Multiple sequence alignment - TraesCS1B01G102800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G102800 chr1B 100.000 3679 0 0 1 3679 112867156 112863478 0.000000e+00 6794.0
1 TraesCS1B01G102800 chr1B 76.690 1686 299 58 986 2615 113516762 113515115 0.000000e+00 850.0
2 TraesCS1B01G102800 chr1B 78.438 1178 211 31 1106 2251 113026279 113025113 0.000000e+00 728.0
3 TraesCS1B01G102800 chr1B 95.410 305 12 2 471 774 592409009 592409312 5.520000e-133 484.0
4 TraesCS1B01G102800 chr1B 91.419 303 23 3 452 752 58567878 58568179 2.640000e-111 412.0
5 TraesCS1B01G102800 chr1B 74.194 1147 213 58 1164 2251 50992406 50993528 5.720000e-108 401.0
6 TraesCS1B01G102800 chr1B 94.118 102 4 2 3481 3581 400582799 400582699 1.770000e-33 154.0
7 TraesCS1B01G102800 chr1B 94.898 98 4 1 3486 3583 343660962 343660866 6.360000e-33 152.0
8 TraesCS1B01G102800 chr1B 97.500 40 1 0 871 910 113214409 113214370 6.590000e-08 69.4
9 TraesCS1B01G102800 chr1B 97.500 40 1 0 871 910 113316526 113316487 6.590000e-08 69.4
10 TraesCS1B01G102800 chr1B 97.500 40 1 0 871 910 113409303 113409264 6.590000e-08 69.4
11 TraesCS1B01G102800 chr1B 97.500 40 1 0 871 910 113499314 113499275 6.590000e-08 69.4
12 TraesCS1B01G102800 chr1A 93.798 2596 94 8 939 3499 71725183 71722620 0.000000e+00 3840.0
13 TraesCS1B01G102800 chr1A 95.130 308 12 3 471 776 516695215 516695521 1.990000e-132 483.0
14 TraesCS1B01G102800 chr1A 74.691 1134 214 56 1169 2251 32191068 32192179 1.570000e-118 436.0
15 TraesCS1B01G102800 chr1A 85.608 403 52 5 7 406 71727456 71727057 5.680000e-113 418.0
16 TraesCS1B01G102800 chr1A 86.765 340 34 8 448 780 223458345 223458680 5.800000e-98 368.0
17 TraesCS1B01G102800 chr1A 89.944 179 17 1 776 954 71725379 71725202 2.860000e-56 230.0
18 TraesCS1B01G102800 chr1A 93.396 106 6 1 3481 3586 108383096 108382992 4.920000e-34 156.0
19 TraesCS1B01G102800 chr1A 84.404 109 14 2 7 115 101268992 101268887 1.810000e-18 104.0
20 TraesCS1B01G102800 chr1A 92.647 68 3 2 406 471 71725433 71725366 3.020000e-16 97.1
21 TraesCS1B01G102800 chr1D 93.363 1582 55 8 989 2551 71639896 71638346 0.000000e+00 2294.0
22 TraesCS1B01G102800 chr1D 78.754 1172 202 32 1107 2251 71770008 71768857 0.000000e+00 741.0
23 TraesCS1B01G102800 chr1D 93.011 186 11 2 287 471 71640357 71640173 1.680000e-68 270.0
24 TraesCS1B01G102800 chr1D 91.964 112 6 3 3492 3603 447863808 447863700 1.770000e-33 154.0
25 TraesCS1B01G102800 chr1D 94.059 101 3 1 871 971 71640061 71639964 2.290000e-32 150.0
26 TraesCS1B01G102800 chr1D 90.090 111 9 1 775 883 71640187 71640077 3.830000e-30 143.0
27 TraesCS1B01G102800 chr5B 79.592 1960 282 56 1172 3084 631391825 631389937 0.000000e+00 1295.0
28 TraesCS1B01G102800 chr5B 80.638 1410 196 35 1172 2554 626251027 626249668 0.000000e+00 1020.0
29 TraesCS1B01G102800 chr5B 95.410 305 13 1 471 774 616440214 616440518 5.520000e-133 484.0
30 TraesCS1B01G102800 chr5B 77.778 576 86 24 2535 3095 626249657 626249109 2.130000e-82 316.0
31 TraesCS1B01G102800 chr5A 82.358 1094 167 16 1172 2246 631277192 631276106 0.000000e+00 928.0
32 TraesCS1B01G102800 chr5A 95.469 309 13 1 471 778 683947277 683946969 3.300000e-135 492.0
33 TraesCS1B01G102800 chr5A 74.568 983 200 38 1045 2000 451222706 451221747 5.760000e-103 385.0
34 TraesCS1B01G102800 chr5A 78.356 365 50 15 2547 2902 631268010 631267666 3.720000e-50 209.0
35 TraesCS1B01G102800 chr3B 95.410 305 13 1 471 774 160630669 160630365 5.520000e-133 484.0
36 TraesCS1B01G102800 chr3B 95.410 305 13 1 471 774 606376354 606376050 5.520000e-133 484.0
37 TraesCS1B01G102800 chr3B 89.623 318 28 5 459 774 816705740 816706054 2.060000e-107 399.0
38 TraesCS1B01G102800 chr2D 94.839 310 14 2 467 774 591307409 591307100 1.990000e-132 483.0
39 TraesCS1B01G102800 chr2D 87.879 99 12 0 4 102 157035037 157035135 2.320000e-22 117.0
40 TraesCS1B01G102800 chr2D 85.859 99 14 0 4 102 517893656 517893754 5.020000e-19 106.0
41 TraesCS1B01G102800 chr2B 94.304 316 16 2 460 774 763068248 763068562 1.990000e-132 483.0
42 TraesCS1B01G102800 chr2B 91.961 311 24 1 469 778 703348599 703348289 5.640000e-118 435.0
43 TraesCS1B01G102800 chr2B 83.962 106 16 1 7 112 87117822 87117718 2.340000e-17 100.0
44 TraesCS1B01G102800 chr6B 94.551 312 16 1 470 780 551769914 551770225 7.150000e-132 481.0
45 TraesCS1B01G102800 chr6B 96.040 101 2 2 3485 3584 252820952 252820853 2.940000e-36 163.0
46 TraesCS1B01G102800 chr6B 73.143 525 104 28 2105 2617 145575230 145574731 1.770000e-33 154.0
47 TraesCS1B01G102800 chr4B 94.137 307 17 1 470 775 549177299 549177605 2.000000e-127 466.0
48 TraesCS1B01G102800 chr4A 90.184 326 29 3 460 783 631371402 631371726 4.390000e-114 422.0
49 TraesCS1B01G102800 chr4A 88.119 101 12 0 7 107 732437259 732437359 1.790000e-23 121.0
50 TraesCS1B01G102800 chr2A 84.839 310 39 8 459 765 455480956 455480652 4.620000e-79 305.0
51 TraesCS1B01G102800 chr3D 87.361 269 28 6 448 711 605976629 605976362 1.660000e-78 303.0
52 TraesCS1B01G102800 chr3D 88.776 98 10 1 7 104 31443979 31443883 6.450000e-23 119.0
53 TraesCS1B01G102800 chr7B 96.078 102 2 2 3488 3589 713378767 713378866 8.170000e-37 165.0
54 TraesCS1B01G102800 chr7B 85.859 99 12 2 14 112 14208410 14208506 1.810000e-18 104.0
55 TraesCS1B01G102800 chr7A 96.939 98 1 1 3496 3593 122181596 122181501 2.940000e-36 163.0
56 TraesCS1B01G102800 chr6D 79.741 232 39 7 1169 1396 71053201 71052974 1.060000e-35 161.0
57 TraesCS1B01G102800 chr3A 97.849 93 2 0 3491 3583 516801722 516801814 1.060000e-35 161.0
58 TraesCS1B01G102800 chr7D 95.876 97 4 0 3496 3592 195280136 195280232 1.370000e-34 158.0
59 TraesCS1B01G102800 chr7D 89.286 84 9 0 22 105 9096479 9096396 5.020000e-19 106.0
60 TraesCS1B01G102800 chr5D 90.625 96 9 0 7 102 262843198 262843103 1.070000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G102800 chr1B 112863478 112867156 3678 True 6794.000 6794 100.00000 1 3679 1 chr1B.!!$R1 3678
1 TraesCS1B01G102800 chr1B 113515115 113516762 1647 True 850.000 850 76.69000 986 2615 1 chr1B.!!$R7 1629
2 TraesCS1B01G102800 chr1B 113025113 113026279 1166 True 728.000 728 78.43800 1106 2251 1 chr1B.!!$R2 1145
3 TraesCS1B01G102800 chr1B 50992406 50993528 1122 False 401.000 401 74.19400 1164 2251 1 chr1B.!!$F1 1087
4 TraesCS1B01G102800 chr1A 71722620 71727456 4836 True 1146.275 3840 90.49925 7 3499 4 chr1A.!!$R3 3492
5 TraesCS1B01G102800 chr1A 32191068 32192179 1111 False 436.000 436 74.69100 1169 2251 1 chr1A.!!$F1 1082
6 TraesCS1B01G102800 chr1D 71768857 71770008 1151 True 741.000 741 78.75400 1107 2251 1 chr1D.!!$R1 1144
7 TraesCS1B01G102800 chr1D 71638346 71640357 2011 True 714.250 2294 92.63075 287 2551 4 chr1D.!!$R3 2264
8 TraesCS1B01G102800 chr5B 631389937 631391825 1888 True 1295.000 1295 79.59200 1172 3084 1 chr5B.!!$R1 1912
9 TraesCS1B01G102800 chr5B 626249109 626251027 1918 True 668.000 1020 79.20800 1172 3095 2 chr5B.!!$R2 1923
10 TraesCS1B01G102800 chr5A 631276106 631277192 1086 True 928.000 928 82.35800 1172 2246 1 chr5A.!!$R3 1074
11 TraesCS1B01G102800 chr5A 451221747 451222706 959 True 385.000 385 74.56800 1045 2000 1 chr5A.!!$R1 955

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 2169 0.036765 TCACCCCTATGAACGCACAC 60.037 55.0 0.00 0.0 0.00 3.82 F
584 2212 0.038159 ACTTCCGAAAGACTGAGCCG 60.038 55.0 0.00 0.0 36.30 5.52 F
662 2290 0.038744 CCCTCCCACTGAAAGCACAT 59.961 55.0 0.00 0.0 37.60 3.21 F
733 2361 0.047176 ACCCTGGTGGATTGGGGATA 59.953 55.0 3.72 0.0 44.97 2.59 F
734 2362 0.478507 CCCTGGTGGATTGGGGATAC 59.521 60.0 0.00 0.0 41.25 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1447 3191 0.735471 CAGTTCTCGATCTGAGCGGA 59.265 55.000 15.80 8.76 44.86 5.54 R
2256 4078 4.019411 TCCAACAGATTATTGTCTCTGCCA 60.019 41.667 0.00 0.00 42.12 4.92 R
2597 4460 0.817013 TGAATTCCAATTGAGCGCCC 59.183 50.000 7.12 0.00 0.00 6.13 R
2632 4495 1.002624 TGGGCATCCAAAGACGACC 60.003 57.895 0.00 0.00 40.73 4.79 R
2732 4595 6.115446 GGATGAGTCACAGATAAACCATTGA 58.885 40.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.971695 GGGCCTCCACTTTTGTCCG 60.972 63.158 0.84 0.00 0.00 4.79
52 53 2.589442 ACTTTTGTCCGCGCCGAA 60.589 55.556 0.00 0.00 0.00 4.30
53 54 2.127383 CTTTTGTCCGCGCCGAAC 60.127 61.111 0.00 0.00 0.00 3.95
58 59 4.379143 GTCCGCGCCGAACCAAAC 62.379 66.667 0.00 0.00 0.00 2.93
62 63 2.559330 GCGCCGAACCAAACGAAT 59.441 55.556 0.00 0.00 0.00 3.34
