Multiple sequence alignment - TraesCS1B01G112800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G112800 chr1B 100.000 2549 0 0 1 2549 130644673 130647221 0.000000e+00 4708
1 TraesCS1B01G112800 chr1B 96.442 1293 43 3 569 1860 307939705 307940995 0.000000e+00 2130
2 TraesCS1B01G112800 chr1B 97.254 692 17 1 1860 2549 581716018 581715327 0.000000e+00 1171
3 TraesCS1B01G112800 chr1B 96.965 692 19 1 1860 2549 154581952 154582643 0.000000e+00 1160
4 TraesCS1B01G112800 chr5B 96.687 1298 40 3 564 1860 682396001 682394706 0.000000e+00 2156
5 TraesCS1B01G112800 chr5B 96.442 1293 43 3 569 1860 81902666 81903956 0.000000e+00 2130
6 TraesCS1B01G112800 chr5B 96.000 1300 48 4 563 1860 26059383 26058086 0.000000e+00 2109
7 TraesCS1B01G112800 chr2B 96.231 1300 44 5 563 1860 692955890 692957186 0.000000e+00 2124
8 TraesCS1B01G112800 chr2B 95.649 1310 51 5 552 1860 458657408 458658712 0.000000e+00 2098
9 TraesCS1B01G112800 chr2B 97.547 693 14 2 1860 2549 384808820 384808128 0.000000e+00 1182
10 TraesCS1B01G112800 chr7B 96.293 1295 43 4 569 1860 677862790 677861498 0.000000e+00 2121
11 TraesCS1B01G112800 chr7B 95.789 1306 51 4 557 1860 720989202 720987899 0.000000e+00 2104
12 TraesCS1B01G112800 chr7B 96.970 693 17 3 1860 2549 708941715 708941024 0.000000e+00 1160
13 TraesCS1B01G112800 chr2D 96.225 1298 44 4 566 1860 64508695 64509990 0.000000e+00 2121
14 TraesCS1B01G112800 chr3B 97.829 691 13 2 1860 2549 792940928 792941617 0.000000e+00 1192
15 TraesCS1B01G112800 chr3B 97.399 692 14 4 1860 2549 673605866 673605177 0.000000e+00 1175
16 TraesCS1B01G112800 chr3B 97.114 693 16 3 1860 2549 108090771 108090080 0.000000e+00 1166
17 TraesCS1B01G112800 chr6B 97.522 686 15 1 1866 2549 527992059 527991374 0.000000e+00 1171
18 TraesCS1B01G112800 chr6B 97.110 692 17 3 1860 2549 658365883 658365193 0.000000e+00 1164
19 TraesCS1B01G112800 chr1A 84.824 369 43 10 3 361 98249044 98249409 2.410000e-95 359


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G112800 chr1B 130644673 130647221 2548 False 4708 4708 100.000 1 2549 1 chr1B.!!$F1 2548
1 TraesCS1B01G112800 chr1B 307939705 307940995 1290 False 2130 2130 96.442 569 1860 1 chr1B.!!$F3 1291
2 TraesCS1B01G112800 chr1B 581715327 581716018 691 True 1171 1171 97.254 1860 2549 1 chr1B.!!$R1 689
3 TraesCS1B01G112800 chr1B 154581952 154582643 691 False 1160 1160 96.965 1860 2549 1 chr1B.!!$F2 689
4 TraesCS1B01G112800 chr5B 682394706 682396001 1295 True 2156 2156 96.687 564 1860 1 chr5B.!!$R2 1296
5 TraesCS1B01G112800 chr5B 81902666 81903956 1290 False 2130 2130 96.442 569 1860 1 chr5B.!!$F1 1291
6 TraesCS1B01G112800 chr5B 26058086 26059383 1297 True 2109 2109 96.000 563 1860 1 chr5B.!!$R1 1297
7 TraesCS1B01G112800 chr2B 692955890 692957186 1296 False 2124 2124 96.231 563 1860 1 chr2B.!!$F2 1297
8 TraesCS1B01G112800 chr2B 458657408 458658712 1304 False 2098 2098 95.649 552 1860 1 chr2B.!!$F1 1308
9 TraesCS1B01G112800 chr2B 384808128 384808820 692 True 1182 1182 97.547 1860 2549 1 chr2B.!!$R1 689
10 TraesCS1B01G112800 chr7B 677861498 677862790 1292 True 2121 2121 96.293 569 1860 1 chr7B.!!$R1 1291
11 TraesCS1B01G112800 chr7B 720987899 720989202 1303 True 2104 2104 95.789 557 1860 1 chr7B.!!$R3 1303
12 TraesCS1B01G112800 chr7B 708941024 708941715 691 True 1160 1160 96.970 1860 2549 1 chr7B.!!$R2 689
13 TraesCS1B01G112800 chr2D 64508695 64509990 1295 False 2121 2121 96.225 566 1860 1 chr2D.!!$F1 1294
14 TraesCS1B01G112800 chr3B 792940928 792941617 689 False 1192 1192 97.829 1860 2549 1 chr3B.!!$F1 689
15 TraesCS1B01G112800 chr3B 673605177 673605866 689 True 1175 1175 97.399 1860 2549 1 chr3B.!!$R2 689
16 TraesCS1B01G112800 chr3B 108090080 108090771 691 True 1166 1166 97.114 1860 2549 1 chr3B.!!$R1 689
17 TraesCS1B01G112800 chr6B 527991374 527992059 685 True 1171 1171 97.522 1866 2549 1 chr6B.!!$R1 683
18 TraesCS1B01G112800 chr6B 658365193 658365883 690 True 1164 1164 97.110 1860 2549 1 chr6B.!!$R2 689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
115 116 0.041090 GGGGGATCTCAAAGGCCAAA 59.959 55.0 5.01 0.00 0.00 3.28 F
262 263 0.106819 AGCTCCATCAAGGTGGATGC 60.107 55.0 1.90 8.75 46.67 3.91 F
289 290 0.181350 GGTGGGTGCTGATAAGGGAG 59.819 60.0 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1148 1154 0.830648 TCTTACCCCATTCTCGCTGG 59.169 55.000 0.00 0.00 0.00 4.85 R
1227 1233 1.881324 CATGTCACCTGCATGAACACA 59.119 47.619 0.00 0.00 44.60 3.72 R
2133 2147 2.003658 AAACCACGTGGCAGTGCAAG 62.004 55.000 34.26 7.83 40.59 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.796350 ATTAACGTGTGACTTGATTAGGC 57.204 39.130 0.00 0.00 0.00 3.93
25 26 1.710013 ACGTGTGACTTGATTAGGCG 58.290 50.000 0.00 0.00 32.99 5.52
26 27 1.271379 ACGTGTGACTTGATTAGGCGA 59.729 47.619 0.00 0.00 32.99 5.54
27 28 2.094182 ACGTGTGACTTGATTAGGCGAT 60.094 45.455 0.00 0.00 32.99 4.58
28 29 2.930040 CGTGTGACTTGATTAGGCGATT 59.070 45.455 0.00 0.00 32.99 3.34
29 30 4.109766 CGTGTGACTTGATTAGGCGATTA 58.890 43.478 0.00 0.00 32.99 1.75
30 31 4.745125 CGTGTGACTTGATTAGGCGATTAT 59.255 41.667 0.00 0.00 32.99 1.28
31 32 5.107837 CGTGTGACTTGATTAGGCGATTATC 60.108 44.000 0.00 0.00 32.99 1.75
32 33 5.753438 GTGTGACTTGATTAGGCGATTATCA 59.247 40.000 0.00 0.00 32.99 2.15
33 34 6.425114 GTGTGACTTGATTAGGCGATTATCAT 59.575 38.462 0.00 0.00 32.99 2.45
34 35 6.646653 TGTGACTTGATTAGGCGATTATCATC 59.353 38.462 0.00 0.00 32.99 2.92
35 36 6.870965 GTGACTTGATTAGGCGATTATCATCT 59.129 38.462 0.00 0.00 32.99 2.90
36 37 6.870439 TGACTTGATTAGGCGATTATCATCTG 59.130 38.462 0.00 0.00 32.99 2.90
37 38 6.997655 ACTTGATTAGGCGATTATCATCTGA 58.002 36.000 0.00 0.00 0.00 3.27
38 39 7.619050 ACTTGATTAGGCGATTATCATCTGAT 58.381 34.615 0.00 0.00 38.51 2.90
39 40 8.099537 ACTTGATTAGGCGATTATCATCTGATT 58.900 33.333 0.00 0.00 36.05 2.57
40 41 8.484641 TTGATTAGGCGATTATCATCTGATTC 57.515 34.615 0.00 0.00 36.05 2.52
41 42 7.614494 TGATTAGGCGATTATCATCTGATTCA 58.386 34.615 0.00 0.00 36.05 2.57
42 43 7.547019 TGATTAGGCGATTATCATCTGATTCAC 59.453 37.037 0.00 0.00 36.05 3.18
43 44 4.240888 AGGCGATTATCATCTGATTCACG 58.759 43.478 0.00 3.78 36.05 4.35
44 45 4.021981 AGGCGATTATCATCTGATTCACGA 60.022 41.667 0.00 0.00 36.05 4.35
45 46 4.325741 GGCGATTATCATCTGATTCACGAG 59.674 45.833 0.00 0.00 36.05 4.18
46 47 4.201570 GCGATTATCATCTGATTCACGAGC 60.202 45.833 0.00 0.00 36.05 5.03
47 48 5.159925 CGATTATCATCTGATTCACGAGCT 58.840 41.667 0.00 0.00 36.05 4.09
48 49 6.317857 CGATTATCATCTGATTCACGAGCTA 58.682 40.000 0.00 0.00 36.05 3.32
49 50 6.468637 CGATTATCATCTGATTCACGAGCTAG 59.531 42.308 0.00 0.00 36.05 3.42
50 51 6.884280 TTATCATCTGATTCACGAGCTAGA 57.116 37.500 0.00 0.00 36.05 2.43
51 52 4.827304 TCATCTGATTCACGAGCTAGAG 57.173 45.455 0.00 0.00 0.00 2.43
52 53 4.455606 TCATCTGATTCACGAGCTAGAGA 58.544 43.478 0.00 0.00 0.00 3.10
53 54 5.069318 TCATCTGATTCACGAGCTAGAGAT 58.931 41.667 0.00 0.00 0.00 2.75
54 55 5.534278 TCATCTGATTCACGAGCTAGAGATT 59.466 40.000 0.00 0.00 0.00 2.40
55 56 5.180367 TCTGATTCACGAGCTAGAGATTG 57.820 43.478 0.00 0.00 0.00 2.67
56 57 4.642437 TCTGATTCACGAGCTAGAGATTGT 59.358 41.667 0.00 0.00 0.00 2.71
57 58 5.823045 TCTGATTCACGAGCTAGAGATTGTA 59.177 40.000 0.00 0.00 0.00 2.41
58 59 6.488344 TCTGATTCACGAGCTAGAGATTGTAT 59.512 38.462 0.00 0.00 0.00 2.29
59 60 6.673106 TGATTCACGAGCTAGAGATTGTATC 58.327 40.000 0.00 0.00 0.00 2.24
60 61 4.733972 TCACGAGCTAGAGATTGTATCG 57.266 45.455 0.00 0.00 35.00 2.92
61 62 3.058846 TCACGAGCTAGAGATTGTATCGC 60.059 47.826 0.00 0.00 32.22 4.58
62 63 2.879026 ACGAGCTAGAGATTGTATCGCA 59.121 45.455 0.00 0.00 32.22 5.10
63 64 3.058570 ACGAGCTAGAGATTGTATCGCAG 60.059 47.826 0.00 0.00 32.22 5.18
64 65 3.241701 GAGCTAGAGATTGTATCGCAGC 58.758 50.000 0.00 0.00 35.35 5.25
65 66 2.625314 AGCTAGAGATTGTATCGCAGCA 59.375 45.455 0.00 0.00 36.50 4.41
66 67 3.068732 AGCTAGAGATTGTATCGCAGCAA 59.931 43.478 0.00 0.00 36.50 3.91
67 68 3.428198 GCTAGAGATTGTATCGCAGCAAG 59.572 47.826 0.00 0.00 35.29 4.01
68 69 3.808466 AGAGATTGTATCGCAGCAAGA 57.192 42.857 0.00 0.00 0.00 3.02
69 70 4.333913 AGAGATTGTATCGCAGCAAGAT 57.666 40.909 0.00 0.00 0.00 2.40
70 71 4.701765 AGAGATTGTATCGCAGCAAGATT 58.298 39.130 0.00 0.00 0.00 2.40
71 72 5.847304 AGAGATTGTATCGCAGCAAGATTA 58.153 37.500 0.00 0.00 0.00 1.75
72 73 6.283694 AGAGATTGTATCGCAGCAAGATTAA 58.716 36.000 0.00 0.00 0.00 1.40
73 74 6.933521 AGAGATTGTATCGCAGCAAGATTAAT 59.066 34.615 0.00 0.00 0.00 1.40
74 75 6.895898 AGATTGTATCGCAGCAAGATTAATG 58.104 36.000 0.00 0.00 0.00 1.90
75 76 6.484643 AGATTGTATCGCAGCAAGATTAATGT 59.515 34.615 0.00 0.00 0.00 2.71
76 77 5.408204 TGTATCGCAGCAAGATTAATGTG 57.592 39.130 0.00 0.00 0.00 3.21
77 78 5.115480 TGTATCGCAGCAAGATTAATGTGA 58.885 37.500 0.00 0.00 36.69 3.58
78 79 4.542662 ATCGCAGCAAGATTAATGTGAC 57.457 40.909 0.00 0.00 35.23 3.67
79 80 3.333804 TCGCAGCAAGATTAATGTGACA 58.666 40.909 0.00 0.00 0.00 3.58
80 81 3.750652 TCGCAGCAAGATTAATGTGACAA 59.249 39.130 0.00 0.00 0.00 3.18
