Multiple sequence alignment - TraesCS1B01G115800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G115800 chr1B 100.000 3508 0 0 1 3508 136166770 136170277 0.000000e+00 6479.0
1 TraesCS1B01G115800 chr1B 88.715 1914 169 33 159 2049 136062806 136064695 0.000000e+00 2294.0
2 TraesCS1B01G115800 chr1B 86.463 1507 142 30 125 1591 134722684 134724168 0.000000e+00 1596.0
3 TraesCS1B01G115800 chr1B 92.267 569 37 5 2063 2625 134731567 134732134 0.000000e+00 800.0
4 TraesCS1B01G115800 chr1B 92.321 560 41 1 2063 2620 136064679 136065238 0.000000e+00 795.0
5 TraesCS1B01G115800 chr1B 94.183 361 19 2 3150 3508 511209375 511209015 1.840000e-152 549.0
6 TraesCS1B01G115800 chr1B 84.222 450 53 15 1605 2049 134731147 134731583 4.190000e-114 422.0
7 TraesCS1B01G115800 chr1B 96.063 127 4 1 3382 3508 614937878 614937753 4.590000e-49 206.0
8 TraesCS1B01G115800 chr1A 92.416 2993 155 32 1 2974 100038129 100041068 0.000000e+00 4204.0
9 TraesCS1B01G115800 chr1A 89.074 1263 108 20 599 1851 100001832 100003074 0.000000e+00 1541.0
10 TraesCS1B01G115800 chr1A 92.857 560 38 1 2063 2620 100003297 100003856 0.000000e+00 811.0
11 TraesCS1B01G115800 chr1D 91.789 2046 117 32 16 2043 81480859 81482871 0.000000e+00 2800.0
12 TraesCS1B01G115800 chr1D 86.735 1960 184 46 125 2043 81366117 81368041 0.000000e+00 2109.0
13 TraesCS1B01G115800 chr1D 94.565 920 36 8 2063 2973 81482860 81483774 0.000000e+00 1410.0
14 TraesCS1B01G115800 chr1D 93.451 565 34 2 2063 2625 81368030 81368593 0.000000e+00 835.0
15 TraesCS1B01G115800 chr2B 94.444 360 18 2 3150 3508 94427148 94426790 1.420000e-153 553.0
16 TraesCS1B01G115800 chr2B 94.656 131 7 0 3378 3508 68788659 68788529 1.650000e-48 204.0
17 TraesCS1B01G115800 chr2B 94.488 127 7 0 3382 3508 83818563 83818437 2.760000e-46 196.0
18 TraesCS1B01G115800 chr7B 93.611 360 18 4 3150 3508 186977880 186978235 1.850000e-147 532.0
19 TraesCS1B01G115800 chr7B 88.189 127 7 5 3246 3366 578444121 578444245 1.010000e-30 145.0
20 TraesCS1B01G115800 chr7B 85.938 64 8 1 1901 1963 578430982 578431045 2.260000e-07 67.6
21 TraesCS1B01G115800 chr5B 93.590 234 14 1 3146 3379 49552972 49553204 7.210000e-92 348.0
22 TraesCS1B01G115800 chr2D 90.598 234 18 1 3150 3379 177801451 177801684 1.220000e-79 307.0
23 TraesCS1B01G115800 chr5D 90.769 195 14 1 3189 3379 439023789 439023595 1.250000e-64 257.0
24 TraesCS1B01G115800 chr5D 90.576 191 12 3 3195 3379 474550835 474551025 7.520000e-62 248.0
25 TraesCS1B01G115800 chr6B 97.638 127 3 0 3382 3508 98589520 98589646 5.900000e-53 219.0
26 TraesCS1B01G115800 chr6B 96.850 127 4 0 3382 3508 98645524 98645650 2.740000e-51 213.0
27 TraesCS1B01G115800 chr6B 96.063 127 5 0 3382 3508 98494054 98494180 1.280000e-49 207.0
28 TraesCS1B01G115800 chr6B 90.741 54 4 1 3099 3151 483526930 483526877 1.750000e-08 71.3
29 TraesCS1B01G115800 chr7A 83.099 213 29 5 3172 3379 27470791 27470581 1.660000e-43 187.0
30 TraesCS1B01G115800 chr7A 93.548 62 4 0 3096 3157 566332715 566332776 3.730000e-15 93.5
31 TraesCS1B01G115800 chr7A 91.935 62 5 0 3096 3157 566272490 566272551 1.730000e-13 87.9
32 TraesCS1B01G115800 chr7A 91.935 62 5 0 3096 3157 566285637 566285698 1.730000e-13 87.9
33 TraesCS1B01G115800 chr7A 91.935 62 5 0 3096 3157 566297126 566297187 1.730000e-13 87.9
34 TraesCS1B01G115800 chr7A 91.935 62 5 0 3096 3157 566308254 566308315 1.730000e-13 87.9
35 TraesCS1B01G115800 chr7A 91.935 62 5 0 3096 3157 566320735 566320796 1.730000e-13 87.9
36 TraesCS1B01G115800 chr6A 92.157 51 4 0 3100 3150 572521602 572521652 4.860000e-09 73.1
37 TraesCS1B01G115800 chr7D 92.157 51 3 1 3100 3149 93027525 93027475 1.750000e-08 71.3
38 TraesCS1B01G115800 chr7D 100.000 30 0 0 1901 1930 535948120 535948149 4.890000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G115800 chr1B 136166770 136170277 3507 False 6479.0 6479 100.0000 1 3508 1 chr1B.!!$F2 3507
1 TraesCS1B01G115800 chr1B 134722684 134724168 1484 False 1596.0 1596 86.4630 125 1591 1 chr1B.!!$F1 1466
2 TraesCS1B01G115800 chr1B 136062806 136065238 2432 False 1544.5 2294 90.5180 159 2620 2 chr1B.!!$F4 2461
3 TraesCS1B01G115800 chr1B 134731147 134732134 987 False 611.0 800 88.2445 1605 2625 2 chr1B.!!$F3 1020
4 TraesCS1B01G115800 chr1A 100038129 100041068 2939 False 4204.0 4204 92.4160 1 2974 1 chr1A.!!$F1 2973
5 TraesCS1B01G115800 chr1A 100001832 100003856 2024 False 1176.0 1541 90.9655 599 2620 2 chr1A.!!$F2 2021
6 TraesCS1B01G115800 chr1D 81480859 81483774 2915 False 2105.0 2800 93.1770 16 2973 2 chr1D.!!$F2 2957
7 TraesCS1B01G115800 chr1D 81366117 81368593 2476 False 1472.0 2109 90.0930 125 2625 2 chr1D.!!$F1 2500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
749 804 0.723414 CTAAGTGCAGCACCATCACG 59.277 55.0 22.41 1.44 34.49 4.35 F
1153 1209 0.317269 CGTCCAGCAGCAAGTGTTTG 60.317 55.0 0.00 0.00 37.36 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1746 1803 0.462789 ACAGGACCACGACGTCTTTT 59.537 50.0 14.70 0.0 33.07 2.27 R
3060 3222 0.036875 GCCAGGCTTACACACTCCTT 59.963 55.0 3.29 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.027129 TCTACGAATAATGAATAAGTTGGTTCG 57.973 33.333 0.00 0.00 40.96 3.95
132 135 5.722021 TTTCTTTTTATCCACAAGCTCCC 57.278 39.130 0.00 0.00 0.00 4.30
233 248 5.585047 ACAACAAACTGAGACACTAAAGGAC 59.415 40.000 0.00 0.00 0.00 3.85
469 490 3.260884 TCACTGAACTGTGTAATCCCCTC 59.739 47.826 10.57 0.00 38.90 4.30
550 603 6.312141 TCTGAATCACCAGATCAAACCATA 57.688 37.500 0.00 0.00 38.18 2.74
554 607 9.948964 CTGAATCACCAGATCAAACCATATATA 57.051 33.333 0.00 0.00 36.29 0.86
579 634 6.874297 TTTTTGCATGAGATAGCGATTTTG 57.126 33.333 0.00 0.00 0.00 2.44
616 671 2.676839 GCATCATCGAGCAGGATAATGG 59.323 50.000 0.00 0.00 0.00 3.16
655 710 2.973224 CACGAAACTGCTTGCAATACAC 59.027 45.455 0.00 0.00 0.00 2.90
749 804 0.723414 CTAAGTGCAGCACCATCACG 59.277 55.000 22.41 1.44 34.49 4.35
796 851 5.664294 ATTGCCATTTTCAGAATGTGCTA 57.336 34.783 10.97 6.41 37.40 3.49
836 891 8.463930 AAATGTTTGTTAACAGGAGAAGATCA 57.536 30.769 8.56 0.00 46.71 2.92
1051 1107 1.065491 TGGTGTGCTCAGTTCTTGTGT 60.065 47.619 0.00 0.00 0.00 3.72
1067 1123 0.533308 GTGTTGTGCCTCGTAACCCA 60.533 55.000 0.00 0.00 0.00 4.51
1074 1130 2.047655 CTCGTAACCCAAGGCGCA 60.048 61.111 10.83 0.00 0.00 6.09
1111 1167 1.135083 CCAGCGATTTCTACGACTGGT 60.135 52.381 16.21 0.00 43.09 4.00
1153 1209 0.317269 CGTCCAGCAGCAAGTGTTTG 60.317 55.000 0.00 0.00 37.36 2.93
1170 1226 0.405198 TTGCTGCCATGAGGGAAGAA 59.595 50.000 0.00 0.00 46.79 2.52
1250 1306 9.457436 TGTACCTCAACTTTCTTCTAAACTTTT 57.543 29.630 0.00 0.00 0.00 2.27
1251 1307 9.932699 GTACCTCAACTTTCTTCTAAACTTTTC 57.067 33.333 0.00 0.00 0.00 2.29
1252 1308 8.809468 ACCTCAACTTTCTTCTAAACTTTTCT 57.191 30.769 0.00 0.00 0.00 2.52
1253 1309 9.901172 ACCTCAACTTTCTTCTAAACTTTTCTA 57.099 29.630 0.00 0.00 0.00 2.10
1305 1361 3.623060 ACTGTTGTGTTGCAGTTACTGAG 59.377 43.478 17.40 3.58 42.61 3.35
1408 1465 3.245803 ACCAGAACTCTGTCAGAGGGTAT 60.246 47.826 29.17 14.23 46.45 2.73
1480 1537 1.949525 GTGTCCTGTGCTGACATTGTT 59.050 47.619 0.00 0.00 43.98 2.83
1510 1567 2.962421 AGCTGGCTATGGAGTACTCTTC 59.038 50.000 21.88 7.47 0.00 2.87
1518 1575 1.540267 TGGAGTACTCTTCGTGAGCAC 59.460 52.381 21.88 2.47 46.41 4.40
1525 1582 2.029828 ACTCTTCGTGAGCACCTTACAG 60.030 50.000 7.81 0.00 46.41 2.74
1526 1583 1.071605 CTTCGTGAGCACCTTACAGC 58.928 55.000 0.00 0.00 0.00 4.40
1548 1605 5.819901 AGCTCTTATACTCCATTTTGTCAGC 59.180 40.000 0.00 0.00 0.00 4.26
1581 1638 7.800380 CAGCTTGTCAAACAAAGTATTGAGTAG 59.200 37.037 0.00 0.00 37.69 2.57
1591 1648 9.804758 AACAAAGTATTGAGTAGCTATGTACTC 57.195 33.333 7.32 7.32 46.34 2.59
1638 1695 3.713764 ACTATGATGTTCTTCTGGGGAGG 59.286 47.826 0.00 0.00 0.00 4.30
1680 1737 3.870955 TCAGGAGCTGACAACGGT 58.129 55.556 0.00 0.00 35.39 4.83
1726 1783 4.461431 TCAGCTCCATCGTACAGAAGTTTA 59.539 41.667 0.00 0.00 0.00 2.01
1776 1833 0.685097 TGGTCCTGTCAGGTAACAGC 59.315 55.000 18.65 9.40 44.34 4.40
1786 1854 3.248602 GTCAGGTAACAGCTGTCACAAAG 59.751 47.826 21.65 10.42 43.70 2.77
1801 1869 4.095782 GTCACAAAGCTAACAAACTCCACA 59.904 41.667 0.00 0.00 0.00 4.17
1805 1873 6.367422 CACAAAGCTAACAAACTCCACAAAAA 59.633 34.615 0.00 0.00 0.00 1.94
1851 1946 2.234908 ACTCTGTGCTACATCCCTGAAC 59.765 50.000 0.00 0.00 0.00 3.18
1864 1959 5.718130 ACATCCCTGAACATGAAATTGTGAT 59.282 36.000 0.00 0.00 0.00 3.06
1886 2010 3.600388 AGTGTAGCCATGCTTAACTCAC 58.400 45.455 0.00 0.00 40.44 3.51
1987 2123 4.090761 TGACCTGATCTTATGGAATGGC 57.909 45.455 0.00 0.00 0.00 4.40
2045 2189 5.408604 ACATGACCTAAATTCTGAACGTCAC 59.591 40.000 0.00 0.00 32.10 3.67
