AutoCloner

Multiple sequence alignment - TraesCS1B01G122700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS1B01G122700	chr1B	100.000	3473	0	0	1	3473	148409844	148413316	0.000000e+00	6414.0
1	TraesCS1B01G122700	chr1B	84.857	350	47	6	3	350	641686884	641687229	7.130000e-92	348.0
2	TraesCS1B01G122700	chr1B	97.849	186	3	1	551	736	148410210	148410394	1.560000e-83	320.0
3	TraesCS1B01G122700	chr1B	97.849	186	3	1	367	551	148410394	148410579	1.560000e-83	320.0
4	TraesCS1B01G122700	chr1D	94.311	2549	119	14	942	3473	93099649	93102188	0.000000e+00	3880.0
5	TraesCS1B01G122700	chr1D	91.837	49	3	1	780	828	93099555	93099602	2.240000e-07	67.6
6	TraesCS1B01G122700	chr1A	94.500	2382	110	13	950	3322	90157691	90160060	0.000000e+00	3653.0
7	TraesCS1B01G122700	chr1A	96.753	154	5	0	3319	3472	90160371	90160524	1.240000e-64	257.0
8	TraesCS1B01G122700	chr1A	89.362	188	16	4	344	529	7796492	7796677	2.080000e-57	233.0
9	TraesCS1B01G122700	chr1A	90.419	167	13	3	551	716	7796515	7796679	2.100000e-52	217.0
10	TraesCS1B01G122700	chr2A	88.571	350	35	4	3	350	459502313	459502659	1.490000e-113	420.0
11	TraesCS1B01G122700	chr2A	87.931	348	38	4	3	348	459529119	459529464	1.160000e-109	407.0
12	TraesCS1B01G122700	chr2A	87.106	349	42	2	3	350	459441583	459441929	3.250000e-105	392.0
13	TraesCS1B01G122700	chr2A	85.833	360	37	9	3	350	459505439	459505796	1.520000e-98	370.0
14	TraesCS1B01G122700	chr3B	86.364	352	39	8	3	350	176615529	176615875	3.270000e-100	375.0
15	TraesCS1B01G122700	chr6B	85.915	355	37	10	3	350	46270768	46271116	1.970000e-97	366.0
16	TraesCS1B01G122700	chr6B	90.608	181	14	3	351	529	479176604	479176783	1.610000e-58	237.0
17	TraesCS1B01G122700	chr5D	81.375	349	52	7	3	350	32614946	32615282	4.420000e-69	272.0
18	TraesCS1B01G122700	chr5B	91.848	184	10	3	350	529	123426933	123426751	5.750000e-63	252.0
19	TraesCS1B01G122700	chr5B	91.716	169	10	3	551	716	123426916	123426749	7.500000e-57	231.0
20	TraesCS1B01G122700	chr5B	89.881	168	13	4	551	716	212194104	212193939	2.720000e-51	213.0
21	TraesCS1B01G122700	chr2B	90.659	182	13	3	351	529	400343387	400343567	4.480000e-59	239.0
22	TraesCS1B01G122700	chr2B	90.217	184	13	3	350	529	776646248	776646066	5.800000e-58	235.0
23	TraesCS1B01G122700	chr2B	89.840	187	12	4	349	529	776641143	776640958	2.080000e-57	233.0
24	TraesCS1B01G122700	chr2B	87.879	198	21	3	351	545	10355241	10355044	2.700000e-56	230.0
25	TraesCS1B01G122700	chr2B	90.643	171	14	2	562	730	10355214	10355044	3.490000e-55	226.0
26	TraesCS1B01G122700	chr2B	89.881	168	14	3	551	716	400343403	400343569	2.720000e-51	213.0
27	TraesCS1B01G122700	chr2B	89.881	168	11	3	554	716	776641122	776640956	9.770000e-51	211.0
28	TraesCS1B01G122700	chr6D	90.217	184	12	4	350	529	232770562	232770743	5.800000e-58	235.0
29	TraesCS1B01G122700	chr6D	89.349	169	13	4	551	716	232770579	232770745	1.260000e-49	207.0
30	TraesCS1B01G122700	chr6D	97.619	42	1	0	731	772	53611740	53611699	4.810000e-09	73.1
31	TraesCS1B01G122700	chr6D	97.619	42	1	0	731	772	77862439	77862480	4.810000e-09	73.1
32	TraesCS1B01G122700	chr3A	78.779	344	57	12	3	340	704975445	704975112	2.100000e-52	217.0
33	TraesCS1B01G122700	chr3A	83.051	118	19	1	234	350	677837224	677837107	4.740000e-19	106.0
34	TraesCS1B01G122700	chr4B	89.349	169	14	3	551	716	1754996	1755163	3.510000e-50	209.0
35	TraesCS1B01G122700	chr6A	82.645	121	20	1	231	350	119296597	119296717	4.740000e-19	106.0
36	TraesCS1B01G122700	chr7B	100.000	42	0	0	731	772	403409615	403409574	1.030000e-10	78.7
37	TraesCS1B01G122700	chr3D	100.000	42	0	0	731	772	436230317	436230276	1.030000e-10	78.7
38	TraesCS1B01G122700	chrUn	97.619	42	1	0	731	772	41707591	41707550	4.810000e-09	73.1
39	TraesCS1B01G122700	chrUn	97.619	42	1	0	731	772	41739389	41739348	4.810000e-09	73.1
40	TraesCS1B01G122700	chrUn	97.619	42	1	0	731	772	342264355	342264396	4.810000e-09	73.1
41	TraesCS1B01G122700	chrUn	97.619	42	1	0	731	772	342264816	342264857	4.810000e-09	73.1
42	TraesCS1B01G122700	chrUn	97.619	42	1	0	731	772	342265277	342265318	4.810000e-09	73.1

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS1B01G122700	chr1B	148409844	148413316	3472	False	2351.333333	6414	98.5660	1	3473	3	chr1B.!!$F2	3472
1	TraesCS1B01G122700	chr1D	93099555	93102188	2633	False	1973.800000	3880	93.0740	780	3473	2	chr1D.!!$F1	2693
2	TraesCS1B01G122700	chr1A	90157691	90160524	2833	False	1955.000000	3653	95.6265	950	3472	2	chr1A.!!$F2	2522
3	TraesCS1B01G122700	chr2A	459502313	459505796	3483	False	395.000000	420	87.2020	3	350	2	chr2A.!!$F3	347

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
194	196	0.034337	AATCGTGTGGCACTTACCGT	59.966	50.0	19.83	4.52	31.34	4.83	F
373	3512	0.037447	GAGACTTGCCTGCTCCCTTT	59.963	55.0	0.00	0.00	0.00	3.11	F
374	3513	0.037447	AGACTTGCCTGCTCCCTTTC	59.963	55.0	0.00	0.00	0.00	2.62	F
1236	4382	0.041238	TCTCCTGGACGTCCCTCATT	59.959	55.0	31.19	0.00	35.38	2.57	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1269	4415	0.244994	GCCTCAGAAGTGCGAGAGAA	59.755	55.000	0.00	0.00	2.87	R
2130	5276	1.131883	GCAGCAATGCTCGACTCAAAT	59.868	47.619	4.03	36.40	2.32	R
2221	5367	3.621558	TCTCTGGATCAAGCTCGAGTAA	58.378	45.455	15.13	0.00	2.24	R
2672	5819	1.155889	CACACATAAGCAAGTCGCCA	58.844	50.000	0.00	44.04	5.69	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
141	143	9.973246	ATTCACAAATATAATAAATAGAGCGCG	57.027	29.630	0.00	0.00	0.00	6.86
145	147	8.581263	ACAAATATAATAAATAGAGCGCGTACG	58.419	33.333	11.84	11.84	44.07	3.67
157	159	1.391144	GCGCGTACGTTGGTTCTTAAT	59.609	47.619	17.90	0.00	42.83	1.40
159	161	3.301388	GCGCGTACGTTGGTTCTTAATAG	60.301	47.826	17.90	0.00	42.83	1.73
173	175	3.558418	TCTTAATAGTTTCGCGGCCATTC	59.442	43.478	6.13	0.00	0.00	2.67
176	178	2.676632	TAGTTTCGCGGCCATTCTAA	57.323	45.000	6.13	0.00	0.00	2.10
182	184	1.151777	CGCGGCCATTCTAATCGTGT	61.152	55.000	2.24	0.00	0.00	4.49
183	185	0.304705	GCGGCCATTCTAATCGTGTG	59.695	55.000	2.24	0.00	0.00	3.82
194	196	0.034337	AATCGTGTGGCACTTACCGT	59.966	50.000	19.83	4.52	31.34	4.83
198	200	1.301401	TGTGGCACTTACCGTCTGC	60.301	57.895	19.83	0.00	0.00	4.26
199	201	1.004918	GTGGCACTTACCGTCTGCT	60.005	57.895	11.13	0.00	0.00	4.24
215	217	4.552767	CGTCTGCTGTGGTTAAGAAAACTG	60.553	45.833	0.00	0.00	0.00	3.16
218	220	5.417580	TCTGCTGTGGTTAAGAAAACTGTTT	59.582	36.000	0.00	0.00	0.00	2.83
220	222	5.866633	TGCTGTGGTTAAGAAAACTGTTTTG	59.133	36.000	22.06	5.89	31.94	2.44
226	228	6.869388	TGGTTAAGAAAACTGTTTTGGTGTTC	59.131	34.615	22.06	7.64	32.69	3.18
230	232	4.220602	AGAAAACTGTTTTGGTGTTCTGCT	59.779	37.500	22.06	7.58	39.11	4.24
247	3385	3.635734	CTTGCAAGGCGCGAGTTCG	62.636	63.158	19.14	0.00	45.87	3.95
255	3393	1.733399	GCGCGAGTTCGAGTCCTTT	60.733	57.895	12.10	0.00	43.02	3.11
261	3399	2.260481	GAGTTCGAGTCCTTTTAGCCG	58.740	52.381	0.00	0.00	0.00	5.52
307	3446	2.749621	AGGCATTTTTCCTTCTACTGCG	59.250	45.455	0.00	0.00	0.00	5.18
308	3447	2.488153	GGCATTTTTCCTTCTACTGCGT	59.512	45.455	0.00	0.00	0.00	5.24
359	3498	4.521062	GCGCCAGCGGATGAGACT	62.521	66.667	14.63	0.00	40.19	3.24
360	3499	2.185350	CGCCAGCGGATGAGACTT	59.815	61.111	3.61	0.00	35.56	3.01
361	3500	2.169789	CGCCAGCGGATGAGACTTG	61.170	63.158	3.61	0.00	35.56	3.16
362	3501	2.467826	GCCAGCGGATGAGACTTGC	61.468	63.158	0.00	0.00	0.00	4.01
363	3502	1.817099	CCAGCGGATGAGACTTGCC	60.817	63.158	0.00	0.00	0.00	4.52
364	3503	1.220206	CAGCGGATGAGACTTGCCT	59.780	57.895	0.00	0.00	0.00	4.75
365	3504	1.088340	CAGCGGATGAGACTTGCCTG	61.088	60.000	0.00	0.00	0.00	4.85
366	3505	2.467826	GCGGATGAGACTTGCCTGC	61.468	63.158	0.00	0.00	0.00	4.85
367	3506	1.220206	CGGATGAGACTTGCCTGCT	59.780	57.895	0.00	0.00	0.00	4.24
368	3507	0.809241	CGGATGAGACTTGCCTGCTC	60.809	60.000	0.00	0.00	0.00	4.26
369	3508	0.463474	GGATGAGACTTGCCTGCTCC	60.463	60.000	0.00	0.00	0.00	4.70
370	3509	0.463474	GATGAGACTTGCCTGCTCCC	60.463	60.000	0.00	0.00	0.00	4.30
371	3510	0.913451	ATGAGACTTGCCTGCTCCCT	60.913	55.000	0.00	0.00	0.00	4.20
372	3511	1.130054	TGAGACTTGCCTGCTCCCTT	61.130	55.000	0.00	0.00	0.00	3.95
373	3512	0.037447	GAGACTTGCCTGCTCCCTTT	59.963	55.000	0.00	0.00	0.00	3.11
374	3513	0.037447	AGACTTGCCTGCTCCCTTTC	59.963	55.000	0.00	0.00	0.00	2.62
375	3514	0.962855	GACTTGCCTGCTCCCTTTCC	60.963	60.000	0.00	0.00	0.00	3.13
376	3515	1.075482	CTTGCCTGCTCCCTTTCCA	59.925	57.895	0.00	0.00	0.00	3.53
377	3516	0.324091	CTTGCCTGCTCCCTTTCCAT	60.324	55.000	0.00	0.00	0.00	3.41
378	3517	0.612732	TTGCCTGCTCCCTTTCCATG	60.613	55.000	0.00	0.00	0.00	3.66
379	3518	2.421399	GCCTGCTCCCTTTCCATGC	61.421	63.158	0.00	0.00	0.00	4.06
380	3519	1.305623	CCTGCTCCCTTTCCATGCT	59.694	57.895	0.00	0.00	0.00	3.79
381	3520	0.750911	CCTGCTCCCTTTCCATGCTC	60.751	60.000	0.00	0.00	0.00	4.26
382	3521	0.750911	CTGCTCCCTTTCCATGCTCC	60.751	60.000	0.00	0.00	0.00	4.70
383	3522	1.454663	GCTCCCTTTCCATGCTCCC	60.455	63.158	0.00	0.00	0.00	4.30
384	3523	2.001803	CTCCCTTTCCATGCTCCCA	58.998	57.895	0.00	0.00	0.00	4.37