81 82 3.848019 CGCAGCAAGATTAATGTGACAAC 59.152 43.478 0.00 0.00 0.00 3.32
82 83 4.378770 CGCAGCAAGATTAATGTGACAACT 60.379 41.667 0.00 0.00 0.00 3.16
83 84 5.163864 CGCAGCAAGATTAATGTGACAACTA 60.164 40.000 0.00 0.00 0.00 2.24
84 85 6.024049 GCAGCAAGATTAATGTGACAACTAC 58.976 40.000 0.00 0.00 0.00 2.73
85 86 6.546395 CAGCAAGATTAATGTGACAACTACC 58.454 40.000 0.00 0.00 0.00 3.18
86 87 5.351465 AGCAAGATTAATGTGACAACTACCG 59.649 40.000 0.00 0.00 0.00 4.02
87 88 5.121768 GCAAGATTAATGTGACAACTACCGT 59.878 40.000 0.00 0.00 0.00 4.83
88 89 6.348213 GCAAGATTAATGTGACAACTACCGTT 60.348 38.462 0.00 0.00 0.00 4.44
89 90 7.148540 GCAAGATTAATGTGACAACTACCGTTA 60.149 37.037 0.00 0.00 0.00 3.18
90 91 7.823149 AGATTAATGTGACAACTACCGTTAC 57.177 36.000 0.00 0.00 0.00 2.50
91 92 7.609056 AGATTAATGTGACAACTACCGTTACT 58.391 34.615 0.00 0.00 0.00 2.24
92 93 8.742777 AGATTAATGTGACAACTACCGTTACTA 58.257 33.333 0.00 0.00 0.00 1.82
93 94 8.693542 ATTAATGTGACAACTACCGTTACTAC 57.306 34.615 0.00 0.00 0.00 2.73
95 96 3.563808 TGTGACAACTACCGTTACTACGT 59.436 43.478 0.00 0.00 46.20 3.57
96 97 3.908382 GTGACAACTACCGTTACTACGTG 59.092 47.826 0.00 0.00 46.20 4.49
97 98 3.058293 TGACAACTACCGTTACTACGTGG 60.058 47.826 0.00 0.00 46.20 4.94
98 99 2.228822 ACAACTACCGTTACTACGTGGG 59.771 50.000 3.26 0.00 46.20 4.61
99 100 1.463674 ACTACCGTTACTACGTGGGG 58.536 55.000 3.26 0.00 46.20 4.96
100 101 0.740737 CTACCGTTACTACGTGGGGG 59.259 60.000 3.26 1.53 46.20 5.40
101 102 0.329931 TACCGTTACTACGTGGGGGA 59.670 55.000 3.26 0.00 46.20 4.81
102 103 0.324645 ACCGTTACTACGTGGGGGAT 60.325 55.000 3.26 0.00 46.20 3.85
103 104 0.386838 CCGTTACTACGTGGGGGATC 59.613 60.000 3.26 0.00 46.20 3.36
104 105 1.396653 CGTTACTACGTGGGGGATCT 58.603 55.000 3.26 0.00 42.72 2.75
105 106 1.336125 CGTTACTACGTGGGGGATCTC 59.664 57.143 3.26 0.00 42.72 2.75
106 107 2.381911 GTTACTACGTGGGGGATCTCA 58.618 52.381 3.26 0.00 0.00 3.27
107 108 2.762327 GTTACTACGTGGGGGATCTCAA 59.238 50.000 3.26 0.00 0.00 3.02
108 109 1.946984 ACTACGTGGGGGATCTCAAA 58.053 50.000 3.26 0.00 0.00 2.69
109 110 1.831736 ACTACGTGGGGGATCTCAAAG 59.168 52.381 3.26 0.00 0.00 2.77
110 111 1.139058 CTACGTGGGGGATCTCAAAGG 59.861 57.143 0.00 0.00 0.00 3.11
111 112 1.452108 CGTGGGGGATCTCAAAGGC 60.452 63.158 0.00 0.00 0.00 4.35
112 113 1.076705 GTGGGGGATCTCAAAGGCC 60.077 63.158 0.00 0.00 0.00 5.19
113 114 1.543642 TGGGGGATCTCAAAGGCCA 60.544 57.895 5.01 0.00 0.00 5.36
114 115 1.145900 TGGGGGATCTCAAAGGCCAA 61.146 55.000 5.01 0.00 0.00 4.52
115 116 0.041090 GGGGGATCTCAAAGGCCAAA 59.959 55.000 5.01 0.00 0.00 3.28
116 117 1.552254 GGGGGATCTCAAAGGCCAAAA 60.552 52.381 5.01 0.00 0.00 2.44
117 118 1.827344 GGGGATCTCAAAGGCCAAAAG 59.173 52.381 5.01 0.00 0.00 2.27
118 119 2.557452 GGGGATCTCAAAGGCCAAAAGA 60.557 50.000 5.01 2.14 0.00 2.52
119 120 2.757314 GGGATCTCAAAGGCCAAAAGAG 59.243 50.000 5.01 6.85 0.00 2.85
120 121 3.562176 GGGATCTCAAAGGCCAAAAGAGA 60.562 47.826 16.24 16.24 39.41 3.10
121 122 4.276642 GGATCTCAAAGGCCAAAAGAGAT 58.723 43.478 22.19 22.19 45.78 2.75
122 123 5.440610 GGATCTCAAAGGCCAAAAGAGATA 58.559 41.667 22.10 4.81 43.84 1.98
123 124 6.067350 GGATCTCAAAGGCCAAAAGAGATAT 58.933 40.000 22.10 9.16 43.84 1.63
124 125 6.548993 GGATCTCAAAGGCCAAAAGAGATATT 59.451 38.462 22.10 8.61 43.84 1.28
125 126 7.721399 GGATCTCAAAGGCCAAAAGAGATATTA 59.279 37.037 22.10 3.69 43.84 0.98
126 127 9.294614 GATCTCAAAGGCCAAAAGAGATATTAT 57.705 33.333 22.10 8.06 43.84 1.28
127 128 9.652114 ATCTCAAAGGCCAAAAGAGATATTATT 57.348 29.630 21.25 4.88 42.49 1.40
128 129 9.479549 TCTCAAAGGCCAAAAGAGATATTATTT 57.520 29.630 5.01 0.00 30.94 1.40
153 154 6.096673 TGAAAGGTAAATTTCAAAGGCCTC 57.903 37.500 5.23 0.00 44.14 4.70
154 155 5.838521 TGAAAGGTAAATTTCAAAGGCCTCT 59.161 36.000 5.23 0.00 44.14 3.69
155 156 7.007723 TGAAAGGTAAATTTCAAAGGCCTCTA 58.992 34.615 5.23 0.00 44.14 2.43
156 157 7.176690 TGAAAGGTAAATTTCAAAGGCCTCTAG 59.823 37.037 5.23 0.00 44.14 2.43
157 158 4.950475 AGGTAAATTTCAAAGGCCTCTAGC 59.050 41.667 5.23 0.00 42.60 3.42
158 159 4.201920 GGTAAATTTCAAAGGCCTCTAGCG 60.202 45.833 5.23 0.00 45.17 4.26
159 160 3.350219 AATTTCAAAGGCCTCTAGCGA 57.650 42.857 5.23 0.00 45.17 4.93
160 161 2.094762 TTTCAAAGGCCTCTAGCGAC 57.905 50.000 5.23 0.00 45.17 5.19
161 162 0.108804 TTCAAAGGCCTCTAGCGACG 60.109 55.000 5.23 0.00 45.17 5.12
162 163 0.963856 TCAAAGGCCTCTAGCGACGA 60.964 55.000 5.23 0.00 45.17 4.20
163 164 0.526524 CAAAGGCCTCTAGCGACGAG 60.527 60.000 5.23 0.00 45.17 4.18
164 165 2.286127 AAAGGCCTCTAGCGACGAGC 62.286 60.000 5.23 0.00 45.17 5.03
175 176 3.838533 CGACGAGCAGTTTCATTCG 57.161 52.632 0.00 0.00 38.88 3.34
177 178 2.247637 CGACGAGCAGTTTCATTCGTA 58.752 47.619 0.00 0.00 45.23 3.43
178 179 2.659757 CGACGAGCAGTTTCATTCGTAA 59.340 45.455 0.00 0.00 45.23 3.18
179 180 3.479866 CGACGAGCAGTTTCATTCGTAAC 60.480 47.826 0.00 0.00 45.23 2.50
180 181 3.650139 ACGAGCAGTTTCATTCGTAACT 58.350 40.909 0.00 0.00 43.64 2.24
181 182 4.056050 ACGAGCAGTTTCATTCGTAACTT 58.944 39.130 0.00 0.00 43.64 2.66
182 183 4.510340 ACGAGCAGTTTCATTCGTAACTTT 59.490 37.500 0.00 0.00 43.64 2.66
183 184 5.007332 ACGAGCAGTTTCATTCGTAACTTTT 59.993 36.000 0.00 0.00 43.64 2.27
184 185 5.560378 CGAGCAGTTTCATTCGTAACTTTTC 59.440 40.000 0.00 0.00 31.05 2.29
185 186 6.564125 CGAGCAGTTTCATTCGTAACTTTTCT 60.564 38.462 0.00 0.00 31.05 2.52
186 187 6.430451 AGCAGTTTCATTCGTAACTTTTCTG 58.570 36.000 0.00 0.00 31.05 3.02
187 188 5.115622 GCAGTTTCATTCGTAACTTTTCTGC 59.884 40.000 0.00 0.00 37.00 4.26
188 189 6.198687 CAGTTTCATTCGTAACTTTTCTGCA 58.801 36.000 0.00 0.00 31.05 4.41
189 190 6.690957 CAGTTTCATTCGTAACTTTTCTGCAA 59.309 34.615 0.00 0.00 31.05 4.08
190 191 6.912591 AGTTTCATTCGTAACTTTTCTGCAAG 59.087 34.615 0.00 0.00 29.25 4.01
191 192 6.612247 TTCATTCGTAACTTTTCTGCAAGA 57.388 33.333 0.00 0.00 44.68 3.02
205 206 5.874895 TCTGCAAGAACTGAATGAGATTG 57.125 39.130 0.00 0.00 42.31 2.67
206 207 5.311265 TCTGCAAGAACTGAATGAGATTGT 58.689 37.500 0.00 0.00 42.31 2.71
207 208 5.410746 TCTGCAAGAACTGAATGAGATTGTC 59.589 40.000 0.00 0.00 42.31 3.18
208 209 4.152938 TGCAAGAACTGAATGAGATTGTCG 59.847 41.667 0.00 0.00 0.00 4.35
209 210 4.645956 CAAGAACTGAATGAGATTGTCGC 58.354 43.478 0.00 0.00 0.00 5.19
210 211 2.926200 AGAACTGAATGAGATTGTCGCG 59.074 45.455 0.00 0.00 0.00 5.87
211 212 1.645034 ACTGAATGAGATTGTCGCGG 58.355 50.000 6.13 0.00 0.00 6.46
212 213 0.302890 CTGAATGAGATTGTCGCGGC 59.697 55.000 2.29 2.29 0.00 6.53
213 214 1.089481 TGAATGAGATTGTCGCGGCC 61.089 55.000 8.89 0.00 0.00 6.13
214 215 1.776034 GAATGAGATTGTCGCGGCCC 61.776 60.000 8.89 0.00 0.00 5.80
215 216 3.757248 ATGAGATTGTCGCGGCCCC 62.757 63.158 8.89 0.00 0.00 5.80
229 230 2.755064 CCCCGGTGCATGCATCAA 60.755 61.111 29.40 0.85 0.00 2.57
230 231 2.777972 CCCCGGTGCATGCATCAAG 61.778 63.158 29.40 19.59 0.00 3.02
231 232 1.750018 CCCGGTGCATGCATCAAGA 60.750 57.895 29.40 0.00 0.00 3.02
232 233 1.314534 CCCGGTGCATGCATCAAGAA 61.315 55.000 29.40 0.00 0.00 2.52
233 234 0.527113 CCGGTGCATGCATCAAGAAA 59.473 50.000 29.40 0.00 0.00 2.52
234 235 1.135527 CCGGTGCATGCATCAAGAAAT 59.864 47.619 29.40 0.00 0.00 2.17
235 236 2.358582 CCGGTGCATGCATCAAGAAATA 59.641 45.455 29.40 0.00 0.00 1.40
236 237 3.549423 CCGGTGCATGCATCAAGAAATAG 60.549 47.826 29.40 11.08 0.00 1.73
237 238 3.065786 CGGTGCATGCATCAAGAAATAGT 59.934 43.478 29.40 0.00 0.00 2.12
238 239 4.357142 GGTGCATGCATCAAGAAATAGTG 58.643 43.478 26.02 0.00 0.00 2.74
239 240 4.142315 GGTGCATGCATCAAGAAATAGTGT 60.142 41.667 26.02 0.00 0.00 3.55
240 241 5.066375 GGTGCATGCATCAAGAAATAGTGTA 59.934 40.000 26.02 0.00 0.00 2.90
241 242 6.238842 GGTGCATGCATCAAGAAATAGTGTAT 60.239 38.462 26.02 0.00 0.00 2.29
242 243 6.854892 GTGCATGCATCAAGAAATAGTGTATC 59.145 38.462 25.64 0.00 0.00 2.24
243 244 6.543100 TGCATGCATCAAGAAATAGTGTATCA 59.457 34.615 18.46 0.00 0.00 2.15
244 245 7.076362 GCATGCATCAAGAAATAGTGTATCAG 58.924 38.462 14.21 0.00 0.00 2.90
245 246 6.609237 TGCATCAAGAAATAGTGTATCAGC 57.391 37.500 0.00 0.00 0.00 4.26
246 247 6.351711 TGCATCAAGAAATAGTGTATCAGCT 58.648 36.000 0.00 0.00 0.00 4.24
247 248 6.481313 TGCATCAAGAAATAGTGTATCAGCTC 59.519 38.462 0.00 0.00 0.00 4.09
248 249 6.073331 GCATCAAGAAATAGTGTATCAGCTCC 60.073 42.308 0.00 0.00 0.00 4.70
249 250 6.544928 TCAAGAAATAGTGTATCAGCTCCA 57.455 37.500 0.00 0.00 0.00 3.86
250 251 7.129457 TCAAGAAATAGTGTATCAGCTCCAT 57.871 36.000 0.00 0.00 0.00 3.41
251 252 7.212976 TCAAGAAATAGTGTATCAGCTCCATC 58.787 38.462 0.00 0.00 0.00 3.51
252 253 6.737720 AGAAATAGTGTATCAGCTCCATCA 57.262 37.500 0.00 0.00 0.00 3.07
253 254 7.129457 AGAAATAGTGTATCAGCTCCATCAA 57.871 36.000 0.00 0.00 0.00 2.57
254 255 7.215789 AGAAATAGTGTATCAGCTCCATCAAG 58.784 38.462 0.00 0.00 0.00 3.02
255 256 3.834489 AGTGTATCAGCTCCATCAAGG 57.166 47.619 0.00 0.00 39.47 3.61
256 257 3.110705 AGTGTATCAGCTCCATCAAGGT 58.889 45.455 0.00 0.00 39.02 3.50
257 258 3.118482 AGTGTATCAGCTCCATCAAGGTG 60.118 47.826 0.00 0.00 44.29 4.00