2053 2197 7.860373 CCTAAATTCTGAACGTCACAAATTCAA 59.140 33.333 0.00 0.00 32.19 2.69
2054 2198 9.232082 CTAAATTCTGAACGTCACAAATTCAAA 57.768 29.630 0.00 0.00 32.19 2.69
2055 2199 8.472683 AAATTCTGAACGTCACAAATTCAAAA 57.527 26.923 0.00 0.00 32.19 2.44
2056 2200 8.472683 AATTCTGAACGTCACAAATTCAAAAA 57.527 26.923 0.00 0.00 32.19 1.94
2672 2824 4.093556 GGTGTTTACTTCATCAGCTGCTAC 59.906 45.833 9.47 0.00 0.00 3.58
2680 2832 5.303845 ACTTCATCAGCTGCTACATGATCTA 59.696 40.000 18.90 8.17 31.38 1.98
2784 2938 4.816385 TCCTTCGCATTTCATAATGGTCTC 59.184 41.667 0.00 0.00 41.21 3.36
2820 2974 1.270252 TGAGTGCGAGCTGATGAACAA 60.270 47.619 0.00 0.00 0.00 2.83
2918 3080 2.309528 ACAGTTTGACTCGTCTTGCA 57.690 45.000 0.00 0.00 0.00 4.08
2959 3121 7.277760 GCCATGTGGACAAGAAAATTATTAACC 59.722 37.037 2.55 0.00 37.39 2.85
2974 3136 7.903995 ATTATTAACCAGCAACAACCAATTG 57.096 32.000 0.00 0.00 41.98 2.32
2975 3137 5.543507 ATTAACCAGCAACAACCAATTGA 57.456 34.783 7.12 0.00 39.30 2.57
2976 3138 3.902881 AACCAGCAACAACCAATTGAA 57.097 38.095 7.12 0.00 39.30 2.69
2977 3139 3.457610 ACCAGCAACAACCAATTGAAG 57.542 42.857 7.12 0.00 39.30 3.02
2978 3140 3.030291 ACCAGCAACAACCAATTGAAGA 58.970 40.909 7.12 0.00 39.30 2.87
2979 3141 3.642848 ACCAGCAACAACCAATTGAAGAT 59.357 39.130 7.12 0.00 39.30 2.40
2980 3142 4.832266 ACCAGCAACAACCAATTGAAGATA 59.168 37.500 7.12 0.00 39.30 1.98
2981 3143 5.047802 ACCAGCAACAACCAATTGAAGATAG 60.048 40.000 7.12 0.00 39.30 2.08
2982 3144 5.404946 CAGCAACAACCAATTGAAGATAGG 58.595 41.667 7.12 0.00 39.30 2.57
2983 3145 4.082026 AGCAACAACCAATTGAAGATAGGC 60.082 41.667 7.12 2.60 39.30 3.93
2984 3146 4.082026 GCAACAACCAATTGAAGATAGGCT 60.082 41.667 7.12 0.00 39.30 4.58
2985 3147 5.567423 GCAACAACCAATTGAAGATAGGCTT 60.567 40.000 7.12 0.00 39.30 4.35
2986 3148 6.350110 GCAACAACCAATTGAAGATAGGCTTA 60.350 38.462 7.12 0.00 39.30 3.09
2987 3149 7.601856 CAACAACCAATTGAAGATAGGCTTAA 58.398 34.615 7.12 0.00 39.30 1.85
2988 3150 7.396540 ACAACCAATTGAAGATAGGCTTAAG 57.603 36.000 7.12 0.00 39.30 1.85
2989 3151 6.378280 ACAACCAATTGAAGATAGGCTTAAGG 59.622 38.462 7.12 0.00 39.30 2.69
2990 3152 5.449553 ACCAATTGAAGATAGGCTTAAGGG 58.550 41.667 7.12 0.00 36.83 3.95
2991 3153 5.044105 ACCAATTGAAGATAGGCTTAAGGGT 60.044 40.000 7.12 0.00 36.83 4.34
2992 3154 6.159751 ACCAATTGAAGATAGGCTTAAGGGTA 59.840 38.462 7.12 0.00 36.83 3.69
2993 3155 7.147123 ACCAATTGAAGATAGGCTTAAGGGTAT 60.147 37.037 7.12 0.00 36.83 2.73
2994 3156 7.175641 CCAATTGAAGATAGGCTTAAGGGTATG 59.824 40.741 7.12 0.00 36.83 2.39
2995 3157 6.824958 TTGAAGATAGGCTTAAGGGTATGT 57.175 37.500 4.29 0.00 36.83 2.29
2996 3158 7.924358 TTGAAGATAGGCTTAAGGGTATGTA 57.076 36.000 4.29 0.00 36.83 2.29
2997 3159 7.299246 TGAAGATAGGCTTAAGGGTATGTAC 57.701 40.000 4.29 0.00 36.83 2.90
2998 3160 6.842280 TGAAGATAGGCTTAAGGGTATGTACA 59.158 38.462 4.29 0.00 36.83 2.90
2999 3161 6.667558 AGATAGGCTTAAGGGTATGTACAC 57.332 41.667 4.29 0.00 0.00 2.90
3000 3162 6.382925 AGATAGGCTTAAGGGTATGTACACT 58.617 40.000 4.29 0.00 42.93 3.55
3009 3171 4.350245 AGGGTATGTACACTTAGCAGTCA 58.650 43.478 0.00 0.00 36.28 3.41
3010 3172 4.962995 AGGGTATGTACACTTAGCAGTCAT 59.037 41.667 0.00 0.00 36.28 3.06
3011 3173 5.425539 AGGGTATGTACACTTAGCAGTCATT 59.574 40.000 0.00 0.00 36.28 2.57
3012 3174 6.070194 AGGGTATGTACACTTAGCAGTCATTT 60.070 38.462 0.00 0.00 36.28 2.32
3013 3175 6.258068 GGGTATGTACACTTAGCAGTCATTTC 59.742 42.308 0.00 0.00 0.00 2.17
3014 3176 6.258068 GGTATGTACACTTAGCAGTCATTTCC 59.742 42.308 0.00 0.00 0.00 3.13
3015 3177 4.242475 TGTACACTTAGCAGTCATTTCCG 58.758 43.478 0.00 0.00 0.00 4.30
3016 3178 3.402628 ACACTTAGCAGTCATTTCCGT 57.597 42.857 0.00 0.00 0.00 4.69
3017 3179 4.530710 ACACTTAGCAGTCATTTCCGTA 57.469 40.909 0.00 0.00 0.00 4.02
3018 3180 4.243270 ACACTTAGCAGTCATTTCCGTAC 58.757 43.478 0.00 0.00 0.00 3.67
3019 3181 3.617263 CACTTAGCAGTCATTTCCGTACC 59.383 47.826 0.00 0.00 0.00 3.34
3020 3182 3.259876 ACTTAGCAGTCATTTCCGTACCA 59.740 43.478 0.00 0.00 0.00 3.25
3021 3183 2.094762 AGCAGTCATTTCCGTACCAC 57.905 50.000 0.00 0.00 0.00 4.16
3022 3184 1.346395 AGCAGTCATTTCCGTACCACA 59.654 47.619 0.00 0.00 0.00 4.17
3023 3185 2.027192 AGCAGTCATTTCCGTACCACAT 60.027 45.455 0.00 0.00 0.00 3.21
3024 3186 2.351726 GCAGTCATTTCCGTACCACATC 59.648 50.000 0.00 0.00 0.00 3.06
3025 3187 3.595173 CAGTCATTTCCGTACCACATCA 58.405 45.455 0.00 0.00 0.00 3.07
3026 3188 3.618594 CAGTCATTTCCGTACCACATCAG 59.381 47.826 0.00 0.00 0.00 2.90
3027 3189 3.513912 AGTCATTTCCGTACCACATCAGA 59.486 43.478 0.00 0.00 0.00 3.27
3028 3190 3.617263 GTCATTTCCGTACCACATCAGAC 59.383 47.826 0.00 0.00 0.00 3.51
3029 3191 3.259625 TCATTTCCGTACCACATCAGACA 59.740 43.478 0.00 0.00 0.00 3.41
3030 3192 3.755112 TTTCCGTACCACATCAGACAA 57.245 42.857 0.00 0.00 0.00 3.18
3031 3193 3.755112 TTCCGTACCACATCAGACAAA 57.245 42.857 0.00 0.00 0.00 2.83
3032 3194 3.755112 TCCGTACCACATCAGACAAAA 57.245 42.857 0.00 0.00 0.00 2.44
3033 3195 4.074627 TCCGTACCACATCAGACAAAAA 57.925 40.909 0.00 0.00 0.00 1.94
3034 3196 4.062293 TCCGTACCACATCAGACAAAAAG 58.938 43.478 0.00 0.00 0.00 2.27
3035 3197 3.364964 CCGTACCACATCAGACAAAAAGC 60.365 47.826 0.00 0.00 0.00 3.51
3036 3198 3.498397 CGTACCACATCAGACAAAAAGCT 59.502 43.478 0.00 0.00 0.00 3.74
3037 3199 3.996150 ACCACATCAGACAAAAAGCTG 57.004 42.857 0.00 0.00 0.00 4.24
3038 3200 3.554934 ACCACATCAGACAAAAAGCTGA 58.445 40.909 0.00 0.00 44.43 4.26
3039 3201 3.567164 ACCACATCAGACAAAAAGCTGAG 59.433 43.478 0.00 0.00 43.65 3.35
3040 3202 3.562505 CACATCAGACAAAAAGCTGAGC 58.437 45.455 0.00 0.00 43.65 4.26
3041 3203 3.252701 CACATCAGACAAAAAGCTGAGCT 59.747 43.478 0.00 0.00 43.65 4.09
3042 3204 3.252701 ACATCAGACAAAAAGCTGAGCTG 59.747 43.478 8.16 0.00 43.65 4.24
3043 3205 2.224606 TCAGACAAAAAGCTGAGCTGG 58.775 47.619 8.16 0.51 39.62 4.85
3044 3206 2.158769 TCAGACAAAAAGCTGAGCTGGA 60.159 45.455 8.16 0.00 39.62 3.86
3045 3207 2.818432 CAGACAAAAAGCTGAGCTGGAT 59.182 45.455 8.16 0.00 39.62 3.41
3046 3208 3.255149 CAGACAAAAAGCTGAGCTGGATT 59.745 43.478 8.16 0.61 39.62 3.01
3047 3209 4.456911 CAGACAAAAAGCTGAGCTGGATTA 59.543 41.667 8.16 0.00 39.62 1.75
3048 3210 4.699257 AGACAAAAAGCTGAGCTGGATTAG 59.301 41.667 8.16 0.00 39.62 1.73
3049 3211 4.655963 ACAAAAAGCTGAGCTGGATTAGA 58.344 39.130 8.16 0.00 39.62 2.10
3050 3212 4.699257 ACAAAAAGCTGAGCTGGATTAGAG 59.301 41.667 8.16 1.31 39.62 2.43
3051 3213 4.833478 AAAAGCTGAGCTGGATTAGAGA 57.167 40.909 8.16 0.00 39.62 3.10
3052 3214 5.370875 AAAAGCTGAGCTGGATTAGAGAT 57.629 39.130 8.16 0.00 39.62 2.75
3053 3215 6.491714 AAAAGCTGAGCTGGATTAGAGATA 57.508 37.500 8.16 0.00 39.62 1.98
3054 3216 6.491714 AAAGCTGAGCTGGATTAGAGATAA 57.508 37.500 8.16 0.00 39.62 1.75
3055 3217 5.467035 AGCTGAGCTGGATTAGAGATAAC 57.533 43.478 5.97 0.00 37.57 1.89
3056 3218 4.898265 AGCTGAGCTGGATTAGAGATAACA 59.102 41.667 5.97 0.00 37.57 2.41
3057 3219 4.987912 GCTGAGCTGGATTAGAGATAACAC 59.012 45.833 0.00 0.00 0.00 3.32
3058 3220 5.188327 TGAGCTGGATTAGAGATAACACG 57.812 43.478 0.00 0.00 0.00 4.49
3059 3221 4.887655 TGAGCTGGATTAGAGATAACACGA 59.112 41.667 0.00 0.00 0.00 4.35
3060 3222 5.359860 TGAGCTGGATTAGAGATAACACGAA 59.640 40.000 0.00 0.00 0.00 3.85
3061 3223 6.127451 TGAGCTGGATTAGAGATAACACGAAA 60.127 38.462 0.00 0.00 0.00 3.46
3062 3224 6.276847 AGCTGGATTAGAGATAACACGAAAG 58.723 40.000 0.00 0.00 0.00 2.62
3063 3225 5.463724 GCTGGATTAGAGATAACACGAAAGG 59.536 44.000 0.00 0.00 0.00 3.11
3064 3226 6.683110 GCTGGATTAGAGATAACACGAAAGGA 60.683 42.308 0.00 0.00 0.00 3.36
3065 3227 6.806751 TGGATTAGAGATAACACGAAAGGAG 58.193 40.000 0.00 0.00 0.00 3.69
3066 3228 6.380274 TGGATTAGAGATAACACGAAAGGAGT 59.620 38.462 0.00 0.00 0.00 3.85
3067 3229 6.697892 GGATTAGAGATAACACGAAAGGAGTG 59.302 42.308 0.00 0.00 44.57 3.51
3075 3237 1.798813 CACGAAAGGAGTGTGTAAGCC 59.201 52.381 0.00 0.00 35.08 4.35
3076 3238 1.692519 ACGAAAGGAGTGTGTAAGCCT 59.307 47.619 0.00 0.00 0.00 4.58
3077 3239 2.069273 CGAAAGGAGTGTGTAAGCCTG 58.931 52.381 0.00 0.00 0.00 4.85
3078 3240 2.427506 GAAAGGAGTGTGTAAGCCTGG 58.572 52.381 0.00 0.00 0.00 4.45
3079 3241 0.036875 AAGGAGTGTGTAAGCCTGGC 59.963 55.000 11.65 11.65 0.00 4.85
3080 3242 1.741770 GGAGTGTGTAAGCCTGGCG 60.742 63.158 13.96 0.00 0.00 5.69
3081 3243 2.358737 AGTGTGTAAGCCTGGCGC 60.359 61.111 13.96 0.00 37.98 6.53
3082 3244 3.431725 GTGTGTAAGCCTGGCGCC 61.432 66.667 22.73 22.73 38.78 6.53
3083 3245 3.636231 TGTGTAAGCCTGGCGCCT 61.636 61.111 29.70 9.54 38.78 5.52
3084 3246 2.287274 TGTGTAAGCCTGGCGCCTA 61.287 57.895 29.70 13.31 38.78 3.93
3085 3247 1.521681 GTGTAAGCCTGGCGCCTAG 60.522 63.158 29.70 21.88 38.78 3.02
