Multiple sequence alignment - TraesCS1B01G094600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G094600 chr1B 100.000 4977 0 0 1 4977 96519619 96514643 0.000000e+00 9191.0
1 TraesCS1B01G094600 chr1B 98.374 246 4 0 3366 3611 57105792 57105547 2.750000e-117 433.0
2 TraesCS1B01G094600 chr1B 96.947 131 4 0 3668 3798 623731982 623732112 2.330000e-53 220.0
3 TraesCS1B01G094600 chr1B 86.667 90 11 1 536 625 485607713 485607625 1.140000e-16 99.0
4 TraesCS1B01G094600 chr1D 92.144 1553 80 22 811 2353 60284716 60286236 0.000000e+00 2154.0
5 TraesCS1B01G094600 chr1D 92.146 904 54 10 2463 3360 60286465 60287357 0.000000e+00 1260.0
6 TraesCS1B01G094600 chr1D 87.091 550 42 15 3798 4338 60287584 60288113 3.320000e-166 595.0
7 TraesCS1B01G094600 chr1D 90.506 158 9 1 4820 4977 60291629 60291780 2.350000e-48 204.0
8 TraesCS1B01G094600 chr1D 91.057 123 7 3 4646 4766 60291512 60291632 3.990000e-36 163.0
9 TraesCS1B01G094600 chr1A 90.687 1353 82 17 831 2172 58931243 58932562 0.000000e+00 1760.0
10 TraesCS1B01G094600 chr1A 86.278 634 59 16 3798 4419 58934502 58935119 0.000000e+00 664.0
11 TraesCS1B01G094600 chr1A 94.277 332 16 1 2650 2978 58933570 58933901 5.750000e-139 505.0
12 TraesCS1B01G094600 chr1A 92.500 320 22 1 2976 3295 58933982 58934299 1.630000e-124 457.0
13 TraesCS1B01G094600 chr1A 93.080 289 18 2 2364 2650 58932855 58933143 5.960000e-114 422.0
14 TraesCS1B01G094600 chr1A 86.992 369 17 14 4621 4977 58936588 58936937 2.170000e-103 387.0
15 TraesCS1B01G094600 chr2B 95.574 610 25 2 1 610 707497152 707497759 0.000000e+00 976.0
16 TraesCS1B01G094600 chr2B 94.137 614 34 2 1 613 708998734 708998122 0.000000e+00 933.0
17 TraesCS1B01G094600 chr2B 93.954 612 34 3 1 611 523397135 523397744 0.000000e+00 922.0
18 TraesCS1B01G094600 chr2B 95.556 135 6 0 3668 3802 77863135 77863001 3.020000e-52 217.0
19 TraesCS1B01G094600 chr2B 95.556 135 5 1 3668 3802 536806165 536806032 1.090000e-51 215.0
20 TraesCS1B01G094600 chr2B 87.778 90 10 1 536 625 230292293 230292205 2.450000e-18 104.0
21 TraesCS1B01G094600 chr2B 84.848 99 14 1 521 619 401349060 401349157 1.140000e-16 99.0
22 TraesCS1B01G094600 chr3B 94.426 610 33 1 1 609 637875579 637876188 0.000000e+00 937.0
23 TraesCS1B01G094600 chr3B 94.137 614 33 3 1 613 50807238 50806627 0.000000e+00 931.0
24 TraesCS1B01G094600 chr3B 86.783 628 74 8 2 623 242088640 242088016 0.000000e+00 691.0
25 TraesCS1B01G094600 chr5B 94.098 610 35 1 1 610 43679127 43679735 0.000000e+00 926.0
26 TraesCS1B01G094600 chr5B 93.770 610 36 2 1 609 529269182 529269790 0.000000e+00 915.0
27 TraesCS1B01G094600 chr5B 98.381 247 4 0 3365 3611 291075369 291075615 7.650000e-118 435.0
28 TraesCS1B01G094600 chr7B 93.770 610 36 2 1 609 176850412 176851020 0.000000e+00 915.0
29 TraesCS1B01G094600 chr7B 93.638 613 37 2 1 612 571542706 571542095 0.000000e+00 915.0
30 TraesCS1B01G094600 chr3A 98.780 246 3 0 3366 3611 724741077 724741322 5.920000e-119 438.0
31 TraesCS1B01G094600 chr4B 98.000 250 5 0 3366 3615 73279727 73279976 7.650000e-118 435.0
32 TraesCS1B01G094600 chr4B 96.850 254 7 1 3358 3611 73278013 73278265 1.660000e-114 424.0
33 TraesCS1B01G094600 chr4B 97.656 128 3 0 3670 3797 180671162 180671289 2.330000e-53 220.0
34 TraesCS1B01G094600 chr6B 97.628 253 5 1 3366 3617 502312962 502312710 2.750000e-117 433.0
35 TraesCS1B01G094600 chr3D 98.374 246 4 0 3366 3611 268942933 268942688 2.750000e-117 433.0
36 TraesCS1B01G094600 chr3D 77.125 647 104 35 4 625 307574179 307573552 7.980000e-88 335.0
37 TraesCS1B01G094600 chr3D 96.269 134 5 0 3668 3801 496172753 496172886 2.330000e-53 220.0
38 TraesCS1B01G094600 chr2A 97.984 248 5 0 3366 3613 79316663 79316416 9.900000e-117 431.0
39 TraesCS1B01G094600 chr2A 97.610 251 5 1 3362 3611 79318366 79318116 3.560000e-116 429.0
40 TraesCS1B01G094600 chr4D 84.890 364 43 10 1 360 303214660 303215015 1.700000e-94 357.0
41 TraesCS1B01G094600 chr5D 96.241 133 5 0 3663 3795 211375615 211375747 8.390000e-53 219.0
42 TraesCS1B01G094600 chrUn 95.556 135 6 0 3668 3802 468101920 468101786 3.020000e-52 217.0
43 TraesCS1B01G094600 chr2D 94.928 138 5 2 3671 3808 536091153 536091018 1.090000e-51 215.0
44 TraesCS1B01G094600 chr2D 92.617 149 10 1 3670 3817 257443133 257442985 3.900000e-51 213.0
45 TraesCS1B01G094600 chr6D 81.395 86 13 3 552 636 453991692 453991775 3.220000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G094600 chr1B 96514643 96519619 4976 True 9191.000000 9191 100.000000 1 4977 1 chr1B.!!$R2 4976
1 TraesCS1B01G094600 chr1D 60284716 60291780 7064 False 875.200000 2154 90.588800 811 4977 5 chr1D.!!$F1 4166
2 TraesCS1B01G094600 chr1A 58931243 58936937 5694 False 699.166667 1760 90.635667 831 4977 6 chr1A.!!$F1 4146
3 TraesCS1B01G094600 chr2B 707497152 707497759 607 False 976.000000 976 95.574000 1 610 1 chr2B.!!$F3 609
4 TraesCS1B01G094600 chr2B 708998122 708998734 612 True 933.000000 933 94.137000 1 613 1 chr2B.!!$R4 612
5 TraesCS1B01G094600 chr2B 523397135 523397744 609 False 922.000000 922 93.954000 1 611 1 chr2B.!!$F2 610
6 TraesCS1B01G094600 chr3B 637875579 637876188 609 False 937.000000 937 94.426000 1 609 1 chr3B.!!$F1 608
7 TraesCS1B01G094600 chr3B 50806627 50807238 611 True 931.000000 931 94.137000 1 613 1 chr3B.!!$R1 612