258 259 2.171237 TGTATCAGCTCCATCAAGGTGG 59.829 50.000 3.56 0.00 43.37 4.61
259 260 1.588239 ATCAGCTCCATCAAGGTGGA 58.412 50.000 1.51 1.51 45.78 4.02
260 261 1.588239 TCAGCTCCATCAAGGTGGAT 58.412 50.000 1.90 0.00 46.67 3.41
261 262 1.211212 TCAGCTCCATCAAGGTGGATG 59.789 52.381 1.90 0.00 46.67 3.51
262 263 0.106819 AGCTCCATCAAGGTGGATGC 60.107 55.000 1.90 8.75 46.67 3.91
263 264 1.105759 GCTCCATCAAGGTGGATGCC 61.106 60.000 1.90 0.00 46.67 4.40
264 265 0.549950 CTCCATCAAGGTGGATGCCT 59.450 55.000 1.90 0.00 46.67 4.75
265 266 1.770658 CTCCATCAAGGTGGATGCCTA 59.229 52.381 1.90 0.00 46.67 3.93
266 267 2.374504 CTCCATCAAGGTGGATGCCTAT 59.625 50.000 1.90 0.00 46.67 2.57
267 268 2.107031 TCCATCAAGGTGGATGCCTATG 59.893 50.000 0.00 0.00 43.20 2.23
268 269 1.884579 CATCAAGGTGGATGCCTATGC 59.115 52.381 0.00 0.00 38.35 3.14
269 270 0.183492 TCAAGGTGGATGCCTATGCC 59.817 55.000 0.00 0.00 38.03 4.40
270 271 1.149174 AAGGTGGATGCCTATGCCG 59.851 57.895 0.00 0.00 38.03 5.69
271 272 2.281761 GGTGGATGCCTATGCCGG 60.282 66.667 0.00 0.00 36.33 6.13
272 273 2.510906 GTGGATGCCTATGCCGGT 59.489 61.111 1.90 0.00 36.33 5.28
273 274 1.893808 GTGGATGCCTATGCCGGTG 60.894 63.158 1.90 0.00 36.33 4.94
274 275 2.281761 GGATGCCTATGCCGGTGG 60.282 66.667 1.90 1.65 36.33 4.61
275 276 2.281761 GATGCCTATGCCGGTGGG 60.282 66.667 1.90 0.00 36.33 4.61
276 277 3.096495 ATGCCTATGCCGGTGGGT 61.096 61.111 1.90 0.00 36.33 4.51
277 278 3.420206 ATGCCTATGCCGGTGGGTG 62.420 63.158 1.90 0.00 36.33 4.61
279 280 3.797353 CCTATGCCGGTGGGTGCT 61.797 66.667 1.90 0.00 34.97 4.40
280 281 2.514592 CTATGCCGGTGGGTGCTG 60.515 66.667 1.90 0.00 34.97 4.41
281 282 3.006133 TATGCCGGTGGGTGCTGA 61.006 61.111 1.90 0.00 34.97 4.26
282 283 2.329539 CTATGCCGGTGGGTGCTGAT 62.330 60.000 1.90 0.00 34.97 2.90
283 284 1.051556 TATGCCGGTGGGTGCTGATA 61.052 55.000 1.90 0.00 34.97 2.15
284 285 1.920734 ATGCCGGTGGGTGCTGATAA 61.921 55.000 1.90 0.00 34.97 1.75
285 286 1.819632 GCCGGTGGGTGCTGATAAG 60.820 63.158 1.90 0.00 34.97 1.73
286 287 1.153168 CCGGTGGGTGCTGATAAGG 60.153 63.158 0.00 0.00 0.00 2.69
287 288 1.153168 CGGTGGGTGCTGATAAGGG 60.153 63.158 0.00 0.00 0.00 3.95
288 289 1.622607 CGGTGGGTGCTGATAAGGGA 61.623 60.000 0.00 0.00 0.00 4.20
289 290 0.181350 GGTGGGTGCTGATAAGGGAG 59.819 60.000 0.00 0.00 0.00 4.30
290 291 1.204146 GTGGGTGCTGATAAGGGAGA 58.796 55.000 0.00 0.00 0.00 3.71
291 292 1.134371 GTGGGTGCTGATAAGGGAGAC 60.134 57.143 0.00 0.00 0.00 3.36
292 293 1.204146 GGGTGCTGATAAGGGAGACA 58.796 55.000 0.00 0.00 0.00 3.41
293 294 1.771255 GGGTGCTGATAAGGGAGACAT 59.229 52.381 0.00 0.00 0.00 3.06
294 295 2.173569 GGGTGCTGATAAGGGAGACATT 59.826 50.000 0.00 0.00 38.33 2.71
295 296 3.209410 GGTGCTGATAAGGGAGACATTG 58.791 50.000 0.00 0.00 35.09 2.82
296 297 3.118261 GGTGCTGATAAGGGAGACATTGA 60.118 47.826 0.00 0.00 35.09 2.57
297 298 4.445448 GGTGCTGATAAGGGAGACATTGAT 60.445 45.833 0.00 0.00 35.09 2.57
298 299 4.514441 GTGCTGATAAGGGAGACATTGATG 59.486 45.833 0.00 0.00 35.09 3.07
299 300 4.070716 GCTGATAAGGGAGACATTGATGG 58.929 47.826 0.00 0.00 35.09 3.51
300 301 4.649692 CTGATAAGGGAGACATTGATGGG 58.350 47.826 0.00 0.00 35.09 4.00
301 302 4.047166 TGATAAGGGAGACATTGATGGGT 58.953 43.478 0.00 0.00 35.09 4.51
302 303 4.478317 TGATAAGGGAGACATTGATGGGTT 59.522 41.667 0.00 0.00 35.09 4.11
303 304 3.833559 AAGGGAGACATTGATGGGTTT 57.166 42.857 0.00 0.00 29.94 3.27
304 305 3.091633 AGGGAGACATTGATGGGTTTG 57.908 47.619 0.00 0.00 0.00 2.93
305 306 2.379907 AGGGAGACATTGATGGGTTTGT 59.620 45.455 0.00 0.00 0.00 2.83
306 307 2.493278 GGGAGACATTGATGGGTTTGTG 59.507 50.000 0.00 0.00 0.00 3.33
307 308 3.157087 GGAGACATTGATGGGTTTGTGT 58.843 45.455 0.00 0.00 0.00 3.72
308 309 3.191371 GGAGACATTGATGGGTTTGTGTC 59.809 47.826 0.00 0.00 36.98 3.67
309 310 4.074970 GAGACATTGATGGGTTTGTGTCT 58.925 43.478 5.60 5.60 46.26 3.41
310 311 5.241403 AGACATTGATGGGTTTGTGTCTA 57.759 39.130 4.19 0.00 43.02 2.59
311 312 5.630121 AGACATTGATGGGTTTGTGTCTAA 58.370 37.500 4.19 0.00 43.02 2.10
312 313 6.248433 AGACATTGATGGGTTTGTGTCTAAT 58.752 36.000 4.19 0.00 43.02 1.73
313 314 6.151648 AGACATTGATGGGTTTGTGTCTAATG 59.848 38.462 4.19 0.00 43.02 1.90
314 315 4.782019 TTGATGGGTTTGTGTCTAATGC 57.218 40.909 0.00 0.00 0.00 3.56
315 316 3.760738 TGATGGGTTTGTGTCTAATGCA 58.239 40.909 0.00 0.00 0.00 3.96
316 317 4.343231 TGATGGGTTTGTGTCTAATGCAT 58.657 39.130 0.00 0.00 0.00 3.96
317 318 4.158209 TGATGGGTTTGTGTCTAATGCATG 59.842 41.667 0.00 0.00 0.00 4.06
318 319 3.495331 TGGGTTTGTGTCTAATGCATGT 58.505 40.909 0.00 0.00 0.00 3.21
319 320 4.657013 TGGGTTTGTGTCTAATGCATGTA 58.343 39.130 0.00 0.00 0.00 2.29
320 321 4.699735 TGGGTTTGTGTCTAATGCATGTAG 59.300 41.667 0.00 4.83 0.00 2.74
321 322 4.438744 GGGTTTGTGTCTAATGCATGTAGC 60.439 45.833 0.00 2.54 45.96 3.58
338 339 3.516578 GCAAAGAGGTGCTCGTAGT 57.483 52.632 0.00 0.00 41.51 2.73
339 340 1.071605 GCAAAGAGGTGCTCGTAGTG 58.928 55.000 0.00 0.00 41.51 2.74
340 341 1.336887 GCAAAGAGGTGCTCGTAGTGA 60.337 52.381 0.00 0.00 41.51 3.41
341 342 2.329379 CAAAGAGGTGCTCGTAGTGAC 58.671 52.381 0.00 0.00 35.36 3.67
342 343 0.889306 AAGAGGTGCTCGTAGTGACC 59.111 55.000 0.00 0.00 35.36 4.02
343 344 0.251209 AGAGGTGCTCGTAGTGACCA 60.251 55.000 0.00 0.00 35.36 4.02
344 345 0.818296 GAGGTGCTCGTAGTGACCAT 59.182 55.000 0.00 0.00 0.00 3.55
345 346 1.204941 GAGGTGCTCGTAGTGACCATT 59.795 52.381 0.00 0.00 0.00 3.16
346 347 1.623811 AGGTGCTCGTAGTGACCATTT 59.376 47.619 0.00 0.00 0.00 2.32
347 348 2.000447 GGTGCTCGTAGTGACCATTTC 59.000 52.381 0.00 0.00 0.00 2.17
348 349 2.353803 GGTGCTCGTAGTGACCATTTCT 60.354 50.000 0.00 0.00 0.00 2.52
349 350 3.326747 GTGCTCGTAGTGACCATTTCTT 58.673 45.455 0.00 0.00 0.00 2.52
350 351 4.491676 GTGCTCGTAGTGACCATTTCTTA 58.508 43.478 0.00 0.00 0.00 2.10
351 352 4.563184 GTGCTCGTAGTGACCATTTCTTAG 59.437 45.833 0.00 0.00 0.00 2.18
352 353 4.113354 GCTCGTAGTGACCATTTCTTAGG 58.887 47.826 0.00 0.00 0.00 2.69
353 354 4.113354 CTCGTAGTGACCATTTCTTAGGC 58.887 47.826 0.00 0.00 0.00 3.93
354 355 3.512329 TCGTAGTGACCATTTCTTAGGCA 59.488 43.478 0.00 0.00 0.00 4.75
355 356 3.865745 CGTAGTGACCATTTCTTAGGCAG 59.134 47.826 0.00 0.00 0.00 4.85
356 357 3.356529 AGTGACCATTTCTTAGGCAGG 57.643 47.619 0.00 0.00 0.00 4.85
357 358 2.912956 AGTGACCATTTCTTAGGCAGGA 59.087 45.455 0.00 0.00 0.00 3.86
358 359 3.054802 AGTGACCATTTCTTAGGCAGGAG 60.055 47.826 0.00 0.00 0.00 3.69
359 360 3.055094 GTGACCATTTCTTAGGCAGGAGA 60.055 47.826 0.00 0.00 0.00 3.71
360 361 3.782523 TGACCATTTCTTAGGCAGGAGAT 59.217 43.478 0.00 0.00 0.00 2.75
361 362 4.133078 GACCATTTCTTAGGCAGGAGATG 58.867 47.826 0.00 0.00 0.00 2.90
394 395 8.958175 AAAAATTACATTTTAACGATCTCGCA 57.042 26.923 0.00 0.00 41.30 5.10
395 396 8.601243 AAAATTACATTTTAACGATCTCGCAG 57.399 30.769 0.00 0.00 40.71 5.18
396 397 5.712217 TTACATTTTAACGATCTCGCAGG 57.288 39.130 0.00 0.00 44.43 4.85
397 398 2.351726 ACATTTTAACGATCTCGCAGGC 59.648 45.455 0.00 0.00 44.43 4.85
398 399 2.087501 TTTTAACGATCTCGCAGGCA 57.912 45.000 0.00 0.00 44.43 4.75
399 400 2.309528 TTTAACGATCTCGCAGGCAT 57.690 45.000 0.00 0.00 44.43 4.40
400 401 1.852942 TTAACGATCTCGCAGGCATC 58.147 50.000 0.00 0.00 44.43 3.91
401 402 1.032794 TAACGATCTCGCAGGCATCT 58.967 50.000 0.00 0.00 44.43 2.90
402 403 0.249238 AACGATCTCGCAGGCATCTC 60.249 55.000 0.00 0.00 44.43 2.75
403 404 1.728778 CGATCTCGCAGGCATCTCG 60.729 63.158 0.00 0.00 0.00 4.04
404 405 1.656998 GATCTCGCAGGCATCTCGA 59.343 57.895 0.00 0.00 0.00 4.04
407 408 3.603365 TCGCAGGCATCTCGAGAA 58.397 55.556 20.91 2.87 0.00 2.87
408 409 2.119009 TCGCAGGCATCTCGAGAAT 58.881 52.632 20.91 5.37 0.00 2.40
409 410 0.249197 TCGCAGGCATCTCGAGAATG 60.249 55.000 20.91 17.87 0.00 2.67
410 411 0.249197 CGCAGGCATCTCGAGAATGA 60.249 55.000 20.91 0.00 0.00 2.57
411 412 1.500108 GCAGGCATCTCGAGAATGAG 58.500 55.000 20.91 10.85 37.33 2.90
412 413 1.202510 GCAGGCATCTCGAGAATGAGT 60.203 52.381 20.91 0.00 37.28 3.41
413 414 2.741228 GCAGGCATCTCGAGAATGAGTT 60.741 50.000 20.91 0.00 37.28 3.01
414 415 2.864946 CAGGCATCTCGAGAATGAGTTG 59.135 50.000 20.91 13.00 38.27 3.16
415 416 2.158986 AGGCATCTCGAGAATGAGTTGG 60.159 50.000 20.91 3.15 36.59 3.77
416 417 2.419297 GGCATCTCGAGAATGAGTTGGT 60.419 50.000 20.91 0.00 36.59 3.67
417 418 2.863137 GCATCTCGAGAATGAGTTGGTC 59.137 50.000 20.91 0.00 36.59 4.02
418 419 3.430098 GCATCTCGAGAATGAGTTGGTCT 60.430 47.826 20.91 0.00 36.59 3.85
419 420 4.358851 CATCTCGAGAATGAGTTGGTCTC 58.641 47.826 20.91 0.00 43.03 3.36
424 425 4.912528 GAGAATGAGTTGGTCTCGAAAC 57.087 45.455 0.00 0.00 45.46 2.78
425 426 4.307432 GAGAATGAGTTGGTCTCGAAACA 58.693 43.478 0.00 0.00 45.46 2.83
426 427 4.899502 AGAATGAGTTGGTCTCGAAACAT 58.100 39.130 0.00 0.00 45.46 2.71
427 428 5.308825 AGAATGAGTTGGTCTCGAAACATT 58.691 37.500 0.00 0.00 45.46 2.71
428 429 5.180117 AGAATGAGTTGGTCTCGAAACATTG 59.820 40.000 0.00 0.00 45.46 2.82
429 430 4.066646 TGAGTTGGTCTCGAAACATTGA 57.933 40.909 0.00 0.00 45.46 2.57