64 65 1.154301 CGCCGAACCAAACGAATGG 60.154 57.895 9.24 9.24 46.38 3.16
73 74 0.515564 CAAACGAATGGTGACGGACC 59.484 55.000 0.00 0.00 46.37 4.46
100 101 0.320421 TACCTGCGTTGGAGTTGCTC 60.320 55.000 2.95 0.00 0.00 4.26
102 103 1.572085 CCTGCGTTGGAGTTGCTCTG 61.572 60.000 0.00 0.00 0.00 3.35
150 151 1.067212 CGGGTATTGGAGAGGAGAACG 59.933 57.143 0.00 0.00 0.00 3.95
156 157 0.820226 TGGAGAGGAGAACGCAGATG 59.180 55.000 0.00 0.00 0.00 2.90
157 158 0.529555 GGAGAGGAGAACGCAGATGC 60.530 60.000 0.00 0.00 37.78 3.91
164 165 2.031919 AACGCAGATGCCGTGGAA 59.968 55.556 0.00 0.00 37.91 3.53
167 168 2.825836 GCAGATGCCGTGGAAGGG 60.826 66.667 0.00 0.00 46.87 3.95
188 189 2.739932 GCATGTGGCGTCATCTAGAAGT 60.740 50.000 0.00 0.00 0.00 3.01
191 192 0.824109 TGGCGTCATCTAGAAGTGGG 59.176 55.000 0.00 0.00 0.00 4.61
212 213 3.670377 GCACGGGACAGGGTTTGC 61.670 66.667 0.00 0.00 0.00 3.68
228 229 1.872388 TTGCAGCTAGTACGCACAAA 58.128 45.000 0.00 0.00 34.87 2.83
229 230 1.872388 TGCAGCTAGTACGCACAAAA 58.128 45.000 0.00 0.00 0.00 2.44
230 231 2.214347 TGCAGCTAGTACGCACAAAAA 58.786 42.857 0.00 0.00 0.00 1.94
231 232 2.223144 TGCAGCTAGTACGCACAAAAAG 59.777 45.455 0.00 0.00 0.00 2.27
232 233 2.478894 GCAGCTAGTACGCACAAAAAGA 59.521 45.455 0.00 0.00 0.00 2.52
235 236 5.082059 CAGCTAGTACGCACAAAAAGATTG 58.918 41.667 0.00 0.00 0.00 2.67
236 237 3.846335 GCTAGTACGCACAAAAAGATTGC 59.154 43.478 0.00 0.00 0.00 3.56
238 239 4.300189 AGTACGCACAAAAAGATTGCAA 57.700 36.364 0.00 0.00 35.93 4.08
242 243 4.896080 ACGCACAAAAAGATTGCAAAAAG 58.104 34.783 1.71 0.00 35.93 2.27
243 244 4.391523 ACGCACAAAAAGATTGCAAAAAGT 59.608 33.333 1.71 0.00 35.93 2.66
272 274 7.948357 AGATGCAATAATACAAGCACAATCAT 58.052 30.769 0.00 0.00 40.14 2.45
334 337 2.610374 TCACGCAGTTTTGGTAACACTC 59.390 45.455 0.00 0.00 46.69 3.51
497 2125 7.561021 TTTTTAAGCATCAGTACAGACACAA 57.439 32.000 0.00 0.00 0.00 3.33
498 2126 6.785488 TTTAAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
499 2127 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
500 2128 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
501 2129 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
502 2130 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
503 2131 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
504 2132 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
505 2133 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
506 2134 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
507 2135 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
508 2136 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
509 2137 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
510 2138 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
511 2139 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
512 2140 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
516 2144 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
517 2145 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
518 2146 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
519 2147 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
520 2148 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
521 2149 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
522 2150 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
523 2151 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
524 2152 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
525 2153 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
526 2154 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
527 2155 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
528 2156 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
529 2157 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
530 2158 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
531 2159 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
532 2160 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
533 2161 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
534 2162 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
535 2163 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
536 2164 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
537 2165 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
538 2166 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
539 2167 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
540 2168 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
541 2169 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
542 2170 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
543 2171 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
544 2172 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
545 2173 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
546 2174 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
547 2175 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
548 2176 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
549 2177 1.506309 ATGAACGCACACACGCACAT 61.506 50.000 0.00 0.00 36.19 3.21
550 2178 1.438710 GAACGCACACACGCACATC 60.439 57.895 0.00 0.00 36.19 3.06
551 2179 2.764251 GAACGCACACACGCACATCC 62.764 60.000 0.00 0.00 36.19 3.51
552 2180 3.043713 CGCACACACGCACATCCT 61.044 61.111 0.00 0.00 0.00 3.24
553 2181 1.736282 CGCACACACGCACATCCTA 60.736 57.895 0.00 0.00 0.00 2.94
554 2182 1.787847 GCACACACGCACATCCTAC 59.212 57.895 0.00 0.00 0.00 3.18
555 2183 1.635663 GCACACACGCACATCCTACC 61.636 60.000 0.00 0.00 0.00 3.18
556 2184 1.019278 CACACACGCACATCCTACCC 61.019 60.000 0.00 0.00 0.00 3.69
557 2185 1.449601 CACACGCACATCCTACCCC 60.450 63.158 0.00 0.00 0.00 4.95
558 2186 1.612442 ACACGCACATCCTACCCCT 60.612 57.895 0.00 0.00 0.00 4.79
559 2187 0.324923 ACACGCACATCCTACCCCTA 60.325 55.000 0.00 0.00 0.00 3.53
560 2188 1.048601 CACGCACATCCTACCCCTAT 58.951 55.000 0.00 0.00 0.00 2.57
561 2189 1.048601 ACGCACATCCTACCCCTATG 58.951 55.000 0.00 0.00 0.00 2.23
562 2190 1.338107 CGCACATCCTACCCCTATGA 58.662 55.000 0.00 0.00 0.00 2.15
563 2191 1.273606 CGCACATCCTACCCCTATGAG 59.726 57.143 0.00 0.00 0.00 2.90
564 2192 1.002544 GCACATCCTACCCCTATGAGC 59.997 57.143 0.00 0.00 31.75 4.26
565 2193 2.329267 CACATCCTACCCCTATGAGCA 58.671 52.381 0.00 0.00 0.00 4.26
566 2194 2.037772 CACATCCTACCCCTATGAGCAC 59.962 54.545 0.00 0.00 0.00 4.40
567 2195 2.090494 ACATCCTACCCCTATGAGCACT 60.090 50.000 0.00 0.00 0.00 4.40
568 2196 2.868964 TCCTACCCCTATGAGCACTT 57.131 50.000 0.00 0.00 0.00 3.16
569 2197 2.679082 TCCTACCCCTATGAGCACTTC 58.321 52.381 0.00 0.00 0.00 3.01
570 2198 1.694696 CCTACCCCTATGAGCACTTCC 59.305 57.143 0.00 0.00 0.00 3.46
571 2199 1.341531 CTACCCCTATGAGCACTTCCG 59.658 57.143 0.00 0.00 0.00 4.30
572 2200 0.325296 ACCCCTATGAGCACTTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
573 2201 0.830648 CCCCTATGAGCACTTCCGAA 59.169 55.000 0.00 0.00 0.00 4.30
574 2202 1.209504 CCCCTATGAGCACTTCCGAAA 59.790 52.381 0.00 0.00 0.00 3.46
575 2203 2.555199 CCCTATGAGCACTTCCGAAAG 58.445 52.381 0.00 0.00 38.54 2.62
576 2204 2.168521 CCCTATGAGCACTTCCGAAAGA 59.831 50.000 0.00 0.00 36.30 2.52
577 2205 3.190874 CCTATGAGCACTTCCGAAAGAC 58.809 50.000 0.00 0.00 36.30 3.01
578 2206 3.118956 CCTATGAGCACTTCCGAAAGACT 60.119 47.826 0.00 0.00 36.30 3.24
579 2207 2.154854 TGAGCACTTCCGAAAGACTG 57.845 50.000 0.00 0.00 36.30 3.51
580 2208 1.686587 TGAGCACTTCCGAAAGACTGA 59.313 47.619 0.00 0.00 36.30 3.41
581 2209 2.288457 TGAGCACTTCCGAAAGACTGAG 60.288 50.000 0.00 0.00 36.30 3.35
582 2210 0.793250 GCACTTCCGAAAGACTGAGC 59.207 55.000 0.00 0.00 36.30 4.26
583 2211 1.433534 CACTTCCGAAAGACTGAGCC 58.566 55.000 0.00 0.00 36.30 4.70
584 2212 0.038159 ACTTCCGAAAGACTGAGCCG 60.038 55.000 0.00 0.00 36.30 5.52
585 2213 0.737715 CTTCCGAAAGACTGAGCCGG 60.738 60.000 0.00 0.00 41.36 6.13
586 2214 2.781595 TTCCGAAAGACTGAGCCGGC 62.782 60.000 21.89 21.89 39.96 6.13
587 2215 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
588 2216 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
589 2217 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
590 2218 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
591 2219 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
592 2220 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
593 2221 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
