Multiple sequence alignment - TraesCS1B01G099700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G099700 chr1B 100.000 3879 0 0 1 3879 107136188 107140066 0.000000e+00 7164.0
1 TraesCS1B01G099700 chr1D 93.476 1027 45 10 1986 3001 66561560 66562575 0.000000e+00 1506.0
2 TraesCS1B01G099700 chr1D 91.287 746 48 5 3148 3879 66570105 66570847 0.000000e+00 1002.0
3 TraesCS1B01G099700 chr1D 92.569 619 35 7 63 675 66558690 66559303 0.000000e+00 878.0
4 TraesCS1B01G099700 chr1D 88.264 622 50 12 818 1431 66560621 66561227 0.000000e+00 723.0
5 TraesCS1B01G099700 chr1D 97.516 161 4 0 2995 3155 66563371 66563531 3.820000e-70 276.0
6 TraesCS1B01G099700 chr1D 91.525 118 6 2 668 785 66560445 66560558 4.010000e-35 159.0
7 TraesCS1B01G099700 chr1D 95.506 89 2 2 1487 1573 298551922 298551834 1.450000e-29 141.0
8 TraesCS1B01G099700 chr1D 90.323 93 5 1 1900 1988 52665832 52665924 6.810000e-23 119.0
9 TraesCS1B01G099700 chr1D 92.958 71 2 2 1 71 318382816 318382883 2.470000e-17 100.0
10 TraesCS1B01G099700 chr1A 95.256 801 33 3 2296 3096 65267380 65268175 0.000000e+00 1264.0
11 TraesCS1B01G099700 chr1A 89.757 742 52 14 63 800 65265093 65265814 0.000000e+00 928.0
12 TraesCS1B01G099700 chr1A 89.905 525 42 10 914 1431 65266256 65266776 0.000000e+00 665.0
13 TraesCS1B01G099700 chr1A 76.644 745 129 20 3153 3879 61572430 61573147 1.700000e-98 370.0
14 TraesCS1B01G099700 chr1A 83.908 87 14 0 2586 2672 65329859 65329945 2.480000e-12 84.2
15 TraesCS1B01G099700 chr1A 97.297 37 1 0 865 901 65266181 65266217 3.240000e-06 63.9
16 TraesCS1B01G099700 chr3A 79.352 741 131 18 3153 3879 662120753 662121485 5.790000e-138 501.0
17 TraesCS1B01G099700 chr3A 79.835 605 115 6 3277 3879 21329141 21328542 5.950000e-118 435.0
18 TraesCS1B01G099700 chr4D 79.526 718 119 11 3182 3879 468405796 468406505 1.620000e-133 486.0
19 TraesCS1B01G099700 chr4D 90.123 81 3 4 1 81 245478360 245478435 2.470000e-17 100.0
20 TraesCS1B01G099700 chr4D 90.123 81 3 4 1 81 282080010 282079935 2.470000e-17 100.0
21 TraesCS1B01G099700 chr7D 78.659 731 132 18 3153 3870 139253043 139253762 7.590000e-127 464.0
22 TraesCS1B01G099700 chr7D 96.154 78 2 1 1920 1997 529492507 529492431 4.070000e-25 126.0
23 TraesCS1B01G099700 chr7D 100.000 30 0 0 2913 2942 633494346 633494375 5.410000e-04 56.5
24 TraesCS1B01G099700 chr5D 77.957 744 138 16 3153 3879 217946317 217945583 3.560000e-120 442.0
25 TraesCS1B01G099700 chr5D 78.387 657 121 17 3232 3879 287818405 287819049 1.300000e-109 407.0
26 TraesCS1B01G099700 chr5D 90.000 80 3 4 1 79 128577650 128577575 8.870000e-17 99.0
27 TraesCS1B01G099700 chr5D 90.667 75 4 2 1 75 331118967 331119038 3.190000e-16 97.1
28 TraesCS1B01G099700 chr3D 78.076 707 132 13 3190 3879 391245055 391244355 3.580000e-115 425.0
29 TraesCS1B01G099700 chr3D 78.283 396 75 8 3155 3546 170708583 170708195 1.080000e-60 244.0
30 TraesCS1B01G099700 chr3D 97.500 80 1 1 1487 1565 299088258 299088337 6.760000e-28 135.0
31 TraesCS1B01G099700 chr3D 96.154 78 1 2 1920 1996 410422700 410422624 4.070000e-25 126.0
32 TraesCS1B01G099700 chr5A 77.273 748 136 15 3148 3879 595522854 595523583 3.610000e-110 409.0
33 TraesCS1B01G099700 chr5A 95.122 41 1 1 2915 2955 476397151 476397112 3.240000e-06 63.9
34 TraesCS1B01G099700 chr3B 75.200 625 136 18 3148 3764 725248207 725248820 1.060000e-70 278.0
35 TraesCS1B01G099700 chr3B 97.403 77 1 1 1917 1992 11978612 11978688 3.150000e-26 130.0
36 TraesCS1B01G099700 chr3B 87.778 90 5 5 1 90 113917127 113917044 2.470000e-17 100.0
37 TraesCS1B01G099700 chr2D 76.970 330 56 10 3153 3468 404407381 404407704 1.850000e-38 171.0
38 TraesCS1B01G099700 chr2D 90.698 86 7 1 3153 3238 54585792 54585876 3.170000e-21 113.0
39 TraesCS1B01G099700 chr2D 91.781 73 2 3 1 73 534925527 534925459 8.870000e-17 99.0
40 TraesCS1B01G099700 chr5B 78.824 255 45 8 3148 3398 482506908 482506659 3.100000e-36 163.0
41 TraesCS1B01G099700 chr5B 96.386 83 2 1 1484 1565 54712456 54712538 6.760000e-28 135.0
42 TraesCS1B01G099700 chr5B 90.000 80 3 4 1 80 140965992 140965918 8.870000e-17 99.0
43 TraesCS1B01G099700 chr7B 78.632 234 39 7 3149 3376 158910049 158910277 1.120000e-30 145.0
44 TraesCS1B01G099700 chr7B 98.649 74 1 0 1917 1990 400284182 400284255 8.740000e-27 132.0
45 TraesCS1B01G099700 chr6D 98.734 79 1 0 1487 1565 143491338 143491260 1.450000e-29 141.0
46 TraesCS1B01G099700 chr6D 97.500 80 1 1 1487 1565 143491433 143491354 6.760000e-28 135.0
47 TraesCS1B01G099700 chr6D 90.722 97 4 3 1900 1992 414790742 414790837 1.460000e-24 124.0
48 TraesCS1B01G099700 chr6D 91.209 91 7 1 1917 2007 379808982 379809071 5.260000e-24 122.0
49 TraesCS1B01G099700 chr6D 91.111 45 3 1 2915 2959 467811407 467811450 4.190000e-05 60.2
50 TraesCS1B01G099700 chr6A 98.734 79 1 0 1487 1565 234184336 234184258 1.450000e-29 141.0
51 TraesCS1B01G099700 chr6A 97.500 80 1 1 1487 1565 234184431 234184352 6.760000e-28 135.0
52 TraesCS1B01G099700 chr7A 97.500 80 1 1 1487 1565 693471360 693471281 6.760000e-28 135.0
53 TraesCS1B01G099700 chr7A 90.000 80 4 3 1 80 205175023 205175098 2.470000e-17 100.0
54 TraesCS1B01G099700 chr7A 92.857 42 2 1 2914 2955 731099043 731099083 4.190000e-05 60.2
55 TraesCS1B01G099700 chr7A 92.857 42 2 1 2914 2955 731131545 731131585 4.190000e-05 60.2
56 TraesCS1B01G099700 chr7A 92.857 42 2 1 2914 2955 731161253 731161293 4.190000e-05 60.2
57 TraesCS1B01G099700 chr7A 92.857 42 2 1 2914 2955 731190211 731190251 4.190000e-05 60.2
58 TraesCS1B01G099700 chr2B 97.500 80 1 1 1487 1565 117612509 117612588 6.760000e-28 135.0
59 TraesCS1B01G099700 chr4B 100.000 70 0 0 1920 1989 16602460 16602391 3.150000e-26 130.0
60 TraesCS1B01G099700 chr4B 93.976 83 2 2 1920 2002 595701788 595701709 5.260000e-24 122.0
61 TraesCS1B01G099700 chr4B 87.302 63 2 5 2934 2991 514045915 514045854 2.500000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G099700 chr1B 107136188 107140066 3878 False 7164.000 7164 100.00000 1 3879 1 chr1B.!!$F1 3878
1 TraesCS1B01G099700 chr1D 66570105 66570847 742 False 1002.000 1002 91.28700 3148 3879 1 chr1D.!!$F2 731
2 TraesCS1B01G099700 chr1D 66558690 66563531 4841 False 708.400 1506 92.67000 63 3155 5 chr1D.!!$F4 3092
3 TraesCS1B01G099700 chr1A 65265093 65268175 3082 False 730.225 1264 93.05375 63 3096 4 chr1A.!!$F3 3033
4 TraesCS1B01G099700 chr1A 61572430 61573147 717 False 370.000 370 76.64400 3153 3879 1 chr1A.!!$F1 726
5 TraesCS1B01G099700 chr3A 662120753 662121485 732 False 501.000 501 79.35200 3153 3879 1 chr3A.!!$F1 726
6 TraesCS1B01G099700 chr3A 21328542 21329141 599 True 435.000 435 79.83500 3277 3879 1 chr3A.!!$R1 602
7 TraesCS1B01G099700 chr4D 468405796 468406505 709 False 486.000 486 79.52600 3182 3879 1 chr4D.!!$F2 697
8 TraesCS1B01G099700 chr7D 139253043 139253762 719 False 464.000 464 78.65900 3153 3870 1 chr7D.!!$F1 717
9 TraesCS1B01G099700 chr5D 217945583 217946317 734 True 442.000 442 77.95700 3153 3879 1 chr5D.!!$R2 726
10 TraesCS1B01G099700 chr5D 287818405 287819049 644 False 407.000 407 78.38700 3232 3879 1 chr5D.!!$F1 647
11 TraesCS1B01G099700 chr3D 391244355 391245055 700 True 425.000 425 78.07600 3190 3879 1 chr3D.!!$R2 689
12 TraesCS1B01G099700 chr5A 595522854 595523583 729 False 409.000 409 77.27300 3148 3879 1 chr5A.!!$F1 731
13 TraesCS1B01G099700 chr3B 725248207 725248820 613 False 278.000 278 75.20000 3148 3764 1 chr3B.!!$F2 616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