3097 3259 3.677527 GCCTAGCGCCTACCGATA 58.322 61.111 2.29 0.00 40.02 2.92
3098 3260 2.190756 GCCTAGCGCCTACCGATAT 58.809 57.895 2.29 0.00 37.18 1.63
3099 3261 1.386533 GCCTAGCGCCTACCGATATA 58.613 55.000 2.29 0.00 37.18 0.86
3100 3262 1.955080 GCCTAGCGCCTACCGATATAT 59.045 52.381 2.29 0.00 37.18 0.86
3101 3263 2.361438 GCCTAGCGCCTACCGATATATT 59.639 50.000 2.29 0.00 37.18 1.28
3102 3264 3.181478 GCCTAGCGCCTACCGATATATTT 60.181 47.826 2.29 0.00 37.18 1.40
3103 3265 4.679905 GCCTAGCGCCTACCGATATATTTT 60.680 45.833 2.29 0.00 37.18 1.82
3104 3266 5.416947 CCTAGCGCCTACCGATATATTTTT 58.583 41.667 2.29 0.00 37.18 1.94
3125 3287 6.521151 TTTTTACCCAAAACCGTAGAACAA 57.479 33.333 0.00 0.00 33.39 2.83
3126 3288 6.712179 TTTTACCCAAAACCGTAGAACAAT 57.288 33.333 0.00 0.00 0.00 2.71
3127 3289 6.712179 TTTACCCAAAACCGTAGAACAATT 57.288 33.333 0.00 0.00 0.00 2.32
3128 3290 4.577834 ACCCAAAACCGTAGAACAATTG 57.422 40.909 3.24 3.24 0.00 2.32
3129 3291 3.955551 ACCCAAAACCGTAGAACAATTGT 59.044 39.130 4.92 4.92 0.00 2.71
3130 3292 4.403113 ACCCAAAACCGTAGAACAATTGTT 59.597 37.500 23.49 23.49 41.64 2.83
3170 3332 9.585099 TTATTAAAATAAATGCTTGCCTGAGTG 57.415 29.630 0.00 0.00 0.00 3.51
3171 3333 4.460948 AAATAAATGCTTGCCTGAGTGG 57.539 40.909 0.00 0.00 39.35 4.00
3172 3334 1.838112 TAAATGCTTGCCTGAGTGGG 58.162 50.000 0.00 0.00 36.00 4.61
3173 3335 0.901580 AAATGCTTGCCTGAGTGGGG 60.902 55.000 0.00 0.00 36.00 4.96
3174 3336 1.792757 AATGCTTGCCTGAGTGGGGA 61.793 55.000 0.00 0.00 36.00 4.81
3175 3337 1.578215 ATGCTTGCCTGAGTGGGGAT 61.578 55.000 0.00 0.00 36.00 3.85
3176 3338 1.000396 GCTTGCCTGAGTGGGGATT 60.000 57.895 0.00 0.00 36.00 3.01
3177 3339 1.034292 GCTTGCCTGAGTGGGGATTC 61.034 60.000 0.00 0.00 36.00 2.52
3178 3340 0.745845 CTTGCCTGAGTGGGGATTCG 60.746 60.000 0.00 0.00 36.00 3.34
3179 3341 1.198094 TTGCCTGAGTGGGGATTCGA 61.198 55.000 0.00 0.00 36.00 3.71
3180 3342 1.198094 TGCCTGAGTGGGGATTCGAA 61.198 55.000 0.00 0.00 36.00 3.71
3181 3343 0.744771 GCCTGAGTGGGGATTCGAAC 60.745 60.000 0.00 0.00 36.00 3.95
3182 3344 0.905357 CCTGAGTGGGGATTCGAACT 59.095 55.000 0.00 0.00 0.00 3.01
3183 3345 1.134670 CCTGAGTGGGGATTCGAACTC 60.135 57.143 0.00 2.50 39.59 3.01
3184 3346 1.827969 CTGAGTGGGGATTCGAACTCT 59.172 52.381 12.52 1.86 39.80 3.24
3185 3347 3.024547 CTGAGTGGGGATTCGAACTCTA 58.975 50.000 12.52 0.00 39.80 2.43
3186 3348 3.024547 TGAGTGGGGATTCGAACTCTAG 58.975 50.000 12.52 0.00 39.80 2.43
3187 3349 1.757699 AGTGGGGATTCGAACTCTAGC 59.242 52.381 0.00 0.00 0.00 3.42
3188 3350 1.120530 TGGGGATTCGAACTCTAGCC 58.879 55.000 0.00 0.00 0.00 3.93
3189 3351 0.032267 GGGGATTCGAACTCTAGCCG 59.968 60.000 0.00 0.00 0.00 5.52
3190 3352 0.597898 GGGATTCGAACTCTAGCCGC 60.598 60.000 0.00 0.00 0.00 6.53
3191 3353 0.597898 GGATTCGAACTCTAGCCGCC 60.598 60.000 0.00 0.00 0.00 6.13
3192 3354 0.386113 GATTCGAACTCTAGCCGCCT 59.614 55.000 0.00 0.00 0.00 5.52
3193 3355 1.607628 GATTCGAACTCTAGCCGCCTA 59.392 52.381 0.00 0.00 0.00 3.93
3194 3356 0.737219 TTCGAACTCTAGCCGCCTAC 59.263 55.000 0.00 0.00 0.00 3.18
3195 3357 0.107312 TCGAACTCTAGCCGCCTACT 60.107 55.000 0.00 0.00 0.00 2.57
3196 3358 0.029567 CGAACTCTAGCCGCCTACTG 59.970 60.000 0.00 0.00 0.00 2.74
3197 3359 0.386113 GAACTCTAGCCGCCTACTGG 59.614 60.000 0.00 0.00 0.00 4.00
3207 3369 3.966215 CCTACTGGCACCACAACG 58.034 61.111 0.00 0.00 0.00 4.10
3208 3370 1.070786 CCTACTGGCACCACAACGT 59.929 57.895 0.00 0.00 0.00 3.99
3209 3371 1.227999 CCTACTGGCACCACAACGTG 61.228 60.000 0.00 0.00 36.80 4.49
3231 3393 6.024552 TGGTTGACCAATTGAGCTAAAATC 57.975 37.500 7.12 0.00 44.35 2.17
3232 3394 5.538053 TGGTTGACCAATTGAGCTAAAATCA 59.462 36.000 7.12 0.00 44.35 2.57
3233 3395 5.863935 GGTTGACCAATTGAGCTAAAATCAC 59.136 40.000 7.12 0.00 35.64 3.06
3234 3396 6.294731 GGTTGACCAATTGAGCTAAAATCACT 60.295 38.462 7.12 0.00 35.64 3.41
3235 3397 6.899393 TGACCAATTGAGCTAAAATCACTT 57.101 33.333 7.12 0.00 0.00 3.16
3236 3398 6.680810 TGACCAATTGAGCTAAAATCACTTG 58.319 36.000 7.12 0.00 37.19 3.16
3237 3399 6.265196 TGACCAATTGAGCTAAAATCACTTGT 59.735 34.615 7.12 0.00 36.26 3.16
3238 3400 7.054491 ACCAATTGAGCTAAAATCACTTGTT 57.946 32.000 7.12 0.00 36.26 2.83
3239 3401 8.177119 ACCAATTGAGCTAAAATCACTTGTTA 57.823 30.769 7.12 0.00 36.26 2.41
3240 3402 8.082242 ACCAATTGAGCTAAAATCACTTGTTAC 58.918 33.333 7.12 0.00 36.26 2.50
3241 3403 7.542130 CCAATTGAGCTAAAATCACTTGTTACC 59.458 37.037 7.12 0.00 36.26 2.85
3242 3404 6.569179 TTGAGCTAAAATCACTTGTTACCC 57.431 37.500 0.00 0.00 0.00 3.69
3243 3405 5.626142 TGAGCTAAAATCACTTGTTACCCA 58.374 37.500 0.00 0.00 0.00 4.51
3244 3406 6.245408 TGAGCTAAAATCACTTGTTACCCAT 58.755 36.000 0.00 0.00 0.00 4.00
3245 3407 6.719370 TGAGCTAAAATCACTTGTTACCCATT 59.281 34.615 0.00 0.00 0.00 3.16
3246 3408 7.232534 TGAGCTAAAATCACTTGTTACCCATTT 59.767 33.333 0.00 0.00 0.00 2.32
3247 3409 7.378181 AGCTAAAATCACTTGTTACCCATTTG 58.622 34.615 0.00 0.00 0.00 2.32
3248 3410 7.232534 AGCTAAAATCACTTGTTACCCATTTGA 59.767 33.333 0.00 0.00 0.00 2.69
3249 3411 7.328493 GCTAAAATCACTTGTTACCCATTTGAC 59.672 37.037 0.00 0.00 0.00 3.18
3250 3412 5.371115 AATCACTTGTTACCCATTTGACG 57.629 39.130 0.00 0.00 0.00 4.35
3251 3413 2.550606 TCACTTGTTACCCATTTGACGC 59.449 45.455 0.00 0.00 0.00 5.19
3252 3414 2.292016 CACTTGTTACCCATTTGACGCA 59.708 45.455 0.00 0.00 0.00 5.24
3253 3415 2.952978 ACTTGTTACCCATTTGACGCAA 59.047 40.909 0.00 0.00 0.00 4.85
3254 3416 3.243267 ACTTGTTACCCATTTGACGCAAC 60.243 43.478 0.00 0.00 0.00 4.17
3255 3417 2.577700 TGTTACCCATTTGACGCAACT 58.422 42.857 0.00 0.00 0.00 3.16
3256 3418 2.292016 TGTTACCCATTTGACGCAACTG 59.708 45.455 3.94 3.94 0.00 3.16
3257 3419 2.550606 GTTACCCATTTGACGCAACTGA 59.449 45.455 10.09 0.00 0.00 3.41
3258 3420 1.686355 ACCCATTTGACGCAACTGAA 58.314 45.000 10.09 0.00 0.00 3.02
3259 3421 1.336755 ACCCATTTGACGCAACTGAAC 59.663 47.619 10.09 0.00 0.00 3.18
3260 3422 1.336440 CCCATTTGACGCAACTGAACA 59.664 47.619 10.09 0.00 0.00 3.18
3261 3423 2.030007 CCCATTTGACGCAACTGAACAT 60.030 45.455 10.09 0.00 0.00 2.71
3262 3424 3.552684 CCCATTTGACGCAACTGAACATT 60.553 43.478 10.09 0.00 0.00 2.71
3263 3425 4.050553 CCATTTGACGCAACTGAACATTT 58.949 39.130 10.09 0.00 0.00 2.32
3264 3426 4.507388 CCATTTGACGCAACTGAACATTTT 59.493 37.500 10.09 0.00 0.00 1.82
3265 3427 5.689514 CCATTTGACGCAACTGAACATTTTA 59.310 36.000 10.09 0.00 0.00 1.52
3266 3428 6.365789 CCATTTGACGCAACTGAACATTTTAT 59.634 34.615 10.09 0.00 0.00 1.40
3267 3429 6.984740 TTTGACGCAACTGAACATTTTATC 57.015 33.333 0.00 0.00 0.00 1.75
3268 3430 5.041951 TGACGCAACTGAACATTTTATCC 57.958 39.130 0.00 0.00 0.00 2.59
3269 3431 4.759693 TGACGCAACTGAACATTTTATCCT 59.240 37.500 0.00 0.00 0.00 3.24
3270 3432 5.240623 TGACGCAACTGAACATTTTATCCTT 59.759 36.000 0.00 0.00 0.00 3.36
3271 3433 5.699839 ACGCAACTGAACATTTTATCCTTC 58.300 37.500 0.00 0.00 0.00 3.46
3272 3434 5.473504 ACGCAACTGAACATTTTATCCTTCT 59.526 36.000 0.00 0.00 0.00 2.85
3273 3435 6.016276 ACGCAACTGAACATTTTATCCTTCTT 60.016 34.615 0.00 0.00 0.00 2.52
3274 3436 6.863126 CGCAACTGAACATTTTATCCTTCTTT 59.137 34.615 0.00 0.00 0.00 2.52
3275 3437 8.020819 CGCAACTGAACATTTTATCCTTCTTTA 58.979 33.333 0.00 0.00 0.00 1.85
3276 3438 9.129209 GCAACTGAACATTTTATCCTTCTTTAC 57.871 33.333 0.00 0.00 0.00 2.01
3281 3443 9.158233 TGAACATTTTATCCTTCTTTACTACCG 57.842 33.333 0.00 0.00 0.00 4.02
3282 3444 7.549615 ACATTTTATCCTTCTTTACTACCGC 57.450 36.000 0.00 0.00 0.00 5.68
3283 3445 7.107542 ACATTTTATCCTTCTTTACTACCGCA 58.892 34.615 0.00 0.00 0.00 5.69
3284 3446 7.773690 ACATTTTATCCTTCTTTACTACCGCAT 59.226 33.333 0.00 0.00 0.00 4.73
3285 3447 8.621286 CATTTTATCCTTCTTTACTACCGCATT 58.379 33.333 0.00 0.00 0.00 3.56
3286 3448 7.548196 TTTATCCTTCTTTACTACCGCATTG 57.452 36.000 0.00 0.00 0.00 2.82
3287 3449 3.869065 TCCTTCTTTACTACCGCATTGG 58.131 45.455 0.00 0.00 46.41 3.16
3288 3450 2.943033 CCTTCTTTACTACCGCATTGGG 59.057 50.000 0.00 0.00 44.64 4.12
3289 3451 3.370103 CCTTCTTTACTACCGCATTGGGA 60.370 47.826 1.69 0.00 44.64 4.37
3290 3452 3.985019 TCTTTACTACCGCATTGGGAA 57.015 42.857 1.69 0.00 44.64 3.97
3291 3453 4.289238 TCTTTACTACCGCATTGGGAAA 57.711 40.909 1.69 0.00 44.64 3.13
3292 3454 4.653868 TCTTTACTACCGCATTGGGAAAA 58.346 39.130 1.69 0.00 44.64 2.29
3293 3455 4.698304 TCTTTACTACCGCATTGGGAAAAG 59.302 41.667 1.69 4.77 44.64 2.27
3294 3456 1.834188 ACTACCGCATTGGGAAAAGG 58.166 50.000 1.69 0.00 44.64 3.11
3295 3457 0.455815 CTACCGCATTGGGAAAAGGC 59.544 55.000 1.69 0.00 44.64 4.35
3296 3458 0.251386 TACCGCATTGGGAAAAGGCA 60.251 50.000 1.69 0.00 44.64 4.75