8 TraesCS1B01G094600 chr3B 242088016 242088640 624 True 691.000000 691 86.783000 2 623 1 chr3B.!!$R2 621
9 TraesCS1B01G094600 chr5B 43679127 43679735 608 False 926.000000 926 94.098000 1 610 1 chr5B.!!$F1 609
10 TraesCS1B01G094600 chr5B 529269182 529269790 608 False 915.000000 915 93.770000 1 609 1 chr5B.!!$F3 608
11 TraesCS1B01G094600 chr7B 176850412 176851020 608 False 915.000000 915 93.770000 1 609 1 chr7B.!!$F1 608
12 TraesCS1B01G094600 chr7B 571542095 571542706 611 True 915.000000 915 93.638000 1 612 1 chr7B.!!$R1 611
13 TraesCS1B01G094600 chr4B 73278013 73279976 1963 False 429.500000 435 97.425000 3358 3615 2 chr4B.!!$F2 257
14 TraesCS1B01G094600 chr3D 307573552 307574179 627 True 335.000000 335 77.125000 4 625 1 chr3D.!!$R2 621
15 TraesCS1B01G094600 chr2A 79316416 79318366 1950 True 430.000000 431 97.797000 3362 3613 2 chr2A.!!$R1 251

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
619 662 0.035725 TCCTCATCAGGCAGTTGCAG 60.036 55.000 6.43 0.00 44.36 4.41 F
663 706 0.037232 GCAACGGTAGAAGGCTGTCT 60.037 55.000 0.00 0.00 0.00 3.41 F
784 827 0.037326 TGTCATTCCTCACCGACAGC 60.037 55.000 0.00 0.00 33.61 4.40 F
790 833 0.037734 TCCTCACCGACAGCTGACTA 59.962 55.000 23.35 0.00 0.00 2.59 F
798 841 0.523966 GACAGCTGACTAGACACGCT 59.476 55.000 23.35 11.24 0.00 5.07 F
937 988 0.667792 GTCTGACCTTGTGACCGAGC 60.668 60.000 0.00 0.00 0.00 5.03 F
1258 1310 0.755686 GGGTCCTTGATCGAGCTCAT 59.244 55.000 15.40 6.45 0.00 2.90 F
2010 2066 1.464198 AGGGACTGGAAGCAACCCT 60.464 57.895 0.00 0.00 45.85 4.34 F
3600 4600 0.963856 TCGCGTCCTCCTTCTAGCAA 60.964 55.000 5.77 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1464 1519 1.153168 ACAGACGGCTTGCAACAGT 60.153 52.632 0.00 0.00 0.00 3.55 R
1578 1633 1.225983 CCCATAACCCCGCACATCA 59.774 57.895 0.00 0.00 0.00 3.07 R
1867 1922 1.761711 TTACCAAATGGGGGACTGGA 58.238 50.000 4.17 0.00 42.91 3.86 R
2222 2442 1.807142 GCTTCACCTGGTTTCTACTGC 59.193 52.381 0.00 0.00 0.00 4.40 R
2231 2451 2.173569 ACTTCTCAAAGCTTCACCTGGT 59.826 45.455 0.00 0.00 35.81 4.00 R
2232 2452 2.856222 ACTTCTCAAAGCTTCACCTGG 58.144 47.619 0.00 0.00 35.81 4.45 R
2600 2971 3.561725 CCGATGTTTCTCTAATTCCCAGC 59.438 47.826 0.00 0.00 0.00 4.85 R
3780 4780 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53 R
4572 8861 0.241213 CGACTCATGTCCGACACAGT 59.759 55.000 12.78 12.78 38.85 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 31 3.616821 GGAAAAACTTGCAACTTCACCAC 59.383 43.478 0.00 0.00 0.00 4.16
267 273 1.071471 CGAACCCTTGTGCCAGAGT 59.929 57.895 0.00 0.00 0.00 3.24
356 365 6.691255 ACATAAAGTAAGGGGTGTTACTGA 57.309 37.500 0.00 0.00 41.47 3.41
399 409 6.156949 ACTCTTAATGCCCATGAAGACTAAGA 59.843 38.462 4.30 0.81 34.21 2.10
550 593 5.907662 TCTTCTCATCTTCTGGGGTATTGAT 59.092 40.000 0.00 0.00 0.00 2.57
615 658 3.133721 GTCTGTATCCTCATCAGGCAGTT 59.866 47.826 0.00 0.00 40.12 3.16
619 662 0.035725 TCCTCATCAGGCAGTTGCAG 60.036 55.000 6.43 0.00 44.36 4.41
621 664 1.654954 CTCATCAGGCAGTTGCAGGC 61.655 60.000 6.43 0.00 44.36 4.85
622 665 1.974875 CATCAGGCAGTTGCAGGCA 60.975 57.895 6.43 0.00 44.36 4.75
623 666 1.677966 ATCAGGCAGTTGCAGGCAG 60.678 57.895 6.43 0.00 44.36 4.85
624 667 4.052229 CAGGCAGTTGCAGGCAGC 62.052 66.667 6.43 0.00 44.36 5.25
625 668 4.281527 AGGCAGTTGCAGGCAGCT 62.282 61.111 4.71 4.71 45.94 4.24
627 670 2.732658 GCAGTTGCAGGCAGCTTT 59.267 55.556 7.95 0.00 45.94 3.51
628 671 1.663702 GCAGTTGCAGGCAGCTTTG 60.664 57.895 7.95 0.81 45.94 2.77
629 672 1.663702 CAGTTGCAGGCAGCTTTGC 60.664 57.895 7.95 13.50 45.94 3.68
632 675 2.203379 TGCAGGCAGCTTTGCAGA 60.203 55.556 17.61 0.97 44.72 4.26
635 678 2.035312 AGGCAGCTTTGCAGAGGG 59.965 61.111 6.36 0.00 36.33 4.30
659 702 4.695560 GTGCAACGGTAGAAGGCT 57.304 55.556 0.00 0.00 0.00 4.58
662 705 0.320421 TGCAACGGTAGAAGGCTGTC 60.320 55.000 0.00 0.00 0.00 3.51
663 706 0.037232 GCAACGGTAGAAGGCTGTCT 60.037 55.000 0.00 0.00 0.00 3.41
664 707 1.714794 CAACGGTAGAAGGCTGTCTG 58.285 55.000 8.77 0.00 0.00 3.51
666 709 2.211250 ACGGTAGAAGGCTGTCTGTA 57.789 50.000 8.77 0.00 0.00 2.74
667 710 2.093106 ACGGTAGAAGGCTGTCTGTAG 58.907 52.381 8.77 3.87 0.00 2.74
670 713 1.743958 GTAGAAGGCTGTCTGTAGCGA 59.256 52.381 8.77 0.00 44.60 4.93
671 714 0.528470 AGAAGGCTGTCTGTAGCGAC 59.472 55.000 0.00 0.00 44.60 5.19
673 716 2.202623 GGCTGTCTGTAGCGACCG 60.203 66.667 0.00 0.00 44.60 4.79
674 717 2.202623 GCTGTCTGTAGCGACCGG 60.203 66.667 0.00 0.00 33.46 5.28
675 718 2.697761 GCTGTCTGTAGCGACCGGA 61.698 63.158 9.46 0.00 33.46 5.14
676 719 2.005960 GCTGTCTGTAGCGACCGGAT 62.006 60.000 9.46 0.00 33.46 4.18
677 720 0.456221 CTGTCTGTAGCGACCGGATT 59.544 55.000 9.46 0.00 32.97 3.01
678 721 0.892755 TGTCTGTAGCGACCGGATTT 59.107 50.000 9.46 0.00 32.97 2.17
679 722 1.274167 TGTCTGTAGCGACCGGATTTT 59.726 47.619 9.46 0.00 32.97 1.82
680 723 2.289195 TGTCTGTAGCGACCGGATTTTT 60.289 45.455 9.46 0.00 32.97 1.94
681 724 3.056678 TGTCTGTAGCGACCGGATTTTTA 60.057 43.478 9.46 0.00 32.97 1.52
682 725 3.550678 GTCTGTAGCGACCGGATTTTTAG 59.449 47.826 9.46 0.00 0.00 1.85
683 726 2.273557 TGTAGCGACCGGATTTTTAGC 58.726 47.619 9.46 0.00 0.00 3.09
684 727 1.257155 GTAGCGACCGGATTTTTAGCG 59.743 52.381 9.46 0.00 0.00 4.26