594 2222 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
595 2223 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
596 2224 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
597 2225 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
598 2226 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
599 2227 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
600 2228 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
601 2229 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
602 2230 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
603 2231 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
604 2232 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
605 2233 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
606 2234 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
607 2235 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
608 2236 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
609 2237 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
610 2238 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
611 2239 7.623089 GCATATCATCTTGAGATTTACGAAGCC 60.623 40.741 0.00 0.00 31.21 4.35
612 2240 5.084818 TCATCTTGAGATTTACGAAGCCA 57.915 39.130 0.00 0.00 31.21 4.75
613 2241 4.870426 TCATCTTGAGATTTACGAAGCCAC 59.130 41.667 0.00 0.00 31.21 5.01
614 2242 3.250744 TCTTGAGATTTACGAAGCCACG 58.749 45.455 0.00 0.00 39.31 4.94
615 2243 6.638968 CATCTTGAGATTTACGAAGCCACGT 61.639 44.000 10.37 10.37 40.18 4.49
616 2244 3.853831 TGAGATTTACGAAGCCACGTA 57.146 42.857 8.54 8.54 44.72 3.57
617 2245 3.766151 TGAGATTTACGAAGCCACGTAG 58.234 45.455 11.59 0.00 46.60 3.51
618 2246 3.114065 GAGATTTACGAAGCCACGTAGG 58.886 50.000 11.59 0.00 46.60 3.18
627 2255 2.813908 CCACGTAGGCGCCTTGTC 60.814 66.667 37.74 23.18 42.83 3.18
628 2256 3.179265 CACGTAGGCGCCTTGTCG 61.179 66.667 37.74 33.65 42.83 4.35
629 2257 3.677648 ACGTAGGCGCCTTGTCGT 61.678 61.111 37.74 34.28 42.83 4.34
630 2258 2.879462 CGTAGGCGCCTTGTCGTC 60.879 66.667 37.74 16.43 0.00 4.20
631 2259 2.879462 GTAGGCGCCTTGTCGTCG 60.879 66.667 37.74 0.00 39.34 5.12
632 2260 3.057548 TAGGCGCCTTGTCGTCGA 61.058 61.111 37.74 11.48 39.34 4.20
633 2261 3.332493 TAGGCGCCTTGTCGTCGAC 62.332 63.158 37.74 18.51 39.34 4.20
637 2265 4.047059 GCCTTGTCGTCGACGGGA 62.047 66.667 35.05 20.33 40.29 5.14
638 2266 2.646719 CCTTGTCGTCGACGGGAA 59.353 61.111 35.05 25.26 40.29 3.97
639 2267 1.731969 CCTTGTCGTCGACGGGAAC 60.732 63.158 35.05 26.09 40.29 3.62
652 2280 2.606826 GGAACGTCCCCTCCCACT 60.607 66.667 0.00 0.00 0.00 4.00
653 2281 2.663196 GAACGTCCCCTCCCACTG 59.337 66.667 0.00 0.00 0.00 3.66
654 2282 1.911766 GAACGTCCCCTCCCACTGA 60.912 63.158 0.00 0.00 0.00 3.41
655 2283 1.460689 AACGTCCCCTCCCACTGAA 60.461 57.895 0.00 0.00 0.00 3.02
656 2284 1.057851 AACGTCCCCTCCCACTGAAA 61.058 55.000 0.00 0.00 0.00 2.69
657 2285 1.296715 CGTCCCCTCCCACTGAAAG 59.703 63.158 0.00 0.00 42.29 2.62
658 2286 1.002011 GTCCCCTCCCACTGAAAGC 60.002 63.158 0.00 0.00 37.60 3.51
659 2287 1.463214 TCCCCTCCCACTGAAAGCA 60.463 57.895 0.00 0.00 37.60 3.91
660 2288 1.303643 CCCCTCCCACTGAAAGCAC 60.304 63.158 0.00 0.00 37.60 4.40
661 2289 1.455849 CCCTCCCACTGAAAGCACA 59.544 57.895 0.00 0.00 37.60 4.57
662 2290 0.038744 CCCTCCCACTGAAAGCACAT 59.961 55.000 0.00 0.00 37.60 3.21
663 2291 1.457346 CCTCCCACTGAAAGCACATC 58.543 55.000 0.00 0.00 37.60 3.06
664 2292 1.081892 CTCCCACTGAAAGCACATCG 58.918 55.000 0.00 0.00 37.60 3.84
665 2293 0.955428 TCCCACTGAAAGCACATCGC 60.955 55.000 0.00 0.00 37.60 4.58
666 2294 1.503542 CCACTGAAAGCACATCGCC 59.496 57.895 0.00 0.00 44.04 5.54
667 2295 1.133253 CACTGAAAGCACATCGCCG 59.867 57.895 0.00 0.00 44.04 6.46
668 2296 2.034879 ACTGAAAGCACATCGCCGG 61.035 57.895 0.00 0.00 44.04 6.13
669 2297 1.741401 CTGAAAGCACATCGCCGGA 60.741 57.895 5.05 0.00 44.04 5.14
670 2298 1.298157 CTGAAAGCACATCGCCGGAA 61.298 55.000 5.05 0.00 44.04 4.30
671 2299 0.886938 TGAAAGCACATCGCCGGAAA 60.887 50.000 5.05 0.00 44.04 3.13
672 2300 0.451783 GAAAGCACATCGCCGGAAAT 59.548 50.000 5.05 0.00 44.04 2.17
673 2301 0.451783 AAAGCACATCGCCGGAAATC 59.548 50.000 5.05 0.00 44.04 2.17
674 2302 1.376609 AAGCACATCGCCGGAAATCC 61.377 55.000 5.05 0.00 44.04 3.01
675 2303 1.819632 GCACATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 32.94 3.24
676 2304 2.016961 CACATCGCCGGAAATCCTG 58.983 57.895 5.05 0.00 0.00 3.86
677 2305 0.461870 CACATCGCCGGAAATCCTGA 60.462 55.000 5.05 0.00 0.00 3.86
678 2306 0.251916 ACATCGCCGGAAATCCTGAA 59.748 50.000 5.05 0.00 0.00 3.02
679 2307 1.339631 ACATCGCCGGAAATCCTGAAA 60.340 47.619 5.05 0.00 0.00 2.69
680 2308 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
681 2309 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
682 2310 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
683 2311 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
684 2312 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
685 2313 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
686 2314 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
687 2315 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
688 2316 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
689 2317 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
699 2327 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
700 2328 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
701 2329 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
702 2330 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
703 2331 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
704 2332 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
705 2333 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
706 2334 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
707 2335 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
708 2336 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
709 2337 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
710 2338 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
711 2339 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
712 2340 2.418368 AATGCGAGCACCAGGATTTA 57.582 45.000 0.00 0.00 0.00 1.40
713 2341 2.418368 ATGCGAGCACCAGGATTTAA 57.582 45.000 0.00 0.00 0.00 1.52
714 2342 2.192664 TGCGAGCACCAGGATTTAAA 57.807 45.000 0.00 0.00 0.00 1.52
715 2343 1.810151 TGCGAGCACCAGGATTTAAAC 59.190 47.619 0.00 0.00 0.00 2.01
716 2344 1.132453 GCGAGCACCAGGATTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
717 2345 1.743394 CGAGCACCAGGATTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
718 2346 2.618045 CGAGCACCAGGATTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
724 2352 3.449746 CAGGATTTAAACCCTGGTGGA 57.550 47.619 19.79 0.00 44.68 4.02
725 2353 3.981212 CAGGATTTAAACCCTGGTGGAT 58.019 45.455 19.79 0.00 44.68 3.41
726 2354 4.352893 CAGGATTTAAACCCTGGTGGATT 58.647 43.478 19.79 0.00 44.68 3.01
727 2355 4.160252 CAGGATTTAAACCCTGGTGGATTG 59.840 45.833 19.79 0.00 44.68 2.67
728 2356 3.450817 GGATTTAAACCCTGGTGGATTGG 59.549 47.826 0.00 0.00 38.00 3.16
729 2357 2.614134 TTAAACCCTGGTGGATTGGG 57.386 50.000 0.00 0.00 46.07 4.12
730 2358 0.707616 TAAACCCTGGTGGATTGGGG 59.292 55.000 0.00 0.00 44.97 4.96
731 2359 1.077298 AAACCCTGGTGGATTGGGGA 61.077 55.000 3.72 0.00 44.97 4.81
732 2360 0.855400 AACCCTGGTGGATTGGGGAT 60.855 55.000 3.72 0.00 44.97 3.85
733 2361 0.047176 ACCCTGGTGGATTGGGGATA 59.953 55.000 3.72 0.00 44.97 2.59
734 2362 0.478507 CCCTGGTGGATTGGGGATAC 59.521 60.000 0.00 0.00 41.25 2.24
748 2376 2.871096 GGATACCACTGTCCACCAAA 57.129 50.000 0.00 0.00 34.57 3.28
749 2377 2.433436 GGATACCACTGTCCACCAAAC 58.567 52.381 0.00 0.00 34.57 2.93
750 2378 2.433436 GATACCACTGTCCACCAAACC 58.567 52.381 0.00 0.00 0.00 3.27
751 2379 1.214217 TACCACTGTCCACCAAACCA 58.786 50.000 0.00 0.00 0.00 3.67
752 2380 0.555769 ACCACTGTCCACCAAACCAT 59.444 50.000 0.00 0.00 0.00 3.55
753 2381 1.247567 CCACTGTCCACCAAACCATC 58.752 55.000 0.00 0.00 0.00 3.51
754 2382 1.202927 CCACTGTCCACCAAACCATCT 60.203 52.381 0.00 0.00 0.00 2.90
755 2383 2.154462 CACTGTCCACCAAACCATCTC 58.846 52.381 0.00 0.00 0.00 2.75
756 2384 1.774254 ACTGTCCACCAAACCATCTCA 59.226 47.619 0.00 0.00 0.00 3.27
757 2385 2.174639 ACTGTCCACCAAACCATCTCAA 59.825 45.455 0.00 0.00 0.00 3.02
758 2386 2.554032 CTGTCCACCAAACCATCTCAAC 59.446 50.000 0.00 0.00 0.00 3.18