3297 3459 0.904394 ACCGCATTGGGAAAAGGCAT 60.904 50.000 1.69 0.00 44.64 4.40
3298 3460 0.249955 CCGCATTGGGAAAAGGCATT 59.750 50.000 1.69 0.00 0.00 3.56
3299 3461 1.480137 CCGCATTGGGAAAAGGCATTA 59.520 47.619 1.69 0.00 0.00 1.90
3300 3462 2.102925 CCGCATTGGGAAAAGGCATTAT 59.897 45.455 1.69 0.00 0.00 1.28
3301 3463 3.320541 CCGCATTGGGAAAAGGCATTATA 59.679 43.478 1.69 0.00 0.00 0.98
3302 3464 4.021192 CCGCATTGGGAAAAGGCATTATAT 60.021 41.667 1.69 0.00 0.00 0.86
3303 3465 5.163513 CGCATTGGGAAAAGGCATTATATC 58.836 41.667 0.00 0.00 0.00 1.63
3304 3466 5.047802 CGCATTGGGAAAAGGCATTATATCT 60.048 40.000 0.00 0.00 0.00 1.98
3305 3467 6.517194 CGCATTGGGAAAAGGCATTATATCTT 60.517 38.462 0.00 0.00 0.00 2.40
3306 3468 7.219322 GCATTGGGAAAAGGCATTATATCTTT 58.781 34.615 0.00 0.00 32.77 2.52
3307 3469 7.716560 GCATTGGGAAAAGGCATTATATCTTTT 59.283 33.333 0.00 0.00 41.59 2.27
3308 3470 9.048446 CATTGGGAAAAGGCATTATATCTTTTG 57.952 33.333 5.21 0.00 39.78 2.44
3309 3471 7.969690 TGGGAAAAGGCATTATATCTTTTGA 57.030 32.000 5.21 0.00 39.78 2.69
3310 3472 8.551682 TGGGAAAAGGCATTATATCTTTTGAT 57.448 30.769 5.21 0.00 39.78 2.57
3311 3473 8.991275 TGGGAAAAGGCATTATATCTTTTGATT 58.009 29.630 5.21 0.00 39.78 2.57
3312 3474 9.836864 GGGAAAAGGCATTATATCTTTTGATTT 57.163 29.630 5.21 0.00 39.78 2.17
3336 3498 5.585500 TTTTCACTAGTGCGTCATGTTAC 57.415 39.130 18.45 0.00 0.00 2.50
3337 3499 4.514781 TTCACTAGTGCGTCATGTTACT 57.485 40.909 18.45 0.00 0.00 2.24
3338 3500 5.632244 TTCACTAGTGCGTCATGTTACTA 57.368 39.130 18.45 0.00 0.00 1.82
3339 3501 5.632244 TCACTAGTGCGTCATGTTACTAA 57.368 39.130 18.45 0.00 0.00 2.24
3340 3502 5.396484 TCACTAGTGCGTCATGTTACTAAC 58.604 41.667 18.45 0.00 0.00 2.34
3341 3503 5.182570 TCACTAGTGCGTCATGTTACTAACT 59.817 40.000 18.45 0.00 0.00 2.24
3342 3504 6.372381 TCACTAGTGCGTCATGTTACTAACTA 59.628 38.462 18.45 0.00 0.00 2.24
3343 3505 7.066645 TCACTAGTGCGTCATGTTACTAACTAT 59.933 37.037 18.45 0.00 0.00 2.12
3344 3506 8.340443 CACTAGTGCGTCATGTTACTAACTATA 58.660 37.037 10.54 0.00 0.00 1.31
3345 3507 8.557864 ACTAGTGCGTCATGTTACTAACTATAG 58.442 37.037 0.00 0.00 35.14 1.31
3346 3508 7.330900 AGTGCGTCATGTTACTAACTATAGT 57.669 36.000 0.00 0.00 44.53 2.12
3347 3509 7.194278 AGTGCGTCATGTTACTAACTATAGTG 58.806 38.462 6.06 0.00 42.37 2.74
3348 3510 6.417044 GTGCGTCATGTTACTAACTATAGTGG 59.583 42.308 6.06 5.43 42.37 4.00
3349 3511 5.919141 GCGTCATGTTACTAACTATAGTGGG 59.081 44.000 6.06 5.07 42.37 4.61
3350 3512 6.238842 GCGTCATGTTACTAACTATAGTGGGA 60.239 42.308 6.06 0.00 42.37 4.37
3351 3513 7.361127 CGTCATGTTACTAACTATAGTGGGAG 58.639 42.308 6.06 7.11 42.37 4.30
3352 3514 7.228108 CGTCATGTTACTAACTATAGTGGGAGA 59.772 40.741 6.06 0.00 42.37 3.71
3353 3515 8.569641 GTCATGTTACTAACTATAGTGGGAGAG 58.430 40.741 6.06 2.30 42.37 3.20
3354 3516 7.724506 TCATGTTACTAACTATAGTGGGAGAGG 59.275 40.741 6.06 0.00 42.37 3.69
3355 3517 5.832060 TGTTACTAACTATAGTGGGAGAGGC 59.168 44.000 6.06 2.08 42.37 4.70
3356 3518 4.537945 ACTAACTATAGTGGGAGAGGCA 57.462 45.455 6.06 0.00 40.88 4.75
3357 3519 5.081315 ACTAACTATAGTGGGAGAGGCAT 57.919 43.478 6.06 0.00 40.88 4.40
3358 3520 6.215515 ACTAACTATAGTGGGAGAGGCATA 57.784 41.667 6.06 0.00 40.88 3.14
3359 3521 6.011481 ACTAACTATAGTGGGAGAGGCATAC 58.989 44.000 6.06 0.00 40.88 2.39
3360 3522 4.471078 ACTATAGTGGGAGAGGCATACA 57.529 45.455 4.10 0.00 0.00 2.29
3361 3523 5.017093 ACTATAGTGGGAGAGGCATACAT 57.983 43.478 4.10 0.00 0.00 2.29
3362 3524 4.774726 ACTATAGTGGGAGAGGCATACATG 59.225 45.833 4.10 0.00 0.00 3.21
3363 3525 1.885049 AGTGGGAGAGGCATACATGT 58.115 50.000 2.69 2.69 0.00 3.21
3364 3526 2.200081 AGTGGGAGAGGCATACATGTT 58.800 47.619 2.30 0.00 0.00 2.71
3365 3527 2.578021 AGTGGGAGAGGCATACATGTTT 59.422 45.455 2.30 0.00 0.00 2.83
3366 3528 2.945668 GTGGGAGAGGCATACATGTTTC 59.054 50.000 2.30 0.00 0.00 2.78
3367 3529 2.846206 TGGGAGAGGCATACATGTTTCT 59.154 45.455 2.30 0.00 0.00 2.52
3368 3530 4.037222 TGGGAGAGGCATACATGTTTCTA 58.963 43.478 2.30 0.00 0.00 2.10
3369 3531 4.473196 TGGGAGAGGCATACATGTTTCTAA 59.527 41.667 2.30 0.00 0.00 2.10
3370 3532 5.045213 TGGGAGAGGCATACATGTTTCTAAA 60.045 40.000 2.30 0.00 0.00 1.85
3371 3533 6.064717 GGGAGAGGCATACATGTTTCTAAAT 58.935 40.000 2.30 0.00 0.00 1.40
3372 3534 6.205658 GGGAGAGGCATACATGTTTCTAAATC 59.794 42.308 2.30 0.00 0.00 2.17
3373 3535 6.767902 GGAGAGGCATACATGTTTCTAAATCA 59.232 38.462 2.30 0.00 0.00 2.57
3374 3536 7.446625 GGAGAGGCATACATGTTTCTAAATCAT 59.553 37.037 2.30 0.00 0.00 2.45
3375 3537 9.494271 GAGAGGCATACATGTTTCTAAATCATA 57.506 33.333 2.30 0.00 0.00 2.15
3396 3558 9.699410 ATCATATTTCAAGAAATCTAACCACCA 57.301 29.630 11.03 0.00 40.99 4.17
3397 3559 9.177608 TCATATTTCAAGAAATCTAACCACCAG 57.822 33.333 11.03 0.00 40.99 4.00
3398 3560 8.960591 CATATTTCAAGAAATCTAACCACCAGT 58.039 33.333 11.03 0.00 40.99 4.00
3399 3561 7.839680 ATTTCAAGAAATCTAACCACCAGTT 57.160 32.000 2.31 0.00 38.23 3.16
3400 3562 6.633500 TTCAAGAAATCTAACCACCAGTTG 57.367 37.500 0.00 0.00 39.67 3.16
3401 3563 5.935945 TCAAGAAATCTAACCACCAGTTGA 58.064 37.500 0.00 0.00 39.67 3.18
3402 3564 5.763204 TCAAGAAATCTAACCACCAGTTGAC 59.237 40.000 0.00 0.00 39.67 3.18
3403 3565 5.568620 AGAAATCTAACCACCAGTTGACT 57.431 39.130 0.00 0.00 39.67 3.41
3404 3566 5.308825 AGAAATCTAACCACCAGTTGACTG 58.691 41.667 4.15 4.15 39.67 3.51
3414 3576 1.148310 CAGTTGACTGGTGGTTAGCG 58.852 55.000 3.19 0.00 40.20 4.26
3415 3577 0.756903 AGTTGACTGGTGGTTAGCGT 59.243 50.000 0.00 0.00 0.00 5.07
3416 3578 1.145803 GTTGACTGGTGGTTAGCGTC 58.854 55.000 0.00 0.00 0.00 5.19
3417 3579 0.753867 TTGACTGGTGGTTAGCGTCA 59.246 50.000 0.00 0.00 36.67 4.35
3418 3580 0.317160 TGACTGGTGGTTAGCGTCAG 59.683 55.000 0.00 3.15 35.00 3.51
3419 3581 0.389948 GACTGGTGGTTAGCGTCAGG 60.390 60.000 8.21 0.00 32.28 3.86
3420 3582 1.741770 CTGGTGGTTAGCGTCAGGC 60.742 63.158 0.00 0.00 44.05 4.85
3431 3593 3.782042 GTCAGGCACGGACGATTC 58.218 61.111 0.00 0.00 44.39 2.52
3432 3594 1.215647 GTCAGGCACGGACGATTCT 59.784 57.895 0.00 0.00 44.39 2.40
3433 3595 1.078759 GTCAGGCACGGACGATTCTG 61.079 60.000 0.00 3.07 44.39 3.02
3434 3596 1.079819 CAGGCACGGACGATTCTGT 60.080 57.895 0.00 0.00 42.59 3.41
3435 3597 0.670546 CAGGCACGGACGATTCTGTT 60.671 55.000 0.00 0.00 39.54 3.16
3436 3598 0.389948 AGGCACGGACGATTCTGTTC 60.390 55.000 0.00 0.00 39.54 3.18
3437 3599 1.683790 GGCACGGACGATTCTGTTCG 61.684 60.000 0.00 7.48 46.35 3.95
3438 3600 0.731514 GCACGGACGATTCTGTTCGA 60.732 55.000 13.65 0.00 43.64 3.71
3439 3601 1.909376 CACGGACGATTCTGTTCGAT 58.091 50.000 13.65 0.16 43.64 3.59
3440 3602 1.846782 CACGGACGATTCTGTTCGATC 59.153 52.381 13.65 0.00 43.64 3.69
3441 3603 1.113253 CGGACGATTCTGTTCGATCG 58.887 55.000 9.36 9.36 43.64 3.69
3442 3604 1.267882 CGGACGATTCTGTTCGATCGA 60.268 52.381 15.15 15.15 43.64 3.59
3443 3605 2.376956 GGACGATTCTGTTCGATCGAG 58.623 52.381 18.54 7.22 41.62 4.04
3444 3606 1.776333 GACGATTCTGTTCGATCGAGC 59.224 52.381 23.20 23.20 41.62 5.03
3445 3607 0.767108 CGATTCTGTTCGATCGAGCG 59.233 55.000 24.03 18.51 41.62 5.03
3446 3608 1.594760 CGATTCTGTTCGATCGAGCGA 60.595 52.381 23.46 23.46 41.62 4.93
3447 3609 2.656085 GATTCTGTTCGATCGAGCGAT 58.344 47.619 27.67 17.85 40.35 4.58
3448 3610 2.561733 TTCTGTTCGATCGAGCGATT 57.438 45.000 27.67 0.00 40.35 3.34
3449 3611 2.561733 TCTGTTCGATCGAGCGATTT 57.438 45.000 27.67 0.00 40.35 2.17
3450 3612 2.876091 TCTGTTCGATCGAGCGATTTT 58.124 42.857 27.67 0.00 40.35 1.82
3451 3613 2.852413 TCTGTTCGATCGAGCGATTTTC 59.148 45.455 27.67 16.85 40.35 2.29
3452 3614 2.854777 CTGTTCGATCGAGCGATTTTCT 59.145 45.455 27.67 0.00 40.35 2.52
3453 3615 3.250744 TGTTCGATCGAGCGATTTTCTT 58.749 40.909 27.67 0.00 40.35 2.52
3454 3616 3.678072 TGTTCGATCGAGCGATTTTCTTT 59.322 39.130 27.67 0.00 40.35 2.52
3455 3617 4.151689 TGTTCGATCGAGCGATTTTCTTTT 59.848 37.500 27.67 0.00 40.35 2.27
3456 3618 4.921470 TCGATCGAGCGATTTTCTTTTT 57.079 36.364 23.46 0.00 35.01 1.94
3457 3619 4.882447 TCGATCGAGCGATTTTCTTTTTC 58.118 39.130 23.46 0.00 35.01 2.29
3458 3620 4.625742 TCGATCGAGCGATTTTCTTTTTCT 59.374 37.500 23.46 0.00 35.01 2.52
3459 3621 4.952633 CGATCGAGCGATTTTCTTTTTCTC 59.047 41.667 20.02 0.00 34.60 2.87
3460 3622 4.663636 TCGAGCGATTTTCTTTTTCTCC 57.336 40.909 0.00 0.00 0.00 3.71
3461 3623 3.435671 TCGAGCGATTTTCTTTTTCTCCC 59.564 43.478 0.00 0.00 0.00 4.30
3462 3624 3.725010 CGAGCGATTTTCTTTTTCTCCCG 60.725 47.826 0.00 0.00 0.00 5.14
3463 3625 2.095212 AGCGATTTTCTTTTTCTCCCGC 60.095 45.455 0.00 0.00 40.31 6.13
3464 3626 2.505866 CGATTTTCTTTTTCTCCCGCG 58.494 47.619 0.00 0.00 0.00 6.46
3465 3627 2.095919 CGATTTTCTTTTTCTCCCGCGT 60.096 45.455 4.92 0.00 0.00 6.01
