6871 4.843220 AACAGAATCCTCAAGCACTTTG 57.157 40.909 0.00 0.00 38.17 2.77
4269 6897 4.688021 TGGTCCAAACATTTTGCTACAAC 58.312 39.130 0.00 0.00 0.00 3.32
4293 6921 1.667724 GCATACACCTGTAAGCAGCAG 59.332 52.381 7.60 0.00 42.70 4.24
4317 6945 9.640952 ACTTTAGGCCATACATTACAATACAAT 57.359 29.630 5.01 0.00 0.00 2.71
4358 6986 3.569194 TCAACAAAGGTAACCTGCTCA 57.431 42.857 0.00 0.00 32.13 4.26
4414 7042 3.119743 TCTCTGAGCCAATTTTGCGATTG 60.120 43.478 0.00 1.51 36.89 2.67
4430 7058 5.365025 CCTTGGATTGATAAGGACTCTCTGA 59.635 44.000 0.00 0.00 44.98 3.27
4449 7077 6.349611 CCAGTGTGATAGTCAATTTTCCTTGG 60.350 42.308 0.00 0.00 0.00 3.61
4636 7267 3.057315 CCTTCGTTTTGGCATCAATGAGT 60.057 43.478 0.00 0.00 32.28 3.41
4714 7345 5.373222 AGAACTGCAATTGTAACACCTGTA 58.627 37.500 7.40 0.00 0.00 2.74
4715 7346 4.207165 AGAACTGCAATTGTAACACCTGT 58.793 39.130 7.40 0.00 0.00 4.00
4738 7369 8.204903 TGTACCCTAGTAAAAACATAACCAGA 57.795 34.615 0.00 0.00 0.00 3.86
4743 7374 9.796180 ATGTGTTGTACCCTAGTAAAAACATAA 57.204 29.630 0.00 1.44 38.53 1.90
4774 7405 9.102757 TCACAAGATGATAGAAATAGTCAAAGC 57.897 33.333 0.00 0.00 29.99 3.51
4862 7493 8.946085 AGCAAGAATCGTCAAAATAAATAGTCA 58.054 29.630 0.00 0.00 0.00 3.41
4879 7510 9.713740 CTTACATGAATGAACTAAGCAAGAATC 57.286 33.333 0.00 0.00 0.00 2.52
4959 7591 4.338118 CACCTACACACACAAATTTCCACT 59.662 41.667 0.00 0.00 0.00 4.00
4960 7592 4.499019 CCACCTACACACACAAATTTCCAC 60.499 45.833 0.00 0.00 0.00 4.02
4961 7593 3.634448 CCACCTACACACACAAATTTCCA 59.366 43.478 0.00 0.00 0.00 3.53
4985 7617 0.181114 CAGTGGCTATAAGGGCTGCA 59.819 55.000 0.50 0.00 0.00 4.41
5023 7655 1.613437 CATTTTCCAAGCCAAGTCCGT 59.387 47.619 0.00 0.00 0.00 4.69
5062 7694 5.251764 ACTGCAGCATTTTCTTCTGATAGT 58.748 37.500 15.27 0.00 0.00 2.12
5207 7839 8.389603 CAATTGTTCAGTGTAGCAATTTGTTTT 58.610 29.630 14.64 0.00 38.86 2.43
5218 7850 4.641396 TGGGAGACAATTGTTCAGTGTAG 58.359 43.478 13.36 0.00 32.50 2.74
5235 7867 2.350458 CCAAACGGGCCATTGGGAG 61.350 63.158 23.87 5.19 41.93 4.30
5259 7891 6.406370 GGCACCTACAGCATATCATATGTTA 58.594 40.000 6.52 0.00 0.00 2.41
5273 7905 4.798387 GCAAAATAAATTCGGCACCTACAG 59.202 41.667 0.00 0.00 0.00 2.74
5399 8031 4.743018 GCAACCAGCACCCATAGT 57.257 55.556 0.00 0.00 44.79 2.12
5560 8192 7.891183 AGACAGAACTAGGAGTTAAGATCTTCA 59.109 37.037 12.24 0.00 38.80 3.02
5563 8195 7.672239 ACAAGACAGAACTAGGAGTTAAGATCT 59.328 37.037 0.00 0.00 38.80 2.75