686 729 1.702491 GCGACCGGATTTTTAGCGCT 61.702 55.000 17.26 17.26 39.84 5.92
687 730 1.563111 CGACCGGATTTTTAGCGCTA 58.437 50.000 14.45 14.45 0.00 4.26
688 731 1.257155 CGACCGGATTTTTAGCGCTAC 59.743 52.381 18.63 4.90 0.00 3.58
689 732 2.273557 GACCGGATTTTTAGCGCTACA 58.726 47.619 18.63 8.18 0.00 2.74
691 734 2.093869 ACCGGATTTTTAGCGCTACAGA 60.094 45.455 18.63 6.43 0.00 3.41
694 737 3.802139 CGGATTTTTAGCGCTACAGATCA 59.198 43.478 26.20 8.06 0.00 2.92
695 738 4.449068 CGGATTTTTAGCGCTACAGATCAT 59.551 41.667 26.20 11.62 0.00 2.45
696 739 5.050091 CGGATTTTTAGCGCTACAGATCATT 60.050 40.000 26.20 6.54 0.00 2.57
699 742 3.819564 TTAGCGCTACAGATCATTGGT 57.180 42.857 18.63 0.00 0.00 3.67
700 743 4.929819 TTAGCGCTACAGATCATTGGTA 57.070 40.909 18.63 0.00 0.00 3.25
701 744 3.819564 AGCGCTACAGATCATTGGTAA 57.180 42.857 8.99 0.00 0.00 2.85
702 745 4.342862 AGCGCTACAGATCATTGGTAAT 57.657 40.909 8.99 0.00 0.00 1.89
703 746 4.708177 AGCGCTACAGATCATTGGTAATT 58.292 39.130 8.99 0.00 0.00 1.40
704 747 4.752101 AGCGCTACAGATCATTGGTAATTC 59.248 41.667 8.99 0.00 0.00 2.17
705 748 4.752101 GCGCTACAGATCATTGGTAATTCT 59.248 41.667 0.00 0.00 0.00 2.40
707 750 6.128795 GCGCTACAGATCATTGGTAATTCTAC 60.129 42.308 0.00 0.00 0.00 2.59
716 759 2.111041 GGTAATTCTACCGACGGACG 57.889 55.000 23.38 10.86 38.43 4.79
717 760 1.401905 GGTAATTCTACCGACGGACGT 59.598 52.381 23.38 0.00 38.43 4.34
718 761 2.159379 GGTAATTCTACCGACGGACGTT 60.159 50.000 23.38 10.01 38.43 3.99
719 762 2.730550 AATTCTACCGACGGACGTTT 57.269 45.000 23.38 0.00 40.78 3.60
720 763 2.730550 ATTCTACCGACGGACGTTTT 57.269 45.000 23.38 0.00 40.78 2.43
723 766 1.197721 TCTACCGACGGACGTTTTCTC 59.802 52.381 23.38 0.00 40.78 2.87
726 769 0.240411 CCGACGGACGTTTTCTCTCT 59.760 55.000 8.64 0.00 40.78 3.10
728 771 1.197264 CGACGGACGTTTTCTCTCTCT 59.803 52.381 0.00 0.00 37.22 3.10
729 772 2.350580 CGACGGACGTTTTCTCTCTCTT 60.351 50.000 0.00 0.00 37.22 2.85
730 773 3.236005 GACGGACGTTTTCTCTCTCTTC 58.764 50.000 0.00 0.00 0.00 2.87
731 774 2.243407 CGGACGTTTTCTCTCTCTTCG 58.757 52.381 0.00 0.00 0.00 3.79
732 775 2.350580 CGGACGTTTTCTCTCTCTTCGT 60.351 50.000 0.00 0.00 0.00 3.85
733 776 3.640592 GGACGTTTTCTCTCTCTTCGTT 58.359 45.455 0.00 0.00 0.00 3.85
735 778 4.538917 GACGTTTTCTCTCTCTTCGTTCT 58.461 43.478 0.00 0.00 0.00 3.01
736 779 4.538917 ACGTTTTCTCTCTCTTCGTTCTC 58.461 43.478 0.00 0.00 0.00 2.87
737 780 4.276431 ACGTTTTCTCTCTCTTCGTTCTCT 59.724 41.667 0.00 0.00 0.00 3.10
739 782 5.334569 CGTTTTCTCTCTCTTCGTTCTCTCT 60.335 44.000 0.00 0.00 0.00 3.10
742 785 3.517901 TCTCTCTCTTCGTTCTCTCTCCT 59.482 47.826 0.00 0.00 0.00 3.69
745 788 2.306219 TCTCTTCGTTCTCTCTCCTCCA 59.694 50.000 0.00 0.00 0.00 3.86
746 789 2.422127 CTCTTCGTTCTCTCTCCTCCAC 59.578 54.545 0.00 0.00 0.00 4.02
747 790 2.163509 CTTCGTTCTCTCTCCTCCACA 58.836 52.381 0.00 0.00 0.00 4.17
748 791 2.516227 TCGTTCTCTCTCCTCCACAT 57.484 50.000 0.00 0.00 0.00 3.21
750 793 2.095461 CGTTCTCTCTCCTCCACATCA 58.905 52.381 0.00 0.00 0.00 3.07
752 795 3.243367 CGTTCTCTCTCCTCCACATCATC 60.243 52.174 0.00 0.00 0.00 2.92
753 796 3.960102 GTTCTCTCTCCTCCACATCATCT 59.040 47.826 0.00 0.00 0.00 2.90
754 797 3.564264 TCTCTCTCCTCCACATCATCTG 58.436 50.000 0.00 0.00 0.00 2.90
755 798 3.203934 TCTCTCTCCTCCACATCATCTGA 59.796 47.826 0.00 0.00 0.00 3.27
756 799 3.959449 CTCTCTCCTCCACATCATCTGAA 59.041 47.826 0.00 0.00 0.00 3.02
757 800 4.356436 TCTCTCCTCCACATCATCTGAAA 58.644 43.478 0.00 0.00 0.00 2.69
758 801 4.967442 TCTCTCCTCCACATCATCTGAAAT 59.033 41.667 0.00 0.00 0.00 2.17
759 802 5.070180 TCTCTCCTCCACATCATCTGAAATC 59.930 44.000 0.00 0.00 0.00 2.17
761 804 4.042884 TCCTCCACATCATCTGAAATCCT 58.957 43.478 0.00 0.00 0.00 3.24
763 806 5.667172 TCCTCCACATCATCTGAAATCCTAA 59.333 40.000 0.00 0.00 0.00 2.69
764 807 6.331042 TCCTCCACATCATCTGAAATCCTAAT 59.669 38.462 0.00 0.00 0.00 1.73
765 808 7.002879 CCTCCACATCATCTGAAATCCTAATT 58.997 38.462 0.00 0.00 0.00 1.40
766 809 7.040617 CCTCCACATCATCTGAAATCCTAATTG 60.041 40.741 0.00 0.00 0.00 2.32
769 812 7.283807 CCACATCATCTGAAATCCTAATTGTCA 59.716 37.037 0.00 0.00 0.00 3.58
771 814 9.417561 ACATCATCTGAAATCCTAATTGTCATT 57.582 29.630 0.00 0.00 0.00 2.57
774 817 8.277197 TCATCTGAAATCCTAATTGTCATTCCT 58.723 33.333 0.00 0.00 0.00 3.36
776 819 7.632861 TCTGAAATCCTAATTGTCATTCCTCA 58.367 34.615 0.00 0.00 0.00 3.86
778 821 6.603201 TGAAATCCTAATTGTCATTCCTCACC 59.397 38.462 0.00 0.00 0.00 4.02
779 822 4.137116 TCCTAATTGTCATTCCTCACCG 57.863 45.455 0.00 0.00 0.00 4.94
780 823 3.772572 TCCTAATTGTCATTCCTCACCGA 59.227 43.478 0.00 0.00 0.00 4.69
781 824 3.871594 CCTAATTGTCATTCCTCACCGAC 59.128 47.826 0.00 0.00 0.00 4.79
782 825 3.417069 AATTGTCATTCCTCACCGACA 57.583 42.857 0.00 0.00 36.63 4.35
783 826 2.455674 TTGTCATTCCTCACCGACAG 57.544 50.000 0.00 0.00 39.39 3.51
784 827 0.037326 TGTCATTCCTCACCGACAGC 60.037 55.000 0.00 0.00 33.61 4.40
785 828 0.247736 GTCATTCCTCACCGACAGCT 59.752 55.000 0.00 0.00 0.00 4.24
787 830 0.247460 CATTCCTCACCGACAGCTGA 59.753 55.000 23.35 0.00 0.00 4.26
789 832 0.827925 TTCCTCACCGACAGCTGACT 60.828 55.000 23.35 0.00 0.00 3.41
790 833 0.037734 TCCTCACCGACAGCTGACTA 59.962 55.000 23.35 0.00 0.00 2.59
792 835 1.454201 CTCACCGACAGCTGACTAGA 58.546 55.000 23.35 10.83 0.00 2.43