3466 3628 3.489444 GATTTTCTTTTTCTCCCGCGTC 58.511 45.455 4.92 0.00 0.00 5.19
3467 3629 0.863144 TTTCTTTTTCTCCCGCGTCG 59.137 50.000 4.92 0.00 0.00 5.12
3468 3630 1.562575 TTCTTTTTCTCCCGCGTCGC 61.563 55.000 7.29 7.29 0.00 5.19
3479 3641 3.607987 GCGTCGCGTTCCATCGAG 61.608 66.667 5.77 0.00 35.21 4.04
3480 3642 3.607987 CGTCGCGTTCCATCGAGC 61.608 66.667 5.77 0.00 35.21 5.03
3484 3646 3.706140 GCGTTCCATCGAGCGATT 58.294 55.556 0.00 0.00 44.63 3.34
3485 3647 2.006772 GCGTTCCATCGAGCGATTT 58.993 52.632 0.00 0.00 44.63 2.17
3486 3648 0.373716 GCGTTCCATCGAGCGATTTT 59.626 50.000 0.00 0.00 44.63 1.82
3487 3649 1.592350 GCGTTCCATCGAGCGATTTTC 60.592 52.381 0.00 0.00 44.63 2.29
3488 3650 1.927174 CGTTCCATCGAGCGATTTTCT 59.073 47.619 2.12 0.00 44.63 2.52
3489 3651 2.348666 CGTTCCATCGAGCGATTTTCTT 59.651 45.455 2.12 0.00 44.63 2.52
3490 3652 3.181520 CGTTCCATCGAGCGATTTTCTTT 60.182 43.478 2.12 0.00 44.63 2.52
3491 3653 4.669197 CGTTCCATCGAGCGATTTTCTTTT 60.669 41.667 2.12 0.00 44.63 2.27
3492 3654 4.600012 TCCATCGAGCGATTTTCTTTTC 57.400 40.909 2.12 0.00 31.62 2.29
3493 3655 3.374058 TCCATCGAGCGATTTTCTTTTCC 59.626 43.478 2.12 0.00 31.62 3.13
3494 3656 3.375299 CCATCGAGCGATTTTCTTTTCCT 59.625 43.478 2.12 0.00 31.62 3.36
3495 3657 4.494855 CCATCGAGCGATTTTCTTTTCCTC 60.495 45.833 2.12 0.00 31.62 3.71
3496 3658 3.000727 TCGAGCGATTTTCTTTTCCTCC 58.999 45.455 0.00 0.00 0.00 4.30
3497 3659 2.096013 CGAGCGATTTTCTTTTCCTCCC 59.904 50.000 0.00 0.00 0.00 4.30
3498 3660 2.084546 AGCGATTTTCTTTTCCTCCCG 58.915 47.619 0.00 0.00 0.00 5.14
3499 3661 1.467543 GCGATTTTCTTTTCCTCCCGC 60.468 52.381 0.00 0.00 0.00 6.13
3500 3662 1.810151 CGATTTTCTTTTCCTCCCGCA 59.190 47.619 0.00 0.00 0.00 5.69
3501 3663 2.423538 CGATTTTCTTTTCCTCCCGCAT 59.576 45.455 0.00 0.00 0.00 4.73
3502 3664 3.487544 CGATTTTCTTTTCCTCCCGCATC 60.488 47.826 0.00 0.00 0.00 3.91
3503 3665 1.448985 TTTCTTTTCCTCCCGCATCG 58.551 50.000 0.00 0.00 0.00 3.84
3504 3666 0.323629 TTCTTTTCCTCCCGCATCGT 59.676 50.000 0.00 0.00 0.00 3.73
3505 3667 0.323629 TCTTTTCCTCCCGCATCGTT 59.676 50.000 0.00 0.00 0.00 3.85
3506 3668 0.447801 CTTTTCCTCCCGCATCGTTG 59.552 55.000 0.00 0.00 0.00 4.10
3507 3669 0.035598 TTTTCCTCCCGCATCGTTGA 59.964 50.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
469 490 2.932614 CGTCAAGTGCCTCTCCATTTAG 59.067 50.000 0.00 0.00 0.00 1.85
559 612 5.565592 AACAAAATCGCTATCTCATGCAA 57.434 34.783 0.00 0.00 0.00 4.08
579 634 0.035056 ATGCAGAGCCTGGTGGTAAC 60.035 55.000 0.00 0.00 35.27 2.50
655 710 5.755849 AGACCCAACCATAGGAAATTGTAG 58.244 41.667 0.00 0.00 0.00 2.74
695 750 3.796844 GCCTTTTTGTCTCAAGTCCAAGC 60.797 47.826 0.00 0.00 0.00 4.01
749 804 0.462759 GCCATGGTGGAGTCACTAGC 60.463 60.000 14.67 0.00 40.96 3.42
813 868 7.173907 CACTGATCTTCTCCTGTTAACAAACAT 59.826 37.037 10.03 0.00 31.47 2.71
974 1030 7.147966 TGTCTCAACACTTACAGTCTCACTTAA 60.148 37.037 0.00 0.00 0.00 1.85
1051 1107 0.250553 CCTTGGGTTACGAGGCACAA 60.251 55.000 0.00 0.00 43.78 3.33
1074 1130 0.390124 TGGTTAACTCGTCGCACCTT 59.610 50.000 5.42 0.00 0.00 3.50
1111 1167 2.717044 CGTACACTCCGGGGCATGA 61.717 63.158 0.00 0.00 0.00 3.07
1153 1209 1.034292 GGTTCTTCCCTCATGGCAGC 61.034 60.000 0.00 0.00 0.00 5.25
1170 1226 2.444895 GAGGCTCCCATCCTCGGT 60.445 66.667 2.15 0.00 40.51 4.69
1275 1331 5.364778 ACTGCAACACAACAGTAGATGTAA 58.635 37.500 0.00 0.00 45.09 2.41
1305 1361 3.312828 TGCATACACCGCAACATTTTTC 58.687 40.909 0.00 0.00 36.17 2.29
1369 1426 3.964031 TCTGGTTGGGTAGTGCAAATTTT 59.036 39.130 0.00 0.00 0.00 1.82
1408 1465 0.530288 TGATTGCGTCGATGACCTCA 59.470 50.000 9.31 4.19 0.00 3.86
1518 1575 7.770897 ACAAAATGGAGTATAAGAGCTGTAAGG 59.229 37.037 0.00 0.00 0.00 2.69
1525 1582 5.819901 AGCTGACAAAATGGAGTATAAGAGC 59.180 40.000 0.00 0.00 0.00 4.09
1526 1583 7.981789 TGTAGCTGACAAAATGGAGTATAAGAG 59.018 37.037 0.00 0.00 34.15 2.85
1548 1605 6.498304 ACTTTGTTTGACAAGCTGAATGTAG 58.502 36.000 3.59 0.00 39.53 2.74
1565 1622 9.804758 GAGTACATAGCTACTCAATACTTTGTT 57.195 33.333 9.10 0.00 41.62 2.83
1581 1638 7.010923 CCACTCTGAAAAGAATGAGTACATAGC 59.989 40.741 0.00 0.00 37.64 2.97
1591 1648 2.751806 GCCCTCCACTCTGAAAAGAATG 59.248 50.000 0.00 0.00 0.00 2.67
1595 1652 0.695347 AGGCCCTCCACTCTGAAAAG 59.305 55.000 0.00 0.00 33.74 2.27
1638 1695 2.579738 GCCTTCAGACCGTCCCTC 59.420 66.667 0.00 0.00 0.00 4.30
1746 1803 0.462789 ACAGGACCACGACGTCTTTT 59.537 50.000 14.70 0.00 33.07 2.27
1776 1833 4.335315 TGGAGTTTGTTAGCTTTGTGACAG 59.665 41.667 0.00 0.00 0.00 3.51
1806 1874 9.726438 AGTTTAATTCTAGTTGCTAGTTGTGAT 57.274 29.630 3.48 0.00 35.72 3.06
1810 1878 9.209175 ACAGAGTTTAATTCTAGTTGCTAGTTG 57.791 33.333 3.48 0.00 35.72 3.16
1811 1879 9.209175 CACAGAGTTTAATTCTAGTTGCTAGTT 57.791 33.333 3.48 0.00 35.72 2.24
1812 1880 7.332182 GCACAGAGTTTAATTCTAGTTGCTAGT 59.668 37.037 9.20 0.00 35.72 2.57
1813 1881 7.547370 AGCACAGAGTTTAATTCTAGTTGCTAG 59.453 37.037 14.31 0.00 35.57 3.42
1814 1882 7.386851 AGCACAGAGTTTAATTCTAGTTGCTA 58.613 34.615 14.31 0.00 0.00 3.49
1815 1883 6.234177 AGCACAGAGTTTAATTCTAGTTGCT 58.766 36.000 11.75 11.75 0.00 3.91
1816 1884 6.487689 AGCACAGAGTTTAATTCTAGTTGC 57.512 37.500 8.71 8.71 0.00 4.17
1831 1899 2.234661 TGTTCAGGGATGTAGCACAGAG 59.765 50.000 0.00 0.00 0.00 3.35
1851 1946 6.682423 TGGCTACACTATCACAATTTCATG 57.318 37.500 0.00 0.00 0.00 3.07
1864 1959 4.221924 TGTGAGTTAAGCATGGCTACACTA 59.778 41.667 0.00 0.00 38.25 2.74
1886 2010 6.481644 AGTTTCAGAACTAGTTGCTTCTTCTG 59.518 38.462 14.14 12.12 44.13 3.02
1987 2123 7.803189 ACAAAATAGAGTTATTTGTTCTGCACG 59.197 33.333 0.00 0.00 38.99 5.34
2020 2157 5.995282 TGACGTTCAGAATTTAGGTCATGTT 59.005 36.000 0.00 0.00 33.33 2.71
2054 2198 9.634163 GGGTTTCACGTTCAGAATTATTATTTT 57.366 29.630 0.00 0.00 0.00 1.82
2055 2199 7.966204 CGGGTTTCACGTTCAGAATTATTATTT 59.034 33.333 0.00 0.00 0.00 1.40
2056 2200 7.334921 TCGGGTTTCACGTTCAGAATTATTATT 59.665 33.333 0.00 0.00 0.00 1.40
2141 2285 3.760035 TCGGCCGAGCTCTTGGTC 61.760 66.667 27.28 7.19 36.48 4.02
2348 2492 3.225798 GCCTTGGTGGTGCTTGCA 61.226 61.111 0.00 0.00 38.35 4.08
2655 2807 5.303845 AGATCATGTAGCAGCTGATGAAGTA 59.696 40.000 20.43 0.00 30.00 2.24
2748 2900 4.060038 TGCGAAGGAGTATTTGATCCTC 57.940 45.455 0.00 0.00 45.39 3.71
2750 2902 5.296780 TGAAATGCGAAGGAGTATTTGATCC 59.703 40.000 0.00 0.00 36.74 3.36
2760 2912 4.818546 AGACCATTATGAAATGCGAAGGAG 59.181 41.667 0.00 0.00 41.06 3.69
2761 2913 4.780815 AGACCATTATGAAATGCGAAGGA 58.219 39.130 0.00 0.00 41.06 3.36
2762 2914 4.576053 TGAGACCATTATGAAATGCGAAGG 59.424 41.667 0.00 0.00 41.06 3.46
2784 2938 4.591202 GCACTCAAACCACGATCATAATG 58.409 43.478 0.00 0.00 0.00 1.90
2794 2948 0.880278 TCAGCTCGCACTCAAACCAC 60.880 55.000 0.00 0.00 0.00 4.16
2820 2974 1.748244 CGTGGCCATCAGTCCATTCAT 60.748 52.381 9.72 0.00 34.47 2.57
2866 3028 1.004610 GATCAACCGCATGATGTGACG 60.005 52.381 7.69 0.00 40.08 4.35
2936 3098 8.034804 GCTGGTTAATAATTTTCTTGTCCACAT 58.965 33.333 0.00 0.00 0.00 3.21
2947 3109 8.916628 ATTGGTTGTTGCTGGTTAATAATTTT 57.083 26.923 0.00 0.00 0.00 1.82
2948 3110 8.782144 CAATTGGTTGTTGCTGGTTAATAATTT 58.218 29.630 0.00 0.00 0.00 1.82
2959 3121 5.404946 CCTATCTTCAATTGGTTGTTGCTG 58.595 41.667 5.42 0.00 36.69 4.41
2974 3136 7.015389 AGTGTACATACCCTTAAGCCTATCTTC 59.985 40.741 0.00 0.00 36.25 2.87
2975 3137 6.844917 AGTGTACATACCCTTAAGCCTATCTT 59.155 38.462 0.00 0.00 38.79 2.40
2976 3138 6.382925 AGTGTACATACCCTTAAGCCTATCT 58.617 40.000 0.00 0.00 0.00 1.98
2977 3139 6.667558 AGTGTACATACCCTTAAGCCTATC 57.332 41.667 0.00 0.00 0.00 2.08
2978 3140 7.256225 GCTAAGTGTACATACCCTTAAGCCTAT 60.256 40.741 0.00 0.00 28.37 2.57
2979 3141 6.041296 GCTAAGTGTACATACCCTTAAGCCTA 59.959 42.308 0.00 0.00 28.37 3.93
2980 3142 5.163332 GCTAAGTGTACATACCCTTAAGCCT 60.163 44.000 0.00 0.00 28.37 4.58
2981 3143 5.055144 GCTAAGTGTACATACCCTTAAGCC 58.945 45.833 0.00 0.00 28.37 4.35
2982 3144 5.667466 TGCTAAGTGTACATACCCTTAAGC 58.333 41.667 0.00 8.20 28.37 3.09
2983 3145 6.875076 ACTGCTAAGTGTACATACCCTTAAG 58.125 40.000 0.00 0.00 34.48 1.85
2984 3146 6.438108 TGACTGCTAAGTGTACATACCCTTAA 59.562 38.462 0.00 0.00 36.52 1.85
2985 3147 5.953548 TGACTGCTAAGTGTACATACCCTTA 59.046 40.000 0.00 1.16 36.52 2.69
2986 3148 4.775780 TGACTGCTAAGTGTACATACCCTT 59.224 41.667 0.00 0.00 36.52 3.95
2987 3149 4.350245 TGACTGCTAAGTGTACATACCCT 58.650 43.478 0.00 0.00 36.52 4.34
2988 3150 4.730949 TGACTGCTAAGTGTACATACCC 57.269 45.455 0.00 0.00 36.52 3.69
2989 3151 6.258068 GGAAATGACTGCTAAGTGTACATACC 59.742 42.308 0.00 0.00 36.52 2.73
2990 3152 6.019801 CGGAAATGACTGCTAAGTGTACATAC 60.020 42.308 0.00 0.00 36.52 2.39