642 650 0.100503 GTGCTTGCACGGTGAAAACT 59.899 50.0 13.29 0.0 0.00 2.66 F
1416 2910 0.390492 TGCTCGATAGACCCATGCAG 59.610 55.0 0.00 0.0 42.67 4.41 F
1662 3156 0.178967 TTCCATGTTGCAAGGAGCCA 60.179 50.0 0.00 0.0 44.83 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 3137 0.178967 TGGCTCCTTGCAACATGGAA 60.179 50.0 7.28 0.0 45.15 3.53 R
2592 4278 0.536260 AGCTGAGCTGATCACCTGAC 59.464 55.0 5.97 0.0 37.57 3.51 R
3017 5506 2.442212 TGTGAAAATGTGCCTGCATG 57.558 45.0 0.00 0.0 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
39 40 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
40 41 7.251994 ACTAAAGTAGTGATCTAAACGCTCTG 58.748 38.462 0.00 0.00 37.69 3.35
41 42 5.899120 AAGTAGTGATCTAAACGCTCTGA 57.101 39.130 0.00 0.00 0.00 3.27
42 43 6.458232 AAGTAGTGATCTAAACGCTCTGAT 57.542 37.500 0.00 0.00 0.00 2.90
43 44 7.569639 AAGTAGTGATCTAAACGCTCTGATA 57.430 36.000 0.00 0.00 0.00 2.15
44 45 7.753309 AGTAGTGATCTAAACGCTCTGATAT 57.247 36.000 0.00 0.00 0.00 1.63
45 46 8.172352 AGTAGTGATCTAAACGCTCTGATATT 57.828 34.615 0.00 0.00 0.00 1.28
46 47 8.634444 AGTAGTGATCTAAACGCTCTGATATTT 58.366 33.333 0.00 0.00 0.00 1.40
47 48 9.894783 GTAGTGATCTAAACGCTCTGATATTTA 57.105 33.333 0.00 0.00 0.00 1.40
48 49 8.804688 AGTGATCTAAACGCTCTGATATTTAC 57.195 34.615 0.00 0.00 0.00 2.01
49 50 8.634444 AGTGATCTAAACGCTCTGATATTTACT 58.366 33.333 0.00 0.00 0.00 2.24
50 51 9.250624 GTGATCTAAACGCTCTGATATTTACTT 57.749 33.333 0.00 0.00 0.00 2.24
59 60 9.900710 ACGCTCTGATATTTACTTATTACAGAG 57.099 33.333 0.85 0.85 46.94 3.35
60 61 9.347934 CGCTCTGATATTTACTTATTACAGAGG 57.652 37.037 18.05 8.22 45.44 3.69
61 62 9.646427 GCTCTGATATTTACTTATTACAGAGGG 57.354 37.037 18.05 1.06 45.44 4.30
109 110 3.144506 CATCTCCATGCATCCTTACACC 58.855 50.000 0.00 0.00 0.00 4.16
119 120 3.758554 GCATCCTTACACCATGTGAAACT 59.241 43.478 0.49 0.00 38.04 2.66
144 145 3.437395 TGTTGCAGTACGTTGTGAAACTT 59.563 39.130 17.24 0.00 38.04 2.66
231 232 2.896044 TCCTCTCTGGTATGCAGCATAG 59.104 50.000 15.81 6.33 37.07 2.23
265 266 3.756963 ACCTACATTTCGCCTCCTTTTTC 59.243 43.478 0.00 0.00 0.00 2.29
267 268 1.893137 ACATTTCGCCTCCTTTTTCCC 59.107 47.619 0.00 0.00 0.00 3.97
268 269 1.204704 CATTTCGCCTCCTTTTTCCCC 59.795 52.381 0.00 0.00 0.00 4.81
269 270 0.541063 TTTCGCCTCCTTTTTCCCCC 60.541 55.000 0.00 0.00 0.00 5.40
287 289 1.341209 CCCCCTCTTTCAGTGCAAAAC 59.659 52.381 0.00 0.00 0.00 2.43
411 413 2.289547 GAGGAGTCGAGAGCACTATGAC 59.710 54.545 7.62 7.62 34.14 3.06
422 424 2.230508 AGCACTATGACGTTTCCGAAGA 59.769 45.455 0.00 0.00 37.88 2.87
569 577 6.998968 AATGGATGATTCAACTCTGAAGAC 57.001 37.500 0.00 0.00 44.68 3.01
592 600 3.915437 AAAAGGCACGTTTGTATCCAG 57.085 42.857 0.00 0.00 38.83 3.86
596 604 5.347620 AAGGCACGTTTGTATCCAGTATA 57.652 39.130 0.00 0.00 0.00 1.47
638 646 1.891919 GGAGTGCTTGCACGGTGAA 60.892 57.895 18.32 0.00 0.00 3.18
642 650 0.100503 GTGCTTGCACGGTGAAAACT 59.899 50.000 13.29 0.00 0.00 2.66
643 651 0.814457 TGCTTGCACGGTGAAAACTT 59.186 45.000 13.29 0.00 0.00 2.66
652 660 5.006941 TGCACGGTGAAAACTTAGAGTAAAC 59.993 40.000 13.29 0.00 0.00 2.01
720 1877 7.398746 ACATACGACGATGTAACAATCAATTG 58.601 34.615 0.00 0.00 38.29 2.32
746 1903 9.202273 GAATATAGTATGCTTCTTTCTGGAGTG 57.798 37.037 0.00 0.00 0.00 3.51
756 1988 5.359194 TCTTTCTGGAGTGTTTCTTCTGT 57.641 39.130 0.00 0.00 0.00 3.41
761 1993 7.730364 TTCTGGAGTGTTTCTTCTGTATTTC 57.270 36.000 0.00 0.00 0.00 2.17
771 2003 8.227791 TGTTTCTTCTGTATTTCGCTACAAATC 58.772 33.333 0.00 0.00 31.50 2.17
833 2108 6.824305 TTCATGATCTTCCTTTGGTCTTTC 57.176 37.500 0.00 0.00 0.00 2.62
863 2325 4.155826 TGGCGATTCTTCAGGTATTTTGTG 59.844 41.667 0.00 0.00 0.00 3.33
892 2354 3.675225 CGTGTGTTTCTCTGTACATCTGG 59.325 47.826 0.00 0.00 0.00 3.86
901 2363 6.665992 TCTCTGTACATCTGGTTGTTAGTT 57.334 37.500 0.00 0.00 0.00 2.24
902 2364 6.455647 TCTCTGTACATCTGGTTGTTAGTTG 58.544 40.000 0.00 0.00 0.00 3.16
905 2367 5.676552 TGTACATCTGGTTGTTAGTTGTGT 58.323 37.500 0.00 0.00 32.20 3.72
906 2368 6.818233 TGTACATCTGGTTGTTAGTTGTGTA 58.182 36.000 0.00 0.00 32.20 2.90
907 2369 6.926826 TGTACATCTGGTTGTTAGTTGTGTAG 59.073 38.462 0.00 0.00 32.20 2.74
908 2370 6.169557 ACATCTGGTTGTTAGTTGTGTAGA 57.830 37.500 0.00 0.00 29.51 2.59
909 2371 6.769512 ACATCTGGTTGTTAGTTGTGTAGAT 58.230 36.000 0.00 0.00 29.51 1.98
910 2372 7.903145 ACATCTGGTTGTTAGTTGTGTAGATA 58.097 34.615 0.00 0.00 29.51 1.98
912 2374 8.820933 CATCTGGTTGTTAGTTGTGTAGATATG 58.179 37.037 0.00 0.00 0.00 1.78
950 2438 6.983307 GTGTAGATATGTTCAGATCAAGCAGT 59.017 38.462 9.54 0.00 0.00 4.40
954 2442 4.761235 ATGTTCAGATCAAGCAGTGTTG 57.239 40.909 0.00 0.00 0.00 3.33
972 2461 3.499537 TGTTGTTGTAGATGCTCTTGCTG 59.500 43.478 0.00 0.00 40.48 4.41
973 2462 2.703416 TGTTGTAGATGCTCTTGCTGG 58.297 47.619 0.00 0.00 40.48 4.85
977 2466 2.040278 TGTAGATGCTCTTGCTGGGTTT 59.960 45.455 0.00 0.00 40.48 3.27
978 2467 1.831580 AGATGCTCTTGCTGGGTTTC 58.168 50.000 0.00 0.00 40.48 2.78
979 2468 1.353694 AGATGCTCTTGCTGGGTTTCT 59.646 47.619 0.00 0.00 40.48 2.52
982 2471 3.611955 TGCTCTTGCTGGGTTTCTCCC 62.612 57.143 0.00 0.00 46.06 4.30
990 2481 2.189784 GGTTTCTCCCTAGGCCGC 59.810 66.667 2.05 0.00 0.00 6.53
1012 2503 3.039202 CTTCCAATGTCGTGCGGCC 62.039 63.158 0.00 0.00 0.00 6.13
1013 2504 3.834013 TTCCAATGTCGTGCGGCCA 62.834 57.895 2.24 0.00 0.00 5.36
1014 2505 3.803082 CCAATGTCGTGCGGCCAG 61.803 66.667 2.24 0.00 0.00 4.85
1132 2626 3.839432 CTTCGACCTCCTCCCGCC 61.839 72.222 0.00 0.00 0.00 6.13
1192 2686 2.048222 GCCTCGTAGCAGCACACA 60.048 61.111 0.00 0.00 0.00 3.72
1304 2798 3.756082 ATGCCTCTGTTATTTGGGGAA 57.244 42.857 0.00 0.00 0.00 3.97
1323 2817 5.629079 GGAATTTGTCCCTTGTGTCTTAG 57.371 43.478 0.00 0.00 41.10 2.18
1349 2843 4.040952 AGTTACCAGCAGATCTGTCAAGTT 59.959 41.667 23.38 6.74 41.25 2.66
1353 2847 3.436015 CCAGCAGATCTGTCAAGTTTCAG 59.564 47.826 23.38 1.85 41.25 3.02
1361 2855 4.009675 TCTGTCAAGTTTCAGCACACTTT 58.990 39.130 0.00 0.00 30.48 2.66
1371 2865 6.751888 AGTTTCAGCACACTTTAACATTTCAC 59.248 34.615 0.00 0.00 0.00 3.18
1410 2904 3.648009 CTCTTGATTGCTCGATAGACCC 58.352 50.000 0.00 0.00 42.67 4.46
1411 2905 3.031013 TCTTGATTGCTCGATAGACCCA 58.969 45.455 0.00 0.00 42.67 4.51
1412 2906 3.643320 TCTTGATTGCTCGATAGACCCAT 59.357 43.478 0.00 0.00 42.67 4.00
1413 2907 3.391506 TGATTGCTCGATAGACCCATG 57.608 47.619 0.00 0.00 42.67 3.66
1416 2910 0.390492 TGCTCGATAGACCCATGCAG 59.610 55.000 0.00 0.00 42.67 4.41
1424 2918 4.743651 CGATAGACCCATGCAGTGGTTAAT 60.744 45.833 10.96 7.92 43.00 1.40
1431 2925 3.129287 CCATGCAGTGGTTAATTCCTGAC 59.871 47.826 0.00 0.00 43.44 3.51
1432 2926 2.422597 TGCAGTGGTTAATTCCTGACG 58.577 47.619 0.00 0.00 0.00 4.35
1433 2927 2.037902 TGCAGTGGTTAATTCCTGACGA 59.962 45.455 0.00 0.00 0.00 4.20
1434 2928 3.270877 GCAGTGGTTAATTCCTGACGAT 58.729 45.455 0.00 0.00 0.00 3.73
1435 2929 3.063997 GCAGTGGTTAATTCCTGACGATG 59.936 47.826 0.00 0.00 0.00 3.84
1436 2930 3.623060 CAGTGGTTAATTCCTGACGATGG 59.377 47.826 0.00 0.00 0.00 3.51
1437 2931 3.263425 AGTGGTTAATTCCTGACGATGGT 59.737 43.478 0.00 0.00 0.00 3.55
1438 2932 3.374058 GTGGTTAATTCCTGACGATGGTG 59.626 47.826 0.00 0.00 0.00 4.17
1439 2933 3.008594 TGGTTAATTCCTGACGATGGTGT 59.991 43.478 0.00 0.00 0.00 4.16
1440 2934 4.223255 TGGTTAATTCCTGACGATGGTGTA 59.777 41.667 0.00 0.00 0.00 2.90
1441 2935 4.809426 GGTTAATTCCTGACGATGGTGTAG 59.191 45.833 0.00 0.00 0.00 2.74
1442 2936 5.394883 GGTTAATTCCTGACGATGGTGTAGA 60.395 44.000 0.00 0.00 0.00 2.59