759 2387 1.886542 GTCCACCAAACCATCTCAACC 59.113 52.381 0.00 0.00 0.00 3.77
760 2388 1.496857 TCCACCAAACCATCTCAACCA 59.503 47.619 0.00 0.00 0.00 3.67
761 2389 1.613437 CCACCAAACCATCTCAACCAC 59.387 52.381 0.00 0.00 0.00 4.16
762 2390 2.305928 CACCAAACCATCTCAACCACA 58.694 47.619 0.00 0.00 0.00 4.17
763 2391 2.294233 CACCAAACCATCTCAACCACAG 59.706 50.000 0.00 0.00 0.00 3.66
764 2392 1.888512 CCAAACCATCTCAACCACAGG 59.111 52.381 0.00 0.00 0.00 4.00
765 2393 2.586425 CAAACCATCTCAACCACAGGT 58.414 47.619 0.00 0.00 37.65 4.00
990 2733 1.077298 ACCCAAATCCCCTGTTCCCA 61.077 55.000 0.00 0.00 0.00 4.37
1086 2829 4.400961 GCACCCAAGAGGCTCGCT 62.401 66.667 9.22 0.00 40.58 4.93
1339 3082 3.470709 CTCTGCTCCAAACAGTTCAAGA 58.529 45.455 0.00 0.00 36.50 3.02
1402 3145 2.356553 CCCGCCGTTTCGTCTTCA 60.357 61.111 0.00 0.00 0.00 3.02
1447 3191 0.893727 AAAAAGGCACGCCGAGGAAT 60.894 50.000 1.61 0.00 41.95 3.01
1854 3636 4.083324 GGAGAATTGTTCATTGAAGACGCA 60.083 41.667 0.00 0.00 0.00 5.24
2005 3799 2.841442 AGTCTTCCAGGTAGCAACAC 57.159 50.000 0.00 0.00 0.00 3.32
2231 4053 8.137210 GAGTATACTCATCCTTGCTTTCTTTC 57.863 38.462 24.97 0.00 42.42 2.62
2354 4184 4.906618 TCCAGTGGGAGAAATACTTGAAC 58.093 43.478 9.92 0.00 38.64 3.18
2396 4226 3.487372 TCAGTATGACCCACTAGATCCG 58.513 50.000 0.00 0.00 42.56 4.18
2597 4460 5.819901 AGAAATGGAAAATAGAGCTTCTCGG 59.180 40.000 0.00 0.00 35.36 4.63
2688 4551 6.033966 GCCGATCCCTTTTAACTGTTATTTG 58.966 40.000 0.37 0.00 0.00 2.32
2732 4595 6.108687 TGACGATCTTTCAGAATAAGCATGT 58.891 36.000 0.00 0.00 0.00 3.21
2752 4615 6.676456 GCATGTCAATGGTTTATCTGTGACTC 60.676 42.308 0.00 0.00 37.02 3.36
2755 4618 6.595326 TGTCAATGGTTTATCTGTGACTCATC 59.405 38.462 0.00 0.00 37.02 2.92
2763 4626 3.616956 TCTGTGACTCATCCCATTGAC 57.383 47.619 0.00 0.00 0.00 3.18
2764 4627 3.176411 TCTGTGACTCATCCCATTGACT 58.824 45.455 0.00 0.00 0.00 3.41
2783 4646 4.202040 TGACTTTGCAGACAAGGTTGATTG 60.202 41.667 1.91 0.00 45.23 2.67
2791 4654 6.070481 TGCAGACAAGGTTGATTGTATACCTA 60.070 38.462 0.00 0.00 43.32 3.08
2917 4792 2.164017 TGTGATTCCGAACATGCATTGG 59.836 45.455 0.00 0.00 0.00 3.16
2980 4855 4.141482 GGGAAAGATTGTGGATGCTACCTA 60.141 45.833 0.00 0.00 0.00 3.08
3070 4954 5.414360 TGCAATGTTTGTGCTGAAAAGTTA 58.586 33.333 0.00 0.00 42.69 2.24
3087 4971 8.450964 TGAAAAGTTACTTCTGTTTCAGTCAAG 58.549 33.333 0.00 0.00 34.24 3.02
3103 4987 7.094508 TCAGTCAAGAATTTGTGCTTGTTTA 57.905 32.000 0.00 0.00 41.60 2.01
3110 4994 8.872845 CAAGAATTTGTGCTTGTTTAGAAAACT 58.127 29.630 4.35 0.00 37.35 2.66
3141 5025 7.739498 TCCTTTTCTACACAAAAGTATCCAC 57.261 36.000 5.26 0.00 40.43 4.02
3160 5045 5.686753 TCCACCTTAAGTGCTACTTTTTCA 58.313 37.500 0.97 0.00 45.83 2.69
3168 5053 3.318839 AGTGCTACTTTTTCATTGCTGCA 59.681 39.130 0.00 0.00 0.00 4.41
3181 5066 2.284754 TGCTGCAAATGGTCAACCTA 57.715 45.000 0.00 0.00 36.82 3.08
3258 5152 8.846943 TTATGATCTCACACACAAATGTTAGT 57.153 30.769 0.00 0.00 36.72 2.24
3288 5182 5.801531 TTGAAGACCTTCTAGTTACAGCA 57.198 39.130 10.67 0.00 40.14 4.41
3361 5256 7.286775 TCCTACTGTAAAACTTGAAATTTGGCT 59.713 33.333 0.00 0.00 0.00 4.75
3392 5287 3.702548 GTGTGTTTCTTACCCTGGGTTTT 59.297 43.478 26.00 0.70 37.09 2.43
3434 5329 1.682087 GCAGGCCCCTTCGTTTTCTAT 60.682 52.381 0.00 0.00 0.00 1.98
3466 5361 3.586174 AGCCCAGATCATACAGCATATGT 59.414 43.478 4.29 0.00 46.45 2.29
3484 5379 6.694411 GCATATGTTTGAACCAGATCAACATC 59.306 38.462 4.29 0.00 38.95 3.06
3499 5394 7.328982 CAGATCAACATCAGTAGCATGATACTC 59.671 40.741 20.45 6.86 37.84 2.59
3500 5395 5.847304 TCAACATCAGTAGCATGATACTCC 58.153 41.667 20.45 0.00 37.84 3.85
3501 5396 4.881019 ACATCAGTAGCATGATACTCCC 57.119 45.455 20.45 0.00 37.84 4.30
3502 5397 4.487804 ACATCAGTAGCATGATACTCCCT 58.512 43.478 20.45 5.81 37.84 4.20
3503 5398 4.526262 ACATCAGTAGCATGATACTCCCTC 59.474 45.833 20.45 0.00 37.84 4.30
3504 5399 4.461450 TCAGTAGCATGATACTCCCTCT 57.539 45.455 20.45 0.00 33.68 3.69
3505 5400 4.148079 TCAGTAGCATGATACTCCCTCTG 58.852 47.826 20.45 9.71 33.68 3.35
3506 5401 3.894427 CAGTAGCATGATACTCCCTCTGT 59.106 47.826 20.45 0.00 33.68 3.41
3507 5402 5.073428 CAGTAGCATGATACTCCCTCTGTA 58.927 45.833 20.45 0.00 33.68 2.74
3508 5403 5.536538 CAGTAGCATGATACTCCCTCTGTAA 59.463 44.000 20.45 0.00 33.68 2.41
3509 5404 6.040955 CAGTAGCATGATACTCCCTCTGTAAA 59.959 42.308 20.45 0.00 33.68 2.01
3510 5405 5.283457 AGCATGATACTCCCTCTGTAAAC 57.717 43.478 0.00 0.00 0.00 2.01
3511 5406 4.965532 AGCATGATACTCCCTCTGTAAACT 59.034 41.667 0.00 0.00 0.00 2.66
3512 5407 6.136857 AGCATGATACTCCCTCTGTAAACTA 58.863 40.000 0.00 0.00 0.00 2.24
3513 5408 6.611642 AGCATGATACTCCCTCTGTAAACTAA 59.388 38.462 0.00 0.00 0.00 2.24
3514 5409 7.291182 AGCATGATACTCCCTCTGTAAACTAAT 59.709 37.037 0.00 0.00 0.00 1.73
3515 5410 8.585881 GCATGATACTCCCTCTGTAAACTAATA 58.414 37.037 0.00 0.00 0.00 0.98
3522 5417 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
3523 5418 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
3524 5419 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
3525 5420 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
3526 5421 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
3543 5438 9.570488 AAGAGCGTTTAGATAACTAAAGTAGTG 57.430 33.333 5.51 0.00 45.42 2.74
3544 5439 8.954350 AGAGCGTTTAGATAACTAAAGTAGTGA 58.046 33.333 5.51 0.00 45.42 3.41
3545 5440 9.733219 GAGCGTTTAGATAACTAAAGTAGTGAT 57.267 33.333 5.51 0.00 45.42 3.06
3546 5441 9.733219 AGCGTTTAGATAACTAAAGTAGTGATC 57.267 33.333 5.51 5.03 45.42 2.92
3554 5449 9.733219 GATAACTAAAGTAGTGATCTAAACGCT 57.267 33.333 5.75 0.00 41.55 5.07
3555 5450 9.733219 ATAACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.39 5.03
3556 5451 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
3557 5452 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
3558 5453 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
3559 5454 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
3571 5466 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
3572 5467 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
3573 5468 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
3574 5469 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
3575 5470 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
3576 5471 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
3577 5472 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
3578 5473 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
3579 5474 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
3580 5475 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
3581 5476 9.294614 CTTATATTAGTTTACGGAGGGAGTACT 57.705 37.037 0.00 0.00 0.00 2.73
3585 5480 8.628630 ATTAGTTTACGGAGGGAGTACTATAC 57.371 38.462 0.00 0.00 0.00 1.47
3586 5481 6.259346 AGTTTACGGAGGGAGTACTATACT 57.741 41.667 0.00 0.00 42.86 2.12
3587 5482 6.667661 AGTTTACGGAGGGAGTACTATACTT 58.332 40.000 0.00 0.00 39.59 2.24
3588 5483 7.806180 AGTTTACGGAGGGAGTACTATACTTA 58.194 38.462 0.00 0.00 39.59 2.24
3589 5484 8.443979 AGTTTACGGAGGGAGTACTATACTTAT 58.556 37.037 0.00 0.00 39.59 1.73
3590 5485 9.072375 GTTTACGGAGGGAGTACTATACTTATT 57.928 37.037 0.00 0.00 39.59 1.40
3591 5486 8.854614 TTACGGAGGGAGTACTATACTTATTC 57.145 38.462 0.00 0.00 39.59 1.75
3592 5487 5.936956 ACGGAGGGAGTACTATACTTATTCG 59.063 44.000 0.00 1.55 39.59 3.34
3593 5488 5.353678 CGGAGGGAGTACTATACTTATTCGG 59.646 48.000 0.00 0.00 39.59 4.30
3594 5489 6.244654 GGAGGGAGTACTATACTTATTCGGT 58.755 44.000 0.00 0.00 39.59 4.69
3595 5490 6.718912 GGAGGGAGTACTATACTTATTCGGTT 59.281 42.308 0.00 0.00 39.59 4.44
3596 5491 7.094420 GGAGGGAGTACTATACTTATTCGGTTC 60.094 44.444 0.00 0.00 39.59 3.62
3597 5492 7.525165 AGGGAGTACTATACTTATTCGGTTCT 58.475 38.462 0.00 0.00 39.59 3.01
3598 5493 8.003629 AGGGAGTACTATACTTATTCGGTTCTT 58.996 37.037 0.00 0.00 39.59 2.52
3599 5494 8.296000 GGGAGTACTATACTTATTCGGTTCTTC 58.704 40.741 0.00 0.00 39.59 2.87
3600 5495 8.296000 GGAGTACTATACTTATTCGGTTCTTCC 58.704 40.741 0.00 0.00 39.59 3.46
3601 5496 8.757982 AGTACTATACTTATTCGGTTCTTCCA 57.242 34.615 0.00 0.00 34.86 3.53
3602 5497 9.193806 AGTACTATACTTATTCGGTTCTTCCAA 57.806 33.333 0.00 0.00 34.86 3.53
3603 5498 9.242477 GTACTATACTTATTCGGTTCTTCCAAC 57.758 37.037 0.00 0.00 35.57 3.77
3604 5499 7.270779 ACTATACTTATTCGGTTCTTCCAACC 58.729 38.462 0.00 0.00 36.96 3.77