794 837 0.881796 CACCGACAGCTGACTAGACA 59.118 55.000 23.35 0.00 0.00 3.41
798 841 0.523966 GACAGCTGACTAGACACGCT 59.476 55.000 23.35 11.24 0.00 5.07
799 842 0.962489 ACAGCTGACTAGACACGCTT 59.038 50.000 23.35 0.00 0.00 4.68
800 843 1.336332 ACAGCTGACTAGACACGCTTG 60.336 52.381 23.35 11.79 0.00 4.01
802 845 2.095212 CAGCTGACTAGACACGCTTGTA 60.095 50.000 8.42 0.00 35.47 2.41
806 849 3.833442 TGACTAGACACGCTTGTACATG 58.167 45.455 0.00 0.00 35.47 3.21
807 850 2.599082 GACTAGACACGCTTGTACATGC 59.401 50.000 20.73 20.73 35.47 4.06
808 851 2.029380 ACTAGACACGCTTGTACATGCA 60.029 45.455 27.33 10.67 35.47 3.96
829 872 2.041350 ACTAAGAGAGGTCGACCCTTCA 59.959 50.000 30.82 12.34 46.51 3.02
937 988 0.667792 GTCTGACCTTGTGACCGAGC 60.668 60.000 0.00 0.00 0.00 5.03
939 990 2.142357 CTGACCTTGTGACCGAGCGA 62.142 60.000 0.00 0.00 0.00 4.93
948 999 1.289380 GACCGAGCGAGGAAACAGT 59.711 57.895 7.50 0.00 34.73 3.55
958 1009 3.190953 GCGAGGAAACAGTAGTCAGTACT 59.809 47.826 0.00 0.00 43.31 2.73
1050 1101 1.833049 CCTATCCGGCGGTCTCCTT 60.833 63.158 27.32 7.58 0.00 3.36
1058 1109 2.678934 CGGTCTCCTTCCCCACGA 60.679 66.667 0.00 0.00 0.00 4.35
1095 1146 3.324108 TTCCTAACCGCCCGCCTT 61.324 61.111 0.00 0.00 0.00 4.35
1258 1310 0.755686 GGGTCCTTGATCGAGCTCAT 59.244 55.000 15.40 6.45 0.00 2.90
1261 1313 3.274288 GGTCCTTGATCGAGCTCATTTT 58.726 45.455 15.40 0.00 0.00 1.82
1344 1398 1.735920 CTGAGGTCAGTGCGTCAGC 60.736 63.158 17.88 0.00 42.07 4.26
1464 1519 4.111016 CGTCGGTGAGTGCGGCTA 62.111 66.667 0.00 0.00 0.00 3.93
1500 1555 4.039703 TCTGTCAAGTTCTTTCACGTACG 58.960 43.478 15.01 15.01 0.00 3.67
1578 1633 2.597805 AGAGGCGTGACGGTGTCT 60.598 61.111 7.25 0.00 33.15 3.41
1641 1696 2.595655 GAAGGTATTGGCCCGGCT 59.404 61.111 9.86 0.00 0.00 5.52
1688 1743 7.482654 CTGAACTCTATTTCAGTGTTTGTGA 57.517 36.000 4.94 0.00 45.12 3.58
1695 1750 3.852471 TTCAGTGTTTGTGATTCGTCG 57.148 42.857 0.00 0.00 0.00 5.12
1735 1790 4.279169 CCATCAGTTGTGATCCTTGTGTTT 59.721 41.667 0.00 0.00 41.85 2.83
1752 1807 4.286032 TGTGTTTATGTGTTCCCTAGAGCT 59.714 41.667 0.00 0.00 0.00 4.09
1765 1820 3.262420 CCTAGAGCTAACGTTGCATTGT 58.738 45.455 11.99 0.00 0.00 2.71
1799 1854 3.313012 TGGGTCAGTGATTGTCGTTAG 57.687 47.619 0.00 0.00 0.00 2.34
1817 1872 7.799447 TGTCGTTAGAAATGGTTTTCATTAACG 59.201 33.333 17.68 17.68 45.54 3.18
1841 1896 5.986501 TTAACAAATCATTACCACACCCC 57.013 39.130 0.00 0.00 0.00 4.95
1848 1903 2.167662 CATTACCACACCCCCTTGAAC 58.832 52.381 0.00 0.00 0.00 3.18
1867 1922 1.975680 ACGTGGTCATGTTAGTTCCCT 59.024 47.619 0.00 0.00 0.00 4.20
1921 1976 3.815856 TGCTTTGCCTGATTTTGTTGA 57.184 38.095 0.00 0.00 0.00 3.18
1940 1995 5.156355 GTTGATTGTATTGTTCTGTGCTGG 58.844 41.667 0.00 0.00 0.00 4.85
2010 2066 1.464198 AGGGACTGGAAGCAACCCT 60.464 57.895 0.00 0.00 45.85 4.34
2048 2104 9.979578 AATGTTGCACTTGAGATTACATTTTAA 57.020 25.926 2.55 0.00 32.55 1.52
2123 2184 7.092716 ACTTCACATTATTGCACCATTTTCTC 58.907 34.615 0.00 0.00 0.00 2.87
2199 2419 5.565439 GCCAATTGCAACAACTAGAATGAGT 60.565 40.000 0.00 0.00 40.77 3.41
2222 2442 6.207417 AGTTTGAATCACACCCAAGTTGATAG 59.793 38.462 3.87 0.00 0.00 2.08
2231 2451 5.221843 ACACCCAAGTTGATAGCAGTAGAAA 60.222 40.000 3.87 0.00 0.00 2.52
2232 2452 5.122396 CACCCAAGTTGATAGCAGTAGAAAC 59.878 44.000 3.87 0.00 0.00 2.78
2233 2453 4.636206 CCCAAGTTGATAGCAGTAGAAACC 59.364 45.833 3.87 0.00 0.00 3.27
2234 2454 5.245531 CCAAGTTGATAGCAGTAGAAACCA 58.754 41.667 3.87 0.00 0.00 3.67
2235 2455 5.352569 CCAAGTTGATAGCAGTAGAAACCAG 59.647 44.000 3.87 0.00 0.00 4.00
2236 2456 5.091261 AGTTGATAGCAGTAGAAACCAGG 57.909 43.478 0.00 0.00 0.00 4.45
2237 2457 4.532521 AGTTGATAGCAGTAGAAACCAGGT 59.467 41.667 0.00 0.00 0.00 4.00
2296 2516 6.023603 AGTACCTTCCTCTCTTACATTTCCA 58.976 40.000 0.00 0.00 0.00 3.53
2321 2541 9.846248 CATTCTTGTTTTATTTAGGTCCTTGAG 57.154 33.333 0.00 0.00 0.00 3.02
2532 2902 2.509548 TGGGAAAGTGGATACCCATGAG 59.490 50.000 0.00 0.00 46.04 2.90
2600 2971 3.305608 GCAACAACTTCAGGAGGAAATGG 60.306 47.826 0.00 0.00 34.44 3.16
2906 3707 9.621629 TCCTGAAAAAGAAAGTACACATCTTTA 57.378 29.630 16.16 5.49 41.28 1.85
2950 3751 7.273712 AGCTGATCATAGCATCGAAATGATAT 58.726 34.615 9.38 4.04 43.51 1.63
2982 3867 8.475639 TCTCTGTGATACAAATAGTTACCTTCC 58.524 37.037 0.00 0.00 0.00 3.46
3002 3887 8.552296 ACCTTCCTTCTCTATGATACAATTTGT 58.448 33.333 7.30 7.30 0.00 2.83
3020 3905 9.030301 ACAATTTGTTTTGCTGTTCACTTATAC 57.970 29.630 0.00 0.00 0.00 1.47
3024 3909 9.891828 TTTGTTTTGCTGTTCACTTATACATAG 57.108 29.630 0.00 0.00 0.00 2.23
3067 3953 4.223700 TGCTGTCCATTCTGTGTATCTCTT 59.776 41.667 0.00 0.00 0.00 2.85
3174 4060 1.281867 ACTGGAGAAATTGGCGATGGA 59.718 47.619 0.00 0.00 0.00 3.41
3194 4080 7.011389 CGATGGAAAGATATTCTGTAAGTGCAA 59.989 37.037 0.00 0.00 33.76 4.08
3230 4116 5.220710 ACTGTTAGAAGTCTGCAATCACT 57.779 39.130 0.00 0.00 0.00 3.41
3235 4121 3.924144 AGAAGTCTGCAATCACTCTGTC 58.076 45.455 0.00 0.00 0.00 3.51
3254 4140 6.713276 TCTGTCGGGTTTAATCTTATTTCCA 58.287 36.000 0.00 0.00 0.00 3.53
3283 4169 8.380644 CAGTCGTTACTGTCATTTAGTATTTGG 58.619 37.037 0.00 0.00 46.76 3.28
3296 4182 7.759489 TTTAGTATTTGGCACTCTGAAATGT 57.241 32.000 0.00 0.00 0.00 2.71
3297 4183 8.856153 TTTAGTATTTGGCACTCTGAAATGTA 57.144 30.769 0.00 0.00 0.00 2.29