1443 2937 4.819105 AATTCCTGACGATGGTGTAGAA 57.181 40.909 0.00 0.00 0.00 2.10
1444 2938 3.868757 TTCCTGACGATGGTGTAGAAG 57.131 47.619 0.00 0.00 0.00 2.85
1445 2939 3.081710 TCCTGACGATGGTGTAGAAGA 57.918 47.619 0.00 0.00 0.00 2.87
1446 2940 3.632333 TCCTGACGATGGTGTAGAAGAT 58.368 45.455 0.00 0.00 0.00 2.40
1447 2941 4.788679 TCCTGACGATGGTGTAGAAGATA 58.211 43.478 0.00 0.00 0.00 1.98
1448 2942 5.198207 TCCTGACGATGGTGTAGAAGATAA 58.802 41.667 0.00 0.00 0.00 1.75
1449 2943 5.655090 TCCTGACGATGGTGTAGAAGATAAA 59.345 40.000 0.00 0.00 0.00 1.40
1450 2944 6.323996 TCCTGACGATGGTGTAGAAGATAAAT 59.676 38.462 0.00 0.00 0.00 1.40
1451 2945 6.422100 CCTGACGATGGTGTAGAAGATAAATG 59.578 42.308 0.00 0.00 0.00 2.32
1452 2946 5.753438 TGACGATGGTGTAGAAGATAAATGC 59.247 40.000 0.00 0.00 0.00 3.56
1453 2947 4.745125 ACGATGGTGTAGAAGATAAATGCG 59.255 41.667 0.00 0.00 0.00 4.73
1454 2948 4.745125 CGATGGTGTAGAAGATAAATGCGT 59.255 41.667 0.00 0.00 0.00 5.24
1483 2977 4.431809 TCTGCAGTTTTTCACATTGGTTG 58.568 39.130 14.67 0.00 0.00 3.77
1484 2978 3.529533 TGCAGTTTTTCACATTGGTTGG 58.470 40.909 0.00 0.00 0.00 3.77
1488 2982 5.277442 GCAGTTTTTCACATTGGTTGGATTG 60.277 40.000 0.00 0.00 0.00 2.67
1491 2985 6.538381 AGTTTTTCACATTGGTTGGATTGTTC 59.462 34.615 0.00 0.00 0.00 3.18
1492 2986 3.913548 TCACATTGGTTGGATTGTTCG 57.086 42.857 0.00 0.00 0.00 3.95
1493 2987 2.556189 TCACATTGGTTGGATTGTTCGG 59.444 45.455 0.00 0.00 0.00 4.30
1494 2988 2.295909 CACATTGGTTGGATTGTTCGGT 59.704 45.455 0.00 0.00 0.00 4.69
1495 2989 2.962421 ACATTGGTTGGATTGTTCGGTT 59.038 40.909 0.00 0.00 0.00 4.44
1496 2990 3.243704 ACATTGGTTGGATTGTTCGGTTG 60.244 43.478 0.00 0.00 0.00 3.77
1497 2991 0.671251 TGGTTGGATTGTTCGGTTGC 59.329 50.000 0.00 0.00 0.00 4.17
1498 2992 0.671251 GGTTGGATTGTTCGGTTGCA 59.329 50.000 0.00 0.00 0.00 4.08
1499 2993 1.067821 GGTTGGATTGTTCGGTTGCAA 59.932 47.619 0.00 0.00 0.00 4.08
1500 2994 2.124122 GTTGGATTGTTCGGTTGCAAC 58.876 47.619 21.59 21.59 0.00 4.17
1501 2995 1.393603 TGGATTGTTCGGTTGCAACA 58.606 45.000 29.55 8.78 31.76 3.33
1502 2996 1.751351 TGGATTGTTCGGTTGCAACAA 59.249 42.857 29.55 16.84 45.43 2.83
1503 2997 2.166459 TGGATTGTTCGGTTGCAACAAA 59.834 40.909 29.55 19.90 44.73 2.83
1504 2998 3.190874 GGATTGTTCGGTTGCAACAAAA 58.809 40.909 29.55 19.56 44.73 2.44
1505 2999 3.807071 GGATTGTTCGGTTGCAACAAAAT 59.193 39.130 29.55 19.30 44.73 1.82
1506 3000 4.272261 GGATTGTTCGGTTGCAACAAAATT 59.728 37.500 29.55 9.05 44.73 1.82
1507 3001 4.590400 TTGTTCGGTTGCAACAAAATTG 57.410 36.364 29.55 12.26 40.08 2.32
1508 3002 3.849911 TGTTCGGTTGCAACAAAATTGA 58.150 36.364 29.55 14.18 30.67 2.57
1509 3003 4.245660 TGTTCGGTTGCAACAAAATTGAA 58.754 34.783 29.55 18.46 30.67 2.69
1510 3004 4.328440 TGTTCGGTTGCAACAAAATTGAAG 59.672 37.500 29.55 9.67 30.67 3.02
1511 3005 3.452474 TCGGTTGCAACAAAATTGAAGG 58.548 40.909 29.55 6.52 0.00 3.46
1512 3006 2.543430 CGGTTGCAACAAAATTGAAGGG 59.457 45.455 29.55 1.64 0.00 3.95
1513 3007 2.877786 GGTTGCAACAAAATTGAAGGGG 59.122 45.455 29.55 0.00 0.00 4.79
1514 3008 3.432890 GGTTGCAACAAAATTGAAGGGGA 60.433 43.478 29.55 0.00 0.00 4.81
1515 3009 4.388485 GTTGCAACAAAATTGAAGGGGAT 58.612 39.130 24.52 0.00 0.00 3.85
1516 3010 4.703379 TGCAACAAAATTGAAGGGGATT 57.297 36.364 0.00 0.00 0.00 3.01
1517 3011 4.387598 TGCAACAAAATTGAAGGGGATTG 58.612 39.130 0.00 0.00 0.00 2.67
1518 3012 4.102210 TGCAACAAAATTGAAGGGGATTGA 59.898 37.500 0.00 0.00 0.00 2.57
1519 3013 5.062528 GCAACAAAATTGAAGGGGATTGAA 58.937 37.500 0.00 0.00 0.00 2.69
1520 3014 5.179929 GCAACAAAATTGAAGGGGATTGAAG 59.820 40.000 0.00 0.00 0.00 3.02
1521 3015 6.290605 CAACAAAATTGAAGGGGATTGAAGT 58.709 36.000 0.00 0.00 0.00 3.01
1522 3016 5.857268 ACAAAATTGAAGGGGATTGAAGTG 58.143 37.500 0.00 0.00 0.00 3.16
1523 3017 5.221702 ACAAAATTGAAGGGGATTGAAGTGG 60.222 40.000 0.00 0.00 0.00 4.00
1524 3018 4.402616 AATTGAAGGGGATTGAAGTGGA 57.597 40.909 0.00 0.00 0.00 4.02
1525 3019 4.614967 ATTGAAGGGGATTGAAGTGGAT 57.385 40.909 0.00 0.00 0.00 3.41
1526 3020 4.402616 TTGAAGGGGATTGAAGTGGATT 57.597 40.909 0.00 0.00 0.00 3.01
1527 3021 3.700538 TGAAGGGGATTGAAGTGGATTG 58.299 45.455 0.00 0.00 0.00 2.67
1528 3022 2.834638 AGGGGATTGAAGTGGATTGG 57.165 50.000 0.00 0.00 0.00 3.16
1529 3023 1.288932 AGGGGATTGAAGTGGATTGGG 59.711 52.381 0.00 0.00 0.00 4.12
1530 3024 1.689258 GGGGATTGAAGTGGATTGGGG 60.689 57.143 0.00 0.00 0.00 4.96
1531 3025 1.007118 GGGATTGAAGTGGATTGGGGT 59.993 52.381 0.00 0.00 0.00 4.95
1532 3026 2.102578 GGATTGAAGTGGATTGGGGTG 58.897 52.381 0.00 0.00 0.00 4.61
1533 3027 2.102578 GATTGAAGTGGATTGGGGTGG 58.897 52.381 0.00 0.00 0.00 4.61
1534 3028 1.153539 TTGAAGTGGATTGGGGTGGA 58.846 50.000 0.00 0.00 0.00 4.02
1535 3029 1.381867 TGAAGTGGATTGGGGTGGAT 58.618 50.000 0.00 0.00 0.00 3.41
1536 3030 1.715931 TGAAGTGGATTGGGGTGGATT 59.284 47.619 0.00 0.00 0.00 3.01
1537 3031 2.922955 TGAAGTGGATTGGGGTGGATTA 59.077 45.455 0.00 0.00 0.00 1.75
1538 3032 3.335183 TGAAGTGGATTGGGGTGGATTAA 59.665 43.478 0.00 0.00 0.00 1.40
1539 3033 4.202727 TGAAGTGGATTGGGGTGGATTAAA 60.203 41.667 0.00 0.00 0.00 1.52
1540 3034 4.625225 AGTGGATTGGGGTGGATTAAAT 57.375 40.909 0.00 0.00 0.00 1.40
1541 3035 4.546674 AGTGGATTGGGGTGGATTAAATC 58.453 43.478 0.00 0.00 0.00 2.17
1562 3056 8.655935 AAATCCCATAAAAGTCAAATCTCACT 57.344 30.769 0.00 0.00 0.00 3.41
1563 3057 7.872113 ATCCCATAAAAGTCAAATCTCACTC 57.128 36.000 0.00 0.00 0.00 3.51
1564 3058 6.778821 TCCCATAAAAGTCAAATCTCACTCA 58.221 36.000 0.00 0.00 0.00 3.41
1565 3059 6.655003 TCCCATAAAAGTCAAATCTCACTCAC 59.345 38.462 0.00 0.00 0.00 3.51
1566 3060 6.127897 CCCATAAAAGTCAAATCTCACTCACC 60.128 42.308 0.00 0.00 0.00 4.02
1567 3061 6.127897 CCATAAAAGTCAAATCTCACTCACCC 60.128 42.308 0.00 0.00 0.00 4.61
1568 3062 3.425162 AAGTCAAATCTCACTCACCCC 57.575 47.619 0.00 0.00 0.00 4.95
1569 3063 1.630878 AGTCAAATCTCACTCACCCCC 59.369 52.381 0.00 0.00 0.00 5.40
1570 3064 1.351017 GTCAAATCTCACTCACCCCCA 59.649 52.381 0.00 0.00 0.00 4.96
1571 3065 1.351017 TCAAATCTCACTCACCCCCAC 59.649 52.381 0.00 0.00 0.00 4.61
1572 3066 0.698818 AAATCTCACTCACCCCCACC 59.301 55.000 0.00 0.00 0.00 4.61
1573 3067 1.208165 AATCTCACTCACCCCCACCC 61.208 60.000 0.00 0.00 0.00 4.61
1574 3068 2.415962 ATCTCACTCACCCCCACCCA 62.416 60.000 0.00 0.00 0.00 4.51
1575 3069 2.852075 TCACTCACCCCCACCCAC 60.852 66.667 0.00 0.00 0.00 4.61
1576 3070 3.966543 CACTCACCCCCACCCACC 61.967 72.222 0.00 0.00 0.00 4.61
1585 3079 4.263572 CCACCCACCCGCACAGAA 62.264 66.667 0.00 0.00 0.00 3.02
1586 3080 2.669569 CACCCACCCGCACAGAAG 60.670 66.667 0.00 0.00 0.00 2.85
1587 3081 2.847234 ACCCACCCGCACAGAAGA 60.847 61.111 0.00 0.00 0.00 2.87
1588 3082 2.046892 CCCACCCGCACAGAAGAG 60.047 66.667 0.00 0.00 0.00 2.85
1589 3083 2.046892 CCACCCGCACAGAAGAGG 60.047 66.667 0.00 0.00 0.00 3.69
1590 3084 2.743718 CACCCGCACAGAAGAGGT 59.256 61.111 0.00 0.00 0.00 3.85
1591 3085 1.071471 CACCCGCACAGAAGAGGTT 59.929 57.895 0.00 0.00 0.00 3.50
1592 3086 0.535102 CACCCGCACAGAAGAGGTTT 60.535 55.000 0.00 0.00 0.00 3.27
1593 3087 1.053424 ACCCGCACAGAAGAGGTTTA 58.947 50.000 0.00 0.00 0.00 2.01
1594 3088 1.418637 ACCCGCACAGAAGAGGTTTAA 59.581 47.619 0.00 0.00 0.00 1.52
1595 3089 1.804748 CCCGCACAGAAGAGGTTTAAC 59.195 52.381 0.00 0.00 0.00 2.01
1596 3090 2.550208 CCCGCACAGAAGAGGTTTAACT 60.550 50.000 0.00 0.00 0.00 2.24
1597 3091 2.480419 CCGCACAGAAGAGGTTTAACTG 59.520 50.000 0.00 0.00 35.14 3.16