3605 5500 4.635699 ACTTATTCGGTTCTTCCAACCT 57.364 40.909 2.17 0.00 38.15 3.50
3606 5501 4.324267 ACTTATTCGGTTCTTCCAACCTG 58.676 43.478 2.17 0.00 38.15 4.00
3607 5502 2.951229 ATTCGGTTCTTCCAACCTGT 57.049 45.000 2.17 0.00 38.15 4.00
3608 5503 2.721425 TTCGGTTCTTCCAACCTGTT 57.279 45.000 2.17 0.00 38.15 3.16
3609 5504 2.249844 TCGGTTCTTCCAACCTGTTC 57.750 50.000 2.17 0.00 38.15 3.18
3610 5505 1.487142 TCGGTTCTTCCAACCTGTTCA 59.513 47.619 2.17 0.00 38.15 3.18
3611 5506 1.873591 CGGTTCTTCCAACCTGTTCAG 59.126 52.381 2.17 0.00 38.15 3.02
3612 5507 2.745152 CGGTTCTTCCAACCTGTTCAGT 60.745 50.000 2.17 0.00 38.15 3.41
3613 5508 3.288092 GGTTCTTCCAACCTGTTCAGTT 58.712 45.455 0.00 0.00 37.34 3.16
3614 5509 3.315470 GGTTCTTCCAACCTGTTCAGTTC 59.685 47.826 0.00 0.00 37.34 3.01
3615 5510 3.208747 TCTTCCAACCTGTTCAGTTCC 57.791 47.619 0.00 0.00 0.00 3.62
3616 5511 2.507886 TCTTCCAACCTGTTCAGTTCCA 59.492 45.455 0.00 0.00 0.00 3.53
3617 5512 3.053991 TCTTCCAACCTGTTCAGTTCCAA 60.054 43.478 0.00 0.00 0.00 3.53
3618 5513 2.930950 TCCAACCTGTTCAGTTCCAAG 58.069 47.619 0.00 0.00 0.00 3.61
3619 5514 2.241176 TCCAACCTGTTCAGTTCCAAGT 59.759 45.455 0.00 0.00 0.00 3.16
3620 5515 2.358898 CCAACCTGTTCAGTTCCAAGTG 59.641 50.000 0.00 0.00 0.00 3.16
3621 5516 3.278574 CAACCTGTTCAGTTCCAAGTGA 58.721 45.455 0.00 0.00 36.62 3.41
3622 5517 3.199880 ACCTGTTCAGTTCCAAGTGAG 57.800 47.619 0.00 0.00 39.36 3.51
3623 5518 2.158755 ACCTGTTCAGTTCCAAGTGAGG 60.159 50.000 0.00 0.00 39.36 3.86
3624 5519 2.104792 CCTGTTCAGTTCCAAGTGAGGA 59.895 50.000 0.00 0.00 39.36 3.71
3625 5520 3.397482 CTGTTCAGTTCCAAGTGAGGAG 58.603 50.000 0.00 0.00 39.36 3.69
3626 5521 2.147150 GTTCAGTTCCAAGTGAGGAGC 58.853 52.381 0.00 0.00 39.36 4.70
3627 5522 0.687354 TCAGTTCCAAGTGAGGAGCC 59.313 55.000 0.00 0.00 39.47 4.70
3628 5523 0.689623 CAGTTCCAAGTGAGGAGCCT 59.310 55.000 0.00 0.00 39.47 4.58
3629 5524 0.980423 AGTTCCAAGTGAGGAGCCTC 59.020 55.000 9.61 9.61 39.47 4.70
3641 5536 4.722220 TGAGGAGCCTCATTATTTCCATG 58.278 43.478 15.01 0.00 46.80 3.66
3642 5537 4.413189 TGAGGAGCCTCATTATTTCCATGA 59.587 41.667 15.01 0.00 46.80 3.07
3643 5538 5.103982 TGAGGAGCCTCATTATTTCCATGAA 60.104 40.000 15.01 0.00 46.80 2.57
3644 5539 5.383476 AGGAGCCTCATTATTTCCATGAAG 58.617 41.667 0.00 0.00 30.12 3.02
3645 5540 5.103771 AGGAGCCTCATTATTTCCATGAAGT 60.104 40.000 0.00 0.00 30.12 3.01
3646 5541 6.101734 AGGAGCCTCATTATTTCCATGAAGTA 59.898 38.462 0.00 0.00 30.12 2.24
3647 5542 6.944862 GGAGCCTCATTATTTCCATGAAGTAT 59.055 38.462 0.00 0.00 30.12 2.12
3648 5543 7.120432 GGAGCCTCATTATTTCCATGAAGTATC 59.880 40.741 0.00 0.00 30.12 2.24
3649 5544 6.944862 AGCCTCATTATTTCCATGAAGTATCC 59.055 38.462 0.00 0.00 30.12 2.59
3650 5545 6.944862 GCCTCATTATTTCCATGAAGTATCCT 59.055 38.462 0.00 0.00 30.12 3.24
3651 5546 7.449704 GCCTCATTATTTCCATGAAGTATCCTT 59.550 37.037 0.00 0.00 30.12 3.36
3652 5547 8.790718 CCTCATTATTTCCATGAAGTATCCTTG 58.209 37.037 0.00 0.00 30.12 3.61
3653 5548 9.347240 CTCATTATTTCCATGAAGTATCCTTGT 57.653 33.333 0.00 0.00 30.12 3.16
3654 5549 9.699410 TCATTATTTCCATGAAGTATCCTTGTT 57.301 29.630 0.00 0.00 0.00 2.83
3659 5554 7.831691 TTCCATGAAGTATCCTTGTTTTTCA 57.168 32.000 0.00 0.00 0.00 2.69
3660 5555 7.452880 TCCATGAAGTATCCTTGTTTTTCAG 57.547 36.000 0.00 0.00 0.00 3.02
3661 5556 6.071952 TCCATGAAGTATCCTTGTTTTTCAGC 60.072 38.462 0.00 0.00 0.00 4.26
3662 5557 6.294675 CCATGAAGTATCCTTGTTTTTCAGCA 60.295 38.462 0.00 0.00 0.00 4.41
3663 5558 6.707440 TGAAGTATCCTTGTTTTTCAGCAA 57.293 33.333 0.00 0.00 0.00 3.91
3664 5559 6.738114 TGAAGTATCCTTGTTTTTCAGCAAG 58.262 36.000 0.00 0.00 41.08 4.01
3665 5560 6.321181 TGAAGTATCCTTGTTTTTCAGCAAGT 59.679 34.615 0.00 0.00 40.13 3.16
3666 5561 6.319141 AGTATCCTTGTTTTTCAGCAAGTC 57.681 37.500 0.00 0.00 40.13 3.01
3667 5562 5.827797 AGTATCCTTGTTTTTCAGCAAGTCA 59.172 36.000 0.00 0.00 40.13 3.41
3668 5563 4.370364 TCCTTGTTTTTCAGCAAGTCAC 57.630 40.909 0.00 0.00 40.13 3.67
3669 5564 4.016444 TCCTTGTTTTTCAGCAAGTCACT 58.984 39.130 0.00 0.00 40.13 3.41
3670 5565 5.189928 TCCTTGTTTTTCAGCAAGTCACTA 58.810 37.500 0.00 0.00 40.13 2.74
3671 5566 5.065988 TCCTTGTTTTTCAGCAAGTCACTAC 59.934 40.000 0.00 0.00 40.13 2.73
3672 5567 5.163663 CCTTGTTTTTCAGCAAGTCACTACA 60.164 40.000 0.00 0.00 40.13 2.74
3673 5568 6.449635 TTGTTTTTCAGCAAGTCACTACAT 57.550 33.333 0.00 0.00 0.00 2.29
3674 5569 5.820131 TGTTTTTCAGCAAGTCACTACATG 58.180 37.500 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.736682 CCAACGCGTCGACCCATTC 61.737 63.158 14.44 0.00 0.00 2.67
24 25 0.673985 GACAAAAGTGGAGGCCCAAC 59.326 55.000 0.00 0.00 45.59 3.77
45 46 1.795962 CATTCGTTTGGTTCGGCGC 60.796 57.895 0.00 0.00 0.00 6.53
53 54 0.515564 GTCCGTCACCATTCGTTTGG 59.484 55.000 5.08 5.08 42.82 3.28
73 74 0.525761 CCAACGCAGGTACCCATTTG 59.474 55.000 8.74 7.19 0.00 2.32
78 79 0.953960 CAACTCCAACGCAGGTACCC 60.954 60.000 8.74 0.00 0.00 3.69
88 89 2.091852 CTCCTCAGAGCAACTCCAAC 57.908 55.000 0.00 0.00 32.13 3.77
100 101 0.173708 GTTACGTGGGAGCTCCTCAG 59.826 60.000 31.36 22.87 36.20 3.35
102 103 1.516423 GGTTACGTGGGAGCTCCTC 59.484 63.158 31.36 21.36 36.20 3.71
124 125 1.759459 CTCTCCAATACCCGGCTCCC 61.759 65.000 0.00 0.00 0.00 4.30
128 129 0.759436 TCTCCTCTCCAATACCCGGC 60.759 60.000 0.00 0.00 0.00 6.13
131 132 1.202545 GCGTTCTCCTCTCCAATACCC 60.203 57.143 0.00 0.00 0.00 3.69
136 137 1.205655 CATCTGCGTTCTCCTCTCCAA 59.794 52.381 0.00 0.00 0.00 3.53
137 138 0.820226 CATCTGCGTTCTCCTCTCCA 59.180 55.000 0.00 0.00 0.00 3.86
150 151 2.825836 CCCTTCCACGGCATCTGC 60.826 66.667 0.00 0.00 41.14 4.26
157 158 2.751436 CCACATGCCCTTCCACGG 60.751 66.667 0.00 0.00 0.00 4.94
164 165 1.337384 TAGATGACGCCACATGCCCT 61.337 55.000 0.00 0.00 36.24 5.19
167 168 1.863454 CTTCTAGATGACGCCACATGC 59.137 52.381 0.00 0.00 0.00 4.06
170 171 1.204704 CCACTTCTAGATGACGCCACA 59.795 52.381 12.31 0.00 0.00 4.17
188 189 2.665089 CCTGTCCCGTGCATACCCA 61.665 63.158 0.00 0.00 0.00 4.51
191 192 0.322187 AAACCCTGTCCCGTGCATAC 60.322 55.000 0.00 0.00 0.00 2.39
212 213 4.928661 ATCTTTTTGTGCGTACTAGCTG 57.071 40.909 4.97 0.00 38.13 4.24
228 229 9.709495 TTGCATCTATAACTTTTTGCAATCTTT 57.291 25.926 0.00 0.00 43.02 2.52
283 285 7.715249 TCAGAGTGTTTAGCTAGTGTTTGATTT 59.285 33.333 0.00 0.00 0.00 2.17
284 286 7.217200 TCAGAGTGTTTAGCTAGTGTTTGATT 58.783 34.615 0.00 0.00 0.00 2.57
285 287 6.759272 TCAGAGTGTTTAGCTAGTGTTTGAT 58.241 36.000 0.00 0.00 0.00 2.57
473 2101 7.561021 TTGTGTCTGTACTGATGCTTAAAAA 57.439 32.000 5.69 0.00 0.00 1.94
474 2102 6.293407 GCTTGTGTCTGTACTGATGCTTAAAA 60.293 38.462 5.69 0.00 0.00 1.52
475 2103 5.179368 GCTTGTGTCTGTACTGATGCTTAAA 59.821 40.000 5.69 0.00 0.00 1.52
476 2104 4.690748 GCTTGTGTCTGTACTGATGCTTAA 59.309 41.667 5.69 0.00 0.00 1.85
477 2105 4.245660 GCTTGTGTCTGTACTGATGCTTA 58.754 43.478 5.69 0.00 0.00 3.09
478 2106 3.070018 GCTTGTGTCTGTACTGATGCTT 58.930 45.455 5.69 0.00 0.00 3.91
479 2107 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
480 2108 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
481 2109 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
482 2110 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
483 2111 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
484 2112 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
485 2113 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
486 2114 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
487 2115 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
488 2116 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
489 2117 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
490 2118 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
491 2119 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
492 2120 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
493 2121 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
494 2122 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
495 2123 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
496 2124 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
497 2125 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
500 2128 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
501 2129 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
502 2130 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
503 2131 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