2991 3153 6.040247 CGGAAATGACTGCTAAGTGTACATA 58.960 40.000 0.00 0.00 36.52 2.29
2992 3154 4.870426 CGGAAATGACTGCTAAGTGTACAT 59.130 41.667 0.00 0.00 36.52 2.29
2993 3155 4.242475 CGGAAATGACTGCTAAGTGTACA 58.758 43.478 0.00 0.00 36.52 2.90
2994 3156 4.243270 ACGGAAATGACTGCTAAGTGTAC 58.757 43.478 0.00 0.00 36.52 2.90
2995 3157 4.530710 ACGGAAATGACTGCTAAGTGTA 57.469 40.909 0.00 0.00 36.52 2.90
2996 3158 3.402628 ACGGAAATGACTGCTAAGTGT 57.597 42.857 0.00 0.00 36.52 3.55
2997 3159 3.617263 GGTACGGAAATGACTGCTAAGTG 59.383 47.826 0.00 0.00 36.52 3.16
2998 3160 3.259876 TGGTACGGAAATGACTGCTAAGT 59.740 43.478 0.00 0.00 40.21 2.24
2999 3161 3.617263 GTGGTACGGAAATGACTGCTAAG 59.383 47.826 0.00 0.00 0.00 2.18
3000 3162 3.007074 TGTGGTACGGAAATGACTGCTAA 59.993 43.478 0.00 0.00 0.00 3.09
3001 3163 2.563620 TGTGGTACGGAAATGACTGCTA 59.436 45.455 0.00 0.00 0.00 3.49
3002 3164 1.346395 TGTGGTACGGAAATGACTGCT 59.654 47.619 0.00 0.00 0.00 4.24
3003 3165 1.803334 TGTGGTACGGAAATGACTGC 58.197 50.000 0.00 0.00 0.00 4.40
3004 3166 3.595173 TGATGTGGTACGGAAATGACTG 58.405 45.455 0.00 0.00 0.00 3.51
3005 3167 3.513912 TCTGATGTGGTACGGAAATGACT 59.486 43.478 0.00 0.00 0.00 3.41
3006 3168 3.617263 GTCTGATGTGGTACGGAAATGAC 59.383 47.826 0.00 0.00 0.00 3.06
3007 3169 3.259625 TGTCTGATGTGGTACGGAAATGA 59.740 43.478 0.00 0.00 0.00 2.57
3008 3170 3.595173 TGTCTGATGTGGTACGGAAATG 58.405 45.455 0.00 0.00 0.00 2.32
3009 3171 3.973206 TGTCTGATGTGGTACGGAAAT 57.027 42.857 0.00 0.00 0.00 2.17
3010 3172 3.755112 TTGTCTGATGTGGTACGGAAA 57.245 42.857 0.00 0.00 0.00 3.13
3011 3173 3.755112 TTTGTCTGATGTGGTACGGAA 57.245 42.857 0.00 0.00 0.00 4.30
3012 3174 3.755112 TTTTGTCTGATGTGGTACGGA 57.245 42.857 0.00 0.00 0.00 4.69
3013 3175 3.364964 GCTTTTTGTCTGATGTGGTACGG 60.365 47.826 0.00 0.00 0.00 4.02
3014 3176 3.498397 AGCTTTTTGTCTGATGTGGTACG 59.502 43.478 0.00 0.00 0.00 3.67
3015 3177 4.515191 TCAGCTTTTTGTCTGATGTGGTAC 59.485 41.667 0.00 0.00 34.69 3.34
3016 3178 4.713553 TCAGCTTTTTGTCTGATGTGGTA 58.286 39.130 0.00 0.00 34.69 3.25
3017 3179 3.554934 TCAGCTTTTTGTCTGATGTGGT 58.445 40.909 0.00 0.00 34.69 4.16
3018 3180 3.611057 GCTCAGCTTTTTGTCTGATGTGG 60.611 47.826 0.00 0.00 38.50 4.17
3019 3181 3.252701 AGCTCAGCTTTTTGTCTGATGTG 59.747 43.478 0.00 0.00 38.50 3.21
3020 3182 3.252701 CAGCTCAGCTTTTTGTCTGATGT 59.747 43.478 0.00 0.00 36.40 3.06
3021 3183 3.366070 CCAGCTCAGCTTTTTGTCTGATG 60.366 47.826 0.00 0.00 36.40 3.07
3022 3184 2.818432 CCAGCTCAGCTTTTTGTCTGAT 59.182 45.455 0.00 0.00 36.40 2.90
3023 3185 2.158769 TCCAGCTCAGCTTTTTGTCTGA 60.159 45.455 0.00 0.00 36.40 3.27
3024 3186 2.224606 TCCAGCTCAGCTTTTTGTCTG 58.775 47.619 0.00 0.00 36.40 3.51
3025 3187 2.645838 TCCAGCTCAGCTTTTTGTCT 57.354 45.000 0.00 0.00 36.40 3.41
3026 3188 3.930634 AATCCAGCTCAGCTTTTTGTC 57.069 42.857 0.00 0.00 36.40 3.18
3027 3189 4.655963 TCTAATCCAGCTCAGCTTTTTGT 58.344 39.130 0.00 0.00 36.40 2.83
3028 3190 4.940046 TCTCTAATCCAGCTCAGCTTTTTG 59.060 41.667 0.00 0.00 36.40 2.44
3029 3191 5.171339 TCTCTAATCCAGCTCAGCTTTTT 57.829 39.130 0.00 0.00 36.40 1.94
3030 3192 4.833478 TCTCTAATCCAGCTCAGCTTTT 57.167 40.909 0.00 0.00 36.40 2.27
3031 3193 6.126940 TGTTATCTCTAATCCAGCTCAGCTTT 60.127 38.462 0.00 0.00 36.40 3.51
3032 3194 5.365025 TGTTATCTCTAATCCAGCTCAGCTT 59.635 40.000 0.00 0.00 36.40 3.74
3033 3195 4.898265 TGTTATCTCTAATCCAGCTCAGCT 59.102 41.667 0.00 0.00 40.77 4.24
3034 3196 4.987912 GTGTTATCTCTAATCCAGCTCAGC 59.012 45.833 0.00 0.00 0.00 4.26
3035 3197 5.009110 TCGTGTTATCTCTAATCCAGCTCAG 59.991 44.000 0.00 0.00 0.00 3.35
3036 3198 4.887655 TCGTGTTATCTCTAATCCAGCTCA 59.112 41.667 0.00 0.00 0.00 4.26
3037 3199 5.440234 TCGTGTTATCTCTAATCCAGCTC 57.560 43.478 0.00 0.00 0.00 4.09
3038 3200 5.854010 TTCGTGTTATCTCTAATCCAGCT 57.146 39.130 0.00 0.00 0.00 4.24
3039 3201 5.463724 CCTTTCGTGTTATCTCTAATCCAGC 59.536 44.000 0.00 0.00 0.00 4.85
3040 3202 6.806751 TCCTTTCGTGTTATCTCTAATCCAG 58.193 40.000 0.00 0.00 0.00 3.86
3041 3203 6.380274 ACTCCTTTCGTGTTATCTCTAATCCA 59.620 38.462 0.00 0.00 0.00 3.41
3042 3204 6.697892 CACTCCTTTCGTGTTATCTCTAATCC 59.302 42.308 0.00 0.00 0.00 3.01
3043 3205 7.221067 CACACTCCTTTCGTGTTATCTCTAATC 59.779 40.741 0.00 0.00 42.56 1.75
3044 3206 7.036220 CACACTCCTTTCGTGTTATCTCTAAT 58.964 38.462 0.00 0.00 42.56 1.73
3045 3207 6.015688 ACACACTCCTTTCGTGTTATCTCTAA 60.016 38.462 0.00 0.00 42.56 2.10
3046 3208 5.475909 ACACACTCCTTTCGTGTTATCTCTA 59.524 40.000 0.00 0.00 42.56 2.43
3047 3209 4.281182 ACACACTCCTTTCGTGTTATCTCT 59.719 41.667 0.00 0.00 42.56 3.10
3048 3210 4.557205 ACACACTCCTTTCGTGTTATCTC 58.443 43.478 0.00 0.00 42.56 2.75
3049 3211 4.602340 ACACACTCCTTTCGTGTTATCT 57.398 40.909 0.00 0.00 42.56 1.98
3050 3212 5.163982 GCTTACACACTCCTTTCGTGTTATC 60.164 44.000 0.00 0.00 42.56 1.75
3051 3213 4.689345 GCTTACACACTCCTTTCGTGTTAT 59.311 41.667 0.00 0.00 42.56 1.89
3052 3214 4.053295 GCTTACACACTCCTTTCGTGTTA 58.947 43.478 0.00 0.00 42.56 2.41
3053 3215 2.870411 GCTTACACACTCCTTTCGTGTT 59.130 45.455 0.00 0.00 42.56 3.32
3054 3216 2.480845 GCTTACACACTCCTTTCGTGT 58.519 47.619 0.00 0.00 45.80 4.49
3055 3217 1.798813 GGCTTACACACTCCTTTCGTG 59.201 52.381 0.00 0.00 38.32 4.35
3056 3218 1.692519 AGGCTTACACACTCCTTTCGT 59.307 47.619 0.00 0.00 0.00 3.85
3057 3219 2.069273 CAGGCTTACACACTCCTTTCG 58.931 52.381 0.00 0.00 0.00 3.46
3058 3220 2.427506 CCAGGCTTACACACTCCTTTC 58.572 52.381 0.00 0.00 0.00 2.62
3059 3221 1.545651 GCCAGGCTTACACACTCCTTT 60.546 52.381 3.29 0.00 0.00 3.11
3060 3222 0.036875 GCCAGGCTTACACACTCCTT 59.963 55.000 3.29 0.00 0.00 3.36
3061 3223 1.679898 GCCAGGCTTACACACTCCT 59.320 57.895 3.29 0.00 0.00 3.69
3062 3224 1.741770 CGCCAGGCTTACACACTCC 60.742 63.158 10.54 0.00 0.00 3.85
3063 3225 2.391389 GCGCCAGGCTTACACACTC 61.391 63.158 10.54 0.00 39.11 3.51
3064 3226 2.358737 GCGCCAGGCTTACACACT 60.359 61.111 10.54 0.00 39.11 3.55
3065 3227 3.431725 GGCGCCAGGCTTACACAC 61.432 66.667 24.80 0.00 42.94 3.82
3080 3242 1.386533 TATATCGGTAGGCGCTAGGC 58.613 55.000 7.64 0.00 44.19 3.93
3081 3243 4.650754 AAATATATCGGTAGGCGCTAGG 57.349 45.455 7.64 0.00 0.00 3.02
3102 3264 6.521151 TTGTTCTACGGTTTTGGGTAAAAA 57.479 33.333 0.00 0.00 37.51 1.94
3103 3265 6.712179 ATTGTTCTACGGTTTTGGGTAAAA 57.288 33.333 0.00 0.00 33.57 1.52
3104 3266 6.096564 ACAATTGTTCTACGGTTTTGGGTAAA 59.903 34.615 4.92 0.00 0.00 2.01
3105 3267 5.593502 ACAATTGTTCTACGGTTTTGGGTAA 59.406 36.000 4.92 0.00 0.00 2.85
3106 3268 5.131784 ACAATTGTTCTACGGTTTTGGGTA 58.868 37.500 4.92 0.00 0.00 3.69
3107 3269 3.955551 ACAATTGTTCTACGGTTTTGGGT 59.044 39.130 4.92 0.00 0.00 4.51
3108 3270 4.577834 ACAATTGTTCTACGGTTTTGGG 57.422 40.909 4.92 0.00 0.00 4.12
3144 3306 9.585099 CACTCAGGCAAGCATTTATTTTAATAA 57.415 29.630 0.00 0.00 0.00 1.40
3145 3307 8.196771 CCACTCAGGCAAGCATTTATTTTAATA 58.803 33.333 0.00 0.00 0.00 0.98
3146 3308 7.043565 CCACTCAGGCAAGCATTTATTTTAAT 58.956 34.615 0.00 0.00 0.00 1.40
3147 3309 6.397272 CCACTCAGGCAAGCATTTATTTTAA 58.603 36.000 0.00 0.00 0.00 1.52
3148 3310 5.105392 CCCACTCAGGCAAGCATTTATTTTA 60.105 40.000 0.00 0.00 35.39 1.52
3149 3311 4.322953 CCCACTCAGGCAAGCATTTATTTT 60.323 41.667 0.00 0.00 35.39 1.82
3150 3312 3.196254 CCCACTCAGGCAAGCATTTATTT 59.804 43.478 0.00 0.00 35.39 1.40
3151 3313 2.762327 CCCACTCAGGCAAGCATTTATT 59.238 45.455 0.00 0.00 35.39 1.40
3152 3314 2.381911 CCCACTCAGGCAAGCATTTAT 58.618 47.619 0.00 0.00 35.39 1.40
3153 3315 1.616725 CCCCACTCAGGCAAGCATTTA 60.617 52.381 0.00 0.00 35.39 1.40
3154 3316 0.901580 CCCCACTCAGGCAAGCATTT 60.902 55.000 0.00 0.00 35.39 2.32
3155 3317 1.304713 CCCCACTCAGGCAAGCATT 60.305 57.895 0.00 0.00 35.39 3.56
3156 3318 1.578215 ATCCCCACTCAGGCAAGCAT 61.578 55.000 0.00 0.00 35.39 3.79
3157 3319 1.792757 AATCCCCACTCAGGCAAGCA 61.793 55.000 0.00 0.00 35.39 3.91
3158 3320 1.000396 AATCCCCACTCAGGCAAGC 60.000 57.895 0.00 0.00 35.39 4.01
3159 3321 0.745845 CGAATCCCCACTCAGGCAAG 60.746 60.000 0.00 0.00 35.39 4.01
3160 3322 1.198094 TCGAATCCCCACTCAGGCAA 61.198 55.000 0.00 0.00 35.39 4.52
3161 3323 1.198094 TTCGAATCCCCACTCAGGCA 61.198 55.000 0.00 0.00 35.39 4.75
3162 3324 0.744771 GTTCGAATCCCCACTCAGGC 60.745 60.000 0.00 0.00 35.39 4.85
3163 3325 0.905357 AGTTCGAATCCCCACTCAGG 59.095 55.000 0.00 0.00 37.03 3.86
3164 3326 1.827969 AGAGTTCGAATCCCCACTCAG 59.172 52.381 13.57 0.00 38.53 3.35
3165 3327 1.938585 AGAGTTCGAATCCCCACTCA 58.061 50.000 13.57 0.00 38.53 3.41
3166 3328 2.223852 GCTAGAGTTCGAATCCCCACTC 60.224 54.545 0.00 2.51 36.66 3.51
3167 3329 1.757699 GCTAGAGTTCGAATCCCCACT 59.242 52.381 0.00 0.00 0.00 4.00