1598 3092 3.390135 CGCACAGAAGAGGTTTAACTGA 58.610 45.455 0.00 0.00 33.53 3.41
1599 3093 3.807622 CGCACAGAAGAGGTTTAACTGAA 59.192 43.478 0.00 0.00 33.53 3.02
1600 3094 4.452455 CGCACAGAAGAGGTTTAACTGAAT 59.548 41.667 0.00 0.00 33.53 2.57
1601 3095 5.637810 CGCACAGAAGAGGTTTAACTGAATA 59.362 40.000 0.00 0.00 33.53 1.75
1602 3096 6.147164 CGCACAGAAGAGGTTTAACTGAATAA 59.853 38.462 0.00 0.00 33.53 1.40
1603 3097 7.522374 GCACAGAAGAGGTTTAACTGAATAAG 58.478 38.462 0.00 0.00 33.53 1.73
1604 3098 7.361286 GCACAGAAGAGGTTTAACTGAATAAGG 60.361 40.741 0.00 0.00 33.53 2.69
1605 3099 6.655425 ACAGAAGAGGTTTAACTGAATAAGGC 59.345 38.462 0.00 0.00 33.53 4.35
1606 3100 6.094186 CAGAAGAGGTTTAACTGAATAAGGCC 59.906 42.308 0.00 0.00 0.00 5.19
1607 3101 5.780958 AGAGGTTTAACTGAATAAGGCCT 57.219 39.130 0.00 0.00 0.00 5.19
1608 3102 6.886178 AGAGGTTTAACTGAATAAGGCCTA 57.114 37.500 5.16 0.00 0.00 3.93
1609 3103 7.266905 AGAGGTTTAACTGAATAAGGCCTAA 57.733 36.000 5.16 0.00 0.00 2.69
1610 3104 7.110810 AGAGGTTTAACTGAATAAGGCCTAAC 58.889 38.462 5.16 1.87 0.00 2.34
1611 3105 7.029053 AGGTTTAACTGAATAAGGCCTAACT 57.971 36.000 5.16 0.00 0.00 2.24
1612 3106 6.884836 AGGTTTAACTGAATAAGGCCTAACTG 59.115 38.462 5.16 4.79 0.00 3.16
1613 3107 6.095021 GGTTTAACTGAATAAGGCCTAACTGG 59.905 42.308 5.16 0.00 39.35 4.00
1614 3108 6.630203 TTAACTGAATAAGGCCTAACTGGA 57.370 37.500 5.16 0.00 38.35 3.86
1615 3109 5.717119 AACTGAATAAGGCCTAACTGGAT 57.283 39.130 5.16 0.00 38.35 3.41
1616 3110 5.717119 ACTGAATAAGGCCTAACTGGATT 57.283 39.130 5.16 0.00 38.35 3.01
1617 3111 5.440610 ACTGAATAAGGCCTAACTGGATTG 58.559 41.667 5.16 0.00 38.35 2.67
1618 3112 5.191722 ACTGAATAAGGCCTAACTGGATTGA 59.808 40.000 5.16 0.00 38.35 2.57
1619 3113 5.437060 TGAATAAGGCCTAACTGGATTGAC 58.563 41.667 5.16 0.00 38.35 3.18
1628 3122 4.656112 CCTAACTGGATTGACCTCATACCT 59.344 45.833 0.00 0.00 39.86 3.08
1643 3137 5.482908 CTCATACCTAGTTGAGCACAAGTT 58.517 41.667 9.56 0.00 39.86 2.66
1659 3153 3.068590 ACAAGTTTCCATGTTGCAAGGAG 59.931 43.478 0.00 0.00 32.72 3.69
1661 3155 0.968405 TTTCCATGTTGCAAGGAGCC 59.032 50.000 0.00 0.00 44.83 4.70
1662 3156 0.178967 TTCCATGTTGCAAGGAGCCA 60.179 50.000 0.00 0.00 44.83 4.75
1663 3157 0.178967 TCCATGTTGCAAGGAGCCAA 60.179 50.000 0.00 0.00 44.83 4.52
1664 3158 0.680618 CCATGTTGCAAGGAGCCAAA 59.319 50.000 0.00 0.00 44.83 3.28
1665 3159 1.337447 CCATGTTGCAAGGAGCCAAAG 60.337 52.381 0.00 0.00 44.83 2.77
1666 3160 1.614903 CATGTTGCAAGGAGCCAAAGA 59.385 47.619 0.00 0.00 44.83 2.52
1667 3161 1.774110 TGTTGCAAGGAGCCAAAGAA 58.226 45.000 0.00 0.00 44.83 2.52
1668 3162 2.318908 TGTTGCAAGGAGCCAAAGAAT 58.681 42.857 0.00 0.00 44.83 2.40
1669 3163 2.036217 TGTTGCAAGGAGCCAAAGAATG 59.964 45.455 0.00 0.00 44.83 2.67
1670 3164 1.999648 TGCAAGGAGCCAAAGAATGT 58.000 45.000 0.00 0.00 44.83 2.71
1676 3170 5.644644 CAAGGAGCCAAAGAATGTATCAAC 58.355 41.667 0.00 0.00 0.00 3.18
1686 3180 4.759782 AGAATGTATCAACTTCCTGGACG 58.240 43.478 0.00 0.00 0.00 4.79
1687 3181 4.466370 AGAATGTATCAACTTCCTGGACGA 59.534 41.667 7.25 0.00 0.00 4.20
1697 3216 2.472695 TCCTGGACGAATGGACTTTG 57.527 50.000 0.00 0.00 0.00 2.77
1706 3225 5.642063 GGACGAATGGACTTTGTCTGAAATA 59.358 40.000 0.00 0.00 44.62 1.40
1718 3237 6.773976 TTGTCTGAAATATTAAGGGGCTTG 57.226 37.500 0.00 0.00 0.00 4.01
1722 3241 6.262496 GTCTGAAATATTAAGGGGCTTGGTAC 59.738 42.308 0.00 0.00 0.00 3.34
1742 3263 6.332635 TGGTACTTTGGGATCTTGATGGATAT 59.667 38.462 0.00 0.00 0.00 1.63
1765 3286 4.515191 TGATAGCACAAGGTTTGAAGTCAC 59.485 41.667 0.00 0.00 0.00 3.67
1774 3295 4.327680 AGGTTTGAAGTCACAGATTAGCC 58.672 43.478 0.00 0.00 0.00 3.93
1794 3360 3.058085 GCCGAGAGCCTGTTAGATAGTAC 60.058 52.174 0.00 0.00 34.35 2.73
1796 3362 4.453136 CCGAGAGCCTGTTAGATAGTACTC 59.547 50.000 0.00 0.00 0.00 2.59
1800 3366 6.066032 AGAGCCTGTTAGATAGTACTCCTTC 58.934 44.000 0.00 0.00 0.00 3.46
1878 3551 0.395586 TGCAGCCCTTTGTGAGTTGT 60.396 50.000 0.00 0.00 0.00 3.32
1882 3555 2.024414 AGCCCTTTGTGAGTTGTTGAC 58.976 47.619 0.00 0.00 0.00 3.18
1883 3556 1.268539 GCCCTTTGTGAGTTGTTGACG 60.269 52.381 0.00 0.00 0.00 4.35
1884 3557 2.285083 CCCTTTGTGAGTTGTTGACGA 58.715 47.619 0.00 0.00 0.00 4.20
1885 3558 2.031683 CCCTTTGTGAGTTGTTGACGAC 59.968 50.000 0.00 0.00 0.00 4.34
1895 3568 4.369182 AGTTGTTGACGACTCTAAACTGG 58.631 43.478 0.00 0.00 35.78 4.00
1896 3569 4.117685 GTTGTTGACGACTCTAAACTGGT 58.882 43.478 0.00 0.00 0.00 4.00
1897 3570 5.068198 AGTTGTTGACGACTCTAAACTGGTA 59.932 40.000 0.00 0.00 35.78 3.25
1898 3571 5.717078 TGTTGACGACTCTAAACTGGTAT 57.283 39.130 0.00 0.00 0.00 2.73
1899 3572 5.706916 TGTTGACGACTCTAAACTGGTATC 58.293 41.667 0.00 0.00 0.00 2.24
1900 3573 5.242171 TGTTGACGACTCTAAACTGGTATCA 59.758 40.000 0.00 0.00 0.00 2.15
1901 3574 5.970317 TGACGACTCTAAACTGGTATCAA 57.030 39.130 0.00 0.00 0.00 2.57
1902 3575 6.335471 TGACGACTCTAAACTGGTATCAAA 57.665 37.500 0.00 0.00 0.00 2.69
1903 3576 6.751157 TGACGACTCTAAACTGGTATCAAAA 58.249 36.000 0.00 0.00 0.00 2.44
1904 3577 7.383687 TGACGACTCTAAACTGGTATCAAAAT 58.616 34.615 0.00 0.00 0.00 1.82
1905 3578 8.525316 TGACGACTCTAAACTGGTATCAAAATA 58.475 33.333 0.00 0.00 0.00 1.40
1906 3579 8.928270 ACGACTCTAAACTGGTATCAAAATAG 57.072 34.615 0.00 0.00 0.00 1.73
1907 3580 8.746530 ACGACTCTAAACTGGTATCAAAATAGA 58.253 33.333 0.00 0.00 0.00 1.98
1908 3581 9.751542 CGACTCTAAACTGGTATCAAAATAGAT 57.248 33.333 0.00 0.00 0.00 1.98
1915 3588 9.739276 AAACTGGTATCAAAATAGATGACTCAA 57.261 29.630 0.00 0.00 0.00 3.02
1916 3589 8.723942 ACTGGTATCAAAATAGATGACTCAAC 57.276 34.615 0.00 0.00 0.00 3.18
1917 3590 8.321353 ACTGGTATCAAAATAGATGACTCAACA 58.679 33.333 0.00 0.00 0.00 3.33
1918 3591 8.492673 TGGTATCAAAATAGATGACTCAACAC 57.507 34.615 0.00 0.00 0.00 3.32
1919 3592 8.100164 TGGTATCAAAATAGATGACTCAACACA 58.900 33.333 0.00 0.00 0.00 3.72
1920 3593 8.946085 GGTATCAAAATAGATGACTCAACACAA 58.054 33.333 0.00 0.00 0.00 3.33
1924 3597 9.942850 TCAAAATAGATGACTCAACACAATAGA 57.057 29.630 0.00 0.00 0.00 1.98
1928 3601 9.539825 AATAGATGACTCAACACAATAGATGAC 57.460 33.333 0.00 0.00 0.00 3.06
1929 3602 7.180322 AGATGACTCAACACAATAGATGACT 57.820 36.000 0.00 0.00 0.00 3.41
1930 3603 7.264221 AGATGACTCAACACAATAGATGACTC 58.736 38.462 0.00 0.00 0.00 3.36
1931 3604 6.345096 TGACTCAACACAATAGATGACTCA 57.655 37.500 0.00 0.00 0.00 3.41
1932 3605 6.758254 TGACTCAACACAATAGATGACTCAA 58.242 36.000 0.00 0.00 0.00 3.02
1933 3606 6.646653 TGACTCAACACAATAGATGACTCAAC 59.353 38.462 0.00 0.00 0.00 3.18
1934 3607 6.763355 ACTCAACACAATAGATGACTCAACT 58.237 36.000 0.00 0.00 0.00 3.16
1935 3608 7.220030 ACTCAACACAATAGATGACTCAACTT 58.780 34.615 0.00 0.00 0.00 2.66
1936 3609 7.716998 ACTCAACACAATAGATGACTCAACTTT 59.283 33.333 0.00 0.00 0.00 2.66
1937 3610 7.864686 TCAACACAATAGATGACTCAACTTTG 58.135 34.615 0.00 2.99 0.00 2.77
1938 3611 7.498900 TCAACACAATAGATGACTCAACTTTGT 59.501 33.333 0.00 3.51 0.00 2.83
1939 3612 8.773645 CAACACAATAGATGACTCAACTTTGTA 58.226 33.333 12.30 0.00 0.00 2.41
1940 3613 8.311650 ACACAATAGATGACTCAACTTTGTAC 57.688 34.615 12.30 0.00 0.00 2.90
1941 3614 8.150945 ACACAATAGATGACTCAACTTTGTACT 58.849 33.333 12.30 0.00 0.00 2.73
1942 3615 9.639601 CACAATAGATGACTCAACTTTGTACTA 57.360 33.333 12.30 0.00 0.00 1.82
1978 3651 8.970691 AAAATTGAGTCATCTATTTTGGAACG 57.029 30.769 11.47 0.00 44.08 3.95
1979 3652 6.683974 ATTGAGTCATCTATTTTGGAACGG 57.316 37.500 0.00 0.00 0.00 4.44