3305 4191 6.398095 TGGCACTCTGAAATGTATATATCCG 58.602 40.000 0.00 0.00 0.00 4.18
3306 4192 5.292101 GGCACTCTGAAATGTATATATCCGC 59.708 44.000 0.00 0.00 0.00 5.54
3307 4193 5.869344 GCACTCTGAAATGTATATATCCGCA 59.131 40.000 0.00 0.00 0.00 5.69
3308 4194 6.035435 GCACTCTGAAATGTATATATCCGCAG 59.965 42.308 0.00 0.00 0.00 5.18
3310 4196 7.274468 CACTCTGAAATGTATATATCCGCAGAC 59.726 40.741 0.00 0.00 0.00 3.51
3311 4197 6.322491 TCTGAAATGTATATATCCGCAGACG 58.678 40.000 0.00 0.00 39.67 4.18
3329 4215 5.006746 GCAGACGGTTATCTTATTTCCACAG 59.993 44.000 0.00 0.00 0.00 3.66
3348 4234 1.020437 GTACCGAACTACTCCCTCCG 58.980 60.000 0.00 0.00 0.00 4.63
3356 4242 4.024218 CGAACTACTCCCTCCGTAACATAG 60.024 50.000 0.00 0.00 0.00 2.23
3360 4246 6.237154 ACTACTCCCTCCGTAACATAGTATC 58.763 44.000 0.00 0.00 0.00 2.24
3361 4247 4.405548 ACTCCCTCCGTAACATAGTATCC 58.594 47.826 0.00 0.00 0.00 2.59
3362 4248 3.762823 CTCCCTCCGTAACATAGTATCCC 59.237 52.174 0.00 0.00 0.00 3.85
3364 4250 3.899360 CCCTCCGTAACATAGTATCCCAA 59.101 47.826 0.00 0.00 0.00 4.12
3600 4600 0.963856 TCGCGTCCTCCTTCTAGCAA 60.964 55.000 5.77 0.00 0.00 3.91
3632 4632 1.250328 CAATGCTTTCCCACAGCTGA 58.750 50.000 23.35 0.00 38.19 4.26
3633 4633 1.822990 CAATGCTTTCCCACAGCTGAT 59.177 47.619 23.35 1.19 38.19 2.90
3672 4672 8.644374 AACCTAGGAATCATGATCTCTAGTAC 57.356 38.462 26.51 9.57 0.00 2.73
3674 4674 8.107095 ACCTAGGAATCATGATCTCTAGTACTC 58.893 40.741 26.51 13.54 0.00 2.59
3676 4676 6.252995 AGGAATCATGATCTCTAGTACTCCC 58.747 44.000 9.06 0.00 0.00 4.30
3677 4677 6.046643 AGGAATCATGATCTCTAGTACTCCCT 59.953 42.308 9.06 0.00 0.00 4.20
3678 4678 6.377146 GGAATCATGATCTCTAGTACTCCCTC 59.623 46.154 9.06 0.00 0.00 4.30
3679 4679 5.249780 TCATGATCTCTAGTACTCCCTCC 57.750 47.826 0.00 0.00 0.00 4.30
3680 4680 4.665483 TCATGATCTCTAGTACTCCCTCCA 59.335 45.833 0.00 0.00 0.00 3.86
3681 4681 5.314573 TCATGATCTCTAGTACTCCCTCCAT 59.685 44.000 0.00 0.00 0.00 3.41
3682 4682 5.249780 TGATCTCTAGTACTCCCTCCATC 57.750 47.826 0.00 0.00 0.00 3.51
3683 4683 4.043561 TGATCTCTAGTACTCCCTCCATCC 59.956 50.000 0.00 0.00 0.00 3.51
3684 4684 2.717515 TCTCTAGTACTCCCTCCATCCC 59.282 54.545 0.00 0.00 0.00 3.85
3685 4685 2.447429 CTCTAGTACTCCCTCCATCCCA 59.553 54.545 0.00 0.00 0.00 4.37
3686 4686 2.863238 TCTAGTACTCCCTCCATCCCAA 59.137 50.000 0.00 0.00 0.00 4.12
3687 4687 2.661176 AGTACTCCCTCCATCCCAAA 57.339 50.000 0.00 0.00 0.00 3.28
3688 4688 2.929301 AGTACTCCCTCCATCCCAAAA 58.071 47.619 0.00 0.00 0.00 2.44
3689 4689 3.474920 AGTACTCCCTCCATCCCAAAAT 58.525 45.455 0.00 0.00 0.00 1.82
3690 4690 3.858638 AGTACTCCCTCCATCCCAAAATT 59.141 43.478 0.00 0.00 0.00 1.82
3691 4691 3.388552 ACTCCCTCCATCCCAAAATTC 57.611 47.619 0.00 0.00 0.00 2.17
3692 4692 2.929043 ACTCCCTCCATCCCAAAATTCT 59.071 45.455 0.00 0.00 0.00 2.40
3693 4693 3.337909 ACTCCCTCCATCCCAAAATTCTT 59.662 43.478 0.00 0.00 0.00 2.52
3694 4694 3.703052 CTCCCTCCATCCCAAAATTCTTG 59.297 47.826 0.00 0.00 0.00 3.02
3695 4695 3.077391 TCCCTCCATCCCAAAATTCTTGT 59.923 43.478 0.00 0.00 0.00 3.16
3696 4696 3.448660 CCCTCCATCCCAAAATTCTTGTC 59.551 47.826 0.00 0.00 0.00 3.18
3697 4697 4.347607 CCTCCATCCCAAAATTCTTGTCT 58.652 43.478 0.00 0.00 0.00 3.41
3698 4698 4.774200 CCTCCATCCCAAAATTCTTGTCTT 59.226 41.667 0.00 0.00 0.00 3.01
3699 4699 5.951747 CCTCCATCCCAAAATTCTTGTCTTA 59.048 40.000 0.00 0.00 0.00 2.10
3700 4700 6.096001 CCTCCATCCCAAAATTCTTGTCTTAG 59.904 42.308 0.00 0.00 0.00 2.18
3701 4701 6.789268 TCCATCCCAAAATTCTTGTCTTAGA 58.211 36.000 0.00 0.00 0.00 2.10
3702 4702 7.413446 TCCATCCCAAAATTCTTGTCTTAGAT 58.587 34.615 0.00 0.00 0.00 1.98
3703 4703 7.895429 TCCATCCCAAAATTCTTGTCTTAGATT 59.105 33.333 0.00 0.00 0.00 2.40
3704 4704 8.534496 CCATCCCAAAATTCTTGTCTTAGATTT 58.466 33.333 0.00 0.00 0.00 2.17
3705 4705 9.362539 CATCCCAAAATTCTTGTCTTAGATTTG 57.637 33.333 0.00 0.00 29.84 2.32
3706 4706 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
3707 4707 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3708 4708 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3716 4716 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
3717 4717 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
3718 4718 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
3719 4719 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
3720 4720 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
3721 4721 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
3722 4722 9.828852 CTTAGATTTGTCTAGATACGGATGTAC 57.171 37.037 0.00 0.00 32.26 2.90
3723 4723 7.216973 AGATTTGTCTAGATACGGATGTACC 57.783 40.000 0.00 0.00 32.26 3.34
3724 4724 7.005296 AGATTTGTCTAGATACGGATGTACCT 58.995 38.462 0.00 0.00 36.31 3.08
3725 4725 8.162085 AGATTTGTCTAGATACGGATGTACCTA 58.838 37.037 0.00 0.00 36.31 3.08
3726 4726 8.701908 ATTTGTCTAGATACGGATGTACCTAA 57.298 34.615 0.00 0.00 36.31 2.69
3727 4727 8.701908 TTTGTCTAGATACGGATGTACCTAAT 57.298 34.615 0.00 0.00 36.31 1.73
3728 4728 9.797642 TTTGTCTAGATACGGATGTACCTAATA 57.202 33.333 0.00 0.00 36.31 0.98
3729 4729 8.783833 TGTCTAGATACGGATGTACCTAATAC 57.216 38.462 0.00 0.00 36.31 1.89
3730 4730 8.600668 TGTCTAGATACGGATGTACCTAATACT 58.399 37.037 0.00 0.00 34.56 2.12
3738 4738 8.937634 ACGGATGTACCTAATACTAAAACTTG 57.062 34.615 0.00 0.00 34.56 3.16