385	3524	0.554792	CTCCCTTTCCATGCTCCCAT	59.445	55.000	0.00	0.00	0.00	4.00
386	3525	0.552848	TCCCTTTCCATGCTCCCATC	59.447	55.000	0.00	0.00	0.00	3.51
387	3526	0.468771	CCCTTTCCATGCTCCCATCC	60.469	60.000	0.00	0.00	0.00	3.51
388	3527	0.820891	CCTTTCCATGCTCCCATCCG	60.821	60.000	0.00	0.00	0.00	4.18
389	3528	0.107017	CTTTCCATGCTCCCATCCGT	60.107	55.000	0.00	0.00	0.00	4.69
390	3529	0.394216	TTTCCATGCTCCCATCCGTG	60.394	55.000	0.00	0.00	0.00	4.94
391	3530	2.891941	TTCCATGCTCCCATCCGTGC	62.892	60.000	0.00	0.00	0.00	5.34
392	3531	2.191375	CATGCTCCCATCCGTGCT	59.809	61.111	0.00	0.00	0.00	4.40
393	3532	1.890979	CATGCTCCCATCCGTGCTC	60.891	63.158	0.00	0.00	0.00	4.26
394	3533	3.112205	ATGCTCCCATCCGTGCTCC	62.112	63.158	0.00	0.00	0.00	4.70
395	3534	4.554036	GCTCCCATCCGTGCTCCC	62.554	72.222	0.00	0.00	0.00	4.30
396	3535	4.227134	CTCCCATCCGTGCTCCCG	62.227	72.222	0.00	0.00	0.00	5.14
400	3539	4.201679	CATCCGTGCTCCCGCGTA	62.202	66.667	4.92	0.00	43.11	4.42
401	3540	4.203076	ATCCGTGCTCCCGCGTAC	62.203	66.667	4.92	0.00	43.11	3.67
403	3542	4.508128	CCGTGCTCCCGCGTACAT	62.508	66.667	4.92	0.00	43.11	2.29
404	3543	3.254654	CGTGCTCCCGCGTACATG	61.255	66.667	4.92	0.00	39.95	3.21
405	3544	2.890474	GTGCTCCCGCGTACATGG	60.890	66.667	4.92	0.00	39.65	3.66
406	3545	4.830765	TGCTCCCGCGTACATGGC	62.831	66.667	4.92	1.00	39.65	4.40
407	3546	4.530857	GCTCCCGCGTACATGGCT	62.531	66.667	4.92	0.00	0.00	4.75
408	3547	2.186903	CTCCCGCGTACATGGCTT	59.813	61.111	4.92	0.00	0.00	4.35
409	3548	2.125310	TCCCGCGTACATGGCTTG	60.125	61.111	4.92	0.00	0.00	4.01
410	3549	2.125310	CCCGCGTACATGGCTTGA	60.125	61.111	4.92	0.00	0.00	3.02
411	3550	1.523711	CCCGCGTACATGGCTTGAT	60.524	57.895	4.92	0.00	0.00	2.57
412	3551	1.095228	CCCGCGTACATGGCTTGATT	61.095	55.000	4.92	0.00	0.00	2.57
413	3552	0.732571	CCGCGTACATGGCTTGATTT	59.267	50.000	4.92	0.00	0.00	2.17
414	3553	1.531677	CCGCGTACATGGCTTGATTTG	60.532	52.381	4.92	0.00	0.00	2.32
415	3554	1.396648	CGCGTACATGGCTTGATTTGA	59.603	47.619	7.45	0.00	0.00	2.69
416	3555	2.032054	CGCGTACATGGCTTGATTTGAT	59.968	45.455	7.45	0.00	0.00	2.57
417	3556	3.487376	CGCGTACATGGCTTGATTTGATT	60.487	43.478	7.45	0.00	0.00	2.57
418	3557	3.792956	GCGTACATGGCTTGATTTGATTG	59.207	43.478	7.45	0.00	0.00	2.67
419	3558	4.353737	CGTACATGGCTTGATTTGATTGG	58.646	43.478	7.45	0.00	0.00	3.16
420	3559	4.096231	CGTACATGGCTTGATTTGATTGGA	59.904	41.667	7.45	0.00	0.00	3.53
421	3560	5.392919	CGTACATGGCTTGATTTGATTGGAA	60.393	40.000	7.45	0.00	0.00	3.53
422	3561	5.080969	ACATGGCTTGATTTGATTGGAAG	57.919	39.130	7.45	0.00	0.00	3.46
423	3562	4.773674	ACATGGCTTGATTTGATTGGAAGA	59.226	37.500	7.45	0.00	0.00	2.87
424	3563	5.246656	ACATGGCTTGATTTGATTGGAAGAA	59.753	36.000	7.45	0.00	0.00	2.52
425	3564	5.804944	TGGCTTGATTTGATTGGAAGAAA	57.195	34.783	0.00	0.00	0.00	2.52
426	3565	6.172136	TGGCTTGATTTGATTGGAAGAAAA	57.828	33.333	0.00	0.00	0.00	2.29
427	3566	6.771573	TGGCTTGATTTGATTGGAAGAAAAT	58.228	32.000	0.00	0.00	0.00	1.82
428	3567	7.905265	TGGCTTGATTTGATTGGAAGAAAATA	58.095	30.769	0.00	0.00	0.00	1.40
429	3568	8.373981	TGGCTTGATTTGATTGGAAGAAAATAA	58.626	29.630	0.00	0.00	0.00	1.40
430	3569	9.218440	GGCTTGATTTGATTGGAAGAAAATAAA	57.782	29.630	0.00	0.00	0.00	1.40
434	3573	9.500785	TGATTTGATTGGAAGAAAATAAAACCC	57.499	29.630	0.00	0.00	0.00	4.11
435	3574	7.954788	TTTGATTGGAAGAAAATAAAACCCG	57.045	32.000	0.00	0.00	0.00	5.28
436	3575	6.031751	TGATTGGAAGAAAATAAAACCCGG	57.968	37.500	0.00	0.00	0.00	5.73
437	3576	3.945981	TGGAAGAAAATAAAACCCGGC	57.054	42.857	0.00	0.00	0.00	6.13
438	3577	2.563620	TGGAAGAAAATAAAACCCGGCC	59.436	45.455	0.00	0.00	0.00	6.13
439	3578	2.093869	GGAAGAAAATAAAACCCGGCCC	60.094	50.000	0.00	0.00	0.00	5.80
440	3579	1.563924	AGAAAATAAAACCCGGCCCC	58.436	50.000	0.00	0.00	0.00	5.80
441	3580	1.203199	AGAAAATAAAACCCGGCCCCA	60.203	47.619	0.00	0.00	0.00	4.96
442	3581	0.978151	AAAATAAAACCCGGCCCCAC	59.022	50.000	0.00	0.00	0.00	4.61
443	3582	0.115547	AAATAAAACCCGGCCCCACT	59.884	50.000	0.00	0.00	0.00	4.00
444	3583	0.115547	AATAAAACCCGGCCCCACTT	59.884	50.000	0.00	0.00	0.00	3.16
445	3584	0.323999	ATAAAACCCGGCCCCACTTC	60.324	55.000	0.00	0.00	0.00	3.01
446	3585	2.429235	TAAAACCCGGCCCCACTTCC	62.429	60.000	0.00	0.00	0.00	3.46
448	3587	3.876255	AACCCGGCCCCACTTCCTA	62.876	63.158	0.00	0.00	0.00	2.94
449	3588	3.012722	CCCGGCCCCACTTCCTAA	61.013	66.667	0.00	0.00	0.00	2.69
450	3589	2.608550	CCCGGCCCCACTTCCTAAA	61.609	63.158	0.00	0.00	0.00	1.85
451	3590	1.381076	CCGGCCCCACTTCCTAAAA	59.619	57.895	0.00	0.00	0.00	1.52
452	3591	0.251430	CCGGCCCCACTTCCTAAAAA	60.251	55.000	0.00	0.00	0.00	1.94
453	3592	1.618616	CCGGCCCCACTTCCTAAAAAT	60.619	52.381	0.00	0.00	0.00	1.82
454	3593	1.749063	CGGCCCCACTTCCTAAAAATC	59.251	52.381	0.00	0.00	0.00	2.17
455	3594	2.815158	GGCCCCACTTCCTAAAAATCA	58.185	47.619	0.00	0.00	0.00	2.57
456	3595	2.760650	GGCCCCACTTCCTAAAAATCAG	59.239	50.000	0.00	0.00	0.00	2.90
457	3596	2.760650	GCCCCACTTCCTAAAAATCAGG	59.239	50.000	0.00	0.00	34.20	3.86
458	3597	3.365472	CCCCACTTCCTAAAAATCAGGG	58.635	50.000	0.00	0.00	33.66	4.45
459	3598	3.365472	CCCACTTCCTAAAAATCAGGGG	58.635	50.000	0.00	0.00	33.66	4.79
460	3599	3.365472	CCACTTCCTAAAAATCAGGGGG	58.635	50.000	0.00	0.00	33.66	5.40
461	3600	3.011257	CCACTTCCTAAAAATCAGGGGGA	59.989	47.826	0.00	0.00	33.66	4.81
462	3601	4.273318	CACTTCCTAAAAATCAGGGGGAG	58.727	47.826	0.00	0.00	33.66	4.30
463	3602	4.018415	CACTTCCTAAAAATCAGGGGGAGA	60.018	45.833	0.00	0.00	33.66	3.71
464	3603	4.796265	ACTTCCTAAAAATCAGGGGGAGAT	59.204	41.667	0.00	0.00	33.66	2.75
465	3604	4.796110	TCCTAAAAATCAGGGGGAGATG	57.204	45.455	0.00	0.00	33.66	2.90
466	3605	4.379875	TCCTAAAAATCAGGGGGAGATGA	58.620	43.478	0.00	0.00	33.66	2.92
467	3606	4.984268	TCCTAAAAATCAGGGGGAGATGAT	59.016	41.667	0.00	0.00	37.77	2.45
468	3607	5.436374	TCCTAAAAATCAGGGGGAGATGATT	59.564	40.000	0.00	0.00	45.67	2.57
469	3608	6.623602	TCCTAAAAATCAGGGGGAGATGATTA	59.376	38.462	1.20	0.00	43.56	1.75
470	3609	6.944862	CCTAAAAATCAGGGGGAGATGATTAG	59.055	42.308	1.20	0.00	43.56	1.73
471	3610	6.596869	AAAAATCAGGGGGAGATGATTAGA	57.403	37.500	1.20	0.00	43.56	2.10
472	3611	6.793518	AAAATCAGGGGGAGATGATTAGAT	57.206	37.500	1.20	0.00	43.56	1.98
473	3612	6.793518	AAATCAGGGGGAGATGATTAGATT	57.206	37.500	1.20	0.00	43.56	2.40
474	3613	7.895144	AAATCAGGGGGAGATGATTAGATTA	57.105	36.000	1.20	0.00	43.56	1.75
475	3614	7.507797	AATCAGGGGGAGATGATTAGATTAG	57.492	40.000	0.00	0.00	42.77	1.73
476	3615	6.233045	TCAGGGGGAGATGATTAGATTAGA	57.767	41.667	0.00	0.00	0.00	2.10
477	3616	6.634041	TCAGGGGGAGATGATTAGATTAGAA	58.366	40.000	0.00	0.00	0.00	2.10
478	3617	7.082316	TCAGGGGGAGATGATTAGATTAGAAA	58.918	38.462	0.00	0.00	0.00	2.52
479	3618	7.572485	TCAGGGGGAGATGATTAGATTAGAAAA	59.428	37.037	0.00	0.00	0.00	2.29
480	3619	8.220559	CAGGGGGAGATGATTAGATTAGAAAAA	58.779	37.037	0.00	0.00	0.00	1.94
503	3642	7.423844	AAAAAGGAAAAAGGATAGCCATAGG	57.576	36.000	0.00	0.00	36.29	2.57
504	3643	5.994416	AAGGAAAAAGGATAGCCATAGGA	57.006	39.130	0.00	0.00	36.29	2.94
505	3644	6.536684	AAGGAAAAAGGATAGCCATAGGAT	57.463	37.500	0.00	0.00	36.29	3.24
506	3645	5.885465	AGGAAAAAGGATAGCCATAGGATG	58.115	41.667	0.00	0.00	36.29	3.51
507	3646	5.612688	AGGAAAAAGGATAGCCATAGGATGA	59.387	40.000	0.00	0.00	36.29	2.92
508	3647	6.103205	AGGAAAAAGGATAGCCATAGGATGAA	59.897	38.462	0.00	0.00	36.29	2.57
509	3648	6.432472	GGAAAAAGGATAGCCATAGGATGAAG	59.568	42.308	0.00	0.00	36.29	3.02
510	3649	6.521527	AAAAGGATAGCCATAGGATGAAGT	57.478	37.500	0.00	0.00	36.29	3.01
511	3650	5.495926	AAGGATAGCCATAGGATGAAGTG	57.504	43.478	0.00	0.00	36.29	3.16
512	3651	3.843027	AGGATAGCCATAGGATGAAGTGG	59.157	47.826	0.00	0.00	36.29	4.00
513	3652	3.054802	GGATAGCCATAGGATGAAGTGGG	60.055	52.174	0.00	0.00	32.35	4.61
514	3653	2.196742	AGCCATAGGATGAAGTGGGA	57.803	50.000	0.00	0.00	32.35	4.37
515	3654	2.053244	AGCCATAGGATGAAGTGGGAG	58.947	52.381	0.00	0.00	32.35	4.30
516	3655	1.544314	GCCATAGGATGAAGTGGGAGC	60.544	57.143	0.00	0.00	32.35	4.70
517	3656	1.770658	CCATAGGATGAAGTGGGAGCA	59.229	52.381	0.00	0.00	0.00	4.26
518	3657	2.374504	CCATAGGATGAAGTGGGAGCAT	59.625	50.000	0.00	0.00	0.00	3.79
519	3658	3.409570	CATAGGATGAAGTGGGAGCATG	58.590	50.000	0.00	0.00	0.00	4.06
520	3659	0.549950	AGGATGAAGTGGGAGCATGG	59.450	55.000	0.00	0.00	0.00	3.66
521	3660	0.466922	GGATGAAGTGGGAGCATGGG	60.467	60.000	0.00	0.00	0.00	4.00
522	3661	0.548031	GATGAAGTGGGAGCATGGGA	59.452	55.000	0.00	0.00	0.00	4.37
523	3662	1.002069	ATGAAGTGGGAGCATGGGAA	58.998	50.000	0.00	0.00	0.00	3.97
524	3663	0.329261	TGAAGTGGGAGCATGGGAAG	59.671	55.000	0.00	0.00	0.00	3.46
525	3664	0.394899	GAAGTGGGAGCATGGGAAGG	60.395	60.000	0.00	0.00	0.00	3.46
526	3665	1.867595	AAGTGGGAGCATGGGAAGGG	61.868	60.000	0.00	0.00	0.00	3.95
527	3666	2.127065	TGGGAGCATGGGAAGGGA	59.873	61.111	0.00	0.00	0.00	4.20
528	3667	2.002977	TGGGAGCATGGGAAGGGAG	61.003	63.158	0.00	0.00	0.00	4.30
529	3668	2.003548	GGGAGCATGGGAAGGGAGT	61.004	63.158	0.00	0.00	0.00	3.85
530	3669	0.694444	GGGAGCATGGGAAGGGAGTA	60.694	60.000	0.00	0.00	0.00	2.59