1980 3653 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1981 3654 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1982 3655 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1983 3656 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1984 3657 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1999 3672 6.651975 ACGGAGGGAGTATCTTACAATAAG 57.348 41.667 0.00 0.00 33.73 1.73
2009 3682 9.495754 GAGTATCTTACAATAAGCTTGCAAAAG 57.504 33.333 9.86 6.63 0.00 2.27
2031 3704 9.529325 AAAAGTTTAAAAGTTCCTTATCAGTGC 57.471 29.630 0.00 0.00 0.00 4.40
2040 3713 2.434336 TCCTTATCAGTGCGGCTATGTT 59.566 45.455 0.00 0.00 0.00 2.71
2041 3714 2.545526 CCTTATCAGTGCGGCTATGTTG 59.454 50.000 0.00 0.00 0.00 3.33
2042 3715 2.238942 TATCAGTGCGGCTATGTTGG 57.761 50.000 0.00 0.00 0.00 3.77
2043 3716 0.541392 ATCAGTGCGGCTATGTTGGA 59.459 50.000 0.00 0.00 0.00 3.53
2044 3717 0.323302 TCAGTGCGGCTATGTTGGAA 59.677 50.000 0.00 0.00 0.00 3.53
2045 3718 0.447801 CAGTGCGGCTATGTTGGAAC 59.552 55.000 0.00 0.00 0.00 3.62
2046 3719 0.324943 AGTGCGGCTATGTTGGAACT 59.675 50.000 0.00 0.00 0.00 3.01
2060 3733 1.133513 TGGAACTGGAAACTGCATGGT 60.134 47.619 0.00 0.00 0.00 3.55
2074 3754 5.509498 ACTGCATGGTATCTATTGGTTGTT 58.491 37.500 0.00 0.00 0.00 2.83
2112 3792 7.039313 ACTGAAGTTGAAAATTAACACCCTC 57.961 36.000 0.00 0.00 0.00 4.30
2113 3793 6.040504 ACTGAAGTTGAAAATTAACACCCTCC 59.959 38.462 0.00 0.00 0.00 4.30
2114 3794 5.303333 TGAAGTTGAAAATTAACACCCTCCC 59.697 40.000 0.00 0.00 0.00 4.30
2115 3795 4.157246 AGTTGAAAATTAACACCCTCCCC 58.843 43.478 0.00 0.00 0.00 4.81
2116 3796 3.178412 TGAAAATTAACACCCTCCCCC 57.822 47.619 0.00 0.00 0.00 5.40
2153 3833 2.529780 TTTCGCCTCGTTGTTCCTTA 57.470 45.000 0.00 0.00 0.00 2.69
2166 3846 5.562113 CGTTGTTCCTTATTTGGTTCCACTC 60.562 44.000 0.00 0.00 0.00 3.51
2218 3898 3.895041 ACTTTCAAATTCCACCGTCCAAT 59.105 39.130 0.00 0.00 0.00 3.16
2261 3941 6.116126 AGGAATTAAGGTTGTACAGATGCTC 58.884 40.000 0.00 0.00 0.00 4.26
2262 3942 5.880332 GGAATTAAGGTTGTACAGATGCTCA 59.120 40.000 0.00 0.00 0.00 4.26
2263 3943 6.183360 GGAATTAAGGTTGTACAGATGCTCAC 60.183 42.308 0.00 0.00 0.00 3.51
2264 3944 5.483685 TTAAGGTTGTACAGATGCTCACT 57.516 39.130 0.00 0.00 0.00 3.41
2265 3945 3.601443 AGGTTGTACAGATGCTCACTC 57.399 47.619 0.00 0.00 0.00 3.51
2267 3947 3.324846 AGGTTGTACAGATGCTCACTCAA 59.675 43.478 0.00 0.00 0.00 3.02
2269 3949 4.153117 GGTTGTACAGATGCTCACTCAAAG 59.847 45.833 0.00 0.00 0.00 2.77
2271 3951 5.411831 TGTACAGATGCTCACTCAAAGAT 57.588 39.130 0.00 0.00 0.00 2.40
2278 3964 6.257411 CAGATGCTCACTCAAAGATAATCGTT 59.743 38.462 0.00 0.00 0.00 3.85
2311 3997 1.971167 TCGCCACCCTGCATTTGTC 60.971 57.895 0.00 0.00 0.00 3.18
2356 4042 6.490534 GGTGAAATATGAAGCTAGTTTCAGC 58.509 40.000 23.74 17.88 44.56 4.26
2403 4089 5.880332 TGTAGTAGAATTGGCCATTCAGTTC 59.120 40.000 22.09 14.90 43.63 3.01
2461 4147 0.592637 TGTGGCAGTTTTCTCATGCG 59.407 50.000 0.00 0.00 40.90 4.73
2490 4176 3.799420 GCTTGTATGCTGTAGTAGAGTGC 59.201 47.826 0.00 0.00 0.00 4.40
2592 4278 7.436673 CGATAGAGTTCAACTTTCCTCCTAATG 59.563 40.741 0.00 0.00 39.76 1.90
2663 4349 4.966965 TGGAGAGTGAGTAAATCGTCTC 57.033 45.455 0.00 0.00 38.81 3.36
2707 4393 8.786898 CCTCATGAACTCAAAAATACTCTTTCA 58.213 33.333 0.00 0.00 0.00 2.69
2779 4465 2.073117 TCGCAGCTCGTAAATTGTCA 57.927 45.000 5.66 0.00 39.67 3.58
2936 4623 7.784470 ACTACTCCCTCTGATCCATATTAAC 57.216 40.000 0.00 0.00 0.00 2.01
2980 4667 9.214957 CTAAAGCGGTGACAATTAATATGGATA 57.785 33.333 0.00 0.00 0.00 2.59
2981 4668 8.635765 AAAGCGGTGACAATTAATATGGATAT 57.364 30.769 0.00 0.00 0.00 1.63
3001 5490 9.268282 TGGATATGAGGGAGTAGGTTATAATTC 57.732 37.037 0.00 0.00 0.00 2.17
3309 5812 4.143543 TGAAACAGTGATGATGCAGGAAA 58.856 39.130 0.00 0.00 0.00 3.13
3347 5852 2.048127 GCGGAGGAGCACGTTCTT 60.048 61.111 0.00 0.00 37.05 2.52
3412 5917 2.495270 ACAGTGCACACAACCATTTGAA 59.505 40.909 21.04 0.00 36.48 2.69
3579 6086 6.070767 TGTCGTAGGAAAGATTGGATTCTCTT 60.071 38.462 0.00 0.00 33.19 2.85
3610 6118 2.632643 GCATGGCTGGATGCGAATA 58.367 52.632 0.00 0.00 44.05 1.75
3739 6251 3.165875 TGGACCTTGGTACTTGAGAGAG 58.834 50.000 3.45 0.00 0.00 3.20
3827 6339 5.363101 TCAGATCTCTTGATTGTATGCACC 58.637 41.667 0.00 0.00 32.19 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
15 16 7.120873 TCAGAGCGTTTAGATCACTACTTTAGT 59.879 37.037 0.00 0.00 37.82 2.24
16 17 7.473366 TCAGAGCGTTTAGATCACTACTTTAG 58.527 38.462 0.00 0.00 37.82 1.85
17 18 7.387119 TCAGAGCGTTTAGATCACTACTTTA 57.613 36.000 0.00 0.00 37.82 1.85
18 19 6.268825 TCAGAGCGTTTAGATCACTACTTT 57.731 37.500 0.00 0.00 37.82 2.66
19 20 5.899120 TCAGAGCGTTTAGATCACTACTT 57.101 39.130 0.00 0.00 37.82 2.24
20 21 7.753309 ATATCAGAGCGTTTAGATCACTACT 57.247 36.000 0.00 0.00 37.82 2.57
21 22 8.804688 AAATATCAGAGCGTTTAGATCACTAC 57.195 34.615 0.00 0.00 37.82 2.73
22 23 9.894783 GTAAATATCAGAGCGTTTAGATCACTA 57.105 33.333 0.00 0.00 37.82 2.74
23 24 8.634444 AGTAAATATCAGAGCGTTTAGATCACT 58.366 33.333 0.00 0.00 37.82 3.41
24 25 8.804688 AGTAAATATCAGAGCGTTTAGATCAC 57.195 34.615 0.00 0.00 37.82 3.06
33 34 9.900710 CTCTGTAATAAGTAAATATCAGAGCGT 57.099 33.333 0.00 0.00 40.28 5.07
34 35 9.347934 CCTCTGTAATAAGTAAATATCAGAGCG 57.652 37.037 11.72 4.13 43.24 5.03
35 36 9.646427 CCCTCTGTAATAAGTAAATATCAGAGC 57.354 37.037 11.72 0.00 43.24 4.09
45 46 9.804977 GATAGGTACTCCCTCTGTAATAAGTAA 57.195 37.037 0.00 0.00 44.81 2.24
46 47 9.180282 AGATAGGTACTCCCTCTGTAATAAGTA 57.820 37.037 0.00 0.00 44.81 2.24
47 48 8.059565 AGATAGGTACTCCCTCTGTAATAAGT 57.940 38.462 0.00 0.00 44.81 2.24
53 54 9.347777 TGAATATAGATAGGTACTCCCTCTGTA 57.652 37.037 0.00 0.00 44.81 2.74
54 55 8.233349 TGAATATAGATAGGTACTCCCTCTGT 57.767 38.462 0.00 0.00 44.81 3.41
55 56 9.349713 GATGAATATAGATAGGTACTCCCTCTG 57.650 40.741 0.00 0.00 44.81 3.35
56 57 8.215050 CGATGAATATAGATAGGTACTCCCTCT 58.785 40.741 0.00 0.00 44.81 3.69
57 58 7.040961 GCGATGAATATAGATAGGTACTCCCTC 60.041 44.444 0.00 0.00 44.81 4.30
59 60 6.773685 AGCGATGAATATAGATAGGTACTCCC 59.226 42.308 0.00 0.00 41.75 4.30
60 61 7.644490 CAGCGATGAATATAGATAGGTACTCC 58.356 42.308 0.00 0.00 41.75 3.85
61 62 7.136119 GCAGCGATGAATATAGATAGGTACTC 58.864 42.308 4.02 0.00 41.75 2.59
109 110 3.772932 ACTGCAACACAAGTTTCACATG 58.227 40.909 0.00 0.00 35.28 3.21
119 120 2.347731 TCACAACGTACTGCAACACAA 58.652 42.857 0.00 0.00 0.00 3.33
144 145 1.243342 CGGTTTGCCCTGATTGCTCA 61.243 55.000 0.00 0.00 0.00 4.26
231 232 2.781681 ATGTAGGTGGTGTAAGGTGC 57.218 50.000 0.00 0.00 0.00 5.01
267 268 1.341209 GTTTTGCACTGAAAGAGGGGG 59.659 52.381 0.00 0.00 37.43 5.40
268 269 2.310538 AGTTTTGCACTGAAAGAGGGG 58.689 47.619 0.00 0.00 37.43 4.79
269 270 3.709987 CAAGTTTTGCACTGAAAGAGGG 58.290 45.455 0.00 0.00 35.12 4.30
287 289 0.245539 CTGCAAGGGTTCATGGCAAG 59.754 55.000 0.00 0.00 33.58 4.01
422 424 4.613925 TCTAGGATACGTACGTGGAGAT 57.386 45.455 30.25 15.92 46.39 2.75
592 600 6.980978 TCTTCATTAGACAGCAACAGCTATAC 59.019 38.462 0.00 0.00 36.70 1.47
596 604 4.277515 TCTTCATTAGACAGCAACAGCT 57.722 40.909 0.00 0.00 39.75 4.24
608 616 4.397103 TGCAAGCACTCCATTCTTCATTAG 59.603 41.667 0.00 0.00 0.00 1.73
638 646 5.883673 TGTGTTGCCTGTTTACTCTAAGTTT 59.116 36.000 0.00 0.00 0.00 2.66
642 650 4.759693 CCATGTGTTGCCTGTTTACTCTAA 59.240 41.667 0.00 0.00 0.00 2.10
643 651 4.202419 ACCATGTGTTGCCTGTTTACTCTA 60.202 41.667 0.00 0.00 0.00 2.43
652 660 3.724508 TTACAAACCATGTGTTGCCTG 57.275 42.857 5.70 2.10 43.77 4.85
695 1852 7.276878 TCAATTGATTGTTACATCGTCGTATGT 59.723 33.333 3.38 12.68 39.71 2.29
720 1877 9.202273 CACTCCAGAAAGAAGCATACTATATTC 57.798 37.037 0.00 0.00 0.00 1.75