430 431 4.641396 TGAGTTGGTCTCGAAACATTGAT 58.359 39.130 0.00 0.00 45.46 2.57
431 432 4.452114 TGAGTTGGTCTCGAAACATTGATG 59.548 41.667 0.00 0.00 45.46 3.07
432 433 4.641396 AGTTGGTCTCGAAACATTGATGA 58.359 39.130 0.00 0.00 0.00 2.92
433 434 4.692625 AGTTGGTCTCGAAACATTGATGAG 59.307 41.667 0.00 0.00 0.00 2.90
434 435 4.271696 TGGTCTCGAAACATTGATGAGT 57.728 40.909 0.00 0.00 0.00 3.41
435 436 4.641396 TGGTCTCGAAACATTGATGAGTT 58.359 39.130 0.00 0.00 0.00 3.01
436 437 4.452114 TGGTCTCGAAACATTGATGAGTTG 59.548 41.667 0.00 0.00 0.00 3.16
437 438 4.142816 GGTCTCGAAACATTGATGAGTTGG 60.143 45.833 0.00 0.00 0.00 3.77
438 439 4.452455 GTCTCGAAACATTGATGAGTTGGT 59.548 41.667 0.00 0.00 0.00 3.67
439 440 4.690748 TCTCGAAACATTGATGAGTTGGTC 59.309 41.667 0.00 0.00 0.00 4.02
440 441 4.641396 TCGAAACATTGATGAGTTGGTCT 58.359 39.130 0.00 0.00 0.00 3.85
441 442 4.690748 TCGAAACATTGATGAGTTGGTCTC 59.309 41.667 0.00 0.00 43.03 3.36
442 443 4.434725 CGAAACATTGATGAGTTGGTCTCG 60.435 45.833 0.00 0.00 45.46 4.04
443 444 3.961480 ACATTGATGAGTTGGTCTCGA 57.039 42.857 0.00 0.00 45.46 4.04
444 445 4.271696 ACATTGATGAGTTGGTCTCGAA 57.728 40.909 0.00 0.00 45.46 3.71
445 446 4.641396 ACATTGATGAGTTGGTCTCGAAA 58.359 39.130 0.00 0.00 45.46 3.46
446 447 5.248640 ACATTGATGAGTTGGTCTCGAAAT 58.751 37.500 0.00 0.00 45.46 2.17
447 448 5.122869 ACATTGATGAGTTGGTCTCGAAATG 59.877 40.000 0.00 11.59 45.46 2.32
448 449 3.599343 TGATGAGTTGGTCTCGAAATGG 58.401 45.455 0.00 0.00 45.46 3.16
449 450 3.007940 TGATGAGTTGGTCTCGAAATGGT 59.992 43.478 0.00 0.00 45.46 3.55
450 451 3.040147 TGAGTTGGTCTCGAAATGGTC 57.960 47.619 0.00 0.00 45.46 4.02
451 452 2.367241 TGAGTTGGTCTCGAAATGGTCA 59.633 45.455 0.00 0.00 45.46 4.02
452 453 3.181459 TGAGTTGGTCTCGAAATGGTCAA 60.181 43.478 0.00 0.00 45.46 3.18
453 454 3.139077 AGTTGGTCTCGAAATGGTCAAC 58.861 45.455 0.00 0.00 34.87 3.18
454 455 1.790755 TGGTCTCGAAATGGTCAACG 58.209 50.000 0.00 0.00 0.00 4.10
455 456 1.341852 TGGTCTCGAAATGGTCAACGA 59.658 47.619 0.00 0.00 0.00 3.85
456 457 1.725164 GGTCTCGAAATGGTCAACGAC 59.275 52.381 0.00 0.00 0.00 4.34
457 458 2.400399 GTCTCGAAATGGTCAACGACA 58.600 47.619 0.00 0.00 33.68 4.35
458 459 2.798283 GTCTCGAAATGGTCAACGACAA 59.202 45.455 0.00 0.00 33.68 3.18
459 460 3.057019 TCTCGAAATGGTCAACGACAAG 58.943 45.455 0.00 0.00 33.68 3.16
460 461 3.057019 CTCGAAATGGTCAACGACAAGA 58.943 45.455 0.00 0.00 33.68 3.02
461 462 3.459145 TCGAAATGGTCAACGACAAGAA 58.541 40.909 0.00 0.00 33.68 2.52
462 463 4.062293 TCGAAATGGTCAACGACAAGAAT 58.938 39.130 0.00 0.00 33.68 2.40
463 464 4.084066 TCGAAATGGTCAACGACAAGAATG 60.084 41.667 0.00 0.00 33.68 2.67
464 465 4.084066 CGAAATGGTCAACGACAAGAATGA 60.084 41.667 0.00 0.00 33.68 2.57
465 466 5.362556 AAATGGTCAACGACAAGAATGAG 57.637 39.130 0.00 0.00 33.68 2.90
466 467 2.766313 TGGTCAACGACAAGAATGAGG 58.234 47.619 0.00 0.00 33.68 3.86
467 468 2.367241 TGGTCAACGACAAGAATGAGGA 59.633 45.455 0.00 0.00 33.68 3.71
468 469 2.996621 GGTCAACGACAAGAATGAGGAG 59.003 50.000 0.00 0.00 33.68 3.69
469 470 2.413453 GTCAACGACAAGAATGAGGAGC 59.587 50.000 0.00 0.00 32.09 4.70
470 471 1.734465 CAACGACAAGAATGAGGAGCC 59.266 52.381 0.00 0.00 0.00 4.70
471 472 0.976641 ACGACAAGAATGAGGAGCCA 59.023 50.000 0.00 0.00 0.00 4.75
472 473 1.556911 ACGACAAGAATGAGGAGCCAT 59.443 47.619 0.00 0.00 0.00 4.40
473 474 2.208431 CGACAAGAATGAGGAGCCATC 58.792 52.381 0.00 0.00 0.00 3.51
474 475 2.419159 CGACAAGAATGAGGAGCCATCA 60.419 50.000 0.00 0.00 0.00 3.07
475 476 3.614092 GACAAGAATGAGGAGCCATCAA 58.386 45.455 0.00 0.00 0.00 2.57
476 477 3.350833 ACAAGAATGAGGAGCCATCAAC 58.649 45.455 0.00 0.00 0.00 3.18
477 478 3.009916 ACAAGAATGAGGAGCCATCAACT 59.990 43.478 0.00 0.00 0.00 3.16
478 479 4.225942 ACAAGAATGAGGAGCCATCAACTA 59.774 41.667 0.00 0.00 0.00 2.24
479 480 4.414337 AGAATGAGGAGCCATCAACTAC 57.586 45.455 0.00 0.00 0.00 2.73
480 481 2.898729 ATGAGGAGCCATCAACTACG 57.101 50.000 0.00 0.00 0.00 3.51
481 482 1.847328 TGAGGAGCCATCAACTACGA 58.153 50.000 0.00 0.00 0.00 3.43
482 483 2.176045 TGAGGAGCCATCAACTACGAA 58.824 47.619 0.00 0.00 0.00 3.85
483 484 2.166459 TGAGGAGCCATCAACTACGAAG 59.834 50.000 0.00 0.00 0.00 3.79
484 485 1.482593 AGGAGCCATCAACTACGAAGG 59.517 52.381 0.00 0.00 0.00 3.46
485 486 1.473434 GGAGCCATCAACTACGAAGGG 60.473 57.143 0.00 0.00 0.00 3.95
486 487 1.480954 GAGCCATCAACTACGAAGGGA 59.519 52.381 0.00 0.00 0.00 4.20
487 488 2.103263 GAGCCATCAACTACGAAGGGAT 59.897 50.000 0.00 0.00 0.00 3.85
488 489 2.158900 AGCCATCAACTACGAAGGGATG 60.159 50.000 0.00 0.00 37.91 3.51
489 490 2.213499 CCATCAACTACGAAGGGATGC 58.787 52.381 0.00 0.00 37.34 3.91
490 491 2.419990 CCATCAACTACGAAGGGATGCA 60.420 50.000 0.00 0.00 37.34 3.96
491 492 3.470709 CATCAACTACGAAGGGATGCAT 58.529 45.455 0.00 0.00 34.19 3.96
492 493 2.905075 TCAACTACGAAGGGATGCATG 58.095 47.619 2.46 0.00 0.00 4.06
493 494 2.236146 TCAACTACGAAGGGATGCATGT 59.764 45.455 2.46 0.00 0.00 3.21
494 495 3.009723 CAACTACGAAGGGATGCATGTT 58.990 45.455 2.46 0.00 0.00 2.71
495 496 3.350219 ACTACGAAGGGATGCATGTTT 57.650 42.857 2.46 0.00 0.00 2.83
496 497 3.686016 ACTACGAAGGGATGCATGTTTT 58.314 40.909 2.46 0.00 0.00 2.43
497 498 3.440173 ACTACGAAGGGATGCATGTTTTG 59.560 43.478 2.46 2.05 0.00 2.44
498 499 2.513753 ACGAAGGGATGCATGTTTTGA 58.486 42.857 2.46 0.00 0.00 2.69
499 500 2.890311 ACGAAGGGATGCATGTTTTGAA 59.110 40.909 2.46 0.00 0.00 2.69
500 501 3.320541 ACGAAGGGATGCATGTTTTGAAA 59.679 39.130 2.46 0.00 0.00 2.69
501 502 4.202202 ACGAAGGGATGCATGTTTTGAAAA 60.202 37.500 2.46 0.00 0.00 2.29
502 503 4.150451 CGAAGGGATGCATGTTTTGAAAAC 59.850 41.667 13.55 13.55 0.00 2.43
503 504 4.686191 AGGGATGCATGTTTTGAAAACA 57.314 36.364 23.72 23.72 34.31 2.83
504 505 5.033589 AGGGATGCATGTTTTGAAAACAA 57.966 34.783 25.01 11.28 33.42 2.83
505 506 5.435291 AGGGATGCATGTTTTGAAAACAAA 58.565 33.333 25.01 14.99 33.42 2.83
506 507 6.063404 AGGGATGCATGTTTTGAAAACAAAT 58.937 32.000 25.01 18.40 33.42 2.32
507 508 6.016943 AGGGATGCATGTTTTGAAAACAAATG 60.017 34.615 25.01 20.10 33.42 2.32
508 509 6.017275 GGGATGCATGTTTTGAAAACAAATGA 60.017 34.615 25.01 11.40 33.42 2.57
509 510 6.852345 GGATGCATGTTTTGAAAACAAATGAC 59.148 34.615 25.01 16.22 33.42 3.06
510 511 5.793675 TGCATGTTTTGAAAACAAATGACG 58.206 33.333 25.01 11.73 33.42 4.35
511 512 5.578336 TGCATGTTTTGAAAACAAATGACGA 59.422 32.000 25.01 7.17 33.42 4.20
512 513 5.895889 GCATGTTTTGAAAACAAATGACGAC 59.104 36.000 25.01 5.95 33.42 4.34
513 514 6.454848 GCATGTTTTGAAAACAAATGACGACA 60.455 34.615 25.01 4.64 33.42 4.35
514 515 7.451429 CATGTTTTGAAAACAAATGACGACAA 58.549 30.769 25.01 0.00 33.42 3.18
515 516 7.588143 TGTTTTGAAAACAAATGACGACAAT 57.412 28.000 20.01 0.00 0.00 2.71
516 517 7.451429 TGTTTTGAAAACAAATGACGACAATG 58.549 30.769 20.01 0.00 0.00 2.82
517 518 7.329471 TGTTTTGAAAACAAATGACGACAATGA 59.671 29.630 20.01 0.00 0.00 2.57
518 519 7.818493 TTTGAAAACAAATGACGACAATGAA 57.182 28.000 10.09 0.00 0.00 2.57
519 520 7.448588 TTGAAAACAAATGACGACAATGAAG 57.551 32.000 10.09 0.00 0.00 3.02
520 521 6.559810 TGAAAACAAATGACGACAATGAAGT 58.440 32.000 10.09 0.00 0.00 3.01
521 522 6.471841 TGAAAACAAATGACGACAATGAAGTG 59.528 34.615 10.09 0.00 0.00 3.16
522 523 5.499139 AACAAATGACGACAATGAAGTGT 57.501 34.783 10.09 0.00 0.00 3.55
523 524 5.095691 ACAAATGACGACAATGAAGTGTC 57.904 39.130 10.09 0.89 43.75 3.67
524 525 4.574421 ACAAATGACGACAATGAAGTGTCA 59.426 37.500 11.04 0.00 46.90 3.58
525 526 5.065859 ACAAATGACGACAATGAAGTGTCAA 59.934 36.000 11.04 0.00 46.90 3.18
526 527 4.732285 ATGACGACAATGAAGTGTCAAC 57.268 40.909 11.04 4.96 46.90 3.18
527 528 2.538037 TGACGACAATGAAGTGTCAACG 59.462 45.455 11.04 1.09 46.90 4.10
528 529 1.260561 ACGACAATGAAGTGTCAACGC 59.739 47.619 11.04 0.00 46.90 4.84
529 530 1.260297 CGACAATGAAGTGTCAACGCA 59.740 47.619 11.04 0.00 46.90 5.24
530 531 2.286125 CGACAATGAAGTGTCAACGCAA 60.286 45.455 11.04 0.00 46.90 4.85
531 532 3.606846 CGACAATGAAGTGTCAACGCAAT 60.607 43.478 11.04 0.00 46.90 3.56
532 533 3.631144 ACAATGAAGTGTCAACGCAATG 58.369 40.909 0.00 0.00 37.30 2.82
533 534 3.066621 ACAATGAAGTGTCAACGCAATGT 59.933 39.130 0.00 0.00 37.30 2.71
534 535 2.753989 TGAAGTGTCAACGCAATGTG 57.246 45.000 0.00 0.00 0.00 3.21
535 536 2.284190 TGAAGTGTCAACGCAATGTGA 58.716 42.857 0.00 0.00 0.00 3.58
536 537 2.680339 TGAAGTGTCAACGCAATGTGAA 59.320 40.909 0.00 0.00 0.00 3.18
537 538 3.314913 TGAAGTGTCAACGCAATGTGAAT 59.685 39.130 0.00 0.00 0.00 2.57
538 539 3.272439 AGTGTCAACGCAATGTGAATG 57.728 42.857 0.00 0.00 0.00 2.67
539 540 2.877786 AGTGTCAACGCAATGTGAATGA 59.122 40.909 0.00 1.91 0.00 2.57
540 541 3.503363 AGTGTCAACGCAATGTGAATGAT 59.497 39.130 0.00 0.00 0.00 2.45
541 542 3.848019 GTGTCAACGCAATGTGAATGATC 59.152 43.478 0.00 0.00 0.00 2.92
542 543 3.119884 TGTCAACGCAATGTGAATGATCC 60.120 43.478 0.00 0.00 0.00 3.36
543 544 3.127548 GTCAACGCAATGTGAATGATCCT 59.872 43.478 0.00 0.00 0.00 3.24
544 545 4.332543 GTCAACGCAATGTGAATGATCCTA 59.667 41.667 0.00 0.00 0.00 2.94