3168 3330 1.202545 GGCTAGAGTTCGAATCCCCAC 60.203 57.143 0.00 0.00 0.00 4.61
3169 3331 1.120530 GGCTAGAGTTCGAATCCCCA 58.879 55.000 0.00 0.00 0.00 4.96
3170 3332 0.032267 CGGCTAGAGTTCGAATCCCC 59.968 60.000 0.00 1.36 0.00 4.81
3171 3333 0.597898 GCGGCTAGAGTTCGAATCCC 60.598 60.000 0.00 0.00 0.00 3.85
3172 3334 0.597898 GGCGGCTAGAGTTCGAATCC 60.598 60.000 0.00 0.00 0.00 3.01
3173 3335 0.386113 AGGCGGCTAGAGTTCGAATC 59.614 55.000 11.03 0.15 0.00 2.52
3174 3336 1.337387 GTAGGCGGCTAGAGTTCGAAT 59.663 52.381 20.35 0.00 0.00 3.34
3175 3337 0.737219 GTAGGCGGCTAGAGTTCGAA 59.263 55.000 20.35 0.00 0.00 3.71
3176 3338 0.107312 AGTAGGCGGCTAGAGTTCGA 60.107 55.000 20.35 0.00 0.00 3.71
3177 3339 0.029567 CAGTAGGCGGCTAGAGTTCG 59.970 60.000 20.35 0.63 0.00 3.95
3178 3340 0.386113 CCAGTAGGCGGCTAGAGTTC 59.614 60.000 20.35 7.21 0.00 3.01
3179 3341 2.506065 CCAGTAGGCGGCTAGAGTT 58.494 57.895 20.35 2.71 0.00 3.01
3180 3342 4.261701 CCAGTAGGCGGCTAGAGT 57.738 61.111 20.35 4.21 0.00 3.24
3190 3352 1.070786 ACGTTGTGGTGCCAGTAGG 59.929 57.895 0.00 0.00 38.23 3.18
3191 3353 2.234613 CACGTTGTGGTGCCAGTAG 58.765 57.895 0.00 0.00 0.00 2.57
3192 3354 4.447544 CACGTTGTGGTGCCAGTA 57.552 55.556 0.00 0.00 0.00 2.74
3208 3370 5.538053 TGATTTTAGCTCAATTGGTCAACCA 59.462 36.000 5.42 0.00 45.94 3.67
3209 3371 5.863935 GTGATTTTAGCTCAATTGGTCAACC 59.136 40.000 5.42 0.00 0.00 3.77
3210 3372 6.681777 AGTGATTTTAGCTCAATTGGTCAAC 58.318 36.000 5.42 0.00 0.00 3.18
3211 3373 6.899393 AGTGATTTTAGCTCAATTGGTCAA 57.101 33.333 5.42 0.00 0.00 3.18
3212 3374 6.680810 CAAGTGATTTTAGCTCAATTGGTCA 58.319 36.000 5.42 0.00 42.15 4.02
3213 3375 7.147976 AACAAGTGATTTTAGCTCAATTGGTC 58.852 34.615 14.83 0.00 42.97 4.02
3217 3379 7.232534 TGGGTAACAAGTGATTTTAGCTCAATT 59.767 33.333 0.00 0.00 39.74 2.32
3218 3380 6.719370 TGGGTAACAAGTGATTTTAGCTCAAT 59.281 34.615 0.00 0.00 39.74 2.57
3219 3381 6.065374 TGGGTAACAAGTGATTTTAGCTCAA 58.935 36.000 0.00 0.00 39.74 3.02
3220 3382 5.626142 TGGGTAACAAGTGATTTTAGCTCA 58.374 37.500 0.00 0.00 39.74 4.26
3221 3383 6.759497 ATGGGTAACAAGTGATTTTAGCTC 57.241 37.500 0.00 0.00 39.74 4.09
3222 3384 7.232534 TCAAATGGGTAACAAGTGATTTTAGCT 59.767 33.333 0.00 0.00 39.74 3.32
3223 3385 7.328493 GTCAAATGGGTAACAAGTGATTTTAGC 59.672 37.037 0.00 0.00 39.74 3.09
3224 3386 7.537306 CGTCAAATGGGTAACAAGTGATTTTAG 59.463 37.037 0.00 0.00 39.74 1.85
3225 3387 7.364200 CGTCAAATGGGTAACAAGTGATTTTA 58.636 34.615 0.00 0.00 39.74 1.52
3226 3388 6.212955 CGTCAAATGGGTAACAAGTGATTTT 58.787 36.000 0.00 0.00 39.74 1.82
3227 3389 5.768317 CGTCAAATGGGTAACAAGTGATTT 58.232 37.500 0.00 0.00 39.74 2.17
3228 3390 4.320935 GCGTCAAATGGGTAACAAGTGATT 60.321 41.667 0.00 0.00 39.74 2.57
3229 3391 3.190535 GCGTCAAATGGGTAACAAGTGAT 59.809 43.478 0.00 0.00 39.74 3.06
3230 3392 2.550606 GCGTCAAATGGGTAACAAGTGA 59.449 45.455 0.00 0.00 39.74 3.41
3231 3393 2.292016 TGCGTCAAATGGGTAACAAGTG 59.708 45.455 0.00 0.00 39.74 3.16
3232 3394 2.577700 TGCGTCAAATGGGTAACAAGT 58.422 42.857 0.00 0.00 39.74 3.16
3233 3395 3.004315 AGTTGCGTCAAATGGGTAACAAG 59.996 43.478 0.00 0.00 39.74 3.16
3234 3396 2.952978 AGTTGCGTCAAATGGGTAACAA 59.047 40.909 0.00 0.00 39.74 2.83
3235 3397 2.292016 CAGTTGCGTCAAATGGGTAACA 59.708 45.455 10.71 0.00 36.07 2.41
3236 3398 2.550606 TCAGTTGCGTCAAATGGGTAAC 59.449 45.455 16.04 0.00 39.46 2.50
3237 3399 2.852449 TCAGTTGCGTCAAATGGGTAA 58.148 42.857 16.04 0.00 39.46 2.85
3238 3400 2.550606 GTTCAGTTGCGTCAAATGGGTA 59.449 45.455 16.04 4.34 39.46 3.69
3239 3401 1.336755 GTTCAGTTGCGTCAAATGGGT 59.663 47.619 16.04 0.00 39.46 4.51
3240 3402 1.336440 TGTTCAGTTGCGTCAAATGGG 59.664 47.619 16.04 0.00 39.46 4.00
3241 3403 2.772568 TGTTCAGTTGCGTCAAATGG 57.227 45.000 16.04 3.18 39.46 3.16
3242 3404 5.640218 AAAATGTTCAGTTGCGTCAAATG 57.360 34.783 11.88 11.88 40.20 2.32
3243 3405 6.586082 GGATAAAATGTTCAGTTGCGTCAAAT 59.414 34.615 0.00 0.00 0.00 2.32
3244 3406 5.918011 GGATAAAATGTTCAGTTGCGTCAAA 59.082 36.000 0.00 0.00 0.00 2.69
3245 3407 5.240623 AGGATAAAATGTTCAGTTGCGTCAA 59.759 36.000 0.00 0.00 0.00 3.18
3246 3408 4.759693 AGGATAAAATGTTCAGTTGCGTCA 59.240 37.500 0.00 0.00 0.00 4.35
3247 3409 5.296813 AGGATAAAATGTTCAGTTGCGTC 57.703 39.130 0.00 0.00 0.00 5.19
3248 3410 5.473504 AGAAGGATAAAATGTTCAGTTGCGT 59.526 36.000 0.00 0.00 0.00 5.24
3249 3411 5.942872 AGAAGGATAAAATGTTCAGTTGCG 58.057 37.500 0.00 0.00 0.00 4.85
3250 3412 9.129209 GTAAAGAAGGATAAAATGTTCAGTTGC 57.871 33.333 0.00 0.00 0.00 4.17
3255 3417 9.158233 CGGTAGTAAAGAAGGATAAAATGTTCA 57.842 33.333 0.00 0.00 0.00 3.18
3256 3418 8.121086 GCGGTAGTAAAGAAGGATAAAATGTTC 58.879 37.037 0.00 0.00 0.00 3.18
3257 3419 7.608761 TGCGGTAGTAAAGAAGGATAAAATGTT 59.391 33.333 0.00 0.00 0.00 2.71
3258 3420 7.107542 TGCGGTAGTAAAGAAGGATAAAATGT 58.892 34.615 0.00 0.00 0.00 2.71
3259 3421 7.548196 TGCGGTAGTAAAGAAGGATAAAATG 57.452 36.000 0.00 0.00 0.00 2.32
3260 3422 8.621286 CAATGCGGTAGTAAAGAAGGATAAAAT 58.379 33.333 0.00 0.00 0.00 1.82
3261 3423 7.066525 CCAATGCGGTAGTAAAGAAGGATAAAA 59.933 37.037 0.00 0.00 0.00 1.52
3262 3424 6.540914 CCAATGCGGTAGTAAAGAAGGATAAA 59.459 38.462 0.00 0.00 0.00 1.40
3263 3425 6.053005 CCAATGCGGTAGTAAAGAAGGATAA 58.947 40.000 0.00 0.00 0.00 1.75
3264 3426 5.454187 CCCAATGCGGTAGTAAAGAAGGATA 60.454 44.000 0.00 0.00 0.00 2.59
3265 3427 4.451900 CCAATGCGGTAGTAAAGAAGGAT 58.548 43.478 0.00 0.00 0.00 3.24
3266 3428 3.370103 CCCAATGCGGTAGTAAAGAAGGA 60.370 47.826 0.00 0.00 0.00 3.36
3267 3429 2.943033 CCCAATGCGGTAGTAAAGAAGG 59.057 50.000 0.00 0.00 0.00 3.46
3268 3430 3.869065 TCCCAATGCGGTAGTAAAGAAG 58.131 45.455 0.00 0.00 0.00 2.85
3269 3431 3.985019 TCCCAATGCGGTAGTAAAGAA 57.015 42.857 0.00 0.00 0.00 2.52
3270 3432 3.985019 TTCCCAATGCGGTAGTAAAGA 57.015 42.857 0.00 0.00 0.00 2.52
3271 3433 4.142469 CCTTTTCCCAATGCGGTAGTAAAG 60.142 45.833 0.00 0.00 0.00 1.85
3272 3434 3.759618 CCTTTTCCCAATGCGGTAGTAAA 59.240 43.478 0.00 0.00 0.00 2.01
3273 3435 3.349022 CCTTTTCCCAATGCGGTAGTAA 58.651 45.455 0.00 0.00 0.00 2.24
3274 3436 2.942306 GCCTTTTCCCAATGCGGTAGTA 60.942 50.000 0.00 0.00 0.00 1.82
3275 3437 1.834188 CCTTTTCCCAATGCGGTAGT 58.166 50.000 0.00 0.00 0.00 2.73
3276 3438 0.455815 GCCTTTTCCCAATGCGGTAG 59.544 55.000 0.00 0.00 0.00 3.18
3277 3439 0.251386 TGCCTTTTCCCAATGCGGTA 60.251 50.000 0.00 0.00 0.00 4.02
3278 3440 0.904394 ATGCCTTTTCCCAATGCGGT 60.904 50.000 0.00 0.00 0.00 5.68
3279 3441 0.249955 AATGCCTTTTCCCAATGCGG 59.750 50.000 0.00 0.00 0.00 5.69
3280 3442 2.957491 TAATGCCTTTTCCCAATGCG 57.043 45.000 0.00 0.00 0.00 4.73
3281 3443 6.350629 AGATATAATGCCTTTTCCCAATGC 57.649 37.500 0.00 0.00 0.00 3.56
3282 3444 9.048446 CAAAAGATATAATGCCTTTTCCCAATG 57.952 33.333 0.00 0.00 37.84 2.82
3283 3445 8.991275 TCAAAAGATATAATGCCTTTTCCCAAT 58.009 29.630 0.00 0.00 37.84 3.16
3284 3446 8.372877 TCAAAAGATATAATGCCTTTTCCCAA 57.627 30.769 0.00 0.00 37.84 4.12
3285 3447 7.969690 TCAAAAGATATAATGCCTTTTCCCA 57.030 32.000 0.00 0.00 37.84 4.37
3286 3448 9.836864 AAATCAAAAGATATAATGCCTTTTCCC 57.163 29.630 0.00 0.00 37.84 3.97
3313 3475 5.756347 AGTAACATGACGCACTAGTGAAAAA 59.244 36.000 27.08 8.98 0.00 1.94
3314 3476 5.294356 AGTAACATGACGCACTAGTGAAAA 58.706 37.500 27.08 8.61 0.00 2.29
3315 3477 4.878439 AGTAACATGACGCACTAGTGAAA 58.122 39.130 27.08 8.26 0.00 2.69
3316 3478 4.514781 AGTAACATGACGCACTAGTGAA 57.485 40.909 27.08 8.62 0.00 3.18
3317 3479 5.182570 AGTTAGTAACATGACGCACTAGTGA 59.817 40.000 27.08 5.70 0.00 3.41
3318 3480 5.399858 AGTTAGTAACATGACGCACTAGTG 58.600 41.667 18.93 18.93 0.00 2.74
3319 3481 5.640189 AGTTAGTAACATGACGCACTAGT 57.360 39.130 15.28 0.00 0.00 2.57
3320 3482 8.557864 ACTATAGTTAGTAACATGACGCACTAG 58.442 37.037 15.28 0.00 36.89 2.57
3321 3483 8.340443 CACTATAGTTAGTAACATGACGCACTA 58.660 37.037 15.28 0.94 36.50 2.74
3322 3484 7.194278 CACTATAGTTAGTAACATGACGCACT 58.806 38.462 15.28 0.00 36.50 4.40
3323 3485 6.417044 CCACTATAGTTAGTAACATGACGCAC 59.583 42.308 15.28 0.00 36.50 5.34
3324 3486 6.460537 CCCACTATAGTTAGTAACATGACGCA 60.461 42.308 15.28 0.00 36.50 5.24
3325 3487 5.919141 CCCACTATAGTTAGTAACATGACGC 59.081 44.000 15.28 0.00 36.50 5.19
3326 3488 7.228108 TCTCCCACTATAGTTAGTAACATGACG 59.772 40.741 15.28 2.56 36.50 4.35
3327 3489 8.461249 TCTCCCACTATAGTTAGTAACATGAC 57.539 38.462 15.28 0.00 36.50 3.06
3328 3490 7.724506 CCTCTCCCACTATAGTTAGTAACATGA 59.275 40.741 15.28 0.73 36.50 3.07
3329 3491 7.524038 GCCTCTCCCACTATAGTTAGTAACATG 60.524 44.444 15.28 0.00 36.50 3.21
3330 3492 6.494146 GCCTCTCCCACTATAGTTAGTAACAT 59.506 42.308 15.28 8.93 36.50 2.71
3331 3493 5.832060 GCCTCTCCCACTATAGTTAGTAACA 59.168 44.000 15.28 2.18 36.50 2.41