727 1884 5.703130 AGAAACACTCCAGAAAGAAGCATAC 59.297 40.000 0.00 0.00 0.00 2.39
728 1885 5.869579 AGAAACACTCCAGAAAGAAGCATA 58.130 37.500 0.00 0.00 0.00 3.14
729 1886 4.723309 AGAAACACTCCAGAAAGAAGCAT 58.277 39.130 0.00 0.00 0.00 3.79
746 1903 7.422746 CGATTTGTAGCGAAATACAGAAGAAAC 59.577 37.037 0.00 0.00 37.01 2.78
761 1993 2.247637 TCTGACGTTCGATTTGTAGCG 58.752 47.619 0.00 0.00 33.70 4.26
787 2019 4.955925 AACGTTCGATTTGCCATGATAA 57.044 36.364 0.00 0.00 0.00 1.75
788 2020 4.955925 AAACGTTCGATTTGCCATGATA 57.044 36.364 0.00 0.00 0.00 2.15
789 2021 3.848272 AAACGTTCGATTTGCCATGAT 57.152 38.095 0.00 0.00 0.00 2.45
790 2022 3.634568 AAAACGTTCGATTTGCCATGA 57.365 38.095 0.00 0.00 0.00 3.07
839 2114 4.764823 ACAAAATACCTGAAGAATCGCCAA 59.235 37.500 0.00 0.00 0.00 4.52
842 2117 5.296813 ACACAAAATACCTGAAGAATCGC 57.703 39.130 0.00 0.00 0.00 4.58
843 2118 9.329913 CTTTAACACAAAATACCTGAAGAATCG 57.670 33.333 0.00 0.00 0.00 3.34
844 2119 9.129209 GCTTTAACACAAAATACCTGAAGAATC 57.871 33.333 0.00 0.00 0.00 2.52
851 2126 5.398122 CACACGCTTTAACACAAAATACCTG 59.602 40.000 0.00 0.00 0.00 4.00
863 2325 4.531659 ACAGAGAAACACACGCTTTAAC 57.468 40.909 0.00 0.00 0.00 2.01
892 2354 8.656849 CCTGAACATATCTACACAACTAACAAC 58.343 37.037 0.00 0.00 0.00 3.32
901 2363 7.817478 CACAACTAACCTGAACATATCTACACA 59.183 37.037 0.00 0.00 0.00 3.72
902 2364 7.817962 ACACAACTAACCTGAACATATCTACAC 59.182 37.037 0.00 0.00 0.00 2.90
905 2367 9.470399 TCTACACAACTAACCTGAACATATCTA 57.530 33.333 0.00 0.00 0.00 1.98
906 2368 8.362464 TCTACACAACTAACCTGAACATATCT 57.638 34.615 0.00 0.00 0.00 1.98
910 2372 8.540388 ACATATCTACACAACTAACCTGAACAT 58.460 33.333 0.00 0.00 0.00 2.71
912 2374 8.773404 AACATATCTACACAACTAACCTGAAC 57.227 34.615 0.00 0.00 0.00 3.18
973 2462 2.189784 GCGGCCTAGGGAGAAACC 59.810 66.667 11.72 0.37 38.08 3.27
986 2477 3.056313 GACATTGGAAGGCAGCGGC 62.056 63.158 0.00 0.00 40.13 6.53
990 2481 1.503542 GCACGACATTGGAAGGCAG 59.496 57.895 0.00 0.00 0.00 4.85
1025 2519 0.178533 AGAGATGAAGAGCCAGCAGC 59.821 55.000 0.00 0.00 44.25 5.25
1101 2595 4.752879 GAAGCGCGTGTGGCCCTA 62.753 66.667 8.43 0.00 38.94 3.53
1111 2605 4.856607 GGAGGAGGTCGAAGCGCG 62.857 72.222 0.00 0.00 42.69 6.86
1117 2611 4.816984 GAGGCGGGAGGAGGTCGA 62.817 72.222 0.00 0.00 0.00 4.20
1185 2679 1.511305 CGGAGGTATCGTGTGTGCT 59.489 57.895 0.00 0.00 0.00 4.40
1188 2682 2.890371 GGCGGAGGTATCGTGTGT 59.110 61.111 0.00 0.00 0.00 3.72
1304 2798 4.098914 TGCTAAGACACAAGGGACAAAT 57.901 40.909 0.00 0.00 0.00 2.32
1349 2843 6.449635 AGTGAAATGTTAAAGTGTGCTGAA 57.550 33.333 0.00 0.00 0.00 3.02
1353 2847 3.664025 GCGAGTGAAATGTTAAAGTGTGC 59.336 43.478 0.00 0.00 0.00 4.57
1361 2855 4.340894 GCTCAATGCGAGTGAAATGTTA 57.659 40.909 0.00 0.00 44.33 2.41
1410 2904 3.181507 CGTCAGGAATTAACCACTGCATG 60.182 47.826 0.00 0.00 0.00 4.06
1411 2905 3.009723 CGTCAGGAATTAACCACTGCAT 58.990 45.455 0.00 0.00 0.00 3.96
1412 2906 2.037902 TCGTCAGGAATTAACCACTGCA 59.962 45.455 0.00 0.00 0.00 4.41
1413 2907 2.695359 TCGTCAGGAATTAACCACTGC 58.305 47.619 0.00 0.00 0.00 4.40
1416 2910 3.374058 CACCATCGTCAGGAATTAACCAC 59.626 47.826 0.00 0.00 0.00 4.16
1424 2918 3.427573 TCTTCTACACCATCGTCAGGAA 58.572 45.455 0.00 0.00 0.00 3.36
1431 2925 4.745125 ACGCATTTATCTTCTACACCATCG 59.255 41.667 0.00 0.00 0.00 3.84
1432 2926 5.559035 GCACGCATTTATCTTCTACACCATC 60.559 44.000 0.00 0.00 0.00 3.51
1433 2927 4.273480 GCACGCATTTATCTTCTACACCAT 59.727 41.667 0.00 0.00 0.00 3.55
1434 2928 3.621268 GCACGCATTTATCTTCTACACCA 59.379 43.478 0.00 0.00 0.00 4.17
1435 2929 3.621268 TGCACGCATTTATCTTCTACACC 59.379 43.478 0.00 0.00 0.00 4.16
1436 2930 4.857871 TGCACGCATTTATCTTCTACAC 57.142 40.909 0.00 0.00 0.00 2.90
1437 2931 5.871465 TTTGCACGCATTTATCTTCTACA 57.129 34.783 0.00 0.00 0.00 2.74
1438 2932 7.164826 CAGAATTTGCACGCATTTATCTTCTAC 59.835 37.037 0.00 0.00 0.00 2.59
1439 2933 7.188834 CAGAATTTGCACGCATTTATCTTCTA 58.811 34.615 0.00 0.00 0.00 2.10
1440 2934 6.032094 CAGAATTTGCACGCATTTATCTTCT 58.968 36.000 0.00 0.00 0.00 2.85
1441 2935 6.252036 CAGAATTTGCACGCATTTATCTTC 57.748 37.500 0.00 0.00 0.00 2.87
1472 2966 2.556189 CCGAACAATCCAACCAATGTGA 59.444 45.455 0.00 0.00 0.00 3.58
1483 2977 2.500509 TTGTTGCAACCGAACAATCC 57.499 45.000 26.14 0.00 38.17 3.01
1484 2978 5.006165 TCAATTTTGTTGCAACCGAACAATC 59.994 36.000 26.14 0.00 41.66 2.67
1488 2982 4.260172 CCTTCAATTTTGTTGCAACCGAAC 60.260 41.667 26.14 2.46 0.00 3.95
1491 2985 2.543430 CCCTTCAATTTTGTTGCAACCG 59.457 45.455 26.14 8.25 0.00 4.44
1492 2986 2.877786 CCCCTTCAATTTTGTTGCAACC 59.122 45.455 26.14 9.39 0.00 3.77
1493 2987 3.802866 TCCCCTTCAATTTTGTTGCAAC 58.197 40.909 22.83 22.83 0.00 4.17
1494 2988 4.703379 ATCCCCTTCAATTTTGTTGCAA 57.297 36.364 0.00 0.00 0.00 4.08
1495 2989 4.102210 TCAATCCCCTTCAATTTTGTTGCA 59.898 37.500 0.00 0.00 0.00 4.08
1496 2990 4.640364 TCAATCCCCTTCAATTTTGTTGC 58.360 39.130 0.00 0.00 0.00 4.17
1497 2991 6.203338 CACTTCAATCCCCTTCAATTTTGTTG 59.797 38.462 0.00 0.00 0.00 3.33
1498 2992 6.290605 CACTTCAATCCCCTTCAATTTTGTT 58.709 36.000 0.00 0.00 0.00 2.83
1499 2993 5.221702 CCACTTCAATCCCCTTCAATTTTGT 60.222 40.000 0.00 0.00 0.00 2.83
1500 2994 5.011943 TCCACTTCAATCCCCTTCAATTTTG 59.988 40.000 0.00 0.00 0.00 2.44
1501 2995 5.154418 TCCACTTCAATCCCCTTCAATTTT 58.846 37.500 0.00 0.00 0.00 1.82
1502 2996 4.750941 TCCACTTCAATCCCCTTCAATTT 58.249 39.130 0.00 0.00 0.00 1.82
1503 2997 4.402616 TCCACTTCAATCCCCTTCAATT 57.597 40.909 0.00 0.00 0.00 2.32
1504 2998 4.614967 ATCCACTTCAATCCCCTTCAAT 57.385 40.909 0.00 0.00 0.00 2.57
1505 2999 4.088634 CAATCCACTTCAATCCCCTTCAA 58.911 43.478 0.00 0.00 0.00 2.69
1506 3000 3.564133 CCAATCCACTTCAATCCCCTTCA 60.564 47.826 0.00 0.00 0.00 3.02
1507 3001 3.026694 CCAATCCACTTCAATCCCCTTC 58.973 50.000 0.00 0.00 0.00 3.46
1508 3002 2.292455 CCCAATCCACTTCAATCCCCTT 60.292 50.000 0.00 0.00 0.00 3.95
1509 3003 1.288932 CCCAATCCACTTCAATCCCCT 59.711 52.381 0.00 0.00 0.00 4.79
1510 3004 1.689258 CCCCAATCCACTTCAATCCCC 60.689 57.143 0.00 0.00 0.00 4.81
1511 3005 1.007118 ACCCCAATCCACTTCAATCCC 59.993 52.381 0.00 0.00 0.00 3.85
1512 3006 2.102578 CACCCCAATCCACTTCAATCC 58.897 52.381 0.00 0.00 0.00 3.01
1513 3007 2.102578 CCACCCCAATCCACTTCAATC 58.897 52.381 0.00 0.00 0.00 2.67
1514 3008 1.715931 TCCACCCCAATCCACTTCAAT 59.284 47.619 0.00 0.00 0.00 2.57
1515 3009 1.153539 TCCACCCCAATCCACTTCAA 58.846 50.000 0.00 0.00 0.00 2.69
1516 3010 1.381867 ATCCACCCCAATCCACTTCA 58.618 50.000 0.00 0.00 0.00 3.02
1517 3011 2.532250 AATCCACCCCAATCCACTTC 57.468 50.000 0.00 0.00 0.00 3.01
1518 3012 4.412060 TTTAATCCACCCCAATCCACTT 57.588 40.909 0.00 0.00 0.00 3.16
1519 3013 4.546674 GATTTAATCCACCCCAATCCACT 58.453 43.478 0.00 0.00 0.00 4.00
1520 3014 4.937201 GATTTAATCCACCCCAATCCAC 57.063 45.455 0.00 0.00 0.00 4.02
1536 3030 9.753674 AGTGAGATTTGACTTTTATGGGATTTA 57.246 29.630 0.00 0.00 0.00 1.40
1537 3031 8.655935 AGTGAGATTTGACTTTTATGGGATTT 57.344 30.769 0.00 0.00 0.00 2.17
1538 3032 7.890127 TGAGTGAGATTTGACTTTTATGGGATT 59.110 33.333 0.00 0.00 0.00 3.01
1539 3033 7.337942 GTGAGTGAGATTTGACTTTTATGGGAT 59.662 37.037 0.00 0.00 0.00 3.85
1540 3034 6.655003 GTGAGTGAGATTTGACTTTTATGGGA 59.345 38.462 0.00 0.00 0.00 4.37
1541 3035 6.127897 GGTGAGTGAGATTTGACTTTTATGGG 60.128 42.308 0.00 0.00 0.00 4.00
1542 3036 6.127897 GGGTGAGTGAGATTTGACTTTTATGG 60.128 42.308 0.00 0.00 0.00 2.74