504 2132 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
505 2133 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
506 2134 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
507 2135 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
508 2136 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
509 2137 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
510 2138 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
511 2139 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
512 2140 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
513 2141 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
514 2142 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
515 2143 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
516 2144 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
517 2145 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
518 2146 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
519 2147 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
520 2148 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
521 2149 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
522 2150 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
523 2151 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
524 2152 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
525 2153 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
526 2154 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
527 2155 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
528 2156 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
529 2157 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
530 2158 1.506309 ATGTGCGTGTGTGCGTTCAT 61.506 50.000 0.00 0.00 37.81 2.57
531 2159 2.100024 GATGTGCGTGTGTGCGTTCA 62.100 55.000 0.00 0.00 37.81 3.18
532 2160 1.438710 GATGTGCGTGTGTGCGTTC 60.439 57.895 0.00 0.00 37.81 3.95
533 2161 2.631428 GATGTGCGTGTGTGCGTT 59.369 55.556 0.00 0.00 37.81 4.84
534 2162 2.428960 TAGGATGTGCGTGTGTGCGT 62.429 55.000 0.00 0.00 37.81 5.24
535 2163 1.736282 TAGGATGTGCGTGTGTGCG 60.736 57.895 0.00 0.00 37.81 5.34
536 2164 1.635663 GGTAGGATGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
537 2165 1.019278 GGGTAGGATGTGCGTGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
538 2166 1.295423 GGGTAGGATGTGCGTGTGT 59.705 57.895 0.00 0.00 0.00 3.72
539 2167 1.449601 GGGGTAGGATGTGCGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
540 2168 0.324923 TAGGGGTAGGATGTGCGTGT 60.325 55.000 0.00 0.00 0.00 4.49
541 2169 1.048601 ATAGGGGTAGGATGTGCGTG 58.951 55.000 0.00 0.00 0.00 5.34
542 2170 1.048601 CATAGGGGTAGGATGTGCGT 58.951 55.000 0.00 0.00 0.00 5.24
543 2171 1.273606 CTCATAGGGGTAGGATGTGCG 59.726 57.143 0.00 0.00 0.00 5.34
544 2172 1.002544 GCTCATAGGGGTAGGATGTGC 59.997 57.143 0.00 0.00 0.00 4.57
545 2173 2.037772 GTGCTCATAGGGGTAGGATGTG 59.962 54.545 0.00 0.00 0.00 3.21
546 2174 2.090494 AGTGCTCATAGGGGTAGGATGT 60.090 50.000 0.00 0.00 0.00 3.06
547 2175 2.614259 AGTGCTCATAGGGGTAGGATG 58.386 52.381 0.00 0.00 0.00 3.51
548 2176 3.243724 GAAGTGCTCATAGGGGTAGGAT 58.756 50.000 0.00 0.00 0.00 3.24
549 2177 2.679082 GAAGTGCTCATAGGGGTAGGA 58.321 52.381 0.00 0.00 0.00 2.94
550 2178 1.694696 GGAAGTGCTCATAGGGGTAGG 59.305 57.143 0.00 0.00 0.00 3.18
551 2179 1.341531 CGGAAGTGCTCATAGGGGTAG 59.658 57.143 0.00 0.00 0.00 3.18
552 2180 1.063492 TCGGAAGTGCTCATAGGGGTA 60.063 52.381 0.00 0.00 0.00 3.69
553 2181 0.325296 TCGGAAGTGCTCATAGGGGT 60.325 55.000 0.00 0.00 0.00 4.95
554 2182 0.830648 TTCGGAAGTGCTCATAGGGG 59.169 55.000 0.00 0.00 0.00 4.79
555 2183 2.168521 TCTTTCGGAAGTGCTCATAGGG 59.831 50.000 2.72 0.00 34.41 3.53
556 2184 3.118956 AGTCTTTCGGAAGTGCTCATAGG 60.119 47.826 2.72 0.00 34.41 2.57
557 2185 3.862267 CAGTCTTTCGGAAGTGCTCATAG 59.138 47.826 2.72 0.00 34.41 2.23
558 2186 3.509967 TCAGTCTTTCGGAAGTGCTCATA 59.490 43.478 2.72 0.00 34.41 2.15
559 2187 2.300152 TCAGTCTTTCGGAAGTGCTCAT 59.700 45.455 2.72 0.00 34.41 2.90
560 2188 1.686587 TCAGTCTTTCGGAAGTGCTCA 59.313 47.619 2.72 0.00 34.41 4.26
561 2189 2.333014 CTCAGTCTTTCGGAAGTGCTC 58.667 52.381 2.72 0.00 34.41 4.26
562 2190 1.606737 GCTCAGTCTTTCGGAAGTGCT 60.607 52.381 2.72 0.46 34.41 4.40
563 2191 0.793250 GCTCAGTCTTTCGGAAGTGC 59.207 55.000 2.72 0.00 34.41 4.40
564 2192 1.433534 GGCTCAGTCTTTCGGAAGTG 58.566 55.000 2.72 0.00 34.41 3.16
565 2193 0.038159 CGGCTCAGTCTTTCGGAAGT 60.038 55.000 2.72 0.00 34.41 3.01
566 2194 0.737715 CCGGCTCAGTCTTTCGGAAG 60.738 60.000 0.00 0.00 42.94 3.46
567 2195 1.292223 CCGGCTCAGTCTTTCGGAA 59.708 57.895 0.00 0.00 42.94 4.30
568 2196 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
569 2197 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
570 2198 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
571 2199 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
572 2200 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
573 2201 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
574 2202 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
575 2203 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
576 2204 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
577 2205 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
578 2206 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
579 2207 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
580 2208 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
581 2209 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
582 2210 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
583 2211 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
584 2212 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
585 2213 7.232994 GCTTCGTAAATCTCAAGATGATATGC 58.767 38.462 0.00 0.00 34.49 3.14
586 2214 7.386025 TGGCTTCGTAAATCTCAAGATGATATG 59.614 37.037 0.00 0.00 34.49 1.78
587 2215 7.386299 GTGGCTTCGTAAATCTCAAGATGATAT 59.614 37.037 0.00 0.00 34.49 1.63
588 2216 6.701841 GTGGCTTCGTAAATCTCAAGATGATA 59.298 38.462 0.00 0.00 34.49 2.15
589 2217 5.525378 GTGGCTTCGTAAATCTCAAGATGAT 59.475 40.000 0.00 0.00 34.49 2.45
590 2218 4.870426 GTGGCTTCGTAAATCTCAAGATGA 59.130 41.667 0.00 0.00 34.49 2.92
591 2219 4.259970 CGTGGCTTCGTAAATCTCAAGATG 60.260 45.833 0.00 0.00 34.49 2.90
592 2220 3.865745 CGTGGCTTCGTAAATCTCAAGAT 59.134 43.478 0.00 0.00 36.07 2.40
593 2221 3.250744 CGTGGCTTCGTAAATCTCAAGA 58.749 45.455 0.00 0.00 0.00 3.02
594 2222 2.993899 ACGTGGCTTCGTAAATCTCAAG 59.006 45.455 6.53 0.00 42.35 3.02
595 2223 3.034721 ACGTGGCTTCGTAAATCTCAA 57.965 42.857 6.53 0.00 42.35 3.02
596 2224 2.736144 ACGTGGCTTCGTAAATCTCA 57.264 45.000 6.53 0.00 42.35 3.27
597 2225 3.114065 CCTACGTGGCTTCGTAAATCTC 58.886 50.000 13.92 0.00 43.89 2.75
598 2226 3.160777 CCTACGTGGCTTCGTAAATCT 57.839 47.619 13.92 0.00 43.89 2.40
610 2238 2.813908 GACAAGGCGCCTACGTGG 60.814 66.667 33.07 18.90 42.83 4.94
611 2239 3.179265 CGACAAGGCGCCTACGTG 61.179 66.667 33.07 26.80 42.83 4.49
612 2240 3.621892 GACGACAAGGCGCCTACGT 62.622 63.158 37.13 37.13 42.83 3.57
613 2241 2.879462 GACGACAAGGCGCCTACG 60.879 66.667 32.96 32.96 44.07 3.51
620 2248 3.562779 TTCCCGTCGACGACAAGGC 62.563 63.158 37.65 0.45 43.02 4.35
621 2249 1.731969 GTTCCCGTCGACGACAAGG 60.732 63.158 37.65 28.37 43.02 3.61
622 2250 2.078914 CGTTCCCGTCGACGACAAG 61.079 63.158 37.65 20.95 41.53 3.16
623 2251 2.051076 CGTTCCCGTCGACGACAA 60.051 61.111 37.65 25.24 41.53 3.18
624 2252 3.279116 ACGTTCCCGTCGACGACA 61.279 61.111 37.65 21.01 46.28 4.35
635 2263 2.606826 AGTGGGAGGGGACGTTCC 60.607 66.667 3.45 3.45 43.46 3.62
636 2264 1.477685 TTCAGTGGGAGGGGACGTTC 61.478 60.000 0.00 0.00 0.00 3.95
637 2265 1.057851 TTTCAGTGGGAGGGGACGTT 61.058 55.000 0.00 0.00 0.00 3.99
638 2266 1.460689 TTTCAGTGGGAGGGGACGT 60.461 57.895 0.00 0.00 0.00 4.34
639 2267 1.296715 CTTTCAGTGGGAGGGGACG 59.703 63.158 0.00 0.00 0.00 4.79
640 2268 1.002011 GCTTTCAGTGGGAGGGGAC 60.002 63.158 0.00 0.00 0.00 4.46
641 2269 1.463214 TGCTTTCAGTGGGAGGGGA 60.463 57.895 0.00 0.00 0.00 4.81
642 2270 1.303643 GTGCTTTCAGTGGGAGGGG 60.304 63.158 0.00 0.00 0.00 4.79
643 2271 0.038744 ATGTGCTTTCAGTGGGAGGG 59.961 55.000 0.00 0.00 0.00 4.30
644 2272 1.457346 GATGTGCTTTCAGTGGGAGG 58.543 55.000 0.00 0.00 0.00 4.30
645 2273 1.081892 CGATGTGCTTTCAGTGGGAG 58.918 55.000 0.00 0.00 0.00 4.30
646 2274 0.955428 GCGATGTGCTTTCAGTGGGA 60.955 55.000 0.00 0.00 41.73 4.37