5689 8322 6.534793 GCTGGTCAAATGTTTTTCTCTTTTCA 59.465 34.615 0.00 0.00 0.00 2.69
5705 8338 1.454201 TTCAACACACGCTGGTCAAA 58.546 45.000 0.00 0.00 0.00 2.69
5712 8345 2.551887 TGCAACATATTCAACACACGCT 59.448 40.909 0.00 0.00 0.00 5.07
5714 8347 2.910482 GCTGCAACATATTCAACACACG 59.090 45.455 0.00 0.00 0.00 4.49
5758 8391 4.755123 ACACTTACCTCAAATCCTTCGTTG 59.245 41.667 0.00 0.00 0.00 4.10
5794 8427 4.479786 AGCTTTTGTGTTGGCCTTAAAA 57.520 36.364 3.32 3.90 0.00 1.52
5870 8503 8.715191 TGAAAACAATGCAACAAGTAGAAAAT 57.285 26.923 0.00 0.00 0.00 1.82
5904 8537 1.273327 GCAAAACTGTGATCCCCAAGG 59.727 52.381 0.00 0.00 0.00 3.61
5907 8540 1.894466 CATGCAAAACTGTGATCCCCA 59.106 47.619 0.00 0.00 0.00 4.96
5924 8557 1.881324 TGTCAGTGGATGCAACACATG 59.119 47.619 22.06 17.13 39.84 3.21
5925 8558 2.275134 TGTCAGTGGATGCAACACAT 57.725 45.000 22.06 8.62 43.54 3.21
5926 8559 2.275134 ATGTCAGTGGATGCAACACA 57.725 45.000 22.06 7.03 41.21 3.72
5927 8560 4.970662 AATATGTCAGTGGATGCAACAC 57.029 40.909 14.93 14.93 39.10 3.32
5928 8561 5.476254 TCAAAATATGTCAGTGGATGCAACA 59.524 36.000 0.00 0.00 0.00 3.33
5929 8562 5.953183 TCAAAATATGTCAGTGGATGCAAC 58.047 37.500 0.00 0.00 0.00 4.17
5956 8589 8.696302 ATCTACAAAGAGGGACAAACATTGTCG 61.696 40.741 14.92 4.47 46.80 4.35
5978 8611 4.816925 CGTGTCAGGTCTGTAGATCATCTA 59.183 45.833 0.00 0.00 0.00 1.98
5990 8623 1.645710 ATTTCTCCCGTGTCAGGTCT 58.354 50.000 0.00 0.00 0.00 3.85
6037 8670 1.145598 ATGGATGAGGTCAGCAGCG 59.854 57.895 0.00 0.00 33.17 5.18
6105 8738 7.237982 TGGAAAGGAGTGAAGGAAAATATCAA 58.762 34.615 0.00 0.00 0.00 2.57
6111 8744 5.208121 ACAATGGAAAGGAGTGAAGGAAAA 58.792 37.500 0.00 0.00 0.00 2.29
6115 8748 5.335976 GCTAAACAATGGAAAGGAGTGAAGG 60.336 44.000 0.00 0.00 0.00 3.46
6116 8749 5.241506 TGCTAAACAATGGAAAGGAGTGAAG 59.758 40.000 0.00 0.00 0.00 3.02
6118 8751 4.724399 TGCTAAACAATGGAAAGGAGTGA 58.276 39.130 0.00 0.00 0.00 3.41
6119 8752 4.520492 ACTGCTAAACAATGGAAAGGAGTG 59.480 41.667 4.85 0.00 37.45 3.51
6161 8796 2.185867 GCGTGGTGGAGGCGATTA 59.814 61.111 0.00 0.00 0.00 1.75
6162 8797 3.958147 CTGCGTGGTGGAGGCGATT 62.958 63.158 0.00 0.00 38.36 3.34
6163 8798 4.457496 CTGCGTGGTGGAGGCGAT 62.457 66.667 0.00 0.00 38.36 4.58
6169 8804 0.759959 TTAAGTTCCTGCGTGGTGGA 59.240 50.000 0.00 0.00 37.07 4.02
6170 8805 1.156736 CTTAAGTTCCTGCGTGGTGG 58.843 55.000 0.00 0.00 37.07 4.61
6172 8807 0.396811 AGCTTAAGTTCCTGCGTGGT 59.603 50.000 4.02 0.00 37.07 4.16