1543 3037 6.127897 GGGGTGAGTGAGATTTGACTTTTATG 60.128 42.308 0.00 0.00 0.00 1.90
1544 3038 5.946377 GGGGTGAGTGAGATTTGACTTTTAT 59.054 40.000 0.00 0.00 0.00 1.40
1545 3039 5.313712 GGGGTGAGTGAGATTTGACTTTTA 58.686 41.667 0.00 0.00 0.00 1.52
1546 3040 4.145052 GGGGTGAGTGAGATTTGACTTTT 58.855 43.478 0.00 0.00 0.00 2.27
1547 3041 3.498661 GGGGGTGAGTGAGATTTGACTTT 60.499 47.826 0.00 0.00 0.00 2.66
1548 3042 2.040412 GGGGGTGAGTGAGATTTGACTT 59.960 50.000 0.00 0.00 0.00 3.01
1549 3043 1.630878 GGGGGTGAGTGAGATTTGACT 59.369 52.381 0.00 0.00 0.00 3.41
1550 3044 1.351017 TGGGGGTGAGTGAGATTTGAC 59.649 52.381 0.00 0.00 0.00 3.18
1551 3045 1.351017 GTGGGGGTGAGTGAGATTTGA 59.649 52.381 0.00 0.00 0.00 2.69
1552 3046 1.614317 GGTGGGGGTGAGTGAGATTTG 60.614 57.143 0.00 0.00 0.00 2.32
1553 3047 0.698818 GGTGGGGGTGAGTGAGATTT 59.301 55.000 0.00 0.00 0.00 2.17
1554 3048 1.208165 GGGTGGGGGTGAGTGAGATT 61.208 60.000 0.00 0.00 0.00 2.40
1555 3049 1.616628 GGGTGGGGGTGAGTGAGAT 60.617 63.158 0.00 0.00 0.00 2.75
1556 3050 2.203938 GGGTGGGGGTGAGTGAGA 60.204 66.667 0.00 0.00 0.00 3.27
1557 3051 2.529136 TGGGTGGGGGTGAGTGAG 60.529 66.667 0.00 0.00 0.00 3.51
1558 3052 2.852075 GTGGGTGGGGGTGAGTGA 60.852 66.667 0.00 0.00 0.00 3.41
1559 3053 3.966543 GGTGGGTGGGGGTGAGTG 61.967 72.222 0.00 0.00 0.00 3.51
1568 3062 4.263572 TTCTGTGCGGGTGGGTGG 62.264 66.667 0.00 0.00 0.00 4.61
1569 3063 2.669569 CTTCTGTGCGGGTGGGTG 60.670 66.667 0.00 0.00 0.00 4.61
1570 3064 2.847234 TCTTCTGTGCGGGTGGGT 60.847 61.111 0.00 0.00 0.00 4.51
1571 3065 2.046892 CTCTTCTGTGCGGGTGGG 60.047 66.667 0.00 0.00 0.00 4.61
1572 3066 2.046892 CCTCTTCTGTGCGGGTGG 60.047 66.667 0.00 0.00 0.00 4.61
1573 3067 0.535102 AAACCTCTTCTGTGCGGGTG 60.535 55.000 0.00 0.00 0.00 4.61
1574 3068 1.053424 TAAACCTCTTCTGTGCGGGT 58.947 50.000 0.00 0.00 0.00 5.28
1575 3069 1.804748 GTTAAACCTCTTCTGTGCGGG 59.195 52.381 0.00 0.00 0.00 6.13
1576 3070 2.480419 CAGTTAAACCTCTTCTGTGCGG 59.520 50.000 0.00 0.00 0.00 5.69
1577 3071 3.390135 TCAGTTAAACCTCTTCTGTGCG 58.610 45.455 0.00 0.00 0.00 5.34
1578 3072 5.948992 ATTCAGTTAAACCTCTTCTGTGC 57.051 39.130 0.00 0.00 0.00 4.57
1579 3073 7.361286 GCCTTATTCAGTTAAACCTCTTCTGTG 60.361 40.741 0.00 0.00 0.00 3.66
1580 3074 6.655425 GCCTTATTCAGTTAAACCTCTTCTGT 59.345 38.462 0.00 0.00 0.00 3.41
1581 3075 6.094186 GGCCTTATTCAGTTAAACCTCTTCTG 59.906 42.308 0.00 0.00 0.00 3.02
1582 3076 6.012421 AGGCCTTATTCAGTTAAACCTCTTCT 60.012 38.462 0.00 0.00 0.00 2.85
1583 3077 6.181190 AGGCCTTATTCAGTTAAACCTCTTC 58.819 40.000 0.00 0.00 0.00 2.87
1584 3078 6.140968 AGGCCTTATTCAGTTAAACCTCTT 57.859 37.500 0.00 0.00 0.00 2.85
1585 3079 5.780958 AGGCCTTATTCAGTTAAACCTCT 57.219 39.130 0.00 0.00 0.00 3.69
1586 3080 7.065923 CAGTTAGGCCTTATTCAGTTAAACCTC 59.934 40.741 12.58 0.00 0.00 3.85
1587 3081 6.884836 CAGTTAGGCCTTATTCAGTTAAACCT 59.115 38.462 12.58 0.00 0.00 3.50
1588 3082 6.095021 CCAGTTAGGCCTTATTCAGTTAAACC 59.905 42.308 12.58 0.00 0.00 3.27
1589 3083 6.882678 TCCAGTTAGGCCTTATTCAGTTAAAC 59.117 38.462 12.58 4.91 37.29 2.01
1590 3084 7.023171 TCCAGTTAGGCCTTATTCAGTTAAA 57.977 36.000 12.58 0.00 37.29 1.52
1591 3085 6.630203 TCCAGTTAGGCCTTATTCAGTTAA 57.370 37.500 12.58 0.00 37.29 2.01
1592 3086 6.824958 ATCCAGTTAGGCCTTATTCAGTTA 57.175 37.500 12.58 0.00 37.29 2.24
1593 3087 5.717119 ATCCAGTTAGGCCTTATTCAGTT 57.283 39.130 12.58 0.00 37.29 3.16
1594 3088 5.191722 TCAATCCAGTTAGGCCTTATTCAGT 59.808 40.000 12.58 0.00 37.29 3.41
1595 3089 5.529060 GTCAATCCAGTTAGGCCTTATTCAG 59.471 44.000 12.58 0.00 37.29 3.02
1596 3090 5.437060 GTCAATCCAGTTAGGCCTTATTCA 58.563 41.667 12.58 0.00 37.29 2.57
1597 3091 4.822350 GGTCAATCCAGTTAGGCCTTATTC 59.178 45.833 12.58 0.00 37.29 1.75
1598 3092 4.478686 AGGTCAATCCAGTTAGGCCTTATT 59.521 41.667 12.58 0.00 39.02 1.40
1599 3093 4.047883 AGGTCAATCCAGTTAGGCCTTAT 58.952 43.478 12.58 0.00 39.02 1.73
1600 3094 3.454812 GAGGTCAATCCAGTTAGGCCTTA 59.545 47.826 12.58 0.00 39.02 2.69
1601 3095 2.239907 GAGGTCAATCCAGTTAGGCCTT 59.760 50.000 12.58 0.00 39.02 4.35
1602 3096 1.840635 GAGGTCAATCCAGTTAGGCCT 59.159 52.381 11.78 11.78 39.02 5.19
1603 3097 1.559682 TGAGGTCAATCCAGTTAGGCC 59.440 52.381 0.00 0.00 39.02 5.19
1604 3098 3.567478 ATGAGGTCAATCCAGTTAGGC 57.433 47.619 0.00 0.00 39.02 3.93
1605 3099 4.656112 AGGTATGAGGTCAATCCAGTTAGG 59.344 45.833 6.58 0.00 39.02 2.69
1606 3100 5.878406 AGGTATGAGGTCAATCCAGTTAG 57.122 43.478 6.58 0.00 39.02 2.34
1607 3101 6.441222 ACTAGGTATGAGGTCAATCCAGTTA 58.559 40.000 0.00 0.00 39.02 2.24
1608 3102 5.281314 ACTAGGTATGAGGTCAATCCAGTT 58.719 41.667 0.00 0.00 39.02 3.16
1609 3103 4.884961 ACTAGGTATGAGGTCAATCCAGT 58.115 43.478 0.00 5.49 39.02 4.00
1610 3104 5.363868 TCAACTAGGTATGAGGTCAATCCAG 59.636 44.000 0.00 5.06 39.02 3.86
1611 3105 5.277250 TCAACTAGGTATGAGGTCAATCCA 58.723 41.667 0.00 0.00 39.02 3.41
1612 3106 5.740513 GCTCAACTAGGTATGAGGTCAATCC 60.741 48.000 18.39 3.08 42.62 3.01
1613 3107 5.163405 TGCTCAACTAGGTATGAGGTCAATC 60.163 44.000 18.39 6.58 42.62 2.67
1614 3108 4.716784 TGCTCAACTAGGTATGAGGTCAAT 59.283 41.667 18.39 0.00 42.62 2.57
1615 3109 4.081642 GTGCTCAACTAGGTATGAGGTCAA 60.082 45.833 18.39 0.14 42.62 3.18
1616 3110 3.447586 GTGCTCAACTAGGTATGAGGTCA 59.552 47.826 18.39 9.89 42.62 4.02
1617 3111 3.447586 TGTGCTCAACTAGGTATGAGGTC 59.552 47.826 18.39 8.09 42.62 3.85
1618 3112 3.441101 TGTGCTCAACTAGGTATGAGGT 58.559 45.455 18.39 0.00 42.62 3.85
1619 3113 4.081420 ACTTGTGCTCAACTAGGTATGAGG 60.081 45.833 18.39 8.39 42.62 3.86
1628 3122 4.460263 ACATGGAAACTTGTGCTCAACTA 58.540 39.130 0.00 0.00 45.94 2.24
1643 3137 0.178967 TGGCTCCTTGCAACATGGAA 60.179 50.000 7.28 0.00 45.15 3.53
1659 3153 5.393461 CCAGGAAGTTGATACATTCTTTGGC 60.393 44.000 0.00 0.00 0.00 4.52
1661 3155 6.402550 CGTCCAGGAAGTTGATACATTCTTTG 60.403 42.308 0.00 0.00 0.00 2.77
1662 3156 5.643777 CGTCCAGGAAGTTGATACATTCTTT 59.356 40.000 0.00 0.00 0.00 2.52
1663 3157 5.046591 TCGTCCAGGAAGTTGATACATTCTT 60.047 40.000 1.93 0.00 0.00 2.52
1664 3158 4.466370 TCGTCCAGGAAGTTGATACATTCT 59.534 41.667 1.93 0.00 0.00 2.40
1665 3159 4.755411 TCGTCCAGGAAGTTGATACATTC 58.245 43.478 1.93 0.00 0.00 2.67
1666 3160 4.819105 TCGTCCAGGAAGTTGATACATT 57.181 40.909 1.93 0.00 0.00 2.71
1667 3161 4.819105 TTCGTCCAGGAAGTTGATACAT 57.181 40.909 1.93 0.00 0.00 2.29
1668 3162 4.503910 CATTCGTCCAGGAAGTTGATACA 58.496 43.478 1.93 0.00 0.00 2.29
1669 3163 3.871594 CCATTCGTCCAGGAAGTTGATAC 59.128 47.826 1.93 0.00 0.00 2.24
1670 3164 3.772572 TCCATTCGTCCAGGAAGTTGATA 59.227 43.478 1.93 0.00 0.00 2.15
1676 3170 2.744202 CAAAGTCCATTCGTCCAGGAAG 59.256 50.000 0.00 0.00 32.30 3.46
1687 3181 8.971073 CCCTTAATATTTCAGACAAAGTCCATT 58.029 33.333 0.00 0.00 32.18 3.16
1697 3216 5.201243 ACCAAGCCCCTTAATATTTCAGAC 58.799 41.667 0.00 0.00 0.00 3.51
1706 3225 3.565670 CCCAAAGTACCAAGCCCCTTAAT 60.566 47.826 0.00 0.00 0.00 1.40
1718 3237 4.503714 TCCATCAAGATCCCAAAGTACC 57.496 45.455 0.00 0.00 0.00 3.34
1722 3241 7.282675 GCTATCATATCCATCAAGATCCCAAAG 59.717 40.741 0.00 0.00 0.00 2.77
1742 3263 4.515191 GTGACTTCAAACCTTGTGCTATCA 59.485 41.667 0.00 0.00 0.00 2.15
1765 3286 0.749649 ACAGGCTCTCGGCTAATCTG 59.250 55.000 0.00 0.00 45.39 2.90
1774 3295 4.453136 GGAGTACTATCTAACAGGCTCTCG 59.547 50.000 0.00 0.00 0.00 4.04
1794 3360 3.800604 GCTTAAGCATCGTAGGGAAGGAG 60.801 52.174 22.59 0.00 41.59 3.69
1796 3362 2.484889 GCTTAAGCATCGTAGGGAAGG 58.515 52.381 22.59 0.00 41.59 3.46
1833 3399 8.906867 AAGTTCTACACTTGTACAGTTGTACTA 58.093 33.333 19.75 13.20 44.70 1.82