3739 4739 8.752187 ACGGATGTACCTAATACTAAAACTTGA 58.248 33.333 0.00 0.00 34.56 3.02
3740 4740 9.028185 CGGATGTACCTAATACTAAAACTTGAC 57.972 37.037 0.00 0.00 34.56 3.18
3752 4752 7.596749 ACTAAAACTTGACTTGATACATCCG 57.403 36.000 0.00 0.00 0.00 4.18
3753 4753 7.159372 ACTAAAACTTGACTTGATACATCCGT 58.841 34.615 0.00 0.00 0.00 4.69
3754 4754 8.308931 ACTAAAACTTGACTTGATACATCCGTA 58.691 33.333 0.00 0.00 0.00 4.02
3755 4755 9.314321 CTAAAACTTGACTTGATACATCCGTAT 57.686 33.333 0.00 0.00 41.16 3.06
3756 4756 8.561738 AAAACTTGACTTGATACATCCGTATT 57.438 30.769 0.00 0.00 38.48 1.89
3757 4757 8.561738 AAACTTGACTTGATACATCCGTATTT 57.438 30.769 0.00 0.00 38.48 1.40
3758 4758 9.661563 AAACTTGACTTGATACATCCGTATTTA 57.338 29.630 0.00 0.00 38.48 1.40
3759 4759 8.873215 ACTTGACTTGATACATCCGTATTTAG 57.127 34.615 0.00 0.00 38.48 1.85
3760 4760 8.692710 ACTTGACTTGATACATCCGTATTTAGA 58.307 33.333 0.00 0.00 38.48 2.10
3761 4761 8.867112 TTGACTTGATACATCCGTATTTAGAC 57.133 34.615 0.00 0.00 38.48 2.59
3762 4762 8.002984 TGACTTGATACATCCGTATTTAGACA 57.997 34.615 0.00 0.00 38.48 3.41
3763 4763 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
3764 4764 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
3765 4765 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
3772 4772 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
3773 4773 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
3775 4775 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
3776 4776 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
3784 4784 9.354673 AGACAAATCTAAGACAAGAATTTTGGA 57.645 29.630 0.00 0.00 33.04 3.53
3785 4785 9.965824 GACAAATCTAAGACAAGAATTTTGGAA 57.034 29.630 0.00 0.00 33.04 3.53
3786 4786 9.750125 ACAAATCTAAGACAAGAATTTTGGAAC 57.250 29.630 0.00 0.00 33.04 3.62
3787 4787 8.905702 CAAATCTAAGACAAGAATTTTGGAACG 58.094 33.333 5.68 0.00 28.49 3.95
3788 4788 6.554334 TCTAAGACAAGAATTTTGGAACGG 57.446 37.500 0.00 0.00 0.00 4.44
3789 4789 6.292923 TCTAAGACAAGAATTTTGGAACGGA 58.707 36.000 0.00 0.00 0.00 4.69
3790 4790 5.438761 AAGACAAGAATTTTGGAACGGAG 57.561 39.130 0.00 0.00 0.00 4.63
3791 4791 3.821033 AGACAAGAATTTTGGAACGGAGG 59.179 43.478 0.00 0.00 0.00 4.30
3792 4792 2.890945 ACAAGAATTTTGGAACGGAGGG 59.109 45.455 0.00 0.00 0.00 4.30
3793 4793 3.153919 CAAGAATTTTGGAACGGAGGGA 58.846 45.455 0.00 0.00 0.00 4.20
3794 4794 3.073274 AGAATTTTGGAACGGAGGGAG 57.927 47.619 0.00 0.00 0.00 4.30
3795 4795 2.375509 AGAATTTTGGAACGGAGGGAGT 59.624 45.455 0.00 0.00 0.00 3.85
3796 4796 3.585732 AGAATTTTGGAACGGAGGGAGTA 59.414 43.478 0.00 0.00 0.00 2.59
3839 4839 4.842948 TGATCTCTATGCTTAGGCCTCATT 59.157 41.667 9.68 0.00 37.74 2.57
3890 4890 1.081242 GTCGCGGACGTTGTAAGGA 60.081 57.895 6.13 0.00 41.18 3.36
3929 4929 4.147449 TGCACGCGGAGAGGATGG 62.147 66.667 12.47 0.00 0.00 3.51
3970 4970 1.275421 TGCCCCCGGTGATCACAATA 61.275 55.000 26.47 3.48 0.00 1.90
3982 4982 7.147976 CGGTGATCACAATATCATGAGTAGAA 58.852 38.462 26.47 0.00 38.13 2.10
3985 4985 9.190858 GTGATCACAATATCATGAGTAGAACTC 57.809 37.037 21.07 0.01 38.13 3.01
4010 5010 1.297664 CTCTTGCTGCCTGTATCTGC 58.702 55.000 0.00 0.00 0.00 4.26
4051 5052 2.715005 CTTGTGGCCGTGTGTGTG 59.285 61.111 0.00 0.00 0.00 3.82
4073 5074 4.017037 TGGCTTGACCTTTGGGGAATAATA 60.017 41.667 0.00 0.00 40.22 0.98
4074 5075 4.959839 GGCTTGACCTTTGGGGAATAATAA 59.040 41.667 0.00 0.00 38.76 1.40
4087 5088 9.922477 TTGGGGAATAATAATGTGTATGTAACA 57.078 29.630 0.00 0.00 35.06 2.41
4156 5159 2.268076 GGGTGGCGTTGCTGAATGT 61.268 57.895 0.00 0.00 0.00 2.71
4181 5184 0.533308 TTACTGTGGTTCGTGTGCCC 60.533 55.000 0.00 0.00 0.00 5.36
4187 5190 1.285641 GGTTCGTGTGCCCAATGTG 59.714 57.895 0.00 0.00 0.00 3.21
4192 5195 1.659794 GTGTGCCCAATGTGGTGAC 59.340 57.895 0.00 0.00 35.17 3.67
4256 5259 2.169832 TGTGCCAGTTCAGTCTAAGC 57.830 50.000 0.00 0.00 0.00 3.09
4264 5267 5.391416 GCCAGTTCAGTCTAAGCTTCATTTC 60.391 44.000 0.00 0.00 0.00 2.17
4282 5288 0.966875 TCCTTTCGCGTGGCTAGGTA 60.967 55.000 5.77 0.00 0.00 3.08
4291 5297 2.662700 CGTGGCTAGGTATCAATCGAC 58.337 52.381 0.00 0.00 0.00 4.20
4300 5306 3.066900 AGGTATCAATCGACCGAGACTTG 59.933 47.826 9.70 0.00 40.91 3.16
4302 5308 4.261656 GGTATCAATCGACCGAGACTTGAT 60.262 45.833 17.91 17.91 39.28 2.57
4303 5309 3.868757 TCAATCGACCGAGACTTGATT 57.131 42.857 0.00 0.00 0.00 2.57
4325 5335 2.632377 AGTCCCAAGCGACATAACATG 58.368 47.619 0.00 0.00 35.07 3.21
4326 5336 1.670811 GTCCCAAGCGACATAACATGG 59.329 52.381 0.00 0.00 32.74 3.66
4331 5341 4.414852 CCAAGCGACATAACATGGAAAAG 58.585 43.478 0.00 0.00 33.60 2.27
4333 5343 5.335583 CCAAGCGACATAACATGGAAAAGAA 60.336 40.000 0.00 0.00 33.60 2.52
4338 5348 7.872483 AGCGACATAACATGGAAAAGAAAATTT 59.128 29.630 0.00 0.00 33.60 1.82
4339 5349 8.495148 GCGACATAACATGGAAAAGAAAATTTT 58.505 29.630 2.28 2.28 33.60 1.82
4341 5351 9.597999 GACATAACATGGAAAAGAAAATTTTGC 57.402 29.630 8.47 0.42 33.60 3.68
4342 5352 9.118300 ACATAACATGGAAAAGAAAATTTTGCA 57.882 25.926 8.47 9.24 42.34 4.08
4344 5354 6.046885 ACATGGAAAAGAAAATTTTGCACG 57.953 33.333 8.47 4.61 41.29 5.34
4345 5355 5.007528 ACATGGAAAAGAAAATTTTGCACGG 59.992 36.000 8.47 7.62 41.29 4.94
4346 5356 4.759782 TGGAAAAGAAAATTTTGCACGGA 58.240 34.783 8.47 0.00 35.36 4.69