6173 8808 1.197721 CAAGCTTAAGTTCCTGCGTGG 59.802 52.381 0.00 0.00 32.82 4.94
6174 8809 1.400242 GCAAGCTTAAGTTCCTGCGTG 60.400 52.381 0.00 0.00 37.81 5.34
6175 8810 0.875059 GCAAGCTTAAGTTCCTGCGT 59.125 50.000 0.00 0.00 0.00 5.24
6176 8811 1.135859 CAGCAAGCTTAAGTTCCTGCG 60.136 52.381 0.00 3.21 0.00 5.18
6198 8833 2.101249 GGATAATGTTGGGTGTGCATGG 59.899 50.000 0.00 0.00 0.00 3.66
6225 8860 1.125202 GCTTTGAAGAGTTCGTCGAGC 59.875 52.381 0.13 0.13 32.67 5.03
6298 8933 1.028868 GCTGTTCAGAGTCATGGCCC 61.029 60.000 0.00 0.00 0.00 5.80
6542 9177 5.442391 TGTGTAACTATATTTTCCCTGGGC 58.558 41.667 8.22 0.00 38.04 5.36
6554 9189 8.537049 AACACGCTACAAAATGTGTAACTATA 57.463 30.769 0.00 0.00 44.23 1.31
6592 9227 3.563261 CCAAATCACCACCCCATGACTAA 60.563 47.826 0.00 0.00 0.00 2.24
6593 9228 2.025416 CCAAATCACCACCCCATGACTA 60.025 50.000 0.00 0.00 0.00 2.59
6594 9229 1.272648 CCAAATCACCACCCCATGACT 60.273 52.381 0.00 0.00 0.00 3.41
6675 9310 3.342269 CGACAACGCCGATTATTTGAAG 58.658 45.455 0.00 0.00 0.00 3.02
6693 9328 2.536803 TCTTAAAATACATCGCGGCGAC 59.463 45.455 28.88 0.11 39.18 5.19
6701 9336 8.256611 TGAACTGAGCAGTCTTAAAATACATC 57.743 34.615 3.27 0.00 41.58 3.06
6722 9358 3.257469 TCAGACATCATCCTGCTGAAC 57.743 47.619 0.00 0.00 33.11 3.18
6724 9360 3.986996 TTTCAGACATCATCCTGCTGA 57.013 42.857 0.00 0.00 34.11 4.26
6725 9361 4.259356 TCTTTTCAGACATCATCCTGCTG 58.741 43.478 0.00 0.00 0.00 4.41
6726 9362 4.564782 TCTTTTCAGACATCATCCTGCT 57.435 40.909 0.00 0.00 0.00 4.24
6727 9363 4.699257 ACTTCTTTTCAGACATCATCCTGC 59.301 41.667 0.00 0.00 0.00 4.85
6728 9364 6.814506 AACTTCTTTTCAGACATCATCCTG 57.185 37.500 0.00 0.00 0.00 3.86
6729 9365 6.294397 GCAAACTTCTTTTCAGACATCATCCT 60.294 38.462 0.00 0.00 0.00 3.24
6730 9366 5.860716 GCAAACTTCTTTTCAGACATCATCC 59.139 40.000 0.00 0.00 0.00 3.51
6731 9367 6.441274 TGCAAACTTCTTTTCAGACATCATC 58.559 36.000 0.00 0.00 0.00 2.92
6732 9368 6.395426 TGCAAACTTCTTTTCAGACATCAT 57.605 33.333 0.00 0.00 0.00 2.45
6769 9405 5.107298 GCAGTACTTAAGACAGCAGAGTTTG 60.107 44.000 10.09 0.00 30.32 2.93
6899 9539 8.691661 AGTATGTTTTACAAATCAAGTCCACT 57.308 30.769 0.00 0.00 0.00 4.00
6913 9553 6.282199 TGAGACAGAGGGAGTATGTTTTAC 57.718 41.667 0.00 0.00 27.90 2.01
6914 9554 8.603898 TTATGAGACAGAGGGAGTATGTTTTA 57.396 34.615 0.00 0.00 27.90 1.52
6915 9555 7.496346 TTATGAGACAGAGGGAGTATGTTTT 57.504 36.000 0.00 0.00 27.90 2.43
6922 9562 9.836179 ATTCTTATATTATGAGACAGAGGGAGT 57.164 33.333 0.00 0.00 0.00 3.85