531	3670	1.213296	GGAGCATGGGAAGGGAGTAA	58.787	55.000	0.00	0.00	0.00	2.24
532	3671	1.141858	GGAGCATGGGAAGGGAGTAAG	59.858	57.143	0.00	0.00	0.00	2.34
533	3672	1.840635	GAGCATGGGAAGGGAGTAAGT	59.159	52.381	0.00	0.00	0.00	2.24
534	3673	3.039011	GAGCATGGGAAGGGAGTAAGTA	58.961	50.000	0.00	0.00	0.00	2.24
535	3674	3.454812	GAGCATGGGAAGGGAGTAAGTAA	59.545	47.826	0.00	0.00	0.00	2.24
536	3675	3.456277	AGCATGGGAAGGGAGTAAGTAAG	59.544	47.826	0.00	0.00	0.00	2.34
537	3676	3.809905	CATGGGAAGGGAGTAAGTAAGC	58.190	50.000	0.00	0.00	0.00	3.09
538	3677	2.193993	TGGGAAGGGAGTAAGTAAGCC	58.806	52.381	0.00	0.00	0.00	4.35
539	3678	1.138464	GGGAAGGGAGTAAGTAAGCCG	59.862	57.143	0.00	0.00	0.00	5.52
540	3679	1.138464	GGAAGGGAGTAAGTAAGCCGG	59.862	57.143	0.00	0.00	0.00	6.13
541	3680	2.105766	GAAGGGAGTAAGTAAGCCGGA	58.894	52.381	5.05	0.00	0.00	5.14
542	3681	2.473576	AGGGAGTAAGTAAGCCGGAT	57.526	50.000	5.05	0.00	0.00	4.18
543	3682	2.317973	AGGGAGTAAGTAAGCCGGATC	58.682	52.381	5.05	0.00	0.00	3.36
544	3683	1.343789	GGGAGTAAGTAAGCCGGATCC	59.656	57.143	5.05	0.00	0.00	3.36
545	3684	1.000496	GGAGTAAGTAAGCCGGATCCG	60.000	57.143	27.65	27.65	39.44	4.18
557	3696	4.176752	GATCCGGCGCCTCCCTTT	62.177	66.667	26.68	2.59	0.00	3.11
558	3697	4.176752	ATCCGGCGCCTCCCTTTC	62.177	66.667	26.68	0.00	0.00	2.62
561	3700	4.489771	CGGCGCCTCCCTTTCCAT	62.490	66.667	26.68	0.00	0.00	3.41
562	3701	2.830370	GGCGCCTCCCTTTCCATG	60.830	66.667	22.15	0.00	0.00	3.66
563	3702	3.521796	GCGCCTCCCTTTCCATGC	61.522	66.667	0.00	0.00	0.00	4.06
564	3703	2.273449	CGCCTCCCTTTCCATGCT	59.727	61.111	0.00	0.00	0.00	3.79
565	3704	1.821332	CGCCTCCCTTTCCATGCTC	60.821	63.158	0.00	0.00	0.00	4.26
566	3705	1.454663	GCCTCCCTTTCCATGCTCC	60.455	63.158	0.00	0.00	0.00	4.70
567	3706	1.228510	CCTCCCTTTCCATGCTCCC	59.771	63.158	0.00	0.00	0.00	4.30
568	3707	1.574526	CCTCCCTTTCCATGCTCCCA	61.575	60.000	0.00	0.00	0.00	4.37
569	3708	0.554792	CTCCCTTTCCATGCTCCCAT	59.445	55.000	0.00	0.00	0.00	4.00
570	3709	0.552848	TCCCTTTCCATGCTCCCATC	59.447	55.000	0.00	0.00	0.00	3.51
571	3710	0.468771	CCCTTTCCATGCTCCCATCC	60.469	60.000	0.00	0.00	0.00	3.51
572	3711	0.820891	CCTTTCCATGCTCCCATCCG	60.821	60.000	0.00	0.00	0.00	4.18
573	3712	0.107017	CTTTCCATGCTCCCATCCGT	60.107	55.000	0.00	0.00	0.00	4.69
574	3713	0.394216	TTTCCATGCTCCCATCCGTG	60.394	55.000	0.00	0.00	0.00	4.94
575	3714	2.891941	TTCCATGCTCCCATCCGTGC	62.892	60.000	0.00	0.00	0.00	5.34
576	3715	2.191375	CATGCTCCCATCCGTGCT	59.809	61.111	0.00	0.00	0.00	4.40
577	3716	1.890979	CATGCTCCCATCCGTGCTC	60.891	63.158	0.00	0.00	0.00	4.26
578	3717	3.112205	ATGCTCCCATCCGTGCTCC	62.112	63.158	0.00	0.00	0.00	4.70
579	3718	4.554036	GCTCCCATCCGTGCTCCC	62.554	72.222	0.00	0.00	0.00	4.30
580	3719	4.227134	CTCCCATCCGTGCTCCCG	62.227	72.222	0.00	0.00	0.00	5.14
584	3723	4.201679	CATCCGTGCTCCCGCGTA	62.202	66.667	4.92	0.00	43.11	4.42
585	3724	4.203076	ATCCGTGCTCCCGCGTAC	62.203	66.667	4.92	0.00	43.11	3.67
587	3726	4.508128	CCGTGCTCCCGCGTACAT	62.508	66.667	4.92	0.00	43.11	2.29
588	3727	3.254654	CGTGCTCCCGCGTACATG	61.255	66.667	4.92	0.00	39.95	3.21
589	3728	2.890474	GTGCTCCCGCGTACATGG	60.890	66.667	4.92	0.00	39.65	3.66
590	3729	4.830765	TGCTCCCGCGTACATGGC	62.831	66.667	4.92	1.00	39.65	4.40
591	3730	4.530857	GCTCCCGCGTACATGGCT	62.531	66.667	4.92	0.00	0.00	4.75
592	3731	2.186903	CTCCCGCGTACATGGCTT	59.813	61.111	4.92	0.00	0.00	4.35
593	3732	2.125310	TCCCGCGTACATGGCTTG	60.125	61.111	4.92	0.00	0.00	4.01
594	3733	2.125310	CCCGCGTACATGGCTTGA	60.125	61.111	4.92	0.00	0.00	3.02
595	3734	1.523711	CCCGCGTACATGGCTTGAT	60.524	57.895	4.92	0.00	0.00	2.57
596	3735	1.095228	CCCGCGTACATGGCTTGATT	61.095	55.000	4.92	0.00	0.00	2.57
597	3736	0.732571	CCGCGTACATGGCTTGATTT	59.267	50.000	4.92	0.00	0.00	2.17
598	3737	1.531677	CCGCGTACATGGCTTGATTTG	60.532	52.381	4.92	0.00	0.00	2.32
599	3738	1.396648	CGCGTACATGGCTTGATTTGA	59.603	47.619	7.45	0.00	0.00	2.69
600	3739	2.032054	CGCGTACATGGCTTGATTTGAT	59.968	45.455	7.45	0.00	0.00	2.57
601	3740	3.487376	CGCGTACATGGCTTGATTTGATT	60.487	43.478	7.45	0.00	0.00	2.57
602	3741	3.792956	GCGTACATGGCTTGATTTGATTG	59.207	43.478	7.45	0.00	0.00	2.67
603	3742	4.353737	CGTACATGGCTTGATTTGATTGG	58.646	43.478	7.45	0.00	0.00	3.16
604	3743	4.096231	CGTACATGGCTTGATTTGATTGGA	59.904	41.667	7.45	0.00	0.00	3.53
605	3744	5.392919	CGTACATGGCTTGATTTGATTGGAA	60.393	40.000	7.45	0.00	0.00	3.53
606	3745	5.080969	ACATGGCTTGATTTGATTGGAAG	57.919	39.130	7.45	0.00	0.00	3.46
607	3746	4.773674	ACATGGCTTGATTTGATTGGAAGA	59.226	37.500	7.45	0.00	0.00	2.87
608	3747	5.246656	ACATGGCTTGATTTGATTGGAAGAA	59.753	36.000	7.45	0.00	0.00	2.52
609	3748	5.804944	TGGCTTGATTTGATTGGAAGAAA	57.195	34.783	0.00	0.00	0.00	2.52
610	3749	6.172136	TGGCTTGATTTGATTGGAAGAAAA	57.828	33.333	0.00	0.00	0.00	2.29
611	3750	6.771573	TGGCTTGATTTGATTGGAAGAAAAT	58.228	32.000	0.00	0.00	0.00	1.82
612	3751	7.905265	TGGCTTGATTTGATTGGAAGAAAATA	58.095	30.769	0.00	0.00	0.00	1.40
613	3752	8.373981	TGGCTTGATTTGATTGGAAGAAAATAA	58.626	29.630	0.00	0.00	0.00	1.40
614	3753	9.218440	GGCTTGATTTGATTGGAAGAAAATAAA	57.782	29.630	0.00	0.00	0.00	1.40
618	3757	9.500785	TGATTTGATTGGAAGAAAATAAAACCC	57.499	29.630	0.00	0.00	0.00	4.11
619	3758	7.954788	TTTGATTGGAAGAAAATAAAACCCG	57.045	32.000	0.00	0.00	0.00	5.28
620	3759	6.031751	TGATTGGAAGAAAATAAAACCCGG	57.968	37.500	0.00	0.00	0.00	5.73
621	3760	3.945981	TGGAAGAAAATAAAACCCGGC	57.054	42.857	0.00	0.00	0.00	6.13
622	3761	2.563620	TGGAAGAAAATAAAACCCGGCC	59.436	45.455	0.00	0.00	0.00	6.13
623	3762	2.093869	GGAAGAAAATAAAACCCGGCCC	60.094	50.000	0.00	0.00	0.00	5.80
624	3763	1.563924	AGAAAATAAAACCCGGCCCC	58.436	50.000	0.00	0.00	0.00	5.80
625	3764	1.203199	AGAAAATAAAACCCGGCCCCA	60.203	47.619	0.00	0.00	0.00	4.96
626	3765	0.978151	AAAATAAAACCCGGCCCCAC	59.022	50.000	0.00	0.00	0.00	4.61
627	3766	0.115547	AAATAAAACCCGGCCCCACT	59.884	50.000	0.00	0.00	0.00	4.00
628	3767	0.115547	AATAAAACCCGGCCCCACTT	59.884	50.000	0.00	0.00	0.00	3.16
629	3768	0.323999	ATAAAACCCGGCCCCACTTC	60.324	55.000	0.00	0.00	0.00	3.01
630	3769	2.429235	TAAAACCCGGCCCCACTTCC	62.429	60.000	0.00	0.00	0.00	3.46
632	3771	3.876255	AACCCGGCCCCACTTCCTA	62.876	63.158	0.00	0.00	0.00	2.94
633	3772	3.012722	CCCGGCCCCACTTCCTAA	61.013	66.667	0.00	0.00	0.00	2.69
634	3773	2.608550	CCCGGCCCCACTTCCTAAA	61.609	63.158	0.00	0.00	0.00	1.85
635	3774	1.381076	CCGGCCCCACTTCCTAAAA	59.619	57.895	0.00	0.00	0.00	1.52
636	3775	0.251430	CCGGCCCCACTTCCTAAAAA	60.251	55.000	0.00	0.00	0.00	1.94
637	3776	1.618616	CCGGCCCCACTTCCTAAAAAT	60.619	52.381	0.00	0.00	0.00	1.82
638	3777	2.176045	CGGCCCCACTTCCTAAAAATT	58.824	47.619	0.00	0.00	0.00	1.82
639	3778	3.358118	CGGCCCCACTTCCTAAAAATTA	58.642	45.455	0.00	0.00	0.00	1.40
640	3779	3.380320	CGGCCCCACTTCCTAAAAATTAG	59.620	47.826	0.00	0.00	0.00	1.73
641	3780	3.704566	GGCCCCACTTCCTAAAAATTAGG	59.295	47.826	9.44	9.44	36.06	2.69
642	3781	3.704566	GCCCCACTTCCTAAAAATTAGGG	59.295	47.826	14.50	4.21	35.45	3.53
643	3782	4.286707	CCCCACTTCCTAAAAATTAGGGG	58.713	47.826	14.50	0.00	46.62	4.79
644	3783	4.286707	CCCACTTCCTAAAAATTAGGGGG	58.713	47.826	14.50	12.84	35.45	5.40
645	3784	4.016944	CCCACTTCCTAAAAATTAGGGGGA	60.017	45.833	16.99	0.00	35.63	4.81
646	3785	5.201243	CCACTTCCTAAAAATTAGGGGGAG	58.799	45.833	14.50	12.28	35.45	4.30
647	3786	5.044402	CCACTTCCTAAAAATTAGGGGGAGA	60.044	44.000	14.50	0.00	35.45	3.71
648	3787	6.354829	CCACTTCCTAAAAATTAGGGGGAGAT	60.355	42.308	14.50	2.50	35.45	2.75
649	3788	6.547510	CACTTCCTAAAAATTAGGGGGAGATG	59.452	42.308	14.50	8.55	35.45	2.90
650	3789	6.450352	ACTTCCTAAAAATTAGGGGGAGATGA	59.550	38.462	14.50	0.00	35.45	2.92
651	3790	7.131069	ACTTCCTAAAAATTAGGGGGAGATGAT	59.869	37.037	14.50	0.00	35.45	2.45
652	3791	7.480222	TCCTAAAAATTAGGGGGAGATGATT	57.520	36.000	14.50	0.00	35.45	2.57
653	3792	8.590083	TCCTAAAAATTAGGGGGAGATGATTA	57.410	34.615	14.50	0.00	35.45	1.75
654	3793	8.669571	TCCTAAAAATTAGGGGGAGATGATTAG	58.330	37.037	14.50	0.00	35.45	1.73
655	3794	8.669571	CCTAAAAATTAGGGGGAGATGATTAGA	58.330	37.037	8.07	0.00	0.00	2.10
660	3799	9.635284	AAATTAGGGGGAGATGATTAGATTAGA	57.365	33.333	0.00	0.00	0.00	2.10
661	3800	9.635284	AATTAGGGGGAGATGATTAGATTAGAA	57.365	33.333	0.00	0.00	0.00	2.10
662	3801	9.635284	ATTAGGGGGAGATGATTAGATTAGAAA	57.365	33.333	0.00	0.00	0.00	2.52
663	3802	7.954539	AGGGGGAGATGATTAGATTAGAAAA	57.045	36.000	0.00	0.00	0.00	2.29
664	3803	8.350180	AGGGGGAGATGATTAGATTAGAAAAA	57.650	34.615	0.00	0.00	0.00	1.94
695	3834	6.521527	AAAAGGATAGCCATAGGATGAAGT	57.478	37.500	0.00	0.00	36.29	3.01
696	3835	5.495926	AAGGATAGCCATAGGATGAAGTG	57.504	43.478	0.00	0.00	36.29	3.16
697	3836	3.843027	AGGATAGCCATAGGATGAAGTGG	59.157	47.826	0.00	0.00	36.29	4.00
698	3837	3.054802	GGATAGCCATAGGATGAAGTGGG	60.055	52.174	0.00	0.00	32.35	4.61
699	3838	2.196742	AGCCATAGGATGAAGTGGGA	57.803	50.000	0.00	0.00	32.35	4.37
700	3839	2.053244	AGCCATAGGATGAAGTGGGAG	58.947	52.381	0.00	0.00	32.35	4.30