4347 5357 5.363939 TGGAAAAGAAAATTTTGCACGGAT 58.636 33.333 8.47 0.00 35.36 4.18
4348 5358 6.516718 TGGAAAAGAAAATTTTGCACGGATA 58.483 32.000 8.47 0.00 35.36 2.59
4349 5359 6.986817 TGGAAAAGAAAATTTTGCACGGATAA 59.013 30.769 8.47 0.00 35.36 1.75
4354 5364 8.600449 AAGAAAATTTTGCACGGATAAAATCA 57.400 26.923 8.47 0.00 35.94 2.57
4421 5432 7.926018 AGCAAGTTGTTTCCTTTTAACTTATGG 59.074 33.333 4.48 0.00 40.32 2.74
4422 5433 7.170828 GCAAGTTGTTTCCTTTTAACTTATGGG 59.829 37.037 4.48 0.00 40.32 4.00
4424 5435 8.178313 AGTTGTTTCCTTTTAACTTATGGGAG 57.822 34.615 0.00 0.00 29.65 4.30
4425 5436 7.783119 AGTTGTTTCCTTTTAACTTATGGGAGT 59.217 33.333 0.00 0.00 29.65 3.85
4428 5439 7.780745 TGTTTCCTTTTAACTTATGGGAGTGAA 59.219 33.333 0.00 0.00 0.00 3.18
4431 5442 8.348285 TCCTTTTAACTTATGGGAGTGAATTG 57.652 34.615 0.00 0.00 0.00 2.32
4433 5444 8.244113 CCTTTTAACTTATGGGAGTGAATTGTC 58.756 37.037 0.00 0.00 0.00 3.18
4436 5447 8.698973 TTAACTTATGGGAGTGAATTGTCAAA 57.301 30.769 0.00 0.00 34.87 2.69
4437 5448 7.595819 AACTTATGGGAGTGAATTGTCAAAA 57.404 32.000 0.00 0.00 34.87 2.44
4470 8723 0.392998 ACGGGAGTGATTGACATGGC 60.393 55.000 0.00 0.00 44.82 4.40
4491 8744 2.202797 CCGCCTCCATCAGACACG 60.203 66.667 0.00 0.00 0.00 4.49
4493 8746 1.807165 CGCCTCCATCAGACACGTG 60.807 63.158 15.48 15.48 0.00 4.49
4517 8801 0.464735 CGTCGAGGGATCTGGACTCT 60.465 60.000 0.00 0.00 43.64 3.24
4522 8806 1.758514 GGGATCTGGACTCTCGCCA 60.759 63.158 0.00 0.00 0.00 5.69
4552 8841 2.895039 CGTGACGTACAGGCAAGTT 58.105 52.632 0.00 0.00 41.33 2.66
4572 8861 1.436195 GACTTCCAGTTGTGCGTGCA 61.436 55.000 0.00 0.00 0.00 4.57
4573 8862 1.009675 CTTCCAGTTGTGCGTGCAC 60.010 57.895 17.72 17.72 46.33 4.57
4574 8863 1.439353 CTTCCAGTTGTGCGTGCACT 61.439 55.000 23.86 3.04 46.30 4.40
4599 8888 1.086634 GGACATGAGTCGGCTGAAGC 61.087 60.000 0.00 0.00 45.92 3.86
4604 8893 1.098869 TGAGTCGGCTGAAGCTAGAG 58.901 55.000 0.00 0.00 41.70 2.43
4616 9029 1.783071 AGCTAGAGGTTGGTAGGAGC 58.217 55.000 0.00 0.00 0.00 4.70
4619 9032 2.457598 CTAGAGGTTGGTAGGAGCACA 58.542 52.381 0.00 0.00 0.00 4.57
4767 9192 2.344441 ACACGATGACAAGCGAAATACG 59.656 45.455 7.90 0.00 45.66 3.06
4803 9228 4.586841 GGCACCAGCAATATAATTACCCAA 59.413 41.667 0.00 0.00 44.61 4.12
4818 9243 3.984508 ACCCAAGTCATATCTACGTCG 57.015 47.619 0.00 0.00 0.00 5.12
4819 9244 3.548770 ACCCAAGTCATATCTACGTCGA 58.451 45.455 0.00 0.00 0.00 4.20
4821 9246 4.583489 ACCCAAGTCATATCTACGTCGAAT 59.417 41.667 0.00 0.00 0.00 3.34
4823 9248 6.263842 ACCCAAGTCATATCTACGTCGAATAA 59.736 38.462 0.00 0.00 0.00 1.40
4824 9249 6.581542 CCCAAGTCATATCTACGTCGAATAAC 59.418 42.308 0.00 0.00 0.00 1.89
4825 9250 6.581542 CCAAGTCATATCTACGTCGAATAACC 59.418 42.308 0.00 0.00 0.00 2.85
4826 9251 7.361127 CAAGTCATATCTACGTCGAATAACCT 58.639 38.462 0.00 0.00 0.00 3.50
4829 9255 9.060347 AGTCATATCTACGTCGAATAACCTTTA 57.940 33.333 0.00 0.00 0.00 1.85
4841 9267 0.613777 AACCTTTACCTCGGAGCAGG 59.386 55.000 0.00 4.59 39.80 4.85
4869 9295 2.296471 AGTTGACGTACCTGAACCTGAG 59.704 50.000 0.00 0.00 0.00 3.35
4874 9300 0.389948 GTACCTGAACCTGAGCACGG 60.390 60.000 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 31 3.305471 GGGCAGGTATCTTAGCGACTTAG 60.305 52.174 0.00 0.00 0.00 2.18
112 116 2.307098 ACCACAGCTAAGATCTTGCCTT 59.693 45.455 18.47 6.62 0.00 4.35
356 365 3.069158 AGAGTACTTAATGCCGGCGTTAT 59.931 43.478 35.25 25.62 0.00 1.89
399 409 2.033299 CGCAACGGCCAGATATTCATTT 59.967 45.455 2.24 0.00 36.38 2.32
550 593 1.150560 ACCTACACACCCTACCCAAGA 59.849 52.381 0.00 0.00 0.00 3.02
643 686 0.320421 GACAGCCTTCTACCGTTGCA 60.320 55.000 0.00 0.00 0.00 4.08
644 687 0.037232 AGACAGCCTTCTACCGTTGC 60.037 55.000 0.00 0.00 0.00 4.17
647 690 2.093106 CTACAGACAGCCTTCTACCGT 58.907 52.381 0.00 0.00 0.00 4.83
649 692 1.202313 CGCTACAGACAGCCTTCTACC 60.202 57.143 0.00 0.00 38.37 3.18
651 694 1.743958 GTCGCTACAGACAGCCTTCTA 59.256 52.381 0.00 0.00 40.65 2.10
653 696 0.458716 GGTCGCTACAGACAGCCTTC 60.459 60.000 0.00 0.00 42.62 3.46
654 697 1.592223 GGTCGCTACAGACAGCCTT 59.408 57.895 0.00 0.00 42.62 4.35
655 698 2.701780 CGGTCGCTACAGACAGCCT 61.702 63.158 0.00 0.00 42.62 4.58
656 699 2.202623 CGGTCGCTACAGACAGCC 60.203 66.667 0.00 0.00 42.62 4.85
658 701 0.456221 AATCCGGTCGCTACAGACAG 59.544 55.000 0.00 0.00 42.62 3.51
659 702 0.892755 AAATCCGGTCGCTACAGACA 59.107 50.000 0.00 0.00 42.62 3.41
662 705 2.284417 GCTAAAAATCCGGTCGCTACAG 59.716 50.000 0.00 0.00 0.00 2.74
663 706 2.273557 GCTAAAAATCCGGTCGCTACA 58.726 47.619 0.00 0.00 0.00 2.74
664 707 1.257155 CGCTAAAAATCCGGTCGCTAC 59.743 52.381 0.00 0.00 0.00 3.58
666 709 1.702491 GCGCTAAAAATCCGGTCGCT 61.702 55.000 0.00 0.00 38.29 4.93
667 710 1.297378 GCGCTAAAAATCCGGTCGC 60.297 57.895 0.00 1.56 0.00 5.19
670 713 2.093869 TCTGTAGCGCTAAAAATCCGGT 60.094 45.455 20.73 0.00 36.59 5.28
671 714 2.546778 TCTGTAGCGCTAAAAATCCGG 58.453 47.619 20.73 10.75 0.00 5.14
673 716 5.931441 ATGATCTGTAGCGCTAAAAATCC 57.069 39.130 20.73 6.09 0.00 3.01
674 717 6.138761 CCAATGATCTGTAGCGCTAAAAATC 58.861 40.000 20.73 16.43 0.00 2.17
675 718 5.590259 ACCAATGATCTGTAGCGCTAAAAAT 59.410 36.000 20.73 5.76 0.00 1.82
676 719 4.941263 ACCAATGATCTGTAGCGCTAAAAA 59.059 37.500 20.73 0.00 0.00 1.94
677 720 4.513442 ACCAATGATCTGTAGCGCTAAAA 58.487 39.130 20.73 9.85 0.00 1.52