545 546 5.008019 GTCAACGCAATGTGAATGATCCTAT 59.992 40.000 0.00 0.00 0.00 2.57
546 547 5.007921 TCAACGCAATGTGAATGATCCTATG 59.992 40.000 0.00 0.00 0.00 2.23
547 548 4.707105 ACGCAATGTGAATGATCCTATGA 58.293 39.130 0.00 0.00 0.00 2.15
548 549 5.125356 ACGCAATGTGAATGATCCTATGAA 58.875 37.500 0.00 0.00 0.00 2.57
549 550 5.237996 ACGCAATGTGAATGATCCTATGAAG 59.762 40.000 0.00 0.00 0.00 3.02
550 551 5.467735 CGCAATGTGAATGATCCTATGAAGA 59.532 40.000 0.00 0.00 0.00 2.87
551 552 6.017687 CGCAATGTGAATGATCCTATGAAGAA 60.018 38.462 0.00 0.00 0.00 2.52
552 553 7.308408 CGCAATGTGAATGATCCTATGAAGAAT 60.308 37.037 0.00 0.00 0.00 2.40
553 554 7.808381 GCAATGTGAATGATCCTATGAAGAATG 59.192 37.037 0.00 0.00 0.00 2.67
554 555 6.872628 TGTGAATGATCCTATGAAGAATGC 57.127 37.500 0.00 0.00 0.00 3.56
555 556 6.358991 TGTGAATGATCCTATGAAGAATGCA 58.641 36.000 0.00 0.00 0.00 3.96
556 557 6.829811 TGTGAATGATCCTATGAAGAATGCAA 59.170 34.615 0.00 0.00 0.00 4.08
557 558 7.137426 GTGAATGATCCTATGAAGAATGCAAC 58.863 38.462 0.00 0.00 0.00 4.17
558 559 6.829811 TGAATGATCCTATGAAGAATGCAACA 59.170 34.615 0.00 0.00 0.00 3.33
559 560 7.339976 TGAATGATCCTATGAAGAATGCAACAA 59.660 33.333 0.00 0.00 0.00 2.83
560 561 7.649533 ATGATCCTATGAAGAATGCAACAAA 57.350 32.000 0.00 0.00 0.00 2.83
561 562 6.855836 TGATCCTATGAAGAATGCAACAAAC 58.144 36.000 0.00 0.00 0.00 2.93
562 563 6.433716 TGATCCTATGAAGAATGCAACAAACA 59.566 34.615 0.00 0.00 0.00 2.83
599 600 5.594199 ATCCTTTTACCCTTAGTGGTGTT 57.406 39.130 3.23 0.00 39.53 3.32
617 618 2.031769 TGTTCATCTGCTCAGTTTTGCG 60.032 45.455 0.00 0.00 0.00 4.85
763 764 3.096092 AGGCGGCCAATTTTATTCAGAA 58.904 40.909 23.09 0.00 0.00 3.02
1148 1154 3.303495 CACAATCATCCGTTCTACGTGTC 59.697 47.826 0.00 0.00 40.58 3.67
1227 1233 3.265791 GAGCAATCGGTTGATCTGTTCT 58.734 45.455 19.05 0.64 45.03 3.01
1269 1275 1.821216 TCTTTCTTTGGGTCGATGCC 58.179 50.000 0.00 0.00 0.00 4.40
1299 1305 6.318144 CCAAGACTCTGATAAATGAACTGCAT 59.682 38.462 0.00 0.00 39.43 3.96
1509 1515 5.772004 TGGGCATTTGTAGGTATGGTAATT 58.228 37.500 0.00 0.00 0.00 1.40
1736 1746 7.140705 TGAAATGCAGCTAATGAATTATTCCG 58.859 34.615 2.22 0.00 35.98 4.30
2440 2456 7.739498 ACAATAATAAGTTCACGGACAGTTT 57.261 32.000 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.057386 TCGCCTAATCAAGTCACACGTTA 60.057 43.478 0.00 0.00 0.00 3.18
7 8 1.990799 TCGCCTAATCAAGTCACACG 58.009 50.000 0.00 0.00 0.00 4.49
8 9 5.753438 TGATAATCGCCTAATCAAGTCACAC 59.247 40.000 0.00 0.00 0.00 3.82
9 10 5.912892 TGATAATCGCCTAATCAAGTCACA 58.087 37.500 0.00 0.00 0.00 3.58
10 11 6.870965 AGATGATAATCGCCTAATCAAGTCAC 59.129 38.462 0.00 0.00 33.60 3.67
11 12 6.870439 CAGATGATAATCGCCTAATCAAGTCA 59.130 38.462 0.00 0.00 33.60 3.41
12 13 7.093354 TCAGATGATAATCGCCTAATCAAGTC 58.907 38.462 0.00 0.00 33.60 3.01
13 14 6.997655 TCAGATGATAATCGCCTAATCAAGT 58.002 36.000 0.00 0.00 33.60 3.16
14 15 8.489990 AATCAGATGATAATCGCCTAATCAAG 57.510 34.615 0.00 0.00 33.60 3.02
15 16 8.096414 TGAATCAGATGATAATCGCCTAATCAA 58.904 33.333 0.00 0.00 33.60 2.57
16 17 7.547019 GTGAATCAGATGATAATCGCCTAATCA 59.453 37.037 0.00 0.00 33.73 2.57
17 18 7.253917 CGTGAATCAGATGATAATCGCCTAATC 60.254 40.741 0.00 0.00 33.73 1.75
18 19 6.533012 CGTGAATCAGATGATAATCGCCTAAT 59.467 38.462 0.00 0.00 33.73 1.73
19 20 5.863935 CGTGAATCAGATGATAATCGCCTAA 59.136 40.000 0.00 0.00 33.73 2.69
20 21 5.183140 TCGTGAATCAGATGATAATCGCCTA 59.817 40.000 0.00 0.00 33.73 3.93
21 22 4.021981 TCGTGAATCAGATGATAATCGCCT 60.022 41.667 0.00 0.00 33.73 5.52
22 23 4.237724 TCGTGAATCAGATGATAATCGCC 58.762 43.478 0.00 0.00 33.73 5.54
23 24 4.201570 GCTCGTGAATCAGATGATAATCGC 60.202 45.833 0.00 0.00 33.73 4.58
24 25 5.159925 AGCTCGTGAATCAGATGATAATCG 58.840 41.667 0.00 2.26 33.73 3.34
25 26 7.534282 TCTAGCTCGTGAATCAGATGATAATC 58.466 38.462 0.00 0.00 33.73 1.75
26 27 7.392953 TCTCTAGCTCGTGAATCAGATGATAAT 59.607 37.037 0.00 0.00 33.73 1.28
27 28 6.712547 TCTCTAGCTCGTGAATCAGATGATAA 59.287 38.462 0.00 0.00 33.73 1.75
28 29 6.234177 TCTCTAGCTCGTGAATCAGATGATA 58.766 40.000 0.00 0.00 33.73 2.15
29 30 5.069318 TCTCTAGCTCGTGAATCAGATGAT 58.931 41.667 0.00 0.00 36.07 2.45
30 31 4.455606 TCTCTAGCTCGTGAATCAGATGA 58.544 43.478 0.00 0.00 0.00 2.92
31 32 4.827304 TCTCTAGCTCGTGAATCAGATG 57.173 45.455 0.00 0.00 0.00 2.90
32 33 5.301551 ACAATCTCTAGCTCGTGAATCAGAT 59.698 40.000 0.00 0.00 0.00 2.90
33 34 4.642437 ACAATCTCTAGCTCGTGAATCAGA 59.358 41.667 0.00 0.00 0.00 3.27
34 35 4.930963 ACAATCTCTAGCTCGTGAATCAG 58.069 43.478 0.00 0.00 0.00 2.90
35 36 4.991153 ACAATCTCTAGCTCGTGAATCA 57.009 40.909 0.00 0.00 0.00 2.57
36 37 5.792962 CGATACAATCTCTAGCTCGTGAATC 59.207 44.000 0.00 0.00 0.00 2.52
37 38 5.694816 CGATACAATCTCTAGCTCGTGAAT 58.305 41.667 0.00 0.00 0.00 2.57
38 39 4.554919 GCGATACAATCTCTAGCTCGTGAA 60.555 45.833 0.00 0.00 0.00 3.18
39 40 3.058846 GCGATACAATCTCTAGCTCGTGA 60.059 47.826 0.00 0.00 0.00 4.35
40 41 3.230355 GCGATACAATCTCTAGCTCGTG 58.770 50.000 0.00 0.00 0.00 4.35
41 42 2.879026 TGCGATACAATCTCTAGCTCGT 59.121 45.455 0.00 0.00 0.00 4.18
42 43 3.487536 CTGCGATACAATCTCTAGCTCG 58.512 50.000 0.00 0.00 0.00 5.03
43 44 3.241701 GCTGCGATACAATCTCTAGCTC 58.758 50.000 0.00 0.00 0.00 4.09
44 45 2.625314 TGCTGCGATACAATCTCTAGCT 59.375 45.455 0.00 0.00 32.26 3.32
45 46 3.018598 TGCTGCGATACAATCTCTAGC 57.981 47.619 0.00 0.00 0.00 3.42
46 47 4.864633 TCTTGCTGCGATACAATCTCTAG 58.135 43.478 0.00 0.00 0.00 2.43
47 48 4.918810 TCTTGCTGCGATACAATCTCTA 57.081 40.909 0.00 0.00 0.00 2.43
48 49 3.808466 TCTTGCTGCGATACAATCTCT 57.192 42.857 0.00 0.00 0.00 3.10
49 50 6.530913 TTAATCTTGCTGCGATACAATCTC 57.469 37.500 0.00 0.00 0.00 2.75
50 51 6.484643 ACATTAATCTTGCTGCGATACAATCT 59.515 34.615 0.00 0.00 0.00 2.40
51 52 6.576313 CACATTAATCTTGCTGCGATACAATC 59.424 38.462 0.00 0.00 0.00 2.67
52 53 6.260714 TCACATTAATCTTGCTGCGATACAAT 59.739 34.615 0.00 0.00 0.00 2.71
53 54 5.584251 TCACATTAATCTTGCTGCGATACAA 59.416 36.000 0.00 0.00 0.00 2.41
54 55 5.006649 GTCACATTAATCTTGCTGCGATACA 59.993 40.000 0.00 0.00 0.00 2.29
55 56 5.006649 TGTCACATTAATCTTGCTGCGATAC 59.993 40.000 0.00 0.00 0.00 2.24
56 57 5.115480 TGTCACATTAATCTTGCTGCGATA 58.885 37.500 0.00 0.00 0.00 2.92
57 58 3.940852 TGTCACATTAATCTTGCTGCGAT 59.059 39.130 0.00 0.00 0.00 4.58
58 59 3.333804 TGTCACATTAATCTTGCTGCGA 58.666 40.909 0.00 0.00 0.00 5.10
59 60 3.745332 TGTCACATTAATCTTGCTGCG 57.255 42.857 0.00 0.00 0.00 5.18
60 61 5.051891 AGTTGTCACATTAATCTTGCTGC 57.948 39.130 0.00 0.00 0.00 5.25
61 62 6.546395 GGTAGTTGTCACATTAATCTTGCTG 58.454 40.000 0.00 0.00 0.00 4.41
62 63 5.351465 CGGTAGTTGTCACATTAATCTTGCT 59.649 40.000 0.00 0.00 0.00 3.91
63 64 5.121768 ACGGTAGTTGTCACATTAATCTTGC 59.878 40.000 0.00 0.00 0.00 4.01
64 65 6.721571 ACGGTAGTTGTCACATTAATCTTG 57.278 37.500 0.00 0.00 0.00 3.02
65 66 8.092687 AGTAACGGTAGTTGTCACATTAATCTT 58.907 33.333 0.00 0.00 41.35 2.40
66 67 7.609056 AGTAACGGTAGTTGTCACATTAATCT 58.391 34.615 0.00 0.00 41.35 2.40
67 68 7.823149 AGTAACGGTAGTTGTCACATTAATC 57.177 36.000 0.00 0.00 41.35 1.75
68 69 7.485913 CGTAGTAACGGTAGTTGTCACATTAAT 59.514 37.037 0.00 0.00 45.50 1.40
69 70 6.801377 CGTAGTAACGGTAGTTGTCACATTAA 59.199 38.462 0.00 0.00 45.50 1.40
70 71 6.314018 CGTAGTAACGGTAGTTGTCACATTA 58.686 40.000 0.00 0.00 45.50 1.90
71 72 5.156355 CGTAGTAACGGTAGTTGTCACATT 58.844 41.667 0.00 0.00 45.50 2.71
72 73 4.726416 CGTAGTAACGGTAGTTGTCACAT 58.274 43.478 0.00 0.00 45.50 3.21
73 74 4.145876 CGTAGTAACGGTAGTTGTCACA 57.854 45.455 0.00 0.00 45.50 3.58
86 87 2.381911 TGAGATCCCCCACGTAGTAAC 58.618 52.381 0.00 0.00 41.61 2.50
87 88 2.832643 TGAGATCCCCCACGTAGTAA 57.167 50.000 0.00 0.00 41.61 2.24
88 89 2.832643 TTGAGATCCCCCACGTAGTA 57.167 50.000 0.00 0.00 41.61 1.82
90 91 1.139058 CCTTTGAGATCCCCCACGTAG 59.861 57.143 0.00 0.00 0.00 3.51
91 92 1.200519 CCTTTGAGATCCCCCACGTA 58.799 55.000 0.00 0.00 0.00 3.57
92 93 1.991230 CCTTTGAGATCCCCCACGT 59.009 57.895 0.00 0.00 0.00 4.49
93 94 1.452108 GCCTTTGAGATCCCCCACG 60.452 63.158 0.00 0.00 0.00 4.94
94 95 1.076705 GGCCTTTGAGATCCCCCAC 60.077 63.158 0.00 0.00 0.00 4.61
95 96 1.145900 TTGGCCTTTGAGATCCCCCA 61.146 55.000 3.32 0.00 0.00 4.96
96 97 0.041090 TTTGGCCTTTGAGATCCCCC 59.959 55.000 3.32 0.00 0.00 5.40
97 98 1.827344 CTTTTGGCCTTTGAGATCCCC 59.173 52.381 3.32 0.00 0.00 4.81
98 99 2.757314 CTCTTTTGGCCTTTGAGATCCC 59.243 50.000 3.32 0.00 0.00 3.85
99 100 3.690460 TCTCTTTTGGCCTTTGAGATCC 58.310 45.455 3.32 0.00 0.00 3.36
100 101 7.579761 AATATCTCTTTTGGCCTTTGAGATC 57.420 36.000 23.78 0.00 41.71 2.75
101 102 9.652114 AATAATATCTCTTTTGGCCTTTGAGAT 57.348 29.630 23.66 23.66 43.94 2.75
102 103 9.479549 AAATAATATCTCTTTTGGCCTTTGAGA 57.520 29.630 16.31 16.31 38.03 3.27
125 126 9.448438 GGCCTTTGAAATTTACCTTTCATAAAT 57.552 29.630 0.00 0.00 42.87 1.40
126 127 8.655901 AGGCCTTTGAAATTTACCTTTCATAAA 58.344 29.630 0.00 0.00 42.87 1.40
127 128 8.201242 AGGCCTTTGAAATTTACCTTTCATAA 57.799 30.769 0.00 0.00 42.87 1.90