701	3840	1.544314	GCCATAGGATGAAGTGGGAGC	60.544	57.143	0.00	0.00	32.35	4.70
702	3841	1.770658	CCATAGGATGAAGTGGGAGCA	59.229	52.381	0.00	0.00	0.00	4.26
703	3842	2.374504	CCATAGGATGAAGTGGGAGCAT	59.625	50.000	0.00	0.00	0.00	3.79
704	3843	3.409570	CATAGGATGAAGTGGGAGCATG	58.590	50.000	0.00	0.00	0.00	4.06
705	3844	0.549950	AGGATGAAGTGGGAGCATGG	59.450	55.000	0.00	0.00	0.00	3.66
706	3845	0.466922	GGATGAAGTGGGAGCATGGG	60.467	60.000	0.00	0.00	0.00	4.00
707	3846	0.548031	GATGAAGTGGGAGCATGGGA	59.452	55.000	0.00	0.00	0.00	4.37
708	3847	1.002069	ATGAAGTGGGAGCATGGGAA	58.998	50.000	0.00	0.00	0.00	3.97
709	3848	0.329261	TGAAGTGGGAGCATGGGAAG	59.671	55.000	0.00	0.00	0.00	3.46
710	3849	0.394899	GAAGTGGGAGCATGGGAAGG	60.395	60.000	0.00	0.00	0.00	3.46
711	3850	1.867595	AAGTGGGAGCATGGGAAGGG	61.868	60.000	0.00	0.00	0.00	3.95
712	3851	2.127065	TGGGAGCATGGGAAGGGA	59.873	61.111	0.00	0.00	0.00	4.20
713	3852	2.002977	TGGGAGCATGGGAAGGGAG	61.003	63.158	0.00	0.00	0.00	4.30
714	3853	2.194326	GGAGCATGGGAAGGGAGC	59.806	66.667	0.00	0.00	0.00	4.70
715	3854	2.683465	GGAGCATGGGAAGGGAGCA	61.683	63.158	0.00	0.00	0.00	4.26
716	3855	1.304282	GAGCATGGGAAGGGAGCAA	59.696	57.895	0.00	0.00	0.00	3.91
717	3856	0.750911	GAGCATGGGAAGGGAGCAAG	60.751	60.000	0.00	0.00	0.00	4.01
718	3857	1.000396	GCATGGGAAGGGAGCAAGT	60.000	57.895	0.00	0.00	0.00	3.16
719	3858	0.255890	GCATGGGAAGGGAGCAAGTA	59.744	55.000	0.00	0.00	0.00	2.24
720	3859	1.340991	GCATGGGAAGGGAGCAAGTAA	60.341	52.381	0.00	0.00	0.00	2.24
721	3860	2.648059	CATGGGAAGGGAGCAAGTAAG	58.352	52.381	0.00	0.00	0.00	2.34
722	3861	0.328258	TGGGAAGGGAGCAAGTAAGC	59.672	55.000	0.00	0.00	0.00	3.09
723	3862	0.394488	GGGAAGGGAGCAAGTAAGCC	60.394	60.000	0.00	0.00	34.23	4.35
724	3863	0.744771	GGAAGGGAGCAAGTAAGCCG	60.745	60.000	0.00	0.00	34.23	5.52
725	3864	0.744771	GAAGGGAGCAAGTAAGCCGG	60.745	60.000	0.00	0.00	34.23	6.13
726	3865	1.198759	AAGGGAGCAAGTAAGCCGGA	61.199	55.000	5.05	0.00	34.23	5.14
727	3866	0.983378	AGGGAGCAAGTAAGCCGGAT	60.983	55.000	5.05	0.00	34.23	4.18
728	3867	0.533085	GGGAGCAAGTAAGCCGGATC	60.533	60.000	5.05	0.00	34.23	3.36
729	3868	0.533085	GGAGCAAGTAAGCCGGATCC	60.533	60.000	5.05	0.00	34.23	3.36
730	3869	0.876342	GAGCAAGTAAGCCGGATCCG	60.876	60.000	27.65	27.65	39.44	4.18
741	3880	4.971125	GGATCCGGCGCCAGCTAC	62.971	72.222	28.98	2.79	44.37	3.58
742	3881	3.917760	GATCCGGCGCCAGCTACT	61.918	66.667	28.98	3.69	44.37	2.57
743	3882	3.447025	GATCCGGCGCCAGCTACTT	62.447	63.158	28.98	2.66	44.37	2.24
744	3883	3.740128	ATCCGGCGCCAGCTACTTG	62.740	63.158	28.98	7.02	44.37	3.16
745	3884	4.760047	CCGGCGCCAGCTACTTGT	62.760	66.667	28.98	0.00	44.37	3.16
746	3885	2.742372	CGGCGCCAGCTACTTGTT	60.742	61.111	28.98	0.00	44.37	2.83
747	3886	2.740714	CGGCGCCAGCTACTTGTTC	61.741	63.158	28.98	0.00	44.37	3.18
748	3887	2.740714	GGCGCCAGCTACTTGTTCG	61.741	63.158	24.80	0.00	44.37	3.95
749	3888	2.740714	GCGCCAGCTACTTGTTCGG	61.741	63.158	0.00	0.00	41.01	4.30
750	3889	2.100631	CGCCAGCTACTTGTTCGGG	61.101	63.158	0.00	0.00	0.00	5.14
751	3890	2.399356	GCCAGCTACTTGTTCGGGC	61.399	63.158	0.00	0.00	0.00	6.13
752	3891	2.100631	CCAGCTACTTGTTCGGGCG	61.101	63.158	0.00	0.00	0.00	6.13
753	3892	2.434359	AGCTACTTGTTCGGGCGC	60.434	61.111	0.00	0.00	0.00	6.53
754	3893	2.434359	GCTACTTGTTCGGGCGCT	60.434	61.111	7.64	0.00	0.00	5.92
755	3894	2.033194	GCTACTTGTTCGGGCGCTT	61.033	57.895	7.64	0.00	0.00	4.68
756	3895	0.738412	GCTACTTGTTCGGGCGCTTA	60.738	55.000	7.64	0.00	0.00	3.09
757	3896	1.717194	CTACTTGTTCGGGCGCTTAA	58.283	50.000	7.64	0.00	0.00	1.85
758	3897	1.659098	CTACTTGTTCGGGCGCTTAAG	59.341	52.381	7.64	0.00	0.00	1.85
759	3898	0.953960	ACTTGTTCGGGCGCTTAAGG	60.954	55.000	7.64	0.00	0.00	2.69
760	3899	2.253414	CTTGTTCGGGCGCTTAAGGC	62.253	60.000	7.64	6.03	37.64	4.35
769	3908	2.785258	GCTTAAGGCGCCGAACAG	59.215	61.111	23.20	16.60	0.00	3.16
770	3909	2.750888	GCTTAAGGCGCCGAACAGG	61.751	63.158	23.20	11.55	44.97	4.00
771	3910	1.079405	CTTAAGGCGCCGAACAGGA	60.079	57.895	23.20	3.11	45.00	3.86
772	3911	0.672401	CTTAAGGCGCCGAACAGGAA	60.672	55.000	23.20	7.57	45.00	3.36
773	3912	0.672401	TTAAGGCGCCGAACAGGAAG	60.672	55.000	23.20	0.00	45.00	3.46
774	3913	2.515996	TAAGGCGCCGAACAGGAAGG	62.516	60.000	23.20	0.00	45.00	3.46
775	3914	4.388499	GGCGCCGAACAGGAAGGA	62.388	66.667	12.58	0.00	45.00	3.36
776	3915	2.815647	GCGCCGAACAGGAAGGAG	60.816	66.667	0.00	0.00	45.00	3.69
777	3916	2.815647	CGCCGAACAGGAAGGAGC	60.816	66.667	0.00	0.00	45.00	4.70
778	3917	2.665603	GCCGAACAGGAAGGAGCT	59.334	61.111	0.00	0.00	45.00	4.09
779	3918	1.448717	GCCGAACAGGAAGGAGCTC	60.449	63.158	4.71	4.71	45.00	4.09
780	3919	1.893919	GCCGAACAGGAAGGAGCTCT	61.894	60.000	14.64	0.00	45.00	4.09
781	3920	0.174617	CCGAACAGGAAGGAGCTCTC	59.825	60.000	14.64	3.85	45.00	3.20
782	3921	1.181786	CGAACAGGAAGGAGCTCTCT	58.818	55.000	14.64	6.28	0.00	3.10
783	3922	2.370349	CGAACAGGAAGGAGCTCTCTA	58.630	52.381	14.64	0.00	0.00	2.43
784	3923	2.357637	CGAACAGGAAGGAGCTCTCTAG	59.642	54.545	14.64	4.01	0.00	2.43
785	3924	3.361786	GAACAGGAAGGAGCTCTCTAGT	58.638	50.000	14.64	4.60	0.00	2.57
786	3925	3.466395	ACAGGAAGGAGCTCTCTAGTT	57.534	47.619	14.64	0.00	0.00	2.24
787	3926	4.594675	ACAGGAAGGAGCTCTCTAGTTA	57.405	45.455	14.64	0.00	0.00	2.24
793	3932	4.594675	AGGAGCTCTCTAGTTAACCTCA	57.405	45.455	14.64	0.00	0.00	3.86
794	3933	4.274978	AGGAGCTCTCTAGTTAACCTCAC	58.725	47.826	14.64	0.00	0.00	3.51
832	3971	2.851798	GGCTGAGCCTCTTGTCTTG	58.148	57.895	17.96	0.00	46.69	3.02
833	3972	0.322975	GGCTGAGCCTCTTGTCTTGA	59.677	55.000	17.96	0.00	46.69	3.02
834	3973	1.675415	GGCTGAGCCTCTTGTCTTGAG	60.675	57.143	17.96	0.00	46.69	3.02
835	3974	1.724429	CTGAGCCTCTTGTCTTGAGC	58.276	55.000	0.00	0.00	0.00	4.26
836	3975	1.275856	CTGAGCCTCTTGTCTTGAGCT	59.724	52.381	0.00	0.00	0.00	4.09
837	3976	1.274728	TGAGCCTCTTGTCTTGAGCTC	59.725	52.381	6.82	6.82	36.36	4.09
838	3977	1.274728	GAGCCTCTTGTCTTGAGCTCA	59.725	52.381	13.74	13.74	36.12	4.26
839	3978	1.275856	AGCCTCTTGTCTTGAGCTCAG	59.724	52.381	17.43	11.30	0.00	3.35
866	4005	5.416013	GCAGACTTGAAAGGCCTAAAGTAAT	59.584	40.000	21.96	14.12	33.27	1.89
868	4007	7.530863	CAGACTTGAAAGGCCTAAAGTAATTC	58.469	38.462	21.96	14.17	33.27	2.17
869	4008	6.659668	AGACTTGAAAGGCCTAAAGTAATTCC	59.340	38.462	21.96	12.86	33.27	3.01
870	4009	5.715279	ACTTGAAAGGCCTAAAGTAATTCCC	59.285	40.000	21.05	0.00	31.26	3.97
871	4010	5.530176	TGAAAGGCCTAAAGTAATTCCCT	57.470	39.130	5.16	0.00	0.00	4.20
872	4011	6.645884	TGAAAGGCCTAAAGTAATTCCCTA	57.354	37.500	5.16	0.00	0.00	3.53
873	4012	7.034967	TGAAAGGCCTAAAGTAATTCCCTAA	57.965	36.000	5.16	0.00	0.00	2.69
874	4013	7.648770	TGAAAGGCCTAAAGTAATTCCCTAAT	58.351	34.615	5.16	0.00	0.00	1.73
875	4014	8.119891	TGAAAGGCCTAAAGTAATTCCCTAATT	58.880	33.333	5.16	0.00	38.80	1.40
876	4015	9.636789	GAAAGGCCTAAAGTAATTCCCTAATTA	57.363	33.333	5.16	0.00	36.67	1.40
918	4057	6.909550	TTCTCTAATTTAGCCCAGCAAAAA	57.090	33.333	0.00	0.00	0.00	1.94
931	4070	1.156095	CAAAAAGGCTCCCCCACCT	59.844	57.895	0.00	0.00	38.14	4.00
934	4073	3.701991	AAGGCTCCCCCACCTTTT	58.298	55.556	0.00	0.00	43.91	2.27
935	4074	1.946243	AAGGCTCCCCCACCTTTTT	59.054	52.632	0.00	0.00	43.91	1.94
936	4075	0.178932	AAGGCTCCCCCACCTTTTTC	60.179	55.000	0.00	0.00	43.91	2.29
937	4076	1.155155	GGCTCCCCCACCTTTTTCA	59.845	57.895	0.00	0.00	0.00	2.69
938	4077	0.471022	GGCTCCCCCACCTTTTTCAA	60.471	55.000	0.00	0.00	0.00	2.69
939	4078	1.419381	GCTCCCCCACCTTTTTCAAA	58.581	50.000	0.00	0.00	0.00	2.69
940	4079	1.765904	GCTCCCCCACCTTTTTCAAAA	59.234	47.619	0.00	0.00	0.00	2.44
941	4080	2.171659	GCTCCCCCACCTTTTTCAAAAA	59.828	45.455	0.00	0.00	0.00	1.94
998	4144	4.664677	GTCGTGTGGCAGGCGTCT	62.665	66.667	9.84	0.00	0.00	4.18
1054	4200	2.745884	TCAAATCCGCCGCCACTG	60.746	61.111	0.00	0.00	0.00	3.66
1236	4382	0.041238	TCTCCTGGACGTCCCTCATT	59.959	55.000	31.19	0.00	35.38	2.57
1258	4404	4.643387	GCCACGCTCACCAGGGTT	62.643	66.667	0.00	0.00	43.11	4.11
1265	4411	2.904866	TCACCAGGGTTTGCACGC	60.905	61.111	0.00	0.00	36.07	5.34
1269	4415	1.973281	CCAGGGTTTGCACGCAGAT	60.973	57.895	0.00	0.00	38.34	2.90
1285	4431	2.416566	GCAGATTCTCTCGCACTTCTGA	60.417	50.000	0.00	0.00	34.00	3.27
1326	4472	2.046604	GCTCCCAACGGGTACACC	60.047	66.667	0.00	0.00	44.74	4.16
1437	4583	1.331399	TGTATGGCCCGGTCGATTCA	61.331	55.000	0.00	0.00	0.00	2.57
1446	4592	1.405526	CCGGTCGATTCAGTTGTGGAT	60.406	52.381	0.00	0.00	0.00	3.41
1467	4613	3.713826	AACGGGGTTCTTGACATGTAT	57.286	42.857	0.00	0.00	0.00	2.29
1488	4634	0.953471	CGAGGTGCCGGAATGTTGAA	60.953	55.000	5.05	0.00	0.00	2.69
1502	4648	2.826428	TGTTGAATATGCGAGGAGAGC	58.174	47.619	0.00	0.00	0.00	4.09
1626	4772	2.818751	TGGTTTCTTGTGAGGTTGGT	57.181	45.000	0.00	0.00	0.00	3.67
1698	4844	3.243569	CGTTGTTAAAACAGGGGATGCAA	60.244	43.478	0.00	0.00	40.50	4.08
1740	4886	4.159135	GGTGCAGGATTTGATTCTGATGTT	59.841	41.667	0.39	0.00	0.00	2.71
1860	5006	1.957177	TGGACTACGATGATCTCAGCC	59.043	52.381	0.00	0.00	0.00	4.85
1977	5123	0.692476	TGTCAGCTTGTAGCCATGGT	59.308	50.000	14.67	2.69	43.77	3.55