3332 3494 5.832060 TGCCTCTCCCACTATAGTTAGTAAC 59.168 44.000 1.56 4.78 36.50 2.50
3333 3495 6.022107 TGCCTCTCCCACTATAGTTAGTAA 57.978 41.667 1.56 0.00 36.50 2.24
3334 3496 5.658198 TGCCTCTCCCACTATAGTTAGTA 57.342 43.478 1.56 0.00 36.50 1.82
3335 3497 4.537945 TGCCTCTCCCACTATAGTTAGT 57.462 45.455 1.56 0.00 39.30 2.24
3336 3498 6.010850 TGTATGCCTCTCCCACTATAGTTAG 58.989 44.000 1.56 1.67 0.00 2.34
3337 3499 5.960704 TGTATGCCTCTCCCACTATAGTTA 58.039 41.667 1.56 0.00 0.00 2.24
3338 3500 4.816126 TGTATGCCTCTCCCACTATAGTT 58.184 43.478 1.56 0.00 0.00 2.24
3339 3501 4.471078 TGTATGCCTCTCCCACTATAGT 57.529 45.455 0.00 0.00 0.00 2.12
3340 3502 4.774726 ACATGTATGCCTCTCCCACTATAG 59.225 45.833 0.00 0.00 0.00 1.31
3341 3503 4.752063 ACATGTATGCCTCTCCCACTATA 58.248 43.478 0.00 0.00 0.00 1.31
3342 3504 3.591789 ACATGTATGCCTCTCCCACTAT 58.408 45.455 0.00 0.00 0.00 2.12
3343 3505 3.046283 ACATGTATGCCTCTCCCACTA 57.954 47.619 0.00 0.00 0.00 2.74
3344 3506 1.885049 ACATGTATGCCTCTCCCACT 58.115 50.000 0.00 0.00 0.00 4.00
3345 3507 2.717639 AACATGTATGCCTCTCCCAC 57.282 50.000 0.00 0.00 0.00 4.61
3346 3508 2.846206 AGAAACATGTATGCCTCTCCCA 59.154 45.455 0.00 0.00 0.00 4.37
3347 3509 3.567478 AGAAACATGTATGCCTCTCCC 57.433 47.619 0.00 0.00 0.00 4.30
3348 3510 6.767902 TGATTTAGAAACATGTATGCCTCTCC 59.232 38.462 0.00 0.00 0.00 3.71
3349 3511 7.792374 TGATTTAGAAACATGTATGCCTCTC 57.208 36.000 0.00 0.00 0.00 3.20
3370 3532 9.699410 TGGTGGTTAGATTTCTTGAAATATGAT 57.301 29.630 11.92 2.30 0.00 2.45
3371 3533 9.177608 CTGGTGGTTAGATTTCTTGAAATATGA 57.822 33.333 11.92 3.08 0.00 2.15
3372 3534 8.960591 ACTGGTGGTTAGATTTCTTGAAATATG 58.039 33.333 11.92 0.00 0.00 1.78
3373 3535 9.533831 AACTGGTGGTTAGATTTCTTGAAATAT 57.466 29.630 8.38 8.21 36.23 1.28
3374 3536 8.792633 CAACTGGTGGTTAGATTTCTTGAAATA 58.207 33.333 8.38 0.00 36.23 1.40
3375 3537 7.505585 TCAACTGGTGGTTAGATTTCTTGAAAT 59.494 33.333 8.16 8.16 36.23 2.17
3376 3538 6.831353 TCAACTGGTGGTTAGATTTCTTGAAA 59.169 34.615 0.00 0.00 36.23 2.69
3377 3539 6.262273 GTCAACTGGTGGTTAGATTTCTTGAA 59.738 38.462 0.00 0.00 36.23 2.69
3378 3540 5.763204 GTCAACTGGTGGTTAGATTTCTTGA 59.237 40.000 0.00 0.00 36.23 3.02
3379 3541 5.765182 AGTCAACTGGTGGTTAGATTTCTTG 59.235 40.000 0.00 0.00 36.23 3.02
3380 3542 5.765182 CAGTCAACTGGTGGTTAGATTTCTT 59.235 40.000 2.08 0.00 40.20 2.52
3381 3543 5.308825 CAGTCAACTGGTGGTTAGATTTCT 58.691 41.667 2.08 0.00 40.20 2.52
3382 3544 5.613358 CAGTCAACTGGTGGTTAGATTTC 57.387 43.478 2.08 0.00 40.20 2.17
3395 3557 1.148310 CGCTAACCACCAGTCAACTG 58.852 55.000 3.08 3.08 43.40 3.16
3396 3558 0.756903 ACGCTAACCACCAGTCAACT 59.243 50.000 0.00 0.00 0.00 3.16
3397 3559 1.145803 GACGCTAACCACCAGTCAAC 58.854 55.000 0.00 0.00 32.57 3.18
3398 3560 0.753867 TGACGCTAACCACCAGTCAA 59.246 50.000 0.00 0.00 38.66 3.18
3399 3561 0.317160 CTGACGCTAACCACCAGTCA 59.683 55.000 0.00 0.00 39.21 3.41
3400 3562 0.389948 CCTGACGCTAACCACCAGTC 60.390 60.000 0.00 0.00 0.00 3.51
3401 3563 1.671742 CCTGACGCTAACCACCAGT 59.328 57.895 0.00 0.00 0.00 4.00
3402 3564 1.741770 GCCTGACGCTAACCACCAG 60.742 63.158 0.00 0.00 0.00 4.00
3403 3565 2.345991 GCCTGACGCTAACCACCA 59.654 61.111 0.00 0.00 0.00 4.17
3404 3566 2.033194 GTGCCTGACGCTAACCACC 61.033 63.158 0.00 0.00 38.78 4.61
3405 3567 2.380410 CGTGCCTGACGCTAACCAC 61.380 63.158 0.00 0.00 42.21 4.16
3406 3568 2.048597 CGTGCCTGACGCTAACCA 60.049 61.111 0.00 0.00 42.21 3.67
3414 3576 1.078759 CAGAATCGTCCGTGCCTGAC 61.079 60.000 0.00 0.00 0.00 3.51
3415 3577 1.215382 CAGAATCGTCCGTGCCTGA 59.785 57.895 0.00 0.00 0.00 3.86
3416 3578 0.670546 AACAGAATCGTCCGTGCCTG 60.671 55.000 0.00 0.00 0.00 4.85
3417 3579 0.389948 GAACAGAATCGTCCGTGCCT 60.390 55.000 0.00 0.00 0.00 4.75
3418 3580 1.683790 CGAACAGAATCGTCCGTGCC 61.684 60.000 0.00 0.00 38.01 5.01
3419 3581 0.731514 TCGAACAGAATCGTCCGTGC 60.732 55.000 0.00 0.00 43.19 5.34
3420 3582 1.846782 GATCGAACAGAATCGTCCGTG 59.153 52.381 0.00 0.00 43.19 4.94
3421 3583 1.531264 CGATCGAACAGAATCGTCCGT 60.531 52.381 10.26 0.00 43.19 4.69
3422 3584 1.113253 CGATCGAACAGAATCGTCCG 58.887 55.000 10.26 0.00 43.19 4.79
3423 3585 2.376956 CTCGATCGAACAGAATCGTCC 58.623 52.381 19.92 0.00 43.19 4.79
3424 3586 1.776333 GCTCGATCGAACAGAATCGTC 59.224 52.381 19.92 0.00 43.19 4.20
3425 3587 1.828832 GCTCGATCGAACAGAATCGT 58.171 50.000 19.92 0.00 43.19 3.73
3426 3588 0.767108 CGCTCGATCGAACAGAATCG 59.233 55.000 19.92 5.82 44.04 3.34
3427 3589 2.106750 TCGCTCGATCGAACAGAATC 57.893 50.000 19.92 1.92 35.31 2.52
3428 3590 2.783828 ATCGCTCGATCGAACAGAAT 57.216 45.000 19.92 5.82 42.15 2.40
3429 3591 2.561733 AATCGCTCGATCGAACAGAA 57.438 45.000 19.92 3.60 42.15 3.02
3430 3592 2.561733 AAATCGCTCGATCGAACAGA 57.438 45.000 19.92 17.49 42.15 3.41
3431 3593 2.854777 AGAAAATCGCTCGATCGAACAG 59.145 45.455 19.92 12.84 42.15 3.16
3432 3594 2.876091 AGAAAATCGCTCGATCGAACA 58.124 42.857 19.92 6.02 42.15 3.18
3433 3595 3.909019 AAGAAAATCGCTCGATCGAAC 57.091 42.857 19.92 14.08 42.15 3.95
3434 3596 4.921470 AAAAGAAAATCGCTCGATCGAA 57.079 36.364 19.92 4.68 42.15 3.71
3435 3597 4.625742 AGAAAAAGAAAATCGCTCGATCGA 59.374 37.500 18.32 18.32 43.09 3.59
3436 3598 4.886971 AGAAAAAGAAAATCGCTCGATCG 58.113 39.130 9.36 9.36 33.08 3.69
3437 3599 5.259380 GGAGAAAAAGAAAATCGCTCGATC 58.741 41.667 5.17 0.00 33.08 3.69
3438 3600 4.095036 GGGAGAAAAAGAAAATCGCTCGAT 59.905 41.667 0.00 0.00 36.23 3.59
3439 3601 3.435671 GGGAGAAAAAGAAAATCGCTCGA 59.564 43.478 0.00 0.00 0.00 4.04
3440 3602 3.725010 CGGGAGAAAAAGAAAATCGCTCG 60.725 47.826 0.00 0.00 30.95 5.03
3441 3603 3.748298 CGGGAGAAAAAGAAAATCGCTC 58.252 45.455 0.00 0.00 0.00 5.03
3442 3604 2.095212 GCGGGAGAAAAAGAAAATCGCT 60.095 45.455 0.00 0.00 37.98 4.93
3443 3605 2.251040 GCGGGAGAAAAAGAAAATCGC 58.749 47.619 0.00 0.00 0.00 4.58
3444 3606 2.095919 ACGCGGGAGAAAAAGAAAATCG 60.096 45.455 12.47 0.00 0.00 3.34
3445 3607 3.489444 GACGCGGGAGAAAAAGAAAATC 58.511 45.455 12.47 0.00 0.00 2.17
3446 3608 2.095919 CGACGCGGGAGAAAAAGAAAAT 60.096 45.455 12.47 0.00 0.00 1.82
3447 3609 1.262151 CGACGCGGGAGAAAAAGAAAA 59.738 47.619 12.47 0.00 0.00 2.29
3448 3610 0.863144 CGACGCGGGAGAAAAAGAAA 59.137 50.000 12.47 0.00 0.00 2.52
3449 3611 1.562575 GCGACGCGGGAGAAAAAGAA 61.563 55.000 12.47 0.00 0.00 2.52
3450 3612 2.025418 GCGACGCGGGAGAAAAAGA 61.025 57.895 12.47 0.00 0.00 2.52
3451 3613 2.474712 GCGACGCGGGAGAAAAAG 59.525 61.111 12.47 0.00 0.00 2.27
3462 3624 3.607987 CTCGATGGAACGCGACGC 61.608 66.667 15.93 10.49 34.38 5.19
3463 3625 3.607987 GCTCGATGGAACGCGACG 61.608 66.667 15.93 8.58 34.38 5.12
3466 3628 1.752501 AAATCGCTCGATGGAACGCG 61.753 55.000 3.53 3.53 46.28 6.01
3467 3629 0.373716 AAAATCGCTCGATGGAACGC 59.626 50.000 5.47 0.00 34.70 4.84
3468 3630 1.927174 AGAAAATCGCTCGATGGAACG 59.073 47.619 5.47 0.00 34.70 3.95
3469 3631 4.342352 AAAGAAAATCGCTCGATGGAAC 57.658 40.909 5.47 0.00 34.70 3.62
3470 3632 4.142687 GGAAAAGAAAATCGCTCGATGGAA 60.143 41.667 5.47 0.00 34.70 3.53
3471 3633 3.374058 GGAAAAGAAAATCGCTCGATGGA 59.626 43.478 5.47 0.00 34.70 3.41
3472 3634 3.375299 AGGAAAAGAAAATCGCTCGATGG 59.625 43.478 5.47 0.00 34.70 3.51
3473 3635 4.494855 GGAGGAAAAGAAAATCGCTCGATG 60.495 45.833 5.47 0.00 34.70 3.84
3474 3636 3.623510 GGAGGAAAAGAAAATCGCTCGAT 59.376 43.478 0.00 0.00 36.23 3.59
3475 3637 3.000727 GGAGGAAAAGAAAATCGCTCGA 58.999 45.455 0.00 0.00 0.00 4.04
3476 3638 2.096013 GGGAGGAAAAGAAAATCGCTCG 59.904 50.000 0.00 0.00 0.00 5.03
3477 3639 2.096013 CGGGAGGAAAAGAAAATCGCTC 59.904 50.000 0.00 0.00 0.00 5.03
3478 3640 2.084546 CGGGAGGAAAAGAAAATCGCT 58.915 47.619 0.00 0.00 0.00 4.93
3479 3641 1.467543 GCGGGAGGAAAAGAAAATCGC 60.468 52.381 0.00 0.00 0.00 4.58
3480 3642 1.810151 TGCGGGAGGAAAAGAAAATCG 59.190 47.619 0.00 0.00 0.00 3.34
3481 3643 3.487544 CGATGCGGGAGGAAAAGAAAATC 60.488 47.826 0.00 0.00 0.00 2.17
3482 3644 2.423538 CGATGCGGGAGGAAAAGAAAAT 59.576 45.455 0.00 0.00 0.00 1.82
3483 3645 1.810151 CGATGCGGGAGGAAAAGAAAA 59.190 47.619 0.00 0.00 0.00 2.29
3484 3646 1.271163 ACGATGCGGGAGGAAAAGAAA 60.271 47.619 0.00 0.00 0.00 2.52
3485 3647 0.323629 ACGATGCGGGAGGAAAAGAA 59.676 50.000 0.00 0.00 0.00 2.52
3486 3648 0.323629 AACGATGCGGGAGGAAAAGA 59.676 50.000 0.00 0.00 0.00 2.52
3487 3649 0.447801 CAACGATGCGGGAGGAAAAG 59.552 55.000 0.00 0.00 0.00 2.27
3488 3650 0.035598 TCAACGATGCGGGAGGAAAA 59.964 50.000 0.00 0.00 0.00 2.29
3489 3651 1.674637 TCAACGATGCGGGAGGAAA 59.325 52.632 0.00 0.00 0.00 3.13
3490 3652 3.383229 TCAACGATGCGGGAGGAA 58.617 55.556 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.