128 129 7.673926 AGAGGCCTTTGAAATTTACCTTTCATA 59.326 33.333 6.77 0.00 42.87 2.15
129 130 6.498303 AGAGGCCTTTGAAATTTACCTTTCAT 59.502 34.615 6.77 0.00 42.87 2.57
130 131 5.838521 AGAGGCCTTTGAAATTTACCTTTCA 59.161 36.000 6.77 0.00 41.97 2.69
131 132 6.346477 AGAGGCCTTTGAAATTTACCTTTC 57.654 37.500 6.77 0.00 36.00 2.62
132 133 6.071334 GCTAGAGGCCTTTGAAATTTACCTTT 60.071 38.462 6.77 0.00 34.27 3.11
133 134 5.419155 GCTAGAGGCCTTTGAAATTTACCTT 59.581 40.000 6.77 0.00 34.27 3.50
134 135 4.950475 GCTAGAGGCCTTTGAAATTTACCT 59.050 41.667 6.77 0.00 34.27 3.08
135 136 4.201920 CGCTAGAGGCCTTTGAAATTTACC 60.202 45.833 6.77 0.00 37.74 2.85
136 137 4.634443 TCGCTAGAGGCCTTTGAAATTTAC 59.366 41.667 6.77 0.00 37.74 2.01
137 138 4.634443 GTCGCTAGAGGCCTTTGAAATTTA 59.366 41.667 6.77 0.00 37.74 1.40
138 139 3.440522 GTCGCTAGAGGCCTTTGAAATTT 59.559 43.478 6.77 0.00 37.74 1.82
139 140 3.010420 GTCGCTAGAGGCCTTTGAAATT 58.990 45.455 6.77 0.00 37.74 1.82
140 141 2.633488 GTCGCTAGAGGCCTTTGAAAT 58.367 47.619 6.77 0.00 37.74 2.17
141 142 1.671850 CGTCGCTAGAGGCCTTTGAAA 60.672 52.381 6.77 0.00 37.74 2.69
142 143 0.108804 CGTCGCTAGAGGCCTTTGAA 60.109 55.000 6.77 0.00 37.74 2.69
143 144 0.963856 TCGTCGCTAGAGGCCTTTGA 60.964 55.000 6.77 0.00 37.74 2.69
144 145 0.526524 CTCGTCGCTAGAGGCCTTTG 60.527 60.000 6.77 0.82 37.74 2.77
145 146 1.810532 CTCGTCGCTAGAGGCCTTT 59.189 57.895 6.77 2.86 37.74 3.11
146 147 2.776913 GCTCGTCGCTAGAGGCCTT 61.777 63.158 6.77 0.00 37.74 4.35
147 148 3.213402 GCTCGTCGCTAGAGGCCT 61.213 66.667 3.86 3.86 37.74 5.19
148 149 3.477224 CTGCTCGTCGCTAGAGGCC 62.477 68.421 0.00 0.00 40.11 5.19
149 150 2.025441 CTGCTCGTCGCTAGAGGC 59.975 66.667 0.00 0.00 40.11 4.70
150 151 0.171455 AAACTGCTCGTCGCTAGAGG 59.829 55.000 0.00 0.00 40.11 3.69
151 152 1.135660 TGAAACTGCTCGTCGCTAGAG 60.136 52.381 0.00 0.00 40.11 2.43
152 153 0.879090 TGAAACTGCTCGTCGCTAGA 59.121 50.000 0.00 0.00 40.11 2.43
153 154 1.914634 ATGAAACTGCTCGTCGCTAG 58.085 50.000 0.00 0.00 40.11 3.42
154 155 2.259618 GAATGAAACTGCTCGTCGCTA 58.740 47.619 0.00 0.00 40.11 4.26
155 156 1.071605 GAATGAAACTGCTCGTCGCT 58.928 50.000 0.00 0.00 40.11 4.93
156 157 0.246912 CGAATGAAACTGCTCGTCGC 60.247 55.000 0.00 0.00 39.77 5.19
157 158 1.060713 ACGAATGAAACTGCTCGTCG 58.939 50.000 0.00 0.00 0.00 5.12
158 159 3.673809 AGTTACGAATGAAACTGCTCGTC 59.326 43.478 0.00 0.00 34.70 4.20
159 160 3.650139 AGTTACGAATGAAACTGCTCGT 58.350 40.909 1.36 1.36 34.70 4.18
160 161 4.647291 AAGTTACGAATGAAACTGCTCG 57.353 40.909 0.00 0.00 36.12 5.03
161 162 6.575201 CAGAAAAGTTACGAATGAAACTGCTC 59.425 38.462 0.00 0.00 36.12 4.26
162 163 6.430451 CAGAAAAGTTACGAATGAAACTGCT 58.570 36.000 0.00 0.00 36.12 4.24
163 164 5.115622 GCAGAAAAGTTACGAATGAAACTGC 59.884 40.000 0.00 0.00 36.12 4.40
164 165 6.198687 TGCAGAAAAGTTACGAATGAAACTG 58.801 36.000 0.00 0.00 36.12 3.16
165 166 6.371809 TGCAGAAAAGTTACGAATGAAACT 57.628 33.333 0.00 0.00 37.54 2.66
166 167 6.910433 TCTTGCAGAAAAGTTACGAATGAAAC 59.090 34.615 0.00 0.00 0.00 2.78
167 168 7.022055 TCTTGCAGAAAAGTTACGAATGAAA 57.978 32.000 0.00 0.00 0.00 2.69
168 169 6.612247 TCTTGCAGAAAAGTTACGAATGAA 57.388 33.333 0.00 0.00 0.00 2.57
169 170 6.260050 AGTTCTTGCAGAAAAGTTACGAATGA 59.740 34.615 0.00 0.00 35.75 2.57
170 171 6.358030 CAGTTCTTGCAGAAAAGTTACGAATG 59.642 38.462 0.00 0.00 35.75 2.67
171 172 6.260050 TCAGTTCTTGCAGAAAAGTTACGAAT 59.740 34.615 0.00 0.00 35.75 3.34
172 173 5.583061 TCAGTTCTTGCAGAAAAGTTACGAA 59.417 36.000 0.00 0.00 35.75 3.85
173 174 5.113383 TCAGTTCTTGCAGAAAAGTTACGA 58.887 37.500 0.00 0.00 35.75 3.43
174 175 5.403897 TCAGTTCTTGCAGAAAAGTTACG 57.596 39.130 0.96 0.00 35.75 3.18
175 176 7.417612 TCATTCAGTTCTTGCAGAAAAGTTAC 58.582 34.615 0.96 0.00 35.75 2.50
176 177 7.498900 TCTCATTCAGTTCTTGCAGAAAAGTTA 59.501 33.333 0.96 0.00 35.75 2.24
177 178 6.319658 TCTCATTCAGTTCTTGCAGAAAAGTT 59.680 34.615 0.96 0.00 35.75 2.66
178 179 5.824624 TCTCATTCAGTTCTTGCAGAAAAGT 59.175 36.000 0.96 0.00 35.75 2.66
179 180 6.309712 TCTCATTCAGTTCTTGCAGAAAAG 57.690 37.500 0.96 0.00 35.75 2.27
180 181 6.889301 ATCTCATTCAGTTCTTGCAGAAAA 57.111 33.333 0.96 0.00 35.75 2.29
181 182 6.263842 ACAATCTCATTCAGTTCTTGCAGAAA 59.736 34.615 0.96 0.00 35.75 2.52
182 183 5.766670 ACAATCTCATTCAGTTCTTGCAGAA 59.233 36.000 0.00 0.00 0.00 3.02
183 184 5.311265 ACAATCTCATTCAGTTCTTGCAGA 58.689 37.500 0.00 0.00 0.00 4.26
184 185 5.624344 ACAATCTCATTCAGTTCTTGCAG 57.376 39.130 0.00 0.00 0.00 4.41
185 186 4.152938 CGACAATCTCATTCAGTTCTTGCA 59.847 41.667 0.00 0.00 0.00 4.08
186 187 4.645956 CGACAATCTCATTCAGTTCTTGC 58.354 43.478 0.00 0.00 0.00 4.01
187 188 4.645956 GCGACAATCTCATTCAGTTCTTG 58.354 43.478 0.00 0.00 0.00 3.02
188 189 3.369147 CGCGACAATCTCATTCAGTTCTT 59.631 43.478 0.00 0.00 0.00 2.52
189 190 2.926200 CGCGACAATCTCATTCAGTTCT 59.074 45.455 0.00 0.00 0.00 3.01
190 191 2.029728 CCGCGACAATCTCATTCAGTTC 59.970 50.000 8.23 0.00 0.00 3.01
191 192 2.002586 CCGCGACAATCTCATTCAGTT 58.997 47.619 8.23 0.00 0.00 3.16
192 193 1.645034 CCGCGACAATCTCATTCAGT 58.355 50.000 8.23 0.00 0.00 3.41
193 194 0.302890 GCCGCGACAATCTCATTCAG 59.697 55.000 8.23 0.00 0.00 3.02
194 195 1.089481 GGCCGCGACAATCTCATTCA 61.089 55.000 8.23 0.00 0.00 2.57
195 196 1.643832 GGCCGCGACAATCTCATTC 59.356 57.895 8.23 0.00 0.00 2.67
196 197 1.819632 GGGCCGCGACAATCTCATT 60.820 57.895 8.23 0.00 0.00 2.57
197 198 2.203070 GGGCCGCGACAATCTCAT 60.203 61.111 8.23 0.00 0.00 2.90
198 199 4.467084 GGGGCCGCGACAATCTCA 62.467 66.667 8.23 0.00 0.00 3.27
212 213 2.755064 TTGATGCATGCACCGGGG 60.755 61.111 25.37 0.84 0.00 5.73
213 214 1.314534 TTCTTGATGCATGCACCGGG 61.315 55.000 25.37 10.29 0.00 5.73
214 215 0.527113 TTTCTTGATGCATGCACCGG 59.473 50.000 25.37 10.69 0.00 5.28
215 216 2.572191 ATTTCTTGATGCATGCACCG 57.428 45.000 25.37 11.57 0.00 4.94
216 217 4.142315 ACACTATTTCTTGATGCATGCACC 60.142 41.667 25.37 15.61 0.00 5.01
217 218 4.990257 ACACTATTTCTTGATGCATGCAC 58.010 39.130 25.37 17.16 0.00 4.57
218 219 6.543100 TGATACACTATTTCTTGATGCATGCA 59.457 34.615 25.04 25.04 0.00 3.96
219 220 6.962686 TGATACACTATTTCTTGATGCATGC 58.037 36.000 11.82 11.82 0.00 4.06
220 221 7.041303 AGCTGATACACTATTTCTTGATGCATG 60.041 37.037 2.46 0.00 0.00 4.06
221 222 6.996879 AGCTGATACACTATTTCTTGATGCAT 59.003 34.615 0.00 0.00 0.00 3.96
222 223 6.351711 AGCTGATACACTATTTCTTGATGCA 58.648 36.000 0.00 0.00 0.00 3.96
223 224 6.073331 GGAGCTGATACACTATTTCTTGATGC 60.073 42.308 0.00 0.00 0.00 3.91
224 225 6.988580 TGGAGCTGATACACTATTTCTTGATG 59.011 38.462 0.00 0.00 0.00 3.07
225 226 7.129457 TGGAGCTGATACACTATTTCTTGAT 57.871 36.000 0.00 0.00 0.00 2.57
226 227 6.544928 TGGAGCTGATACACTATTTCTTGA 57.455 37.500 0.00 0.00 0.00 3.02
227 228 6.988580 TGATGGAGCTGATACACTATTTCTTG 59.011 38.462 0.00 0.00 0.00 3.02
228 229 7.129457 TGATGGAGCTGATACACTATTTCTT 57.871 36.000 0.00 0.00 0.00 2.52
229 230 6.737720 TGATGGAGCTGATACACTATTTCT 57.262 37.500 0.00 0.00 0.00 2.52
230 231 6.426328 CCTTGATGGAGCTGATACACTATTTC 59.574 42.308 0.00 0.00 38.35 2.17
231 232 6.126652 ACCTTGATGGAGCTGATACACTATTT 60.127 38.462 0.00 0.00 39.71 1.40
232 233 5.367937 ACCTTGATGGAGCTGATACACTATT 59.632 40.000 0.00 0.00 39.71 1.73
233 234 4.904251 ACCTTGATGGAGCTGATACACTAT 59.096 41.667 0.00 0.00 39.71 2.12
234 235 4.100035 CACCTTGATGGAGCTGATACACTA 59.900 45.833 0.00 0.00 39.71 2.74
235 236 3.110705 ACCTTGATGGAGCTGATACACT 58.889 45.455 0.00 0.00 39.71 3.55
236 237 3.201290 CACCTTGATGGAGCTGATACAC 58.799 50.000 0.00 0.00 39.71 2.90
237 238 2.171237 CCACCTTGATGGAGCTGATACA 59.829 50.000 0.00 0.00 43.02 2.29
238 239 2.435805 TCCACCTTGATGGAGCTGATAC 59.564 50.000 0.00 0.00 44.14 2.24
239 240 2.763039 TCCACCTTGATGGAGCTGATA 58.237 47.619 0.00 0.00 44.14 2.15
240 241 1.588239 TCCACCTTGATGGAGCTGAT 58.412 50.000 0.00 0.00 44.14 2.90
241 242 3.087343 TCCACCTTGATGGAGCTGA 57.913 52.632 0.00 0.00 44.14 4.26
247 248 2.511659 CATAGGCATCCACCTTGATGG 58.488 52.381 3.47 0.00 41.96 3.51
248 249 1.884579 GCATAGGCATCCACCTTGATG 59.115 52.381 0.00 0.00 44.02 3.07
249 250 1.202976 GGCATAGGCATCCACCTTGAT 60.203 52.381 0.15 0.00 43.71 2.57
250 251 0.183492 GGCATAGGCATCCACCTTGA 59.817 55.000 0.15 0.00 43.71 3.02
251 252 1.168407 CGGCATAGGCATCCACCTTG 61.168 60.000 0.15 0.00 43.71 3.61
252 253 1.149174 CGGCATAGGCATCCACCTT 59.851 57.895 0.15 0.00 43.71 3.50
253 254 2.822637 CCGGCATAGGCATCCACCT 61.823 63.158 0.15 0.00 43.71 4.00
254 255 2.281761 CCGGCATAGGCATCCACC 60.282 66.667 0.15 0.00 43.71 4.61
255 256 1.893808 CACCGGCATAGGCATCCAC 60.894 63.158 0.00 0.00 43.71 4.02
256 257 2.510411 CACCGGCATAGGCATCCA 59.490 61.111 0.00 0.00 43.71 3.41
257 258 2.281761 CCACCGGCATAGGCATCC 60.282 66.667 0.00 0.00 43.71 3.51
258 259 2.281761 CCCACCGGCATAGGCATC 60.282 66.667 0.00 0.00 43.71 3.91
259 260 3.096495 ACCCACCGGCATAGGCAT 61.096 61.111 0.00 0.00 43.71 4.40
260 261 4.108299 CACCCACCGGCATAGGCA 62.108 66.667 0.00 0.00 43.71 4.75