6924 9564 9.607333 ACATTCTTATATTATGAGACAGAGGGA 57.393 33.333 0.00 0.00 0.00 4.20
6953 9593 9.044150 CCGTCCCATAATATAAGAACGTTTAAA 57.956 33.333 0.46 0.00 0.00 1.52
6954 9594 8.420222 TCCGTCCCATAATATAAGAACGTTTAA 58.580 33.333 0.46 0.00 0.00 1.52
6955 9595 7.950512 TCCGTCCCATAATATAAGAACGTTTA 58.049 34.615 0.46 0.00 0.00 2.01
6956 9596 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
6957 9597 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
6958 9598 5.566230 GCTCCGTCCCATAATATAAGAACGT 60.566 44.000 0.00 0.00 0.00 3.99
6959 9599 4.863131 GCTCCGTCCCATAATATAAGAACG 59.137 45.833 0.00 0.00 0.00 3.95
6960 9600 4.863131 CGCTCCGTCCCATAATATAAGAAC 59.137 45.833 0.00 0.00 0.00 3.01
6961 9601 4.768448 TCGCTCCGTCCCATAATATAAGAA 59.232 41.667 0.00 0.00 0.00 2.52
6962 9602 4.338012 TCGCTCCGTCCCATAATATAAGA 58.662 43.478 0.00 0.00 0.00 2.10
6963 9603 4.158025 ACTCGCTCCGTCCCATAATATAAG 59.842 45.833 0.00 0.00 0.00 1.73
6964 9604 4.084287 ACTCGCTCCGTCCCATAATATAA 58.916 43.478 0.00 0.00 0.00 0.98
6965 9605 3.693807 ACTCGCTCCGTCCCATAATATA 58.306 45.455 0.00 0.00 0.00 0.86
6966 9606 2.526432 ACTCGCTCCGTCCCATAATAT 58.474 47.619 0.00 0.00 0.00 1.28
6967 9607 1.991121 ACTCGCTCCGTCCCATAATA 58.009 50.000 0.00 0.00 0.00 0.98
6968 9608 1.991121 TACTCGCTCCGTCCCATAAT 58.009 50.000 0.00 0.00 0.00 1.28
6969 9609 1.766494 TTACTCGCTCCGTCCCATAA 58.234 50.000 0.00 0.00 0.00 1.90
6970 9610 1.991121 ATTACTCGCTCCGTCCCATA 58.009 50.000 0.00 0.00 0.00 2.74
6971 9611 1.120530 AATTACTCGCTCCGTCCCAT 58.879 50.000 0.00 0.00 0.00 4.00
6972 9612 1.406539 GTAATTACTCGCTCCGTCCCA 59.593 52.381 8.41 0.00 0.00 4.37
6973 9613 1.680207 AGTAATTACTCGCTCCGTCCC 59.320 52.381 12.50 0.00 0.00 4.46
6974 9614 4.558538 TTAGTAATTACTCGCTCCGTCC 57.441 45.455 21.25 0.00 37.73 4.79
6975 9615 8.739649 AAATATTAGTAATTACTCGCTCCGTC 57.260 34.615 21.25 0.00 37.73 4.79
6976 9616 9.617975 GTAAATATTAGTAATTACTCGCTCCGT 57.382 33.333 21.25 6.16 37.73 4.69
6977 9617 9.837525 AGTAAATATTAGTAATTACTCGCTCCG 57.162 33.333 21.25 0.00 33.33 4.63
7016 9844 3.101437 TCAATTAGGGACAGCTTACGGA 58.899 45.455 0.00 0.00 0.00 4.69
7080 9974 9.391006 TCTTGGTGTAATGACATTTATCTTACC 57.609 33.333 5.89 7.01 38.04 2.85
7156 10050 7.181125 ACAGAGGGAGTACAAACTTCTATTGAT 59.819 37.037 0.00 0.00 35.56 2.57
7174 10068 7.589958 TGCAAAGTAAATAAAAACAGAGGGA 57.410 32.000 0.00 0.00 0.00 4.20
7191 10085 9.236006 ACTTCAGTCAATTCTAATATGCAAAGT 57.764 29.630 0.00 0.00 0.00 2.66