647 2275 1.503542 GCGATGTGCTTTCAGTGGG 59.496 57.895 0.00 0.00 41.73 4.61
648 2276 1.503542 GGCGATGTGCTTTCAGTGG 59.496 57.895 0.00 0.00 45.43 4.00
649 2277 1.133253 CGGCGATGTGCTTTCAGTG 59.867 57.895 0.00 0.00 45.43 3.66
650 2278 2.034879 CCGGCGATGTGCTTTCAGT 61.035 57.895 9.30 0.00 45.43 3.41
651 2279 1.298157 TTCCGGCGATGTGCTTTCAG 61.298 55.000 9.30 0.00 45.43 3.02
652 2280 0.886938 TTTCCGGCGATGTGCTTTCA 60.887 50.000 9.30 0.00 45.43 2.69
653 2281 0.451783 ATTTCCGGCGATGTGCTTTC 59.548 50.000 9.30 0.00 45.43 2.62
654 2282 0.451783 GATTTCCGGCGATGTGCTTT 59.548 50.000 9.30 0.00 45.43 3.51
655 2283 1.376609 GGATTTCCGGCGATGTGCTT 61.377 55.000 9.30 0.00 45.43 3.91
656 2284 1.819632 GGATTTCCGGCGATGTGCT 60.820 57.895 9.30 0.00 45.43 4.40
657 2285 1.819632 AGGATTTCCGGCGATGTGC 60.820 57.895 9.30 0.00 42.08 4.57
658 2286 0.461870 TCAGGATTTCCGGCGATGTG 60.462 55.000 9.30 0.00 42.08 3.21
659 2287 0.251916 TTCAGGATTTCCGGCGATGT 59.748 50.000 9.30 0.00 42.08 3.06
660 2288 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
661 2289 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
662 2290 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
663 2291 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
664 2292 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
665 2293 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
673 2301 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
674 2302 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
675 2303 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
676 2304 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
677 2305 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
678 2306 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
679 2307 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
680 2308 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
681 2309 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
682 2310 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
683 2311 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
684 2312 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
685 2313 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
686 2314 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
687 2315 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
688 2316 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
689 2317 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
690 2318 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
691 2319 2.645838 AATCCTGGTGCTCGCATTAT 57.354 45.000 0.00 0.00 0.00 1.28
692 2320 2.418368 AAATCCTGGTGCTCGCATTA 57.582 45.000 0.00 0.00 0.00 1.90
693 2321 2.418368 TAAATCCTGGTGCTCGCATT 57.582 45.000 0.00 0.00 0.00 3.56
694 2322 2.418368 TTAAATCCTGGTGCTCGCAT 57.582 45.000 0.00 0.00 0.00 4.73
695 2323 1.810151 GTTTAAATCCTGGTGCTCGCA 59.190 47.619 0.00 0.00 0.00 5.10
696 2324 1.132453 GGTTTAAATCCTGGTGCTCGC 59.868 52.381 0.00 0.00 0.00 5.03
697 2325 1.743394 GGGTTTAAATCCTGGTGCTCG 59.257 52.381 10.45 0.00 0.00 5.03
698 2326 3.087370 AGGGTTTAAATCCTGGTGCTC 57.913 47.619 19.53 0.00 38.36 4.26
705 2333 4.352893 CAATCCACCAGGGTTTAAATCCT 58.647 43.478 14.63 14.63 41.23 3.24
706 2334 3.450817 CCAATCCACCAGGGTTTAAATCC 59.549 47.826 9.68 9.68 35.53 3.01
707 2335 3.450817 CCCAATCCACCAGGGTTTAAATC 59.549 47.826 0.00 0.00 35.53 2.17
708 2336 3.449918 CCCAATCCACCAGGGTTTAAAT 58.550 45.455 0.00 0.00 35.53 1.40
709 2337 2.493687 CCCCAATCCACCAGGGTTTAAA 60.494 50.000 0.00 0.00 35.53 1.52
710 2338 1.077993 CCCCAATCCACCAGGGTTTAA 59.922 52.381 0.00 0.00 35.53 1.52
711 2339 0.707616 CCCCAATCCACCAGGGTTTA 59.292 55.000 0.00 0.00 35.53 2.01
712 2340 1.077298 TCCCCAATCCACCAGGGTTT 61.077 55.000 0.00 0.00 35.53 3.27
713 2341 0.855400 ATCCCCAATCCACCAGGGTT 60.855 55.000 0.00 0.00 39.40 4.11
714 2342 0.047176 TATCCCCAATCCACCAGGGT 59.953 55.000 0.00 0.00 41.16 4.34
715 2343 0.478507 GTATCCCCAATCCACCAGGG 59.521 60.000 0.00 0.00 42.44 4.45
716 2344 0.478507 GGTATCCCCAATCCACCAGG 59.521 60.000 0.00 0.00 0.00 4.45
717 2345 1.221635 TGGTATCCCCAATCCACCAG 58.778 55.000 0.00 0.00 41.50 4.00
718 2346 3.444955 TGGTATCCCCAATCCACCA 57.555 52.632 0.00 0.00 41.50 4.17
726 2354 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
727 2355 0.912487 TGGTGGACAGTGGTATCCCC 60.912 60.000 0.00 0.00 33.69 4.81
728 2356 0.988832 TTGGTGGACAGTGGTATCCC 59.011 55.000 0.00 0.00 33.69 3.85
729 2357 2.433436 GTTTGGTGGACAGTGGTATCC 58.567 52.381 0.00 0.00 35.37 2.59
730 2358 2.224670 TGGTTTGGTGGACAGTGGTATC 60.225 50.000 0.00 0.00 0.00 2.24
731 2359 1.777878 TGGTTTGGTGGACAGTGGTAT 59.222 47.619 0.00 0.00 0.00 2.73
732 2360 1.214217 TGGTTTGGTGGACAGTGGTA 58.786 50.000 0.00 0.00 0.00 3.25
733 2361 0.555769 ATGGTTTGGTGGACAGTGGT 59.444 50.000 0.00 0.00 0.00 4.16
734 2362 1.202927 AGATGGTTTGGTGGACAGTGG 60.203 52.381 0.00 0.00 0.00 4.00
735 2363 2.154462 GAGATGGTTTGGTGGACAGTG 58.846 52.381 0.00 0.00 0.00 3.66
736 2364 1.774254 TGAGATGGTTTGGTGGACAGT 59.226 47.619 0.00 0.00 0.00 3.55
737 2365 2.554032 GTTGAGATGGTTTGGTGGACAG 59.446 50.000 0.00 0.00 0.00 3.51
738 2366 2.582052 GTTGAGATGGTTTGGTGGACA 58.418 47.619 0.00 0.00 0.00 4.02
739 2367 1.886542 GGTTGAGATGGTTTGGTGGAC 59.113 52.381 0.00 0.00 0.00 4.02
740 2368 1.496857 TGGTTGAGATGGTTTGGTGGA 59.503 47.619 0.00 0.00 0.00 4.02
741 2369 1.613437 GTGGTTGAGATGGTTTGGTGG 59.387 52.381 0.00 0.00 0.00 4.61
742 2370 2.294233 CTGTGGTTGAGATGGTTTGGTG 59.706 50.000 0.00 0.00 0.00 4.17
743 2371 2.586425 CTGTGGTTGAGATGGTTTGGT 58.414 47.619 0.00 0.00 0.00 3.67
744 2372 1.888512 CCTGTGGTTGAGATGGTTTGG 59.111 52.381 0.00 0.00 0.00 3.28
745 2373 2.586425 ACCTGTGGTTGAGATGGTTTG 58.414 47.619 0.00 0.00 27.29 2.93
746 2374 3.312736 AACCTGTGGTTGAGATGGTTT 57.687 42.857 0.71 0.00 45.07 3.27
757 2385 1.686355 TTTGCGAATCAACCTGTGGT 58.314 45.000 0.00 0.00 37.65 4.16
758 2386 2.791383 TTTTGCGAATCAACCTGTGG 57.209 45.000 0.00 0.00 33.73 4.17
813 2441 2.965572 ATGGCCATCGTTTTGGATTG 57.034 45.000 14.09 0.00 39.25 2.67
990 2733 2.047274 CTGTTCATGTCCGGCCGT 60.047 61.111 26.12 1.14 0.00 5.68
1286 3029 1.304962 TGGAGGTTGAGAGGCGCTA 60.305 57.895 7.64 0.00 0.00 4.26
1339 3082 2.438795 GGAGACGACGGAGAGGCT 60.439 66.667 0.00 0.00 0.00 4.58
1447 3191 0.735471 CAGTTCTCGATCTGAGCGGA 59.265 55.000 15.80 8.76 44.86 5.54
2005 3799 9.276590 TGCATGTAAGAGTTAAGATGATTATGG 57.723 33.333 0.00 0.00 0.00 2.74
2256 4078 4.019411 TCCAACAGATTATTGTCTCTGCCA 60.019 41.667 0.00 0.00 42.12 4.92
2257 4079 4.517285 TCCAACAGATTATTGTCTCTGCC 58.483 43.478 0.00 0.00 42.12 4.85
2354 4184 6.117911 TGACGTGCATTTTTCATACCTATG 57.882 37.500 0.00 0.00 35.04 2.23
2504 4334 5.300286 ACTGACTCCAAATTTGAGTTCCTTG 59.700 40.000 19.86 11.33 0.00 3.61
2597 4460 0.817013 TGAATTCCAATTGAGCGCCC 59.183 50.000 7.12 0.00 0.00 6.13
2628 4491 1.134220 GGCATCCAAAGACGACCCATA 60.134 52.381 0.00 0.00 0.00 2.74
2632 4495 1.002624 TGGGCATCCAAAGACGACC 60.003 57.895 0.00 0.00 40.73 4.79
2688 4551 8.818141 TCGTCATCTATTCATCTTCATTTACC 57.182 34.615 0.00 0.00 0.00 2.85
2715 4578 6.860080 ACCATTGACATGCTTATTCTGAAAG 58.140 36.000 0.00 0.00 0.00 2.62
2732 4595 6.115446 GGATGAGTCACAGATAAACCATTGA 58.885 40.000 0.00 0.00 0.00 2.57
2752 4615 2.821378 TGTCTGCAAAGTCAATGGGATG 59.179 45.455 0.00 0.00 0.00 3.51
2755 4618 2.029649 CCTTGTCTGCAAAGTCAATGGG 60.030 50.000 0.00 0.00 33.73 4.00
2763 4626 4.311816 ACAATCAACCTTGTCTGCAAAG 57.688 40.909 0.00 0.00 34.26 2.77
2764 4627 6.072175 GGTATACAATCAACCTTGTCTGCAAA 60.072 38.462 5.01 0.00 39.88 3.68
2917 4792 8.330302 GGCAATTAACTATTTTTGCATGACATC 58.670 33.333 10.45 0.00 44.77 3.06
2980 4855 6.594788 AACATAATGCAACTGGAACAATCT 57.405 33.333 0.00 0.00 38.70 2.40
3070 4954 7.253422 CACAAATTCTTGACTGAAACAGAAGT 58.747 34.615 5.76 0.00 36.33 3.01
3087 4971 8.406172 TGAGTTTTCTAAACAAGCACAAATTC 57.594 30.769 5.23 0.00 0.00 2.17
3103 4987 9.274206 GTGTAGAAAAGGATAGTTGAGTTTTCT 57.726 33.333 11.79 11.79 45.14 2.52
3110 4994 8.974060 ACTTTTGTGTAGAAAAGGATAGTTGA 57.026 30.769 15.74 0.00 44.11 3.18
3124 5008 7.360946 GCACTTAAGGTGGATACTTTTGTGTAG 60.361 40.741 7.53 0.00 45.44 2.74
3141 5025 6.583806 CAGCAATGAAAAAGTAGCACTTAAGG 59.416 38.462 7.53 0.00 37.47 2.69
3160 5045 1.972795 AGGTTGACCATTTGCAGCAAT 59.027 42.857 9.12 0.00 38.89 3.56
3168 5053 6.182507 TCAACAGTACTAGGTTGACCATTT 57.817 37.500 19.54 0.00 46.01 2.32