262 263 3.797353 AGCACCCACCGGCATAGG 61.797 66.667 0.00 0.00 37.30 2.57
263 264 2.329539 ATCAGCACCCACCGGCATAG 62.330 60.000 0.00 0.00 0.00 2.23
264 265 1.051556 TATCAGCACCCACCGGCATA 61.052 55.000 0.00 0.00 0.00 3.14
265 266 1.920734 TTATCAGCACCCACCGGCAT 61.921 55.000 0.00 0.00 0.00 4.40
266 267 2.535485 CTTATCAGCACCCACCGGCA 62.535 60.000 0.00 0.00 0.00 5.69
267 268 1.819632 CTTATCAGCACCCACCGGC 60.820 63.158 0.00 0.00 0.00 6.13
268 269 1.153168 CCTTATCAGCACCCACCGG 60.153 63.158 0.00 0.00 0.00 5.28
269 270 1.153168 CCCTTATCAGCACCCACCG 60.153 63.158 0.00 0.00 0.00 4.94
270 271 0.181350 CTCCCTTATCAGCACCCACC 59.819 60.000 0.00 0.00 0.00 4.61
271 272 1.134371 GTCTCCCTTATCAGCACCCAC 60.134 57.143 0.00 0.00 0.00 4.61
272 273 1.204146 GTCTCCCTTATCAGCACCCA 58.796 55.000 0.00 0.00 0.00 4.51
273 274 1.204146 TGTCTCCCTTATCAGCACCC 58.796 55.000 0.00 0.00 0.00 4.61
274 275 3.118261 TCAATGTCTCCCTTATCAGCACC 60.118 47.826 0.00 0.00 0.00 5.01
275 276 4.142609 TCAATGTCTCCCTTATCAGCAC 57.857 45.455 0.00 0.00 0.00 4.40
276 277 4.445305 CCATCAATGTCTCCCTTATCAGCA 60.445 45.833 0.00 0.00 0.00 4.41
277 278 4.070716 CCATCAATGTCTCCCTTATCAGC 58.929 47.826 0.00 0.00 0.00 4.26
278 279 4.103785 ACCCATCAATGTCTCCCTTATCAG 59.896 45.833 0.00 0.00 0.00 2.90
279 280 4.047166 ACCCATCAATGTCTCCCTTATCA 58.953 43.478 0.00 0.00 0.00 2.15
280 281 4.713792 ACCCATCAATGTCTCCCTTATC 57.286 45.455 0.00 0.00 0.00 1.75
281 282 5.203528 CAAACCCATCAATGTCTCCCTTAT 58.796 41.667 0.00 0.00 0.00 1.73
282 283 4.044065 ACAAACCCATCAATGTCTCCCTTA 59.956 41.667 0.00 0.00 0.00 2.69
283 284 3.181418 ACAAACCCATCAATGTCTCCCTT 60.181 43.478 0.00 0.00 0.00 3.95
284 285 2.379907 ACAAACCCATCAATGTCTCCCT 59.620 45.455 0.00 0.00 0.00 4.20
285 286 2.493278 CACAAACCCATCAATGTCTCCC 59.507 50.000 0.00 0.00 0.00 4.30
286 287 3.157087 ACACAAACCCATCAATGTCTCC 58.843 45.455 0.00 0.00 0.00 3.71
287 288 4.074970 AGACACAAACCCATCAATGTCTC 58.925 43.478 0.00 0.00 42.29 3.36
288 289 4.104383 AGACACAAACCCATCAATGTCT 57.896 40.909 0.00 0.00 41.42 3.41
289 290 5.957842 TTAGACACAAACCCATCAATGTC 57.042 39.130 0.00 0.00 37.35 3.06
290 291 5.336690 GCATTAGACACAAACCCATCAATGT 60.337 40.000 0.00 0.00 0.00 2.71
291 292 5.104374 GCATTAGACACAAACCCATCAATG 58.896 41.667 0.00 0.00 0.00 2.82
292 293 4.771577 TGCATTAGACACAAACCCATCAAT 59.228 37.500 0.00 0.00 0.00 2.57
293 294 4.148079 TGCATTAGACACAAACCCATCAA 58.852 39.130 0.00 0.00 0.00 2.57
294 295 3.760738 TGCATTAGACACAAACCCATCA 58.239 40.909 0.00 0.00 0.00 3.07
295 296 4.158394 ACATGCATTAGACACAAACCCATC 59.842 41.667 0.00 0.00 0.00 3.51
296 297 4.088634 ACATGCATTAGACACAAACCCAT 58.911 39.130 0.00 0.00 0.00 4.00
297 298 3.495331 ACATGCATTAGACACAAACCCA 58.505 40.909 0.00 0.00 0.00 4.51
298 299 4.438744 GCTACATGCATTAGACACAAACCC 60.439 45.833 15.69 0.00 42.31 4.11
299 300 4.662145 GCTACATGCATTAGACACAAACC 58.338 43.478 15.69 0.00 42.31 3.27
320 321 1.071605 CACTACGAGCACCTCTTTGC 58.928 55.000 0.00 0.00 43.34 3.68
321 322 2.329379 GTCACTACGAGCACCTCTTTG 58.671 52.381 0.00 0.00 0.00 2.77
322 323 1.272769 GGTCACTACGAGCACCTCTTT 59.727 52.381 0.00 0.00 41.98 2.52
323 324 0.889306 GGTCACTACGAGCACCTCTT 59.111 55.000 0.00 0.00 41.98 2.85
324 325 0.251209 TGGTCACTACGAGCACCTCT 60.251 55.000 0.00 0.00 47.00 3.69
325 326 2.264124 TGGTCACTACGAGCACCTC 58.736 57.895 0.00 0.00 47.00 3.85
326 327 4.513777 TGGTCACTACGAGCACCT 57.486 55.556 0.00 0.00 47.00 4.00
330 331 4.113354 CCTAAGAAATGGTCACTACGAGC 58.887 47.826 0.00 0.00 42.75 5.03
331 332 4.113354 GCCTAAGAAATGGTCACTACGAG 58.887 47.826 0.00 0.00 0.00 4.18
332 333 3.512329 TGCCTAAGAAATGGTCACTACGA 59.488 43.478 0.00 0.00 0.00 3.43
333 334 3.857052 TGCCTAAGAAATGGTCACTACG 58.143 45.455 0.00 0.00 0.00 3.51
334 335 4.081087 TCCTGCCTAAGAAATGGTCACTAC 60.081 45.833 0.00 0.00 0.00 2.73
335 336 4.101114 TCCTGCCTAAGAAATGGTCACTA 58.899 43.478 0.00 0.00 0.00 2.74
336 337 2.912956 TCCTGCCTAAGAAATGGTCACT 59.087 45.455 0.00 0.00 0.00 3.41
337 338 3.055094 TCTCCTGCCTAAGAAATGGTCAC 60.055 47.826 0.00 0.00 0.00 3.67
338 339 3.181329 TCTCCTGCCTAAGAAATGGTCA 58.819 45.455 0.00 0.00 0.00 4.02
339 340 3.914426 TCTCCTGCCTAAGAAATGGTC 57.086 47.619 0.00 0.00 0.00 4.02
340 341 3.686691 GCATCTCCTGCCTAAGAAATGGT 60.687 47.826 0.00 0.00 45.66 3.55
341 342 2.883386 GCATCTCCTGCCTAAGAAATGG 59.117 50.000 0.00 0.00 45.66 3.16
369 370 8.958175 TGCGAGATCGTTAAAATGTAATTTTT 57.042 26.923 3.94 0.00 46.84 1.94
371 372 7.186804 CCTGCGAGATCGTTAAAATGTAATTT 58.813 34.615 3.94 0.00 44.88 1.82
372 373 6.715464 CCTGCGAGATCGTTAAAATGTAATT 58.285 36.000 3.94 0.00 42.22 1.40
373 374 5.277345 GCCTGCGAGATCGTTAAAATGTAAT 60.277 40.000 3.94 0.00 42.22 1.89
374 375 4.033587 GCCTGCGAGATCGTTAAAATGTAA 59.966 41.667 3.94 0.00 42.22 2.41
375 376 3.554324 GCCTGCGAGATCGTTAAAATGTA 59.446 43.478 3.94 0.00 42.22 2.29
376 377 2.351726 GCCTGCGAGATCGTTAAAATGT 59.648 45.455 3.94 0.00 42.22 2.71
377 378 2.351418 TGCCTGCGAGATCGTTAAAATG 59.649 45.455 3.94 0.00 42.22 2.32
378 379 2.627945 TGCCTGCGAGATCGTTAAAAT 58.372 42.857 3.94 0.00 42.22 1.82
379 380 2.087501 TGCCTGCGAGATCGTTAAAA 57.912 45.000 3.94 0.00 42.22 1.52
380 381 2.159099 AGATGCCTGCGAGATCGTTAAA 60.159 45.455 3.94 0.00 42.22 1.52
381 382 1.409064 AGATGCCTGCGAGATCGTTAA 59.591 47.619 3.94 0.00 42.22 2.01
382 383 1.001268 GAGATGCCTGCGAGATCGTTA 60.001 52.381 3.94 0.00 42.22 3.18
383 384 0.249238 GAGATGCCTGCGAGATCGTT 60.249 55.000 3.94 0.00 42.22 3.85
384 385 1.361993 GAGATGCCTGCGAGATCGT 59.638 57.895 3.94 0.00 42.22 3.73
385 386 1.728778 CGAGATGCCTGCGAGATCG 60.729 63.158 0.00 0.00 43.27 3.69
386 387 1.656998 TCGAGATGCCTGCGAGATC 59.343 57.895 0.00 0.00 0.00 2.75
387 388 3.847621 TCGAGATGCCTGCGAGAT 58.152 55.556 0.00 0.00 0.00 2.75
390 391 0.249197 CATTCTCGAGATGCCTGCGA 60.249 55.000 17.44 0.00 0.00 5.10
391 392 0.249197 TCATTCTCGAGATGCCTGCG 60.249 55.000 17.44 0.26 0.00 5.18
392 393 1.202510 ACTCATTCTCGAGATGCCTGC 60.203 52.381 17.44 0.00 36.47 4.85
393 394 2.864946 CAACTCATTCTCGAGATGCCTG 59.135 50.000 17.44 11.56 36.47 4.85
394 395 2.158986 CCAACTCATTCTCGAGATGCCT 60.159 50.000 17.44 0.00 35.19 4.75
395 396 2.208431 CCAACTCATTCTCGAGATGCC 58.792 52.381 17.44 0.00 35.19 4.40
396 397 2.863137 GACCAACTCATTCTCGAGATGC 59.137 50.000 17.44 0.00 35.19 3.91
397 398 4.358851 GAGACCAACTCATTCTCGAGATG 58.641 47.826 17.44 15.82 44.36 2.90
398 399 4.647424 GAGACCAACTCATTCTCGAGAT 57.353 45.455 17.44 3.69 44.36 2.75
403 404 4.307432 TGTTTCGAGACCAACTCATTCTC 58.693 43.478 3.33 0.00 45.14 2.87
404 405 4.336889 TGTTTCGAGACCAACTCATTCT 57.663 40.909 3.33 0.00 45.14 2.40
405 406 5.179368 TCAATGTTTCGAGACCAACTCATTC 59.821 40.000 3.33 0.00 45.14 2.67
406 407 5.063204 TCAATGTTTCGAGACCAACTCATT 58.937 37.500 3.33 0.00 45.14 2.57
407 408 4.641396 TCAATGTTTCGAGACCAACTCAT 58.359 39.130 3.33 0.00 45.14 2.90
408 409 4.066646 TCAATGTTTCGAGACCAACTCA 57.933 40.909 3.33 0.00 45.14 3.41
409 410 4.690748 TCATCAATGTTTCGAGACCAACTC 59.309 41.667 3.33 0.00 41.79 3.01
410 411 4.641396 TCATCAATGTTTCGAGACCAACT 58.359 39.130 3.33 0.00 0.00 3.16
411 412 4.452455 ACTCATCAATGTTTCGAGACCAAC 59.548 41.667 3.33 0.00 0.00 3.77
412 413 4.641396 ACTCATCAATGTTTCGAGACCAA 58.359 39.130 3.33 0.00 0.00 3.67
413 414 4.271696 ACTCATCAATGTTTCGAGACCA 57.728 40.909 3.33 0.00 0.00 4.02
414 415 4.142816 CCAACTCATCAATGTTTCGAGACC 60.143 45.833 3.33 0.00 0.00 3.85
415 416 4.452455 ACCAACTCATCAATGTTTCGAGAC 59.548 41.667 0.00 0.00 0.00 3.36
416 417 4.641396 ACCAACTCATCAATGTTTCGAGA 58.359 39.130 0.00 0.00 0.00 4.04
417 418 4.692625 AGACCAACTCATCAATGTTTCGAG 59.307 41.667 0.00 0.00 0.00 4.04
418 419 4.641396 AGACCAACTCATCAATGTTTCGA 58.359 39.130 0.00 0.00 0.00 3.71
419 420 4.434725 CGAGACCAACTCATCAATGTTTCG 60.435 45.833 0.00 0.00 45.14 3.46
420 421 4.690748 TCGAGACCAACTCATCAATGTTTC 59.309 41.667 0.00 0.00 45.14 2.78
421 422 4.641396 TCGAGACCAACTCATCAATGTTT 58.359 39.130 0.00 0.00 45.14 2.83
422 423 4.271696 TCGAGACCAACTCATCAATGTT 57.728 40.909 0.00 0.00 45.14 2.71
423 424 3.961480 TCGAGACCAACTCATCAATGT 57.039 42.857 0.00 0.00 45.14 2.71
424 425 5.448225 CCATTTCGAGACCAACTCATCAATG 60.448 44.000 0.00 0.00 45.14 2.82
425 426 4.637534 CCATTTCGAGACCAACTCATCAAT 59.362 41.667 0.00 0.00 45.14 2.57
426 427 4.002982 CCATTTCGAGACCAACTCATCAA 58.997 43.478 0.00 0.00 45.14 2.57
427 428 3.007940 ACCATTTCGAGACCAACTCATCA 59.992 43.478 0.00 0.00 45.14 3.07
428 429 3.600388 ACCATTTCGAGACCAACTCATC 58.400 45.455 0.00 0.00 45.14 2.92
429 430 3.007940 TGACCATTTCGAGACCAACTCAT 59.992 43.478 0.00 0.00 45.14 2.90
430 431 2.367241 TGACCATTTCGAGACCAACTCA 59.633 45.455 0.00 0.00 45.14 3.41
431 432 3.040147 TGACCATTTCGAGACCAACTC 57.960 47.619 0.00 0.00 41.79 3.01
432 433 3.139077 GTTGACCATTTCGAGACCAACT 58.861 45.455 0.00 0.00 32.27 3.16
433 434 2.096417 CGTTGACCATTTCGAGACCAAC 60.096 50.000 0.00 0.00 0.00 3.77
434 435 2.139917 CGTTGACCATTTCGAGACCAA 58.860 47.619 0.00 0.00 0.00 3.67