2123	5269	7.610692	AGAAGATGCTCTTGAATTCATTGAGAA	59.389	33.333	28.36	23.05	36.73	2.87
2130	5276	7.469594	GCTCTTGAATTCATTGAGAATATGCCA	60.470	37.037	28.36	5.25	46.09	4.92
2383	5529	1.678728	GGGTCGAGTTGCATGATGGAA	60.679	52.381	0.00	0.00	0.00	3.53
2568	5715	5.758924	GACATTGTCCTAGTTGGTTGTTTC	58.241	41.667	5.44	0.00	37.07	2.78
2604	5751	4.043073	GCTACTAGTGACGTCAAATAGGC	58.957	47.826	28.86	22.80	0.00	3.93
2625	5772	5.104193	AGGCTGTGAGATGAAAATATGTCCT	60.104	40.000	0.00	0.00	0.00	3.85
2672	5819	5.386924	AGGATAAGTAAGGTGATACGCTCT	58.613	41.667	0.00	0.00	0.00	4.09
2675	5822	1.409427	AGTAAGGTGATACGCTCTGGC	59.591	52.381	0.00	0.00	0.00	4.85
2689	5836	1.662629	CTCTGGCGACTTGCTTATGTG	59.337	52.381	0.00	0.00	45.43	3.21
2725	5872	8.821147	ATTATACTATATGCGACGGTTTTCAA	57.179	30.769	0.00	0.00	0.00	2.69
2730	5877	0.871722	TGCGACGGTTTTCAAGATGG	59.128	50.000	0.00	0.00	0.00	3.51
2739	5886	4.559300	CGGTTTTCAAGATGGTGCTTTCAT	60.559	41.667	0.00	0.00	0.00	2.57
2741	5888	5.406477	GGTTTTCAAGATGGTGCTTTCATTC	59.594	40.000	0.00	0.00	0.00	2.67
2759	5906	6.241207	TCATTCGACCATGAAGAAGTTTTC	57.759	37.500	0.00	0.00	29.81	2.29
2799	5948	6.088217	GTCGACACAGATGGATATATTGTTCG	59.912	42.308	11.55	9.96	0.00	3.95
2838	5991	9.807649	GGATTTCATCAATGCAAATAAGTAAGT	57.192	29.630	0.00	0.00	33.41	2.24
2840	5993	8.464770	TTTCATCAATGCAAATAAGTAAGTGC	57.535	30.769	0.00	0.00	37.51	4.40
2843	5996	7.970061	TCATCAATGCAAATAAGTAAGTGCTTC	59.030	33.333	0.00	0.00	37.87	3.86
2847	6000	8.430063	CAATGCAAATAAGTAAGTGCTTCTTTG	58.570	33.333	12.53	12.53	41.44	2.77
2852	6005	9.897744	CAAATAAGTAAGTGCTTCTTTGATTCA	57.102	29.630	11.85	0.00	41.22	2.57
2878	6031	7.939784	AAGGTATTTTGGTGGATTCTACTTC	57.060	36.000	0.00	0.00	0.00	3.01
2885	6038	6.494666	TTGGTGGATTCTACTTCGGATTAT	57.505	37.500	0.00	0.00	0.00	1.28
2908	6061	4.348168	TCCCCCTATAGCTCTTGTTTCATC	59.652	45.833	0.00	0.00	0.00	2.92
2969	6122	4.751098	GGAGCACTTTTCATGCAATTTCAA	59.249	37.500	0.00	0.00	45.92	2.69
2972	6125	6.050432	AGCACTTTTCATGCAATTTCAAAGA	58.950	32.000	11.82	0.00	45.92	2.52
2975	6128	7.697291	GCACTTTTCATGCAATTTCAAAGAAAA	59.303	29.630	15.47	15.47	42.88	2.29
3007	6160	2.158325	AGCCCAACCTCATGGAAAAAGA	60.158	45.455	0.00	0.00	43.54	2.52
3010	6163	4.824289	CCCAACCTCATGGAAAAAGATTG	58.176	43.478	0.00	0.00	43.54	2.67
3060	6213	9.958180	TGACCTAATCATTCAAGAAAGTTCATA	57.042	29.630	0.00	0.00	29.99	2.15
3177	6333	9.665719	ATGTTTTTCCTATTCTTGTGTGTTTTT	57.334	25.926	0.00	0.00	0.00	1.94
3216	6372	9.489084	ACAAAGAAGCCCTAAATTTGATTAAAC	57.511	29.630	0.00	0.00	35.40	2.01
3241	6397	6.293735	CCGAAAGTTAATCCTTTGTTACTGCA	60.294	38.462	0.00	0.00	34.87	4.41
3378	6848	1.202687	TGGCTATGGCTGTATGACTGC	60.203	52.381	0.00	0.27	41.55	4.40
3402	6872	3.652869	AGGGACTGATCTCTGTTTTTCCA	59.347	43.478	0.00	0.00	32.84	3.53
3403	6873	4.006319	GGGACTGATCTCTGTTTTTCCAG	58.994	47.826	0.00	0.00	0.00	3.86

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
55	56	8.757164	AACAAAAAGAGTTCTTCAAATTTCGT	57.243	26.923	0.00	0.00	34.61	3.85
87	89	9.838975	ATTTGAAAACAATTTGGAAAAGTTGAC	57.161	25.926	0.78	0.00	0.00	3.18
125	127	5.344128	CCAACGTACGCGCTCTATTTATTAT	59.656	40.000	16.72	0.00	42.83	1.28
141	143	6.236357	GCGAAACTATTAAGAACCAACGTAC	58.764	40.000	0.00	0.00	0.00	3.67
145	147	4.644954	CCGCGAAACTATTAAGAACCAAC	58.355	43.478	8.23	0.00	0.00	3.77
157	159	2.676632	TTAGAATGGCCGCGAAACTA	57.323	45.000	8.23	0.00	0.00	2.24
159	161	1.332904	CGATTAGAATGGCCGCGAAAC	60.333	52.381	8.23	0.00	0.00	2.78
173	175	1.924524	CGGTAAGTGCCACACGATTAG	59.075	52.381	0.00	0.00	39.64	1.73
176	178	0.389426	GACGGTAAGTGCCACACGAT	60.389	55.000	0.00	0.00	39.64	3.73
182	184	1.005037	CAGCAGACGGTAAGTGCCA	60.005	57.895	6.11	0.00	37.98	4.92
183	185	1.004918	ACAGCAGACGGTAAGTGCC	60.005	57.895	6.11	0.00	37.98	5.01
185	187	0.033504	ACCACAGCAGACGGTAAGTG	59.966	55.000	0.00	0.00	0.00	3.16
186	188	0.756903	AACCACAGCAGACGGTAAGT	59.243	50.000	0.00	0.00	31.12	2.24
187	189	2.736144	TAACCACAGCAGACGGTAAG	57.264	50.000	0.00	0.00	31.12	2.34
194	196	4.523083	ACAGTTTTCTTAACCACAGCAGA	58.477	39.130	0.00	0.00	0.00	4.26
198	200	6.310224	CACCAAAACAGTTTTCTTAACCACAG	59.690	38.462	8.40	0.00	0.00	3.66
199	201	6.159988	CACCAAAACAGTTTTCTTAACCACA	58.840	36.000	8.40	0.00	0.00	4.17
215	217	2.292103	TGCAAGCAGAACACCAAAAC	57.708	45.000	0.00	0.00	0.00	2.43
218	220	0.746063	CCTTGCAAGCAGAACACCAA	59.254	50.000	21.43	0.00	0.00	3.67
220	222	1.006922	GCCTTGCAAGCAGAACACC	60.007	57.895	21.43	0.00	0.00	4.16
226	228	4.456253	CTCGCGCCTTGCAAGCAG	62.456	66.667	21.43	16.63	46.97	4.24
230	232	3.711842	CGAACTCGCGCCTTGCAA	61.712	61.111	0.00	0.00	46.97	4.08
247	3385	1.809684	AAGTGCGGCTAAAAGGACTC	58.190	50.000	0.00	0.00	38.08	3.36
290	3429	3.502211	CCACACGCAGTAGAAGGAAAAAT	59.498	43.478	0.00	0.00	41.61	1.82
350	3489	0.463474	GGAGCAGGCAAGTCTCATCC	60.463	60.000	0.00	0.00	0.00	3.51
351	3490	0.463474	GGGAGCAGGCAAGTCTCATC	60.463	60.000	0.00	0.00	0.00	2.92
352	3491	0.913451	AGGGAGCAGGCAAGTCTCAT	60.913	55.000	0.00	0.00	0.00	2.90
353	3492	1.130054	AAGGGAGCAGGCAAGTCTCA	61.130	55.000	0.00	0.00	0.00	3.27
354	3493	0.037447	AAAGGGAGCAGGCAAGTCTC	59.963	55.000	0.00	0.00	0.00	3.36
355	3494	0.037447	GAAAGGGAGCAGGCAAGTCT	59.963	55.000	0.00	0.00	0.00	3.24
356	3495	0.962855	GGAAAGGGAGCAGGCAAGTC	60.963	60.000	0.00	0.00	0.00	3.01
357	3496	1.075659	GGAAAGGGAGCAGGCAAGT	59.924	57.895	0.00	0.00	0.00	3.16
358	3497	0.324091	ATGGAAAGGGAGCAGGCAAG	60.324	55.000	0.00	0.00	0.00	4.01
359	3498	0.612732	CATGGAAAGGGAGCAGGCAA	60.613	55.000	0.00	0.00	0.00	4.52
360	3499	1.000521	CATGGAAAGGGAGCAGGCA	60.001	57.895	0.00	0.00	0.00	4.75
361	3500	2.421399	GCATGGAAAGGGAGCAGGC	61.421	63.158	0.00	0.00	0.00	4.85
362	3501	0.750911	GAGCATGGAAAGGGAGCAGG	60.751	60.000	0.00	0.00	0.00	4.85
363	3502	0.750911	GGAGCATGGAAAGGGAGCAG	60.751	60.000	0.00	0.00	0.00	4.24
364	3503	1.304282	GGAGCATGGAAAGGGAGCA	59.696	57.895	0.00	0.00	0.00	4.26
365	3504	1.454663	GGGAGCATGGAAAGGGAGC	60.455	63.158	0.00	0.00	0.00	4.70
366	3505	0.554792	ATGGGAGCATGGAAAGGGAG	59.445	55.000	0.00	0.00	0.00	4.30
367	3506	0.552848	GATGGGAGCATGGAAAGGGA	59.447	55.000	0.00	0.00	0.00	4.20
368	3507	0.468771	GGATGGGAGCATGGAAAGGG	60.469	60.000	0.00	0.00	0.00	3.95
369	3508	0.820891	CGGATGGGAGCATGGAAAGG	60.821	60.000	0.00	0.00	0.00	3.11
370	3509	0.107017	ACGGATGGGAGCATGGAAAG	60.107	55.000	0.00	0.00	0.00	2.62
371	3510	0.394216	CACGGATGGGAGCATGGAAA	60.394	55.000	0.00	0.00	0.00	3.13
372	3511	1.224315	CACGGATGGGAGCATGGAA	59.776	57.895	0.00	0.00	0.00	3.53
373	3512	2.910360	CACGGATGGGAGCATGGA	59.090	61.111	0.00	0.00	0.00	3.41
374	3513	2.903855	GCACGGATGGGAGCATGG	60.904	66.667	0.00	0.00	0.00	3.66
375	3514	1.890979	GAGCACGGATGGGAGCATG	60.891	63.158	0.00	0.00	0.00	4.06
376	3515	2.507944	GAGCACGGATGGGAGCAT	59.492	61.111	0.00	0.00	0.00	3.79
377	3516	3.785859	GGAGCACGGATGGGAGCA	61.786	66.667	0.00	0.00	0.00	4.26
378	3517	4.554036	GGGAGCACGGATGGGAGC	62.554	72.222	0.00	0.00	0.00	4.70
379	3518	4.227134	CGGGAGCACGGATGGGAG	62.227	72.222	0.00	0.00	0.00	4.30
391	3530	2.173669	CAAGCCATGTACGCGGGAG	61.174	63.158	12.47	0.00	0.00	4.30
392	3531	1.966901	ATCAAGCCATGTACGCGGGA	61.967	55.000	12.47	0.00	0.00	5.14
393	3532	1.095228	AATCAAGCCATGTACGCGGG	61.095	55.000	12.47	1.71	0.00	6.13
394	3533	0.732571	AAATCAAGCCATGTACGCGG	59.267	50.000	12.47	0.00	0.00	6.46
395	3534	1.396648	TCAAATCAAGCCATGTACGCG	59.603	47.619	3.53	3.53	0.00	6.01
396	3535	3.698029	ATCAAATCAAGCCATGTACGC	57.302	42.857	0.00	0.00	0.00	4.42
397	3536	4.096231	TCCAATCAAATCAAGCCATGTACG	59.904	41.667	0.00	0.00	0.00	3.67
398	3537	5.581126	TCCAATCAAATCAAGCCATGTAC	57.419	39.130	0.00	0.00	0.00	2.90
399	3538	5.951148	TCTTCCAATCAAATCAAGCCATGTA	59.049	36.000	0.00	0.00	0.00	2.29
400	3539	4.773674	TCTTCCAATCAAATCAAGCCATGT	59.226	37.500	0.00	0.00	0.00	3.21
401	3540	5.333299	TCTTCCAATCAAATCAAGCCATG	57.667	39.130	0.00	0.00	0.00	3.66
402	3541	6.363167	TTTCTTCCAATCAAATCAAGCCAT	57.637	33.333	0.00	0.00	0.00	4.40
403	3542	5.804944	TTTCTTCCAATCAAATCAAGCCA	57.195	34.783	0.00	0.00	0.00	4.75
404	3543	8.776376	TTATTTTCTTCCAATCAAATCAAGCC	57.224	30.769	0.00	0.00	0.00	4.35
408	3547	9.500785	GGGTTTTATTTTCTTCCAATCAAATCA	57.499	29.630	0.00	0.00	0.00	2.57
409	3548	8.655970	CGGGTTTTATTTTCTTCCAATCAAATC	58.344	33.333	0.00	0.00	0.00	2.17
410	3549	7.606073	CCGGGTTTTATTTTCTTCCAATCAAAT	59.394	33.333	0.00	0.00	0.00	2.32
411	3550	6.931840	CCGGGTTTTATTTTCTTCCAATCAAA	59.068	34.615	0.00	0.00	0.00	2.69
412	3551	6.459923	CCGGGTTTTATTTTCTTCCAATCAA	58.540	36.000	0.00	0.00	0.00	2.57
413	3552	5.567823	GCCGGGTTTTATTTTCTTCCAATCA	60.568	40.000	2.18	0.00	0.00	2.57
414	3553	4.868171	GCCGGGTTTTATTTTCTTCCAATC	59.132	41.667	2.18	0.00	0.00	2.67
415	3554	4.323180	GGCCGGGTTTTATTTTCTTCCAAT	60.323	41.667	2.18	0.00	0.00	3.16
416	3555	3.007074	GGCCGGGTTTTATTTTCTTCCAA	59.993	43.478	2.18	0.00	0.00	3.53
417	3556	2.563620	GGCCGGGTTTTATTTTCTTCCA	59.436	45.455	2.18	0.00	0.00	3.53
418	3557	2.093869	GGGCCGGGTTTTATTTTCTTCC	60.094	50.000	2.18	0.00	0.00	3.46