7192 10086 9.713740 GACTTCAGTCAATTCTAATATGCAAAG 57.286 33.333 1.86 0.00 44.18 2.77
7341 10235 4.918810 AGCTTTACAAACTTGGACCAAG 57.081 40.909 29.13 29.13 45.85 3.61
7342 10236 6.378848 AGTTAAGCTTTACAAACTTGGACCAA 59.621 34.615 17.19 6.76 0.00 3.67
7343 10237 5.889289 AGTTAAGCTTTACAAACTTGGACCA 59.111 36.000 17.19 0.00 0.00 4.02
7344 10238 6.387041 AGTTAAGCTTTACAAACTTGGACC 57.613 37.500 17.19 0.00 0.00 4.46
7345 10239 7.971722 TCAAAGTTAAGCTTTACAAACTTGGAC 59.028 33.333 20.41 0.00 44.95 4.02
7346 10240 7.971722 GTCAAAGTTAAGCTTTACAAACTTGGA 59.028 33.333 20.41 19.80 44.95 3.53
7347 10241 7.222031 GGTCAAAGTTAAGCTTTACAAACTTGG 59.778 37.037 20.41 18.27 44.95 3.61
7348 10242 7.757624 TGGTCAAAGTTAAGCTTTACAAACTTG 59.242 33.333 20.41 15.20 44.95 3.16
7349 10243 7.832769 TGGTCAAAGTTAAGCTTTACAAACTT 58.167 30.769 17.19 16.55 44.95 2.66
7350 10244 7.399245 TGGTCAAAGTTAAGCTTTACAAACT 57.601 32.000 17.19 11.77 44.95 2.66
7351 10245 8.468720 TTTGGTCAAAGTTAAGCTTTACAAAC 57.531 30.769 17.19 9.70 44.95 2.93
7352 10246 8.696410 CTTTGGTCAAAGTTAAGCTTTACAAA 57.304 30.769 17.19 6.66 44.95 2.83
7353 10247 7.363443 AGCTTTGGTCAAAGTTAAGCTTTACAA 60.363 33.333 17.19 0.00 46.76 2.41
7354 10248 6.096282 AGCTTTGGTCAAAGTTAAGCTTTACA 59.904 34.615 17.19 0.00 46.76 2.41
7355 10249 6.504398 AGCTTTGGTCAAAGTTAAGCTTTAC 58.496 36.000 20.33 5.73 46.76 2.01
7356 10250 6.709018 AGCTTTGGTCAAAGTTAAGCTTTA 57.291 33.333 20.33 0.00 46.76 1.85
7357 10251 5.598416 AGCTTTGGTCAAAGTTAAGCTTT 57.402 34.783 20.33 0.00 46.76 3.51
7358 10252 6.709018 TTAGCTTTGGTCAAAGTTAAGCTT 57.291 33.333 20.77 3.48 46.76 3.74
7367 10261 5.414454 AGTTCGCATATTAGCTTTGGTCAAA 59.586 36.000 0.00 0.00 0.00 2.69
7368 10262 4.941263 AGTTCGCATATTAGCTTTGGTCAA 59.059 37.500 0.00 0.00 0.00 3.18
7369 10263 4.513442 AGTTCGCATATTAGCTTTGGTCA 58.487 39.130 0.00 0.00 0.00 4.02
7370 10264 6.598753 TTAGTTCGCATATTAGCTTTGGTC 57.401 37.500 0.00 0.00 0.00 4.02
7371 10265 6.995511 TTTAGTTCGCATATTAGCTTTGGT 57.004 33.333 0.00 0.00 0.00 3.67
7372 10266 9.944663 TTTATTTAGTTCGCATATTAGCTTTGG 57.055 29.630 0.00 0.00 0.00 3.28
7380 10274 9.965824 CCTCCATTTTTATTTAGTTCGCATATT 57.034 29.630 0.00 0.00 0.00 1.28
7381 10275 8.576442 CCCTCCATTTTTATTTAGTTCGCATAT 58.424 33.333 0.00 0.00 0.00 1.78
7382 10276 7.776030 TCCCTCCATTTTTATTTAGTTCGCATA 59.224 33.333 0.00 0.00 0.00 3.14
7383 10277 6.605594 TCCCTCCATTTTTATTTAGTTCGCAT 59.394 34.615 0.00 0.00 0.00 4.73