3280 5174 1.603802 ACACACTGTGCATGCTGTAAC 59.396 47.619 20.33 9.16 36.98 2.50
3341 5235 7.923878 GGACTTAGCCAAATTTCAAGTTTTACA 59.076 33.333 0.00 0.00 29.89 2.41
3349 5243 4.280677 CACTGGGACTTAGCCAAATTTCAA 59.719 41.667 0.00 0.00 0.00 2.69
3351 5245 3.826729 ACACTGGGACTTAGCCAAATTTC 59.173 43.478 0.00 0.00 0.00 2.17
3352 5246 3.573967 CACACTGGGACTTAGCCAAATTT 59.426 43.478 0.00 0.00 0.00 1.82
3361 5256 4.202388 GGGTAAGAAACACACTGGGACTTA 60.202 45.833 0.00 0.00 0.00 2.24
3392 5287 5.137551 GCAGATTACTAAGGCCCCAAATAA 58.862 41.667 0.00 0.00 0.00 1.40
3434 5329 7.373617 TGTATGATCTGGGCTGTATTTCTAA 57.626 36.000 0.00 0.00 0.00 2.10
3466 5361 5.412594 GCTACTGATGTTGATCTGGTTCAAA 59.587 40.000 0.00 0.00 37.36 2.69
3471 5366 4.162888 TCATGCTACTGATGTTGATCTGGT 59.837 41.667 0.00 0.00 33.02 4.00
3484 5379 3.894427 ACAGAGGGAGTATCATGCTACTG 59.106 47.826 13.76 2.46 36.25 2.74
3499 5394 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
3500 5395 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
3517 5412 9.570488 CACTACTTTAGTTATCTAAACGCTCTT 57.430 33.333 2.47 0.00 40.05 2.85
3518 5413 8.954350 TCACTACTTTAGTTATCTAAACGCTCT 58.046 33.333 2.47 0.00 40.05 4.09
3519 5414 9.733219 ATCACTACTTTAGTTATCTAAACGCTC 57.267 33.333 2.47 0.00 40.05 5.03
3520 5415 9.733219 GATCACTACTTTAGTTATCTAAACGCT 57.267 33.333 2.47 0.00 40.05 5.07
3521 5416 9.733219 AGATCACTACTTTAGTTATCTAAACGC 57.267 33.333 7.85 0.00 43.99 4.84
3527 5422 9.733219 GCGTTTAGATCACTACTTTAGTTATCT 57.267 33.333 12.46 12.46 46.18 1.98
3528 5423 9.733219 AGCGTTTAGATCACTACTTTAGTTATC 57.267 33.333 0.00 0.95 38.88 1.75
3529 5424 9.733219 GAGCGTTTAGATCACTACTTTAGTTAT 57.267 33.333 0.00 0.00 36.76 1.89
3530 5425 8.954350 AGAGCGTTTAGATCACTACTTTAGTTA 58.046 33.333 0.00 0.00 37.82 2.24
3531 5426 7.828712 AGAGCGTTTAGATCACTACTTTAGTT 58.171 34.615 0.00 0.00 37.82 2.24
3532 5427 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
3533 5428 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
3545 5440 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
3546 5441 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
3547 5442 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
3548 5443 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
3549 5444 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
3550 5445 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
3551 5446 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
3552 5447 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
3553 5448 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3554 5449 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
3555 5450 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
3559 5454 9.726438 GTATAGTACTCCCTCCGTAAACTAATA 57.274 37.037 0.00 0.00 0.00 0.98
3560 5455 8.443979 AGTATAGTACTCCCTCCGTAAACTAAT 58.556 37.037 0.00 0.00 32.47 1.73
3561 5456 7.806180 AGTATAGTACTCCCTCCGTAAACTAA 58.194 38.462 0.00 0.00 32.47 2.24
3562 5457 7.380423 AGTATAGTACTCCCTCCGTAAACTA 57.620 40.000 0.00 0.00 32.47 2.24
3563 5458 6.259346 AGTATAGTACTCCCTCCGTAAACT 57.741 41.667 0.00 0.00 32.47 2.66
3564 5459 6.951062 AAGTATAGTACTCCCTCCGTAAAC 57.049 41.667 0.00 0.00 38.26 2.01
3565 5460 9.289782 GAATAAGTATAGTACTCCCTCCGTAAA 57.710 37.037 0.00 0.00 38.26 2.01
3566 5461 7.604164 CGAATAAGTATAGTACTCCCTCCGTAA 59.396 40.741 0.00 0.00 38.26 3.18
3567 5462 7.099764 CGAATAAGTATAGTACTCCCTCCGTA 58.900 42.308 0.00 0.00 38.26 4.02
3568 5463 5.936956 CGAATAAGTATAGTACTCCCTCCGT 59.063 44.000 0.00 0.00 38.26 4.69
3569 5464 5.353678 CCGAATAAGTATAGTACTCCCTCCG 59.646 48.000 0.00 0.00 38.26 4.63
3570 5465 6.244654 ACCGAATAAGTATAGTACTCCCTCC 58.755 44.000 0.00 0.00 38.26 4.30
3571 5466 7.665145 AGAACCGAATAAGTATAGTACTCCCTC 59.335 40.741 0.00 0.00 38.26 4.30
3572 5467 7.525165 AGAACCGAATAAGTATAGTACTCCCT 58.475 38.462 0.00 0.00 38.26 4.20
3573 5468 7.757941 AGAACCGAATAAGTATAGTACTCCC 57.242 40.000 0.00 0.00 38.26 4.30
3574 5469 8.296000 GGAAGAACCGAATAAGTATAGTACTCC 58.704 40.741 0.00 0.00 38.26 3.85
3575 5470 8.844244 TGGAAGAACCGAATAAGTATAGTACTC 58.156 37.037 0.00 0.00 42.61 2.59
3576 5471 8.757982 TGGAAGAACCGAATAAGTATAGTACT 57.242 34.615 0.00 0.00 42.61 2.73
3577 5472 9.242477 GTTGGAAGAACCGAATAAGTATAGTAC 57.758 37.037 0.00 0.00 42.61 2.73
3578 5473 8.416329 GGTTGGAAGAACCGAATAAGTATAGTA 58.584 37.037 0.00 0.00 42.61 1.82
3579 5474 7.125356 AGGTTGGAAGAACCGAATAAGTATAGT 59.875 37.037 0.00 0.00 44.82 2.12
3580 5475 7.438459 CAGGTTGGAAGAACCGAATAAGTATAG 59.562 40.741 0.00 0.00 44.82 1.31
3581 5476 7.093201 ACAGGTTGGAAGAACCGAATAAGTATA 60.093 37.037 0.00 0.00 44.82 1.47
3582 5477 6.113411 CAGGTTGGAAGAACCGAATAAGTAT 58.887 40.000 0.00 0.00 44.82 2.12
3583 5478 5.012354 ACAGGTTGGAAGAACCGAATAAGTA 59.988 40.000 0.00 0.00 44.82 2.24
3584 5479 4.202430 ACAGGTTGGAAGAACCGAATAAGT 60.202 41.667 0.00 0.00 44.82 2.24
3585 5480 4.324267 ACAGGTTGGAAGAACCGAATAAG 58.676 43.478 0.00 0.00 44.82 1.73
3586 5481 4.360951 ACAGGTTGGAAGAACCGAATAA 57.639 40.909 0.00 0.00 44.82 1.40
3587 5482 4.202377 TGAACAGGTTGGAAGAACCGAATA 60.202 41.667 0.00 0.00 44.82 1.75
3588 5483 2.951229 ACAGGTTGGAAGAACCGAAT 57.049 45.000 0.00 0.00 44.82 3.34
3589 5484 2.092861 TGAACAGGTTGGAAGAACCGAA 60.093 45.455 0.00 0.00 44.82 4.30
3590 5485 1.487142 TGAACAGGTTGGAAGAACCGA 59.513 47.619 0.00 0.00 44.82 4.69
3591 5486 1.873591 CTGAACAGGTTGGAAGAACCG 59.126 52.381 0.00 0.00 44.82 4.44
3592 5487 2.932261 ACTGAACAGGTTGGAAGAACC 58.068 47.619 6.76 0.00 40.58 3.62
3593 5488 3.315470 GGAACTGAACAGGTTGGAAGAAC 59.685 47.826 6.76 0.00 0.00 3.01
3594 5489 3.053991 TGGAACTGAACAGGTTGGAAGAA 60.054 43.478 6.76 0.00 0.00 2.52
3595 5490 2.507886 TGGAACTGAACAGGTTGGAAGA 59.492 45.455 6.76 0.00 0.00 2.87
3596 5491 2.930950 TGGAACTGAACAGGTTGGAAG 58.069 47.619 6.76 0.00 0.00 3.46
3597 5492 3.287222 CTTGGAACTGAACAGGTTGGAA 58.713 45.455 6.76 0.00 0.00 3.53
3598 5493 2.241176 ACTTGGAACTGAACAGGTTGGA 59.759 45.455 6.76 0.00 0.00 3.53
3599 5494 2.358898 CACTTGGAACTGAACAGGTTGG 59.641 50.000 6.76 0.00 0.00 3.77
3600 5495 3.278574 TCACTTGGAACTGAACAGGTTG 58.721 45.455 6.76 0.00 0.00 3.77
3601 5496 3.545703 CTCACTTGGAACTGAACAGGTT 58.454 45.455 6.76 0.00 0.00 3.50
3602 5497 2.158755 CCTCACTTGGAACTGAACAGGT 60.159 50.000 6.76 0.00 0.00 4.00
3603 5498 2.104792 TCCTCACTTGGAACTGAACAGG 59.895 50.000 6.76 0.00 32.39 4.00
3604 5499 3.397482 CTCCTCACTTGGAACTGAACAG 58.603 50.000 0.00 0.00 35.43 3.16
3605 5500 2.485479 GCTCCTCACTTGGAACTGAACA 60.485 50.000 0.00 0.00 35.43 3.18
3606 5501 2.147150 GCTCCTCACTTGGAACTGAAC 58.853 52.381 0.00 0.00 35.43 3.18
3607 5502 1.072331 GGCTCCTCACTTGGAACTGAA 59.928 52.381 0.00 0.00 35.43 3.02
3608 5503 0.687354 GGCTCCTCACTTGGAACTGA 59.313 55.000 0.00 0.00 35.43 3.41
3609 5504 0.689623 AGGCTCCTCACTTGGAACTG 59.310 55.000 0.00 0.00 35.43 3.16
3610 5505 0.980423 GAGGCTCCTCACTTGGAACT 59.020 55.000 10.90 0.00 42.31 3.01
3611 5506 0.687354 TGAGGCTCCTCACTTGGAAC 59.313 55.000 14.26 0.00 46.80 3.62
3612 5507 3.164024 TGAGGCTCCTCACTTGGAA 57.836 52.632 14.26 0.00 46.80 3.53
3613 5508 4.975490 TGAGGCTCCTCACTTGGA 57.025 55.556 14.26 0.00 46.80 3.53
3620 5515 4.978099 TCATGGAAATAATGAGGCTCCTC 58.022 43.478 12.86 8.95 43.01 3.71
3621 5516 5.103771 ACTTCATGGAAATAATGAGGCTCCT 60.104 40.000 12.86 0.00 35.22 3.69
3622 5517 5.136105 ACTTCATGGAAATAATGAGGCTCC 58.864 41.667 12.86 0.00 35.22 4.70
3623 5518 7.120432 GGATACTTCATGGAAATAATGAGGCTC 59.880 40.741 7.79 7.79 35.22 4.70
3624 5519 6.944862 GGATACTTCATGGAAATAATGAGGCT 59.055 38.462 0.00 0.00 35.22 4.58
3625 5520 7.150783 GGATACTTCATGGAAATAATGAGGC 57.849 40.000 0.00 0.00 35.22 4.70
3644 5539 5.915196 GTGACTTGCTGAAAAACAAGGATAC 59.085 40.000 7.57 0.68 46.03 2.24
3645 5540 5.827797 AGTGACTTGCTGAAAAACAAGGATA 59.172 36.000 7.57 0.00 46.03 2.59
3646 5541 4.646492 AGTGACTTGCTGAAAAACAAGGAT 59.354 37.500 7.57 0.00 46.03 3.24
3647 5542 4.016444 AGTGACTTGCTGAAAAACAAGGA 58.984 39.130 7.57 0.00 46.03 3.36
3648 5543 4.376340 AGTGACTTGCTGAAAAACAAGG 57.624 40.909 7.57 0.00 46.03 3.61
3649 5544 5.879237 TGTAGTGACTTGCTGAAAAACAAG 58.121 37.500 0.00 0.00 46.91 3.16
3650 5545 5.888691 TGTAGTGACTTGCTGAAAAACAA 57.111 34.783 0.00 0.00 0.00 2.83
3651 5546 5.820131 CATGTAGTGACTTGCTGAAAAACA 58.180 37.500 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.