419	3558	2.093869	GGGGCCGGGTTTTATTTTCTTC	60.094	50.000	2.18	0.00	0.00	2.87
420	3559	1.903860	GGGGCCGGGTTTTATTTTCTT	59.096	47.619	2.18	0.00	0.00	2.52
421	3560	1.203199	TGGGGCCGGGTTTTATTTTCT	60.203	47.619	2.18	0.00	0.00	2.52
422	3561	1.066716	GTGGGGCCGGGTTTTATTTTC	60.067	52.381	2.18	0.00	0.00	2.29
423	3562	0.978151	GTGGGGCCGGGTTTTATTTT	59.022	50.000	2.18	0.00	0.00	1.82
424	3563	0.115547	AGTGGGGCCGGGTTTTATTT	59.884	50.000	2.18	0.00	0.00	1.40
425	3564	0.115547	AAGTGGGGCCGGGTTTTATT	59.884	50.000	2.18	0.00	0.00	1.40
426	3565	0.323999	GAAGTGGGGCCGGGTTTTAT	60.324	55.000	2.18	0.00	0.00	1.40
427	3566	1.075305	GAAGTGGGGCCGGGTTTTA	59.925	57.895	2.18	0.00	0.00	1.52
428	3567	2.203582	GAAGTGGGGCCGGGTTTT	60.204	61.111	2.18	0.00	0.00	2.43
429	3568	4.295199	GGAAGTGGGGCCGGGTTT	62.295	66.667	2.18	0.00	0.00	3.27
430	3569	3.876255	TAGGAAGTGGGGCCGGGTT	62.876	63.158	2.18	0.00	0.00	4.11
431	3570	3.876255	TTAGGAAGTGGGGCCGGGT	62.876	63.158	2.18	0.00	0.00	5.28
432	3571	2.144859	TTTTAGGAAGTGGGGCCGGG	62.145	60.000	2.18	0.00	0.00	5.73
433	3572	0.251430	TTTTTAGGAAGTGGGGCCGG	60.251	55.000	0.00	0.00	0.00	6.13
434	3573	1.749063	GATTTTTAGGAAGTGGGGCCG	59.251	52.381	0.00	0.00	0.00	6.13
435	3574	2.760650	CTGATTTTTAGGAAGTGGGGCC	59.239	50.000	0.00	0.00	0.00	5.80
436	3575	2.760650	CCTGATTTTTAGGAAGTGGGGC	59.239	50.000	0.00	0.00	37.52	5.80
437	3576	3.365472	CCCTGATTTTTAGGAAGTGGGG	58.635	50.000	0.00	0.00	37.52	4.96
438	3577	3.365472	CCCCTGATTTTTAGGAAGTGGG	58.635	50.000	0.00	0.00	37.52	4.61
439	3578	3.011257	TCCCCCTGATTTTTAGGAAGTGG	59.989	47.826	0.00	0.00	37.52	4.00
440	3579	4.018415	TCTCCCCCTGATTTTTAGGAAGTG	60.018	45.833	0.00	0.00	37.52	3.16
441	3580	4.183916	TCTCCCCCTGATTTTTAGGAAGT	58.816	43.478	0.00	0.00	37.52	3.01
442	3581	4.862641	TCTCCCCCTGATTTTTAGGAAG	57.137	45.455	0.00	0.00	37.52	3.46
443	3582	4.793520	TCATCTCCCCCTGATTTTTAGGAA	59.206	41.667	0.00	0.00	37.52	3.36
444	3583	4.379875	TCATCTCCCCCTGATTTTTAGGA	58.620	43.478	0.00	0.00	37.52	2.94
445	3584	4.796110	TCATCTCCCCCTGATTTTTAGG	57.204	45.455	0.00	0.00	35.01	2.69
446	3585	7.749666	TCTAATCATCTCCCCCTGATTTTTAG	58.250	38.462	3.40	0.00	41.22	1.85
447	3586	7.705912	TCTAATCATCTCCCCCTGATTTTTA	57.294	36.000	3.40	0.00	41.22	1.52
448	3587	6.596869	TCTAATCATCTCCCCCTGATTTTT	57.403	37.500	3.40	0.00	41.22	1.94
449	3588	6.793518	ATCTAATCATCTCCCCCTGATTTT	57.206	37.500	3.40	0.00	41.22	1.82
450	3589	6.793518	AATCTAATCATCTCCCCCTGATTT	57.206	37.500	3.40	0.00	41.22	2.17
451	3590	7.259391	TCTAATCTAATCATCTCCCCCTGATT	58.741	38.462	3.57	3.57	42.92	2.57
452	3591	6.820205	TCTAATCTAATCATCTCCCCCTGAT	58.180	40.000	0.00	0.00	33.59	2.90
453	3592	6.233045	TCTAATCTAATCATCTCCCCCTGA	57.767	41.667	0.00	0.00	0.00	3.86
454	3593	6.942163	TTCTAATCTAATCATCTCCCCCTG	57.058	41.667	0.00	0.00	0.00	4.45
455	3594	7.954539	TTTTCTAATCTAATCATCTCCCCCT	57.045	36.000	0.00	0.00	0.00	4.79
479	3618	7.189087	TCCTATGGCTATCCTTTTTCCTTTTT	58.811	34.615	0.00	0.00	0.00	1.94
480	3619	6.741724	TCCTATGGCTATCCTTTTTCCTTTT	58.258	36.000	0.00	0.00	0.00	2.27
481	3620	6.341408	TCCTATGGCTATCCTTTTTCCTTT	57.659	37.500	0.00	0.00	0.00	3.11
482	3621	5.994416	TCCTATGGCTATCCTTTTTCCTT	57.006	39.130	0.00	0.00	0.00	3.36
483	3622	5.612688	TCATCCTATGGCTATCCTTTTTCCT	59.387	40.000	0.00	0.00	0.00	3.36
484	3623	5.880901	TCATCCTATGGCTATCCTTTTTCC	58.119	41.667	0.00	0.00	0.00	3.13
485	3624	7.001073	ACTTCATCCTATGGCTATCCTTTTTC	58.999	38.462	0.00	0.00	0.00	2.29
486	3625	6.774656	CACTTCATCCTATGGCTATCCTTTTT	59.225	38.462	0.00	0.00	0.00	1.94
487	3626	6.302269	CACTTCATCCTATGGCTATCCTTTT	58.698	40.000	0.00	0.00	0.00	2.27
488	3627	5.222007	CCACTTCATCCTATGGCTATCCTTT	60.222	44.000	0.00	0.00	0.00	3.11
489	3628	4.288105	CCACTTCATCCTATGGCTATCCTT	59.712	45.833	0.00	0.00	0.00	3.36
490	3629	3.843027	CCACTTCATCCTATGGCTATCCT	59.157	47.826	0.00	0.00	0.00	3.24
491	3630	3.054802	CCCACTTCATCCTATGGCTATCC	60.055	52.174	0.00	0.00	0.00	2.59
492	3631	3.840666	TCCCACTTCATCCTATGGCTATC	59.159	47.826	0.00	0.00	0.00	2.08
493	3632	3.843027	CTCCCACTTCATCCTATGGCTAT	59.157	47.826	0.00	0.00	0.00	2.97
494	3633	3.242867	CTCCCACTTCATCCTATGGCTA	58.757	50.000	0.00	0.00	0.00	3.93
495	3634	2.053244	CTCCCACTTCATCCTATGGCT	58.947	52.381	0.00	0.00	0.00	4.75
496	3635	1.544314	GCTCCCACTTCATCCTATGGC	60.544	57.143	0.00	0.00	0.00	4.40
497	3636	1.770658	TGCTCCCACTTCATCCTATGG	59.229	52.381	0.00	0.00	0.00	2.74
498	3637	3.409570	CATGCTCCCACTTCATCCTATG	58.590	50.000	0.00	0.00	0.00	2.23
499	3638	2.374504	CCATGCTCCCACTTCATCCTAT	59.625	50.000	0.00	0.00	0.00	2.57
500	3639	1.770658	CCATGCTCCCACTTCATCCTA	59.229	52.381	0.00	0.00	0.00	2.94
501	3640	0.549950	CCATGCTCCCACTTCATCCT	59.450	55.000	0.00	0.00	0.00	3.24
502	3641	0.466922	CCCATGCTCCCACTTCATCC	60.467	60.000	0.00	0.00	0.00	3.51
503	3642	0.548031	TCCCATGCTCCCACTTCATC	59.452	55.000	0.00	0.00	0.00	2.92
504	3643	1.002069	TTCCCATGCTCCCACTTCAT	58.998	50.000	0.00	0.00	0.00	2.57
505	3644	0.329261	CTTCCCATGCTCCCACTTCA	59.671	55.000	0.00	0.00	0.00	3.02
506	3645	0.394899	CCTTCCCATGCTCCCACTTC	60.395	60.000	0.00	0.00	0.00	3.01
507	3646	1.693640	CCTTCCCATGCTCCCACTT	59.306	57.895	0.00	0.00	0.00	3.16
508	3647	2.311854	CCCTTCCCATGCTCCCACT	61.312	63.158	0.00	0.00	0.00	4.00
509	3648	2.276309	CTCCCTTCCCATGCTCCCAC	62.276	65.000	0.00	0.00	0.00	4.61
510	3649	2.002977	CTCCCTTCCCATGCTCCCA	61.003	63.158	0.00	0.00	0.00	4.37
511	3650	0.694444	TACTCCCTTCCCATGCTCCC	60.694	60.000	0.00	0.00	0.00	4.30
512	3651	1.141858	CTTACTCCCTTCCCATGCTCC	59.858	57.143	0.00	0.00	0.00	4.70
513	3652	1.840635	ACTTACTCCCTTCCCATGCTC	59.159	52.381	0.00	0.00	0.00	4.26
514	3653	1.972588	ACTTACTCCCTTCCCATGCT	58.027	50.000	0.00	0.00	0.00	3.79
515	3654	3.809905	CTTACTTACTCCCTTCCCATGC	58.190	50.000	0.00	0.00	0.00	4.06
516	3655	3.433740	GGCTTACTTACTCCCTTCCCATG	60.434	52.174	0.00	0.00	0.00	3.66
517	3656	2.778270	GGCTTACTTACTCCCTTCCCAT	59.222	50.000	0.00	0.00	0.00	4.00
518	3657	2.193993	GGCTTACTTACTCCCTTCCCA	58.806	52.381	0.00	0.00	0.00	4.37
519	3658	1.138464	CGGCTTACTTACTCCCTTCCC	59.862	57.143	0.00	0.00	0.00	3.97
520	3659	1.138464	CCGGCTTACTTACTCCCTTCC	59.862	57.143	0.00	0.00	0.00	3.46
521	3660	2.105766	TCCGGCTTACTTACTCCCTTC	58.894	52.381	0.00	0.00	0.00	3.46
522	3661	2.242882	TCCGGCTTACTTACTCCCTT	57.757	50.000	0.00	0.00	0.00	3.95
523	3662	2.317973	GATCCGGCTTACTTACTCCCT	58.682	52.381	0.00	0.00	0.00	4.20
524	3663	1.343789	GGATCCGGCTTACTTACTCCC	59.656	57.143	0.00	0.00	0.00	4.30
525	3664	1.000496	CGGATCCGGCTTACTTACTCC	60.000	57.143	26.95	0.00	35.56	3.85
526	3665	2.418983	CGGATCCGGCTTACTTACTC	57.581	55.000	26.95	0.00	35.56	2.59
540	3679	4.176752	AAAGGGAGGCGCCGGATC	62.177	66.667	23.20	13.72	37.63	3.36
541	3680	4.176752	GAAAGGGAGGCGCCGGAT	62.177	66.667	23.20	2.64	37.63	4.18
544	3683	4.489771	ATGGAAAGGGAGGCGCCG	62.490	66.667	23.20	0.00	37.63	6.46
545	3684	2.830370	CATGGAAAGGGAGGCGCC	60.830	66.667	21.89	21.89	0.00	6.53
546	3685	3.521796	GCATGGAAAGGGAGGCGC	61.522	66.667	0.00	0.00	0.00	6.53
547	3686	1.821332	GAGCATGGAAAGGGAGGCG	60.821	63.158	0.00	0.00	0.00	5.52
548	3687	1.454663	GGAGCATGGAAAGGGAGGC	60.455	63.158	0.00	0.00	0.00	4.70
549	3688	1.228510	GGGAGCATGGAAAGGGAGG	59.771	63.158	0.00	0.00	0.00	4.30
550	3689	0.554792	ATGGGAGCATGGAAAGGGAG	59.445	55.000	0.00	0.00	0.00	4.30
551	3690	0.552848	GATGGGAGCATGGAAAGGGA	59.447	55.000	0.00	0.00	0.00	4.20
552	3691	0.468771	GGATGGGAGCATGGAAAGGG	60.469	60.000	0.00	0.00	0.00	3.95
553	3692	0.820891	CGGATGGGAGCATGGAAAGG	60.821	60.000	0.00	0.00	0.00	3.11
554	3693	0.107017	ACGGATGGGAGCATGGAAAG	60.107	55.000	0.00	0.00	0.00	2.62
555	3694	0.394216	CACGGATGGGAGCATGGAAA	60.394	55.000	0.00	0.00	0.00	3.13
556	3695	1.224315	CACGGATGGGAGCATGGAA	59.776	57.895	0.00	0.00	0.00	3.53
557	3696	2.910360	CACGGATGGGAGCATGGA	59.090	61.111	0.00	0.00	0.00	3.41
558	3697	2.903855	GCACGGATGGGAGCATGG	60.904	66.667	0.00	0.00	0.00	3.66
559	3698	1.890979	GAGCACGGATGGGAGCATG	60.891	63.158	0.00	0.00	0.00	4.06
560	3699	2.507944	GAGCACGGATGGGAGCAT	59.492	61.111	0.00	0.00	0.00	3.79
561	3700	3.785859	GGAGCACGGATGGGAGCA	61.786	66.667	0.00	0.00	0.00	4.26
562	3701	4.554036	GGGAGCACGGATGGGAGC	62.554	72.222	0.00	0.00	0.00	4.70
563	3702	4.227134	CGGGAGCACGGATGGGAG	62.227	72.222	0.00	0.00	0.00	4.30
575	3714	2.173669	CAAGCCATGTACGCGGGAG	61.174	63.158	12.47	0.00	0.00	4.30
576	3715	1.966901	ATCAAGCCATGTACGCGGGA	61.967	55.000	12.47	0.00	0.00	5.14
577	3716	1.095228	AATCAAGCCATGTACGCGGG	61.095	55.000	12.47	1.71	0.00	6.13
578	3717	0.732571	AAATCAAGCCATGTACGCGG	59.267	50.000	12.47	0.00	0.00	6.46
579	3718	1.396648	TCAAATCAAGCCATGTACGCG	59.603	47.619	3.53	3.53	0.00	6.01
580	3719	3.698029	ATCAAATCAAGCCATGTACGC	57.302	42.857	0.00	0.00	0.00	4.42
581	3720	4.096231	TCCAATCAAATCAAGCCATGTACG	59.904	41.667	0.00	0.00	0.00	3.67
582	3721	5.581126	TCCAATCAAATCAAGCCATGTAC	57.419	39.130	0.00	0.00	0.00	2.90
583	3722	5.951148	TCTTCCAATCAAATCAAGCCATGTA	59.049	36.000	0.00	0.00	0.00	2.29