1834 3400 7.779073 AAGTTCTACACTTGTACAGTTGTACT 58.221 34.615 19.75 9.47 44.70 2.73
1835 3401 7.998753 AAGTTCTACACTTGTACAGTTGTAC 57.001 36.000 14.03 14.03 44.70 2.90
1850 3523 2.229792 CAAAGGGCTGCAAGTTCTACA 58.770 47.619 0.50 0.00 35.30 2.74
1863 3536 1.268539 CGTCAACAACTCACAAAGGGC 60.269 52.381 0.00 0.00 0.00 5.19
1878 3551 5.970317 TGATACCAGTTTAGAGTCGTCAA 57.030 39.130 0.00 0.00 0.00 3.18
1882 3555 9.751542 ATCTATTTTGATACCAGTTTAGAGTCG 57.248 33.333 0.00 0.00 0.00 4.18
1898 3571 9.942850 TCTATTGTGTTGAGTCATCTATTTTGA 57.057 29.630 0.00 0.00 0.00 2.69
1902 3575 9.539825 GTCATCTATTGTGTTGAGTCATCTATT 57.460 33.333 0.00 0.00 0.00 1.73
1903 3576 8.922237 AGTCATCTATTGTGTTGAGTCATCTAT 58.078 33.333 0.00 0.00 0.00 1.98
1904 3577 8.298729 AGTCATCTATTGTGTTGAGTCATCTA 57.701 34.615 0.00 0.00 0.00 1.98
1905 3578 7.093596 TGAGTCATCTATTGTGTTGAGTCATCT 60.094 37.037 0.00 0.00 41.33 2.90
1906 3579 7.038048 TGAGTCATCTATTGTGTTGAGTCATC 58.962 38.462 0.00 0.00 41.33 2.92
1907 3580 6.939622 TGAGTCATCTATTGTGTTGAGTCAT 58.060 36.000 0.00 0.00 41.33 3.06
1908 3581 6.345096 TGAGTCATCTATTGTGTTGAGTCA 57.655 37.500 5.44 5.44 42.99 3.41
1909 3582 6.870965 AGTTGAGTCATCTATTGTGTTGAGTC 59.129 38.462 1.70 0.00 38.47 3.36
1910 3583 6.763355 AGTTGAGTCATCTATTGTGTTGAGT 58.237 36.000 1.70 0.00 0.00 3.41
1911 3584 7.664082 AAGTTGAGTCATCTATTGTGTTGAG 57.336 36.000 4.14 0.00 0.00 3.02
1912 3585 7.498900 ACAAAGTTGAGTCATCTATTGTGTTGA 59.501 33.333 19.66 0.00 0.00 3.18
1913 3586 7.642669 ACAAAGTTGAGTCATCTATTGTGTTG 58.357 34.615 19.66 14.65 0.00 3.33
1914 3587 7.807977 ACAAAGTTGAGTCATCTATTGTGTT 57.192 32.000 19.66 5.10 0.00 3.32
1915 3588 8.150945 AGTACAAAGTTGAGTCATCTATTGTGT 58.849 33.333 24.00 18.21 0.00 3.72
1916 3589 8.539770 AGTACAAAGTTGAGTCATCTATTGTG 57.460 34.615 24.00 15.29 0.00 3.33
1951 3624 9.696917 GTTCCAAAATAGATGACTCAATTTTGT 57.303 29.630 18.01 0.00 43.14 2.83
1952 3625 8.853345 CGTTCCAAAATAGATGACTCAATTTTG 58.147 33.333 15.00 15.00 43.77 2.44
1953 3626 8.028938 CCGTTCCAAAATAGATGACTCAATTTT 58.971 33.333 0.00 0.00 33.07 1.82
1954 3627 7.393234 TCCGTTCCAAAATAGATGACTCAATTT 59.607 33.333 0.00 0.00 0.00 1.82
1955 3628 6.884295 TCCGTTCCAAAATAGATGACTCAATT 59.116 34.615 0.00 0.00 0.00 2.32
1956 3629 6.414732 TCCGTTCCAAAATAGATGACTCAAT 58.585 36.000 0.00 0.00 0.00 2.57
1957 3630 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1958 3631 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1959 3632 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1960 3633 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1961 3634 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1962 3635 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1963 3636 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1964 3637 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1965 3638 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1966 3639 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1967 3640 4.966805 AGATACTCCCTCCGTTCCAAAATA 59.033 41.667 0.00 0.00 0.00 1.40
1968 3641 3.780850 AGATACTCCCTCCGTTCCAAAAT 59.219 43.478 0.00 0.00 0.00 1.82
1969 3642 3.178865 AGATACTCCCTCCGTTCCAAAA 58.821 45.455 0.00 0.00 0.00 2.44
1970 3643 2.829023 AGATACTCCCTCCGTTCCAAA 58.171 47.619 0.00 0.00 0.00 3.28
1971 3644 2.544844 AGATACTCCCTCCGTTCCAA 57.455 50.000 0.00 0.00 0.00 3.53
1972 3645 2.544844 AAGATACTCCCTCCGTTCCA 57.455 50.000 0.00 0.00 0.00 3.53
1973 3646 3.294214 TGTAAGATACTCCCTCCGTTCC 58.706 50.000 0.00 0.00 0.00 3.62
1974 3647 4.996788 TTGTAAGATACTCCCTCCGTTC 57.003 45.455 0.00 0.00 0.00 3.95
1975 3648 6.462628 GCTTATTGTAAGATACTCCCTCCGTT 60.463 42.308 1.10 0.00 0.00 4.44
1976 3649 5.010820 GCTTATTGTAAGATACTCCCTCCGT 59.989 44.000 1.10 0.00 0.00 4.69
1977 3650 5.244178 AGCTTATTGTAAGATACTCCCTCCG 59.756 44.000 1.10 0.00 0.00 4.63
1978 3651 6.673839 AGCTTATTGTAAGATACTCCCTCC 57.326 41.667 1.10 0.00 0.00 4.30
1979 3652 6.425417 GCAAGCTTATTGTAAGATACTCCCTC 59.575 42.308 0.00 0.00 0.00 4.30
1980 3653 6.126768 TGCAAGCTTATTGTAAGATACTCCCT 60.127 38.462 0.00 0.00 0.00 4.20
1981 3654 6.055588 TGCAAGCTTATTGTAAGATACTCCC 58.944 40.000 0.00 0.00 0.00 4.30
1982 3655 7.553881 TTGCAAGCTTATTGTAAGATACTCC 57.446 36.000 0.00 0.00 0.00 3.85
1983 3656 9.495754 CTTTTGCAAGCTTATTGTAAGATACTC 57.504 33.333 0.00 0.00 0.00 2.59
1984 3657 9.014297 ACTTTTGCAAGCTTATTGTAAGATACT 57.986 29.630 0.00 0.00 32.57 2.12
1999 3672 6.662414 AGGAACTTTTAAACTTTTGCAAGC 57.338 33.333 0.00 0.00 27.25 4.01
2031 3704 2.107950 TTCCAGTTCCAACATAGCCG 57.892 50.000 0.00 0.00 0.00 5.52
2040 3713 1.133513 ACCATGCAGTTTCCAGTTCCA 60.134 47.619 0.00 0.00 0.00 3.53
2041 3714 1.620822 ACCATGCAGTTTCCAGTTCC 58.379 50.000 0.00 0.00 0.00 3.62
2042 3715 4.265073 AGATACCATGCAGTTTCCAGTTC 58.735 43.478 0.00 0.00 0.00 3.01
2043 3716 4.307032 AGATACCATGCAGTTTCCAGTT 57.693 40.909 0.00 0.00 0.00 3.16
2044 3717 5.636903 ATAGATACCATGCAGTTTCCAGT 57.363 39.130 0.00 0.00 0.00 4.00
2045 3718 5.240183 CCAATAGATACCATGCAGTTTCCAG 59.760 44.000 0.00 0.00 0.00 3.86
2046 3719 5.132502 CCAATAGATACCATGCAGTTTCCA 58.867 41.667 0.00 0.00 0.00 3.53
2119 3799 1.005294 CGAAATGCACAGCAACCTGC 61.005 55.000 0.00 0.00 43.62 4.85
2153 3833 7.233348 ACAATAAATGACAGAGTGGAACCAAAT 59.767 33.333 0.00 0.00 37.80 2.32
2218 3898 3.115390 CCTTATGGAGTGAGGGAAAGGA 58.885 50.000 0.00 0.00 35.14 3.36
2261 3941 9.663904 TTTTCTTTCAACGATTATCTTTGAGTG 57.336 29.630 12.65 10.23 36.28 3.51
2271 3951 7.694784 GGCGACATTATTTTCTTTCAACGATTA 59.305 33.333 0.00 0.00 0.00 1.75
2278 3964 4.082463 GGGTGGCGACATTATTTTCTTTCA 60.082 41.667 0.00 0.00 46.14 2.69
2311 3997 2.032550 CGAGCCATTTCAGCACATAAGG 59.967 50.000 0.00 0.00 0.00 2.69
2403 4089 8.721019 ATGACCAAATATTTAGCAACCATTTG 57.279 30.769 0.00 0.00 36.70 2.32
2461 4147 1.078759 ACAGCATACAAGCGAGCGAC 61.079 55.000 0.00 0.00 40.15 5.19
2469 4155 5.039984 CAGCACTCTACTACAGCATACAAG 58.960 45.833 0.00 0.00 0.00 3.16
2490 4176 3.181451 TGCAGAATGGCCTAGGATTACAG 60.181 47.826 14.75 0.00 35.86 2.74
2592 4278 0.536260 AGCTGAGCTGATCACCTGAC 59.464 55.000 5.97 0.00 37.57 3.51
2707 4393 7.765695 ATGAACAAGAACAAGATGTATTGGT 57.234 32.000 10.97 6.15 33.82 3.67
2779 4465 4.459337 GGTACCTCTTGTGCTGCTAATTTT 59.541 41.667 4.06 0.00 0.00 1.82
2936 4623 6.025707 CTTTAGTACATAAAGCAGCGACAG 57.974 41.667 0.00 0.00 42.88 3.51
2963 4650 9.116080 ACTCCCTCATATCCATATTAATTGTCA 57.884 33.333 0.00 0.00 0.00 3.58
3001 5490 6.183360 TGCCTGCATGTATCAAAAGGAAATAG 60.183 38.462 0.00 0.00 0.00 1.73
3017 5506 2.442212 TGTGAAAATGTGCCTGCATG 57.558 45.000 0.00 0.00 0.00 4.06
3151 5640 2.676121 CTTGCCGGGCATGGTGAA 60.676 61.111 24.49 5.50 38.76 3.18
3347 5852 4.202357 CCCTTGACCGATCCTTTGATATCA 60.202 45.833 0.00 0.00 0.00 2.15
3412 5917 4.578928 GGGCAACATAATCGTCCATTAACT 59.421 41.667 0.00 0.00 39.74 2.24
3429 5934 3.133365 ATAGGGCATCCGGGGCAAC 62.133 63.158 18.58 11.61 38.33 4.17
3488 5994 8.087750 CCATGGTAGAGACTATCAAAGAGATTC 58.912 40.741 2.57 0.00 38.19 2.52
3489 5995 7.472663 GCCATGGTAGAGACTATCAAAGAGATT 60.473 40.741 14.67 0.00 38.19 2.40
3490 5996 6.014669 GCCATGGTAGAGACTATCAAAGAGAT 60.015 42.308 14.67 0.00 40.86 2.75
3492 5998 5.537188 GCCATGGTAGAGACTATCAAAGAG 58.463 45.833 14.67 0.00 0.00 2.85
3739 6251 2.802816 CTCAGTGTCTACAACAGTTGGC 59.197 50.000 17.76 5.54 39.62 4.52
3827 6339 1.338105 TGTGCAGTTCTTCCATCTCCG 60.338 52.381 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.