7384 10278 5.946972 TCCCTCCATTTTTATTTAGTTCGCA 59.053 36.000 0.00 0.00 0.00 5.10
7385 10279 6.095021 ACTCCCTCCATTTTTATTTAGTTCGC 59.905 38.462 0.00 0.00 0.00 4.70
7386 10280 7.625828 ACTCCCTCCATTTTTATTTAGTTCG 57.374 36.000 0.00 0.00 0.00 3.95
7387 10281 8.900781 GGTACTCCCTCCATTTTTATTTAGTTC 58.099 37.037 0.00 0.00 0.00 3.01
7388 10282 8.621073 AGGTACTCCCTCCATTTTTATTTAGTT 58.379 33.333 0.00 0.00 40.71 2.24
7389 10283 8.171337 AGGTACTCCCTCCATTTTTATTTAGT 57.829 34.615 0.00 0.00 40.71 2.24
7394 10288 9.684702 TCTATTAGGTACTCCCTCCATTTTTAT 57.315 33.333 0.00 0.00 44.81 1.40
7395 10289 9.155785 CTCTATTAGGTACTCCCTCCATTTTTA 57.844 37.037 0.00 0.00 44.81 1.52
7396 10290 7.849904 TCTCTATTAGGTACTCCCTCCATTTTT 59.150 37.037 0.00 0.00 44.81 1.94
7397 10291 7.371043 TCTCTATTAGGTACTCCCTCCATTTT 58.629 38.462 0.00 0.00 44.81 1.82
7398 10292 6.935036 TCTCTATTAGGTACTCCCTCCATTT 58.065 40.000 0.00 0.00 44.81 2.32
7399 10293 6.469533 CCTCTCTATTAGGTACTCCCTCCATT 60.470 46.154 0.00 0.00 44.81 3.16
7400 10294 5.015817 CCTCTCTATTAGGTACTCCCTCCAT 59.984 48.000 0.00 0.00 44.81 3.41
7401 10295 4.354387 CCTCTCTATTAGGTACTCCCTCCA 59.646 50.000 0.00 0.00 44.81 3.86
7402 10296 4.602732 TCCTCTCTATTAGGTACTCCCTCC 59.397 50.000 0.00 0.00 44.81 4.30
7403 10297 5.073417 TGTCCTCTCTATTAGGTACTCCCTC 59.927 48.000 0.00 0.00 44.81 4.30
7405 10299 5.321934 TGTCCTCTCTATTAGGTACTCCC 57.678 47.826 0.00 0.00 41.75 4.30
7406 10300 6.040729 GGTTTGTCCTCTCTATTAGGTACTCC 59.959 46.154 0.00 0.00 41.75 3.85
7407 10301 6.606395 TGGTTTGTCCTCTCTATTAGGTACTC 59.394 42.308 0.00 0.00 37.15 2.59
7408 10302 6.500336 TGGTTTGTCCTCTCTATTAGGTACT 58.500 40.000 0.00 0.00 38.94 2.73
7409 10303 6.380560 ACTGGTTTGTCCTCTCTATTAGGTAC 59.619 42.308 0.00 0.00 35.48 3.34
7410 10304 6.380274 CACTGGTTTGTCCTCTCTATTAGGTA 59.620 42.308 0.00 0.00 35.48 3.08
7411 10305 5.187967 CACTGGTTTGTCCTCTCTATTAGGT 59.812 44.000 0.00 0.00 35.48 3.08
7412 10306 5.187967 ACACTGGTTTGTCCTCTCTATTAGG 59.812 44.000 0.00 0.00 37.07 2.69
7413 10307 6.287589 ACACTGGTTTGTCCTCTCTATTAG 57.712 41.667 0.00 0.00 37.07 1.73
7414 10308 6.681729 AACACTGGTTTGTCCTCTCTATTA 57.318 37.500 0.00 0.00 31.83 0.98
7415 10309 5.568620 AACACTGGTTTGTCCTCTCTATT 57.431 39.130 0.00 0.00 31.83 1.73
7422 10316 4.595781 TGTCCTATAACACTGGTTTGTCCT 59.404 41.667 0.00 0.00 38.45 3.85
7429 10323 8.520351 GCTTTATTTTTGTCCTATAACACTGGT 58.480 33.333 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.