584	3723	4.773674	TCTTCCAATCAAATCAAGCCATGT	59.226	37.500	0.00	0.00	0.00	3.21
585	3724	5.333299	TCTTCCAATCAAATCAAGCCATG	57.667	39.130	0.00	0.00	0.00	3.66
586	3725	6.363167	TTTCTTCCAATCAAATCAAGCCAT	57.637	33.333	0.00	0.00	0.00	4.40
587	3726	5.804944	TTTCTTCCAATCAAATCAAGCCA	57.195	34.783	0.00	0.00	0.00	4.75
588	3727	8.776376	TTATTTTCTTCCAATCAAATCAAGCC	57.224	30.769	0.00	0.00	0.00	4.35
592	3731	9.500785	GGGTTTTATTTTCTTCCAATCAAATCA	57.499	29.630	0.00	0.00	0.00	2.57
593	3732	8.655970	CGGGTTTTATTTTCTTCCAATCAAATC	58.344	33.333	0.00	0.00	0.00	2.17
594	3733	7.606073	CCGGGTTTTATTTTCTTCCAATCAAAT	59.394	33.333	0.00	0.00	0.00	2.32
595	3734	6.931840	CCGGGTTTTATTTTCTTCCAATCAAA	59.068	34.615	0.00	0.00	0.00	2.69
596	3735	6.459923	CCGGGTTTTATTTTCTTCCAATCAA	58.540	36.000	0.00	0.00	0.00	2.57
597	3736	5.567823	GCCGGGTTTTATTTTCTTCCAATCA	60.568	40.000	2.18	0.00	0.00	2.57
598	3737	4.868171	GCCGGGTTTTATTTTCTTCCAATC	59.132	41.667	2.18	0.00	0.00	2.67
599	3738	4.323180	GGCCGGGTTTTATTTTCTTCCAAT	60.323	41.667	2.18	0.00	0.00	3.16
600	3739	3.007074	GGCCGGGTTTTATTTTCTTCCAA	59.993	43.478	2.18	0.00	0.00	3.53
601	3740	2.563620	GGCCGGGTTTTATTTTCTTCCA	59.436	45.455	2.18	0.00	0.00	3.53
602	3741	2.093869	GGGCCGGGTTTTATTTTCTTCC	60.094	50.000	2.18	0.00	0.00	3.46
603	3742	2.093869	GGGGCCGGGTTTTATTTTCTTC	60.094	50.000	2.18	0.00	0.00	2.87
604	3743	1.903860	GGGGCCGGGTTTTATTTTCTT	59.096	47.619	2.18	0.00	0.00	2.52
605	3744	1.203199	TGGGGCCGGGTTTTATTTTCT	60.203	47.619	2.18	0.00	0.00	2.52
606	3745	1.066716	GTGGGGCCGGGTTTTATTTTC	60.067	52.381	2.18	0.00	0.00	2.29
607	3746	0.978151	GTGGGGCCGGGTTTTATTTT	59.022	50.000	2.18	0.00	0.00	1.82
608	3747	0.115547	AGTGGGGCCGGGTTTTATTT	59.884	50.000	2.18	0.00	0.00	1.40
609	3748	0.115547	AAGTGGGGCCGGGTTTTATT	59.884	50.000	2.18	0.00	0.00	1.40
610	3749	0.323999	GAAGTGGGGCCGGGTTTTAT	60.324	55.000	2.18	0.00	0.00	1.40
611	3750	1.075305	GAAGTGGGGCCGGGTTTTA	59.925	57.895	2.18	0.00	0.00	1.52
612	3751	2.203582	GAAGTGGGGCCGGGTTTT	60.204	61.111	2.18	0.00	0.00	2.43
613	3752	4.295199	GGAAGTGGGGCCGGGTTT	62.295	66.667	2.18	0.00	0.00	3.27
614	3753	3.876255	TAGGAAGTGGGGCCGGGTT	62.876	63.158	2.18	0.00	0.00	4.11
615	3754	3.876255	TTAGGAAGTGGGGCCGGGT	62.876	63.158	2.18	0.00	0.00	5.28
616	3755	2.144859	TTTTAGGAAGTGGGGCCGGG	62.145	60.000	2.18	0.00	0.00	5.73
617	3756	0.251430	TTTTTAGGAAGTGGGGCCGG	60.251	55.000	0.00	0.00	0.00	6.13
618	3757	1.847328	ATTTTTAGGAAGTGGGGCCG	58.153	50.000	0.00	0.00	0.00	6.13
619	3758	3.704566	CCTAATTTTTAGGAAGTGGGGCC	59.295	47.826	7.42	0.00	36.85	5.80
620	3759	3.704566	CCCTAATTTTTAGGAAGTGGGGC	59.295	47.826	13.67	0.00	38.32	5.80
621	3760	4.286707	CCCCTAATTTTTAGGAAGTGGGG	58.713	47.826	13.67	0.00	42.82	4.96
622	3761	4.016944	TCCCCCTAATTTTTAGGAAGTGGG	60.017	45.833	13.67	14.16	36.85	4.61
623	3762	5.044402	TCTCCCCCTAATTTTTAGGAAGTGG	60.044	44.000	13.67	7.00	36.85	4.00
624	3763	6.074698	TCTCCCCCTAATTTTTAGGAAGTG	57.925	41.667	13.67	6.59	36.85	3.16
625	3764	6.450352	TCATCTCCCCCTAATTTTTAGGAAGT	59.550	38.462	13.67	0.22	36.85	3.01
626	3765	6.911308	TCATCTCCCCCTAATTTTTAGGAAG	58.089	40.000	13.67	8.64	36.85	3.46
627	3766	6.918951	TCATCTCCCCCTAATTTTTAGGAA	57.081	37.500	13.67	0.54	36.85	3.36
628	3767	7.480222	AATCATCTCCCCCTAATTTTTAGGA	57.520	36.000	13.67	0.00	36.85	2.94
629	3768	8.669571	TCTAATCATCTCCCCCTAATTTTTAGG	58.330	37.037	6.37	6.37	34.52	2.69
634	3773	9.635284	TCTAATCTAATCATCTCCCCCTAATTT	57.365	33.333	0.00	0.00	0.00	1.82
635	3774	9.635284	TTCTAATCTAATCATCTCCCCCTAATT	57.365	33.333	0.00	0.00	0.00	1.40
636	3775	9.635284	TTTCTAATCTAATCATCTCCCCCTAAT	57.365	33.333	0.00	0.00	0.00	1.73
637	3776	9.460413	TTTTCTAATCTAATCATCTCCCCCTAA	57.540	33.333	0.00	0.00	0.00	2.69
638	3777	9.460413	TTTTTCTAATCTAATCATCTCCCCCTA	57.540	33.333	0.00	0.00	0.00	3.53
639	3778	7.954539	TTTTCTAATCTAATCATCTCCCCCT	57.045	36.000	0.00	0.00	0.00	4.79
671	3810	6.774656	CACTTCATCCTATGGCTATCCTTTTT	59.225	38.462	0.00	0.00	0.00	1.94
672	3811	6.302269	CACTTCATCCTATGGCTATCCTTTT	58.698	40.000	0.00	0.00	0.00	2.27
673	3812	5.222007	CCACTTCATCCTATGGCTATCCTTT	60.222	44.000	0.00	0.00	0.00	3.11
674	3813	4.288105	CCACTTCATCCTATGGCTATCCTT	59.712	45.833	0.00	0.00	0.00	3.36
675	3814	3.843027	CCACTTCATCCTATGGCTATCCT	59.157	47.826	0.00	0.00	0.00	3.24
676	3815	3.054802	CCCACTTCATCCTATGGCTATCC	60.055	52.174	0.00	0.00	0.00	2.59
677	3816	3.840666	TCCCACTTCATCCTATGGCTATC	59.159	47.826	0.00	0.00	0.00	2.08
678	3817	3.843027	CTCCCACTTCATCCTATGGCTAT	59.157	47.826	0.00	0.00	0.00	2.97
679	3818	3.242867	CTCCCACTTCATCCTATGGCTA	58.757	50.000	0.00	0.00	0.00	3.93
680	3819	2.053244	CTCCCACTTCATCCTATGGCT	58.947	52.381	0.00	0.00	0.00	4.75
681	3820	1.544314	GCTCCCACTTCATCCTATGGC	60.544	57.143	0.00	0.00	0.00	4.40
682	3821	1.770658	TGCTCCCACTTCATCCTATGG	59.229	52.381	0.00	0.00	0.00	2.74
683	3822	3.409570	CATGCTCCCACTTCATCCTATG	58.590	50.000	0.00	0.00	0.00	2.23
684	3823	2.374504	CCATGCTCCCACTTCATCCTAT	59.625	50.000	0.00	0.00	0.00	2.57
685	3824	1.770658	CCATGCTCCCACTTCATCCTA	59.229	52.381	0.00	0.00	0.00	2.94
686	3825	0.549950	CCATGCTCCCACTTCATCCT	59.450	55.000	0.00	0.00	0.00	3.24
687	3826	0.466922	CCCATGCTCCCACTTCATCC	60.467	60.000	0.00	0.00	0.00	3.51
688	3827	0.548031	TCCCATGCTCCCACTTCATC	59.452	55.000	0.00	0.00	0.00	2.92
689	3828	1.002069	TTCCCATGCTCCCACTTCAT	58.998	50.000	0.00	0.00	0.00	2.57
690	3829	0.329261	CTTCCCATGCTCCCACTTCA	59.671	55.000	0.00	0.00	0.00	3.02
691	3830	0.394899	CCTTCCCATGCTCCCACTTC	60.395	60.000	0.00	0.00	0.00	3.01
692	3831	1.693640	CCTTCCCATGCTCCCACTT	59.306	57.895	0.00	0.00	0.00	3.16
693	3832	2.311854	CCCTTCCCATGCTCCCACT	61.312	63.158	0.00	0.00	0.00	4.00
694	3833	2.276309	CTCCCTTCCCATGCTCCCAC	62.276	65.000	0.00	0.00	0.00	4.61
695	3834	2.002977	CTCCCTTCCCATGCTCCCA	61.003	63.158	0.00	0.00	0.00	4.37
696	3835	2.922234	CTCCCTTCCCATGCTCCC	59.078	66.667	0.00	0.00	0.00	4.30
697	3836	2.194326	GCTCCCTTCCCATGCTCC	59.806	66.667	0.00	0.00	0.00	4.70
698	3837	0.750911	CTTGCTCCCTTCCCATGCTC	60.751	60.000	0.00	0.00	0.00	4.26
699	3838	1.305623	CTTGCTCCCTTCCCATGCT	59.694	57.895	0.00	0.00	0.00	3.79
700	3839	0.255890	TACTTGCTCCCTTCCCATGC	59.744	55.000	0.00	0.00	0.00	4.06
701	3840	2.648059	CTTACTTGCTCCCTTCCCATG	58.352	52.381	0.00	0.00	0.00	3.66
702	3841	1.064389	GCTTACTTGCTCCCTTCCCAT	60.064	52.381	0.00	0.00	0.00	4.00
703	3842	0.328258	GCTTACTTGCTCCCTTCCCA	59.672	55.000	0.00	0.00	0.00	4.37
704	3843	0.394488	GGCTTACTTGCTCCCTTCCC	60.394	60.000	0.00	0.00	0.00	3.97
705	3844	0.744771	CGGCTTACTTGCTCCCTTCC	60.745	60.000	0.00	0.00	0.00	3.46
706	3845	0.744771	CCGGCTTACTTGCTCCCTTC	60.745	60.000	0.00	0.00	0.00	3.46
707	3846	1.198759	TCCGGCTTACTTGCTCCCTT	61.199	55.000	0.00	0.00	0.00	3.95
708	3847	0.983378	ATCCGGCTTACTTGCTCCCT	60.983	55.000	0.00	0.00	0.00	4.20
709	3848	0.533085	GATCCGGCTTACTTGCTCCC	60.533	60.000	0.00	0.00	0.00	4.30
710	3849	0.533085	GGATCCGGCTTACTTGCTCC	60.533	60.000	0.00	0.00	0.00	4.70
711	3850	0.876342	CGGATCCGGCTTACTTGCTC	60.876	60.000	26.95	0.00	35.56	4.26
712	3851	1.144057	CGGATCCGGCTTACTTGCT	59.856	57.895	26.95	0.00	35.56	3.91
713	3852	3.719214	CGGATCCGGCTTACTTGC	58.281	61.111	26.95	0.00	35.56	4.01
724	3863	4.971125	GTAGCTGGCGCCGGATCC	62.971	72.222	39.24	21.54	36.60	3.36
725	3864	3.447025	AAGTAGCTGGCGCCGGATC	62.447	63.158	39.24	24.61	36.60	3.36
726	3865	3.470888	AAGTAGCTGGCGCCGGAT	61.471	61.111	39.24	35.27	36.60	4.18
727	3866	4.451150	CAAGTAGCTGGCGCCGGA	62.451	66.667	39.24	16.88	36.60	5.14
728	3867	4.760047	ACAAGTAGCTGGCGCCGG	62.760	66.667	31.57	31.57	36.60	6.13
729	3868	2.740714	GAACAAGTAGCTGGCGCCG	61.741	63.158	23.90	17.75	36.60	6.46
730	3869	2.740714	CGAACAAGTAGCTGGCGCC	61.741	63.158	22.73	22.73	36.60	6.53
731	3870	2.740714	CCGAACAAGTAGCTGGCGC	61.741	63.158	0.00	0.00	0.00	6.53
732	3871	2.100631	CCCGAACAAGTAGCTGGCG	61.101	63.158	0.00	0.00	0.00	5.69
733	3872	2.399356	GCCCGAACAAGTAGCTGGC	61.399	63.158	0.00	0.00	0.00	4.85
734	3873	2.100631	CGCCCGAACAAGTAGCTGG	61.101	63.158	0.00	0.00	0.00	4.85
735	3874	2.740714	GCGCCCGAACAAGTAGCTG	61.741	63.158	0.00	0.00	0.00	4.24
736	3875	2.434359	GCGCCCGAACAAGTAGCT	60.434	61.111	0.00	0.00	0.00	3.32
737	3876	0.738412	TAAGCGCCCGAACAAGTAGC	60.738	55.000	2.29	0.00	0.00	3.58
738	3877	1.659098	CTTAAGCGCCCGAACAAGTAG	59.341	52.381	2.29	0.00	0.00	2.57
739	3878	1.673626	CCTTAAGCGCCCGAACAAGTA	60.674	52.381	2.29	0.00	0.00	2.24
740	3879	0.953960	CCTTAAGCGCCCGAACAAGT	60.954	55.000	2.29	0.00	0.00	3.16
741	3880	1.794222	CCTTAAGCGCCCGAACAAG	59.206	57.895	2.29	0.00	0.00	3.16
742	3881	2.329614	GCCTTAAGCGCCCGAACAA	61.330	57.895	2.29	0.00	0.00	2.83
743	3882	2.744709	GCCTTAAGCGCCCGAACA	60.745	61.111	2.29	0.00	0.00	3.18
752	3891	2.750888	CCTGTTCGGCGCCTTAAGC	61.751	63.158	26.68	12.32	38.52	3.09
753	3892	0.672401	TTCCTGTTCGGCGCCTTAAG	60.672	55.000	26.68	15.85	0.00	1.85
754	3893	0.672401	CTTCCTGTTCGGCGCCTTAA	60.672	55.000	26.68	16.06	0.00	1.85