435 436 1.341852 TCGTTGACCATTTCGAGACCA 59.658 47.619 0.00 0.00 0.00 4.02
436 437 1.725164 GTCGTTGACCATTTCGAGACC 59.275 52.381 0.00 0.00 33.09 3.85
437 438 2.400399 TGTCGTTGACCATTTCGAGAC 58.600 47.619 0.00 0.00 33.09 3.36
438 439 2.804697 TGTCGTTGACCATTTCGAGA 57.195 45.000 0.00 0.00 33.09 4.04
439 440 3.057019 TCTTGTCGTTGACCATTTCGAG 58.943 45.455 0.00 0.00 33.09 4.04
440 441 3.100658 TCTTGTCGTTGACCATTTCGA 57.899 42.857 0.00 0.00 0.00 3.71
441 442 3.870723 TTCTTGTCGTTGACCATTTCG 57.129 42.857 0.00 0.00 0.00 3.46
442 443 5.356882 TCATTCTTGTCGTTGACCATTTC 57.643 39.130 0.00 0.00 0.00 2.17
443 444 4.216257 CCTCATTCTTGTCGTTGACCATTT 59.784 41.667 0.00 0.00 0.00 2.32
444 445 3.753272 CCTCATTCTTGTCGTTGACCATT 59.247 43.478 0.00 0.00 0.00 3.16
445 446 3.007940 TCCTCATTCTTGTCGTTGACCAT 59.992 43.478 0.00 0.00 0.00 3.55
446 447 2.367241 TCCTCATTCTTGTCGTTGACCA 59.633 45.455 0.00 0.00 0.00 4.02
447 448 2.996621 CTCCTCATTCTTGTCGTTGACC 59.003 50.000 0.00 0.00 0.00 4.02
448 449 2.413453 GCTCCTCATTCTTGTCGTTGAC 59.587 50.000 0.00 0.00 0.00 3.18
449 450 2.612972 GGCTCCTCATTCTTGTCGTTGA 60.613 50.000 0.00 0.00 0.00 3.18
450 451 1.734465 GGCTCCTCATTCTTGTCGTTG 59.266 52.381 0.00 0.00 0.00 4.10
451 452 1.347707 TGGCTCCTCATTCTTGTCGTT 59.652 47.619 0.00 0.00 0.00 3.85
452 453 0.976641 TGGCTCCTCATTCTTGTCGT 59.023 50.000 0.00 0.00 0.00 4.34
453 454 2.208431 GATGGCTCCTCATTCTTGTCG 58.792 52.381 0.00 0.00 0.00 4.35
454 455 3.272574 TGATGGCTCCTCATTCTTGTC 57.727 47.619 0.00 0.00 0.00 3.18
455 456 3.009916 AGTTGATGGCTCCTCATTCTTGT 59.990 43.478 0.00 0.00 0.00 3.16
456 457 3.618351 AGTTGATGGCTCCTCATTCTTG 58.382 45.455 0.00 0.00 0.00 3.02
457 458 4.681781 CGTAGTTGATGGCTCCTCATTCTT 60.682 45.833 0.00 0.00 0.00 2.52
458 459 3.181471 CGTAGTTGATGGCTCCTCATTCT 60.181 47.826 0.00 0.00 0.00 2.40
459 460 3.126831 CGTAGTTGATGGCTCCTCATTC 58.873 50.000 0.00 0.00 0.00 2.67
460 461 2.766263 TCGTAGTTGATGGCTCCTCATT 59.234 45.455 0.00 0.00 0.00 2.57
461 462 2.388735 TCGTAGTTGATGGCTCCTCAT 58.611 47.619 0.00 0.00 0.00 2.90
462 463 1.847328 TCGTAGTTGATGGCTCCTCA 58.153 50.000 0.00 0.00 0.00 3.86
463 464 2.482142 CCTTCGTAGTTGATGGCTCCTC 60.482 54.545 0.00 0.00 0.00 3.71
464 465 1.482593 CCTTCGTAGTTGATGGCTCCT 59.517 52.381 0.00 0.00 0.00 3.69
465 466 1.473434 CCCTTCGTAGTTGATGGCTCC 60.473 57.143 0.00 0.00 33.09 4.70
466 467 1.480954 TCCCTTCGTAGTTGATGGCTC 59.519 52.381 0.00 0.00 33.09 4.70
467 468 1.568504 TCCCTTCGTAGTTGATGGCT 58.431 50.000 0.00 0.00 33.09 4.75
468 469 2.213499 CATCCCTTCGTAGTTGATGGC 58.787 52.381 9.54 0.00 33.09 4.40
469 470 2.213499 GCATCCCTTCGTAGTTGATGG 58.787 52.381 15.64 0.00 33.04 3.51
470 471 2.905075 TGCATCCCTTCGTAGTTGATG 58.095 47.619 11.86 11.86 34.40 3.07
471 472 3.118261 ACATGCATCCCTTCGTAGTTGAT 60.118 43.478 0.00 0.00 0.00 2.57
472 473 2.236146 ACATGCATCCCTTCGTAGTTGA 59.764 45.455 0.00 0.00 0.00 3.18
473 474 2.632377 ACATGCATCCCTTCGTAGTTG 58.368 47.619 0.00 0.00 0.00 3.16
474 475 3.350219 AACATGCATCCCTTCGTAGTT 57.650 42.857 0.00 0.00 0.00 2.24
475 476 3.350219 AAACATGCATCCCTTCGTAGT 57.650 42.857 0.00 0.00 0.00 2.73
476 477 3.689161 TCAAAACATGCATCCCTTCGTAG 59.311 43.478 0.00 0.00 0.00 3.51
477 478 3.680490 TCAAAACATGCATCCCTTCGTA 58.320 40.909 0.00 0.00 0.00 3.43
478 479 2.513753 TCAAAACATGCATCCCTTCGT 58.486 42.857 0.00 0.00 0.00 3.85
479 480 3.574284 TTCAAAACATGCATCCCTTCG 57.426 42.857 0.00 0.00 0.00 3.79
480 481 5.055812 TGTTTTCAAAACATGCATCCCTTC 58.944 37.500 11.83 0.00 0.00 3.46
481 482 5.033589 TGTTTTCAAAACATGCATCCCTT 57.966 34.783 11.83 0.00 0.00 3.95
482 483 4.686191 TGTTTTCAAAACATGCATCCCT 57.314 36.364 11.83 0.00 0.00 4.20
483 484 5.747951 TTTGTTTTCAAAACATGCATCCC 57.252 34.783 16.41 0.00 45.30 3.85
495 496 7.009083 CACTTCATTGTCGTCATTTGTTTTCAA 59.991 33.333 0.00 0.00 38.10 2.69
496 497 6.471841 CACTTCATTGTCGTCATTTGTTTTCA 59.528 34.615 0.00 0.00 0.00 2.69
497 498 6.472163 ACACTTCATTGTCGTCATTTGTTTTC 59.528 34.615 0.00 0.00 0.00 2.29
498 499 6.329496 ACACTTCATTGTCGTCATTTGTTTT 58.671 32.000 0.00 0.00 0.00 2.43
499 500 5.890334 ACACTTCATTGTCGTCATTTGTTT 58.110 33.333 0.00 0.00 0.00 2.83
500 501 5.499139 ACACTTCATTGTCGTCATTTGTT 57.501 34.783 0.00 0.00 0.00 2.83
501 502 5.095691 GACACTTCATTGTCGTCATTTGT 57.904 39.130 0.00 0.00 36.79 2.83
510 511 3.332761 TTGCGTTGACACTTCATTGTC 57.667 42.857 0.00 0.00 45.34 3.18
511 512 3.066621 ACATTGCGTTGACACTTCATTGT 59.933 39.130 0.00 0.00 0.00 2.71
512 513 3.422876 CACATTGCGTTGACACTTCATTG 59.577 43.478 0.00 0.00 0.00 2.82
513 514 3.314913 TCACATTGCGTTGACACTTCATT 59.685 39.130 0.00 0.00 0.00 2.57
514 515 2.877786 TCACATTGCGTTGACACTTCAT 59.122 40.909 0.00 0.00 0.00 2.57
515 516 2.284190 TCACATTGCGTTGACACTTCA 58.716 42.857 0.00 0.00 0.00 3.02
516 517 3.332761 TTCACATTGCGTTGACACTTC 57.667 42.857 0.00 0.00 0.00 3.01
517 518 3.314913 TCATTCACATTGCGTTGACACTT 59.685 39.130 0.00 0.00 0.00 3.16
518 519 2.877786 TCATTCACATTGCGTTGACACT 59.122 40.909 0.00 0.00 0.00 3.55
519 520 3.266541 TCATTCACATTGCGTTGACAC 57.733 42.857 0.00 0.00 0.00 3.67
520 521 3.119884 GGATCATTCACATTGCGTTGACA 60.120 43.478 0.00 0.00 0.00 3.58
521 522 3.127548 AGGATCATTCACATTGCGTTGAC 59.872 43.478 0.00 0.00 0.00 3.18
522 523 3.346315 AGGATCATTCACATTGCGTTGA 58.654 40.909 0.00 0.00 0.00 3.18
523 524 3.770263 AGGATCATTCACATTGCGTTG 57.230 42.857 0.00 0.00 0.00 4.10
524 525 5.125356 TCATAGGATCATTCACATTGCGTT 58.875 37.500 0.00 0.00 0.00 4.84
525 526 4.707105 TCATAGGATCATTCACATTGCGT 58.293 39.130 0.00 0.00 0.00 5.24
526 527 5.467735 TCTTCATAGGATCATTCACATTGCG 59.532 40.000 0.00 0.00 0.00 4.85
527 528 6.872628 TCTTCATAGGATCATTCACATTGC 57.127 37.500 0.00 0.00 0.00 3.56
528 529 7.808381 GCATTCTTCATAGGATCATTCACATTG 59.192 37.037 0.00 0.00 0.00 2.82
529 530 7.504574 TGCATTCTTCATAGGATCATTCACATT 59.495 33.333 0.00 0.00 0.00 2.71
530 531 7.002276 TGCATTCTTCATAGGATCATTCACAT 58.998 34.615 0.00 0.00 0.00 3.21
531 532 6.358991 TGCATTCTTCATAGGATCATTCACA 58.641 36.000 0.00 0.00 0.00 3.58
532 533 6.872628 TGCATTCTTCATAGGATCATTCAC 57.127 37.500 0.00 0.00 0.00 3.18
533 534 6.829811 TGTTGCATTCTTCATAGGATCATTCA 59.170 34.615 0.00 0.00 0.00 2.57
534 535 7.268199 TGTTGCATTCTTCATAGGATCATTC 57.732 36.000 0.00 0.00 0.00 2.67
535 536 7.649533 TTGTTGCATTCTTCATAGGATCATT 57.350 32.000 0.00 0.00 0.00 2.57
536 537 7.123098 TGTTTGTTGCATTCTTCATAGGATCAT 59.877 33.333 0.00 0.00 0.00 2.45
537 538 6.433716 TGTTTGTTGCATTCTTCATAGGATCA 59.566 34.615 0.00 0.00 0.00 2.92
538 539 6.855836 TGTTTGTTGCATTCTTCATAGGATC 58.144 36.000 0.00 0.00 0.00 3.36
539 540 6.839124 TGTTTGTTGCATTCTTCATAGGAT 57.161 33.333 0.00 0.00 0.00 3.24
540 541 6.647334 TTGTTTGTTGCATTCTTCATAGGA 57.353 33.333 0.00 0.00 0.00 2.94
541 542 7.894376 ATTTGTTTGTTGCATTCTTCATAGG 57.106 32.000 0.00 0.00 0.00 2.57
543 544 9.421806 CCTTATTTGTTTGTTGCATTCTTCATA 57.578 29.630 0.00 0.00 0.00 2.15
544 545 7.388500 CCCTTATTTGTTTGTTGCATTCTTCAT 59.612 33.333 0.00 0.00 0.00 2.57
545 546 6.705381 CCCTTATTTGTTTGTTGCATTCTTCA 59.295 34.615 0.00 0.00 0.00 3.02
546 547 6.705825 ACCCTTATTTGTTTGTTGCATTCTTC 59.294 34.615 0.00 0.00 0.00 2.87
547 548 6.591001 ACCCTTATTTGTTTGTTGCATTCTT 58.409 32.000 0.00 0.00 0.00 2.52
548 549 6.173427 ACCCTTATTTGTTTGTTGCATTCT 57.827 33.333 0.00 0.00 0.00 2.40
549 550 6.859420 AACCCTTATTTGTTTGTTGCATTC 57.141 33.333 0.00 0.00 0.00 2.67
550 551 8.916628 ATTAACCCTTATTTGTTTGTTGCATT 57.083 26.923 0.00 0.00 0.00 3.56
551 552 8.916628 AATTAACCCTTATTTGTTTGTTGCAT 57.083 26.923 0.00 0.00 0.00 3.96
585 586 2.290323 GCAGATGAACACCACTAAGGGT 60.290 50.000 0.00 0.00 43.89 4.34
599 600 0.518636 GCGCAAAACTGAGCAGATGA 59.481 50.000 0.30 0.00 34.74 2.92
740 741 2.689983 CTGAATAAAATTGGCCGCCTCT 59.310 45.455 11.61 0.00 0.00 3.69
850 853 4.293648 CTGTCGCCGTGGTCACCA 62.294 66.667 0.00 0.00 0.00 4.17
910 913 2.283966 ACAGCTAGCTCCCACCGT 60.284 61.111 16.15 5.72 0.00 4.83
1148 1154 0.830648 TCTTACCCCATTCTCGCTGG 59.169 55.000 0.00 0.00 0.00 4.85
1227 1233 1.881324 CATGTCACCTGCATGAACACA 59.119 47.619 0.00 0.00 44.60 3.72
1269 1275 3.634397 TTTATCAGAGTCTTGGCCAGG 57.366 47.619 8.96 8.96 0.00 4.45
1299 1305 2.743664 CAACCATTCGTCATGCTCTTCA 59.256 45.455 0.00 0.00 0.00 3.02
1509 1515 4.991153 TTTCAACATTACAACCAGTGCA 57.009 36.364 0.00 0.00 0.00 4.57
1542 1548 6.795144 ACAAATTCCTCCATAATTCATGCA 57.205 33.333 0.00 0.00 32.84 3.96
1670 1680 9.978044 CTGAATTCTTCATTTCTTCTCCTTTTT 57.022 29.630 7.05 0.00 39.30 1.94
1671 1681 9.359653 TCTGAATTCTTCATTTCTTCTCCTTTT 57.640 29.630 7.05 0.00 39.30 2.27
1736 1746 6.584185 TTCTAACCTTAATTGTTTGGCTCC 57.416 37.500 0.00 0.00 0.00 4.70
2133 2147 2.003658 AAACCACGTGGCAGTGCAAG 62.004 55.000 34.26 7.83 40.59 4.01
2309 2325 7.468141 AATTTCTTCCCTAAACCAAGTCATC 57.532 36.000 0.00 0.00 0.00 2.92
2440 2456 2.797074 TGTTTCGTCATGTGTCCGTA 57.203 45.000 0.00 0.00 0.00 4.02
2508 2524 3.636300 AGGAGGAGATCAAGATGAAGACG 59.364 47.826 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.