755	3894	1.079405	CTTCCTGTTCGGCGCCTTA	60.079	57.895	26.68	9.93	0.00	2.69
756	3895	2.358737	CTTCCTGTTCGGCGCCTT	60.359	61.111	26.68	0.00	0.00	4.35
757	3896	4.394712	CCTTCCTGTTCGGCGCCT	62.395	66.667	26.68	0.00	0.00	5.52
758	3897	4.388499	TCCTTCCTGTTCGGCGCC	62.388	66.667	19.07	19.07	0.00	6.53
759	3898	2.815647	CTCCTTCCTGTTCGGCGC	60.816	66.667	0.00	0.00	0.00	6.53
760	3899	2.815647	GCTCCTTCCTGTTCGGCG	60.816	66.667	0.00	0.00	0.00	6.46
761	3900	1.448717	GAGCTCCTTCCTGTTCGGC	60.449	63.158	0.87	0.00	0.00	5.54
762	3901	0.174617	GAGAGCTCCTTCCTGTTCGG	59.825	60.000	10.93	0.00	0.00	4.30
763	3902	1.181786	AGAGAGCTCCTTCCTGTTCG	58.818	55.000	10.93	0.00	0.00	3.95
764	3903	3.361786	ACTAGAGAGCTCCTTCCTGTTC	58.638	50.000	10.93	0.00	0.00	3.18
765	3904	3.466395	ACTAGAGAGCTCCTTCCTGTT	57.534	47.619	10.93	0.00	0.00	3.16
766	3905	3.466395	AACTAGAGAGCTCCTTCCTGT	57.534	47.619	10.93	1.68	0.00	4.00
767	3906	4.098807	GGTTAACTAGAGAGCTCCTTCCTG	59.901	50.000	10.93	1.05	0.00	3.86
768	3907	4.016944	AGGTTAACTAGAGAGCTCCTTCCT	60.017	45.833	10.93	5.48	0.00	3.36
769	3908	4.283337	AGGTTAACTAGAGAGCTCCTTCC	58.717	47.826	10.93	0.00	0.00	3.46
770	3909	4.951094	TGAGGTTAACTAGAGAGCTCCTTC	59.049	45.833	10.93	1.96	37.17	3.46
771	3910	4.707934	GTGAGGTTAACTAGAGAGCTCCTT	59.292	45.833	10.93	0.91	37.17	3.36
772	3911	4.017867	AGTGAGGTTAACTAGAGAGCTCCT	60.018	45.833	10.93	9.95	37.17	3.69
773	3912	4.274978	AGTGAGGTTAACTAGAGAGCTCC	58.725	47.826	10.93	1.70	37.17	4.70
774	3913	5.297527	GGTAGTGAGGTTAACTAGAGAGCTC	59.702	48.000	5.27	5.27	38.16	4.09
775	3914	5.044698	AGGTAGTGAGGTTAACTAGAGAGCT	60.045	44.000	5.42	0.00	30.90	4.09
776	3915	5.195185	AGGTAGTGAGGTTAACTAGAGAGC	58.805	45.833	5.42	0.00	30.90	4.09
777	3916	7.567458	ACTAGGTAGTGAGGTTAACTAGAGAG	58.433	42.308	5.42	0.00	39.66	3.20
778	3917	7.507797	ACTAGGTAGTGAGGTTAACTAGAGA	57.492	40.000	5.42	0.00	39.66	3.10
779	3918	8.578448	AAACTAGGTAGTGAGGTTAACTAGAG	57.422	38.462	5.42	0.00	39.66	2.43
780	3919	8.389366	AGAAACTAGGTAGTGAGGTTAACTAGA	58.611	37.037	5.42	0.00	39.66	2.43
781	3920	8.578448	AGAAACTAGGTAGTGAGGTTAACTAG	57.422	38.462	5.42	3.47	41.88	2.57
782	3921	7.335422	CGAGAAACTAGGTAGTGAGGTTAACTA	59.665	40.741	5.42	0.00	36.50	2.24
783	3922	6.150809	CGAGAAACTAGGTAGTGAGGTTAACT	59.849	42.308	5.42	0.00	36.50	2.24
784	3923	6.150140	TCGAGAAACTAGGTAGTGAGGTTAAC	59.850	42.308	0.00	0.00	36.50	2.01
785	3924	6.240894	TCGAGAAACTAGGTAGTGAGGTTAA	58.759	40.000	0.00	0.00	36.50	2.01
786	3925	5.809001	TCGAGAAACTAGGTAGTGAGGTTA	58.191	41.667	0.00	0.00	36.50	2.85
787	3926	4.660168	TCGAGAAACTAGGTAGTGAGGTT	58.340	43.478	0.00	0.00	36.50	3.50
793	3932	3.762823	CCCACTTCGAGAAACTAGGTAGT	59.237	47.826	0.00	0.00	38.39	2.73
794	3933	3.429135	GCCCACTTCGAGAAACTAGGTAG	60.429	52.174	0.00	0.00	0.00	3.18
835	3974	2.697654	CCTTTCAAGTCTGCTCCTGAG	58.302	52.381	0.00	0.00	0.00	3.35
836	3975	1.271054	GCCTTTCAAGTCTGCTCCTGA	60.271	52.381	0.00	0.00	0.00	3.86
837	3976	1.163554	GCCTTTCAAGTCTGCTCCTG	58.836	55.000	0.00	0.00	0.00	3.86
838	3977	0.037447	GGCCTTTCAAGTCTGCTCCT	59.963	55.000	0.00	0.00	0.00	3.69
839	3978	0.037447	AGGCCTTTCAAGTCTGCTCC	59.963	55.000	0.00	0.00	0.00	4.70
887	4026	8.687242	GCTGGGCTAAATTAGAGAATTACTTTT	58.313	33.333	3.88	0.00	34.01	2.27
888	4027	7.834181	TGCTGGGCTAAATTAGAGAATTACTTT	59.166	33.333	3.88	0.00	34.01	2.66
889	4028	7.346471	TGCTGGGCTAAATTAGAGAATTACTT	58.654	34.615	3.88	0.00	34.01	2.24
890	4029	6.900194	TGCTGGGCTAAATTAGAGAATTACT	58.100	36.000	3.88	0.00	34.01	2.24
891	4030	7.568199	TTGCTGGGCTAAATTAGAGAATTAC	57.432	36.000	3.88	0.00	34.01	1.89
892	4031	8.588290	TTTTGCTGGGCTAAATTAGAGAATTA	57.412	30.769	3.88	0.00	34.01	1.40
893	4032	7.480760	TTTTGCTGGGCTAAATTAGAGAATT	57.519	32.000	3.88	0.00	36.82	2.17
894	4033	7.364144	CCTTTTTGCTGGGCTAAATTAGAGAAT	60.364	37.037	3.88	0.00	33.95	2.40
895	4034	6.071391	CCTTTTTGCTGGGCTAAATTAGAGAA	60.071	38.462	3.88	0.00	33.95	2.87
898	4037	4.081697	GCCTTTTTGCTGGGCTAAATTAGA	60.082	41.667	3.88	0.00	42.31	2.10
918	4057	1.368268	TGAAAAAGGTGGGGGAGCCT	61.368	55.000	0.00	0.00	36.51	4.58
941	4080	2.117423	CGGTGGGGGAGCCTTTTT	59.883	61.111	0.00	0.00	0.00	1.94
942	4081	2.708593	GAACGGTGGGGGAGCCTTTT	62.709	60.000	0.00	0.00	0.00	2.27
943	4082	3.182996	AACGGTGGGGGAGCCTTT	61.183	61.111	0.00	0.00	0.00	3.11
944	4083	3.647771	GAACGGTGGGGGAGCCTT	61.648	66.667	0.00	0.00	0.00	4.35
998	4144	2.954684	GCGTCCCACTCCCACATCA	61.955	63.158	0.00	0.00	0.00	3.07
1054	4200	3.728373	ATGGGGAGTGGAACGGCC	61.728	66.667	0.00	0.00	45.86	6.13
1125	4271	1.716826	GCGCGAGTGAGGTAGCTAGT	61.717	60.000	12.10	0.00	0.00	2.57
1269	4415	0.244994	GCCTCAGAAGTGCGAGAGAA	59.755	55.000	0.00	0.00	0.00	2.87
1285	4431	1.452651	CAGATTCCACCATGCGCCT	60.453	57.895	4.18	0.00	0.00	5.52
1437	4583	1.982958	AGAACCCCGTTATCCACAACT	59.017	47.619	0.00	0.00	0.00	3.16
1446	4592	4.509616	CATACATGTCAAGAACCCCGTTA	58.490	43.478	0.00	0.00	0.00	3.18
1467	4613	3.545124	AACATTCCGGCACCTCGCA	62.545	57.895	0.00	0.00	45.17	5.10
1488	4634	1.539065	CCAAACGCTCTCCTCGCATAT	60.539	52.381	0.00	0.00	0.00	1.78
1502	4648	2.635443	GCCACCATCACCCCAAACG	61.635	63.158	0.00	0.00	0.00	3.60
1626	4772	1.807755	GCATACGAGAAGCCATCTGCA	60.808	52.381	0.00	0.00	44.83	4.41
1698	4844	1.228245	AAGAACCCGTGCATGCACT	60.228	52.632	39.46	26.14	44.16	4.40
1860	5006	1.135689	GCACGACCAAACTTGCCATAG	60.136	52.381	0.00	0.00	0.00	2.23
1977	5123	2.484770	CCAACCTTCTCGAACAAGTCCA	60.485	50.000	3.70	0.00	0.00	4.02
2123	5269	3.198409	TGCTCGACTCAAATGGCATAT	57.802	42.857	0.00	0.00	0.00	1.78
2130	5276	1.131883	GCAGCAATGCTCGACTCAAAT	59.868	47.619	4.03	0.00	36.40	2.32
2221	5367	3.621558	TCTCTGGATCAAGCTCGAGTAA	58.378	45.455	15.13	0.00	0.00	2.24
2383	5529	8.929260	TGATCAGCCATTAGAAATACATGAAT	57.071	30.769	0.00	0.00	0.00	2.57
2592	5739	3.195610	TCATCTCACAGCCTATTTGACGT	59.804	43.478	0.00	0.00	0.00	4.34
2593	5740	3.785486	TCATCTCACAGCCTATTTGACG	58.215	45.455	0.00	0.00	0.00	4.35
2604	5751	6.825213	TCCAAGGACATATTTTCATCTCACAG	59.175	38.462	0.00	0.00	0.00	3.66
2625	5772	5.821470	TCTTGCTGCAATTTCAAATTTCCAA	59.179	32.000	16.38	0.00	0.00	3.53
2672	5819	1.155889	CACACATAAGCAAGTCGCCA	58.844	50.000	0.00	0.00	44.04	5.69
2675	5822	4.597079	ACAAAACACACATAAGCAAGTCG	58.403	39.130	0.00	0.00	0.00	4.18
2705	5852	4.751060	TCTTGAAAACCGTCGCATATAGT	58.249	39.130	0.00	0.00	0.00	2.12
2707	5854	4.509970	CCATCTTGAAAACCGTCGCATATA	59.490	41.667	0.00	0.00	0.00	0.86
2709	5856	2.675844	CCATCTTGAAAACCGTCGCATA	59.324	45.455	0.00	0.00	0.00	3.14
2725	5872	2.290260	TGGTCGAATGAAAGCACCATCT	60.290	45.455	0.00	0.00	31.99	2.90
2730	5877	3.436704	TCTTCATGGTCGAATGAAAGCAC	59.563	43.478	12.36	0.00	43.97	4.40
2739	5886	7.979444	ATAAGAAAACTTCTTCATGGTCGAA	57.021	32.000	4.96	0.00	46.62	3.71
2765	5914	5.729510	TCCATCTGTGTCGACAATTCAATA	58.270	37.500	21.95	5.88	0.00	1.90
2812	5965	9.807649	ACTTACTTATTTGCATTGATGAAATCC	57.192	29.630	0.00	0.00	44.73	3.01
2835	5988	6.225981	ACCTTTTGAATCAAAGAAGCACTT	57.774	33.333	8.51	0.00	40.98	3.16
2836	5989	5.859205	ACCTTTTGAATCAAAGAAGCACT	57.141	34.783	8.51	0.00	34.72	4.40
2837	5990	8.593492	AAATACCTTTTGAATCAAAGAAGCAC	57.407	30.769	8.51	0.00	34.72	4.40
2852	6005	8.721133	AAGTAGAATCCACCAAAATACCTTTT	57.279	30.769	0.00	0.00	34.90	2.27
2878	6031	3.917300	AGAGCTATAGGGGGATAATCCG	58.083	50.000	1.04	0.00	37.43	4.18
2885	6038	3.731431	TGAAACAAGAGCTATAGGGGGA	58.269	45.455	1.04	0.00	0.00	4.81
2932	6085	8.519526	TGAAAAGTGCTCCATACGAAAAATAAT	58.480	29.630	0.00	0.00	0.00	1.28
2933	6086	7.877003	TGAAAAGTGCTCCATACGAAAAATAA	58.123	30.769	0.00	0.00	0.00	1.40
2934	6087	7.441890	TGAAAAGTGCTCCATACGAAAAATA	57.558	32.000	0.00	0.00	0.00	1.40
2935	6088	6.325919	TGAAAAGTGCTCCATACGAAAAAT	57.674	33.333	0.00	0.00	0.00	1.82
2942	6095	4.439305	TTGCATGAAAAGTGCTCCATAC	57.561	40.909	0.00	0.00	42.92	2.39
2949	6102	6.289745	TCTTTGAAATTGCATGAAAAGTGC	57.710	33.333	0.00	0.00	42.81	4.40
2950	6103	9.724839	ATTTTCTTTGAAATTGCATGAAAAGTG	57.275	25.926	21.82	0.00	35.81	3.16
2969	6122	7.016563	AGGTTGGGCTCAATAGAAAATTTTCTT	59.983	33.333	32.37	19.61	46.01	2.52
2972	6125	6.269769	TGAGGTTGGGCTCAATAGAAAATTTT	59.730	34.615	0.27	2.28	35.10	1.82
2975	6128	4.934356	TGAGGTTGGGCTCAATAGAAAAT	58.066	39.130	0.27	0.00	35.10	1.82
3007	6160	9.671279	TTGTCATAGTCATCATAGAAACACAAT	57.329	29.630	0.00	0.00	0.00	2.71
3010	6163	9.317936	TCATTGTCATAGTCATCATAGAAACAC	57.682	33.333	0.00	0.00	0.00	3.32
3113	6269	2.367567	GGCATGTCGAACCCTATAGGAA	59.632	50.000	21.07	0.00	39.89	3.36
3177	6333	5.296748	GGCTTCTTTGTTTTGCAGGATTTA	58.703	37.500	0.00	0.00	0.00	1.40
3216	6372	6.084277	GCAGTAACAAAGGATTAACTTTCGG	58.916	40.000	0.00	0.00	38.56	4.30
3241	6397	5.473039	GCCATCAATGCAAGTTTTTCTACT	58.527	37.500	0.00	0.00	0.00	2.57
3378	6848	4.457257	GGAAAAACAGAGATCAGTCCCTTG	59.543	45.833	0.00	0.00	0.00	3.61
3402	6872	5.351948	TTTCCTTAAAACAAAAGGCAGCT	57.648	34.783	0.00	0.00	42.79	4.24
3403	6873	6.483307	AGATTTTCCTTAAAACAAAAGGCAGC	59.517	34.615	0.00	0.00	42.79	5.25

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.