678 721 4.137116 ACCAATGATCTGTAGCGCTAAA 57.863 40.909 20.73 13.83 0.00 1.85
679 722 3.819564 ACCAATGATCTGTAGCGCTAA 57.180 42.857 20.73 3.83 0.00 3.09
680 723 4.929819 TTACCAATGATCTGTAGCGCTA 57.070 40.909 14.45 14.45 0.00 4.26
681 724 3.819564 TTACCAATGATCTGTAGCGCT 57.180 42.857 17.26 17.26 0.00 5.92
682 725 4.752101 AGAATTACCAATGATCTGTAGCGC 59.248 41.667 0.00 0.00 0.00 5.92
683 726 7.339732 GTAGAATTACCAATGATCTGTAGCG 57.660 40.000 0.00 0.00 0.00 4.26
699 742 3.848272 AAACGTCCGTCGGTAGAATTA 57.152 42.857 11.88 0.00 44.69 1.40
700 743 2.730550 AAACGTCCGTCGGTAGAATT 57.269 45.000 11.88 5.24 44.69 2.17
701 744 2.229784 AGAAAACGTCCGTCGGTAGAAT 59.770 45.455 11.88 0.00 44.69 2.40
702 745 1.608590 AGAAAACGTCCGTCGGTAGAA 59.391 47.619 11.88 0.00 44.69 2.10
703 746 1.197721 GAGAAAACGTCCGTCGGTAGA 59.802 52.381 11.88 0.00 44.69 2.59
704 747 1.198637 AGAGAAAACGTCCGTCGGTAG 59.801 52.381 11.88 9.08 44.69 3.18
705 748 1.197721 GAGAGAAAACGTCCGTCGGTA 59.802 52.381 11.88 0.00 44.69 4.02
707 750 0.240411 AGAGAGAAAACGTCCGTCGG 59.760 55.000 4.39 4.39 44.69 4.79
711 754 2.243407 CGAAGAGAGAGAAAACGTCCG 58.757 52.381 0.00 0.00 0.00 4.79
712 755 3.285816 ACGAAGAGAGAGAAAACGTCC 57.714 47.619 0.00 0.00 0.00 4.79
713 756 4.538917 AGAACGAAGAGAGAGAAAACGTC 58.461 43.478 0.00 0.00 0.00 4.34
714 757 4.276431 AGAGAACGAAGAGAGAGAAAACGT 59.724 41.667 0.00 0.00 0.00 3.99
716 759 6.009115 AGAGAGAACGAAGAGAGAGAAAAC 57.991 41.667 0.00 0.00 0.00 2.43
717 760 5.182380 GGAGAGAGAACGAAGAGAGAGAAAA 59.818 44.000 0.00 0.00 0.00 2.29
718 761 4.698304 GGAGAGAGAACGAAGAGAGAGAAA 59.302 45.833 0.00 0.00 0.00 2.52
719 762 4.019681 AGGAGAGAGAACGAAGAGAGAGAA 60.020 45.833 0.00 0.00 0.00 2.87
720 763 3.517901 AGGAGAGAGAACGAAGAGAGAGA 59.482 47.826 0.00 0.00 0.00 3.10
723 766 2.943033 GGAGGAGAGAGAACGAAGAGAG 59.057 54.545 0.00 0.00 0.00 3.20
726 769 2.224793 TGTGGAGGAGAGAGAACGAAGA 60.225 50.000 0.00 0.00 0.00 2.87
728 771 2.287977 TGTGGAGGAGAGAGAACGAA 57.712 50.000 0.00 0.00 0.00 3.85
729 772 2.290960 TGATGTGGAGGAGAGAGAACGA 60.291 50.000 0.00 0.00 0.00 3.85
730 773 2.095461 TGATGTGGAGGAGAGAGAACG 58.905 52.381 0.00 0.00 0.00 3.95
731 774 3.960102 AGATGATGTGGAGGAGAGAGAAC 59.040 47.826 0.00 0.00 0.00 3.01
732 775 3.959449 CAGATGATGTGGAGGAGAGAGAA 59.041 47.826 0.00 0.00 0.00 2.87
733 776 3.203934 TCAGATGATGTGGAGGAGAGAGA 59.796 47.826 0.00 0.00 0.00 3.10
735 778 3.677156 TCAGATGATGTGGAGGAGAGA 57.323 47.619 0.00 0.00 0.00 3.10
736 779 4.750021 TTTCAGATGATGTGGAGGAGAG 57.250 45.455 0.00 0.00 0.00 3.20
737 780 4.102210 GGATTTCAGATGATGTGGAGGAGA 59.898 45.833 0.00 0.00 0.00 3.71
739 782 4.042884 AGGATTTCAGATGATGTGGAGGA 58.957 43.478 0.00 0.00 0.00 3.71
742 785 7.348815 ACAATTAGGATTTCAGATGATGTGGA 58.651 34.615 0.00 0.00 0.00 4.02
745 788 8.991783 ATGACAATTAGGATTTCAGATGATGT 57.008 30.769 0.00 0.00 0.00 3.06
746 789 9.894783 GAATGACAATTAGGATTTCAGATGATG 57.105 33.333 0.00 0.00 0.00 3.07
747 790 9.075678 GGAATGACAATTAGGATTTCAGATGAT 57.924 33.333 0.00 0.00 0.00 2.45
748 791 8.277197 AGGAATGACAATTAGGATTTCAGATGA 58.723 33.333 0.00 0.00 0.00 2.92
750 793 8.277197 TGAGGAATGACAATTAGGATTTCAGAT 58.723 33.333 0.00 0.00 0.00 2.90
752 795 7.201767 GGTGAGGAATGACAATTAGGATTTCAG 60.202 40.741 0.00 0.00 0.00 3.02
753 796 6.603201 GGTGAGGAATGACAATTAGGATTTCA 59.397 38.462 0.00 0.00 0.00 2.69
754 797 6.238484 CGGTGAGGAATGACAATTAGGATTTC 60.238 42.308 0.00 0.00 0.00 2.17
755 798 5.590259 CGGTGAGGAATGACAATTAGGATTT 59.410 40.000 0.00 0.00 0.00 2.17
756 799 5.104527 TCGGTGAGGAATGACAATTAGGATT 60.105 40.000 0.00 0.00 0.00 3.01
757 800 4.408921 TCGGTGAGGAATGACAATTAGGAT 59.591 41.667 0.00 0.00 0.00 3.24
758 801 3.772572 TCGGTGAGGAATGACAATTAGGA 59.227 43.478 0.00 0.00 0.00 2.94
759 802 3.871594 GTCGGTGAGGAATGACAATTAGG 59.128 47.826 0.00 0.00 0.00 2.69
761 804 4.503910 CTGTCGGTGAGGAATGACAATTA 58.496 43.478 0.00 0.00 40.50 1.40
763 806 2.936993 GCTGTCGGTGAGGAATGACAAT 60.937 50.000 0.00 0.00 40.50 2.71
764 807 1.608025 GCTGTCGGTGAGGAATGACAA 60.608 52.381 0.00 0.00 40.50 3.18
765 808 0.037326 GCTGTCGGTGAGGAATGACA 60.037 55.000 0.00 0.00 38.91 3.58
766 809 0.247736 AGCTGTCGGTGAGGAATGAC 59.752 55.000 0.00 0.00 0.00 3.06
769 812 2.671145 TCAGCTGTCGGTGAGGAAT 58.329 52.632 14.67 0.00 42.30 3.01
774 817 1.166129 GTCTAGTCAGCTGTCGGTGA 58.834 55.000 14.67 6.56 44.73 4.02
776 819 0.882474 GTGTCTAGTCAGCTGTCGGT 59.118 55.000 14.67 0.00 0.00 4.69
778 821 0.794981 GCGTGTCTAGTCAGCTGTCG 60.795 60.000 14.67 7.98 0.00 4.35
779 822 0.523966 AGCGTGTCTAGTCAGCTGTC 59.476 55.000 14.67 8.44 36.73 3.51
780 823 0.962489 AAGCGTGTCTAGTCAGCTGT 59.038 50.000 14.67 0.00 38.28 4.40
781 824 1.336332 ACAAGCGTGTCTAGTCAGCTG 60.336 52.381 7.63 7.63 38.28 4.24
782 825 0.962489 ACAAGCGTGTCTAGTCAGCT 59.038 50.000 0.00 7.66 40.20 4.24
783 826 2.251893 GTACAAGCGTGTCTAGTCAGC 58.748 52.381 9.05 0.00 39.30 4.26
784 827 3.554259 TGTACAAGCGTGTCTAGTCAG 57.446 47.619 9.05 0.00 39.30 3.51
785 828 3.833442 CATGTACAAGCGTGTCTAGTCA 58.167 45.455 9.05 3.13 39.30 3.41
787 830 2.029380 TGCATGTACAAGCGTGTCTAGT 60.029 45.455 17.42 0.00 39.30 2.57
789 832 2.029380 AGTGCATGTACAAGCGTGTCTA 60.029 45.455 17.42 0.00 39.30 2.59
790 833 1.148310 GTGCATGTACAAGCGTGTCT 58.852 50.000 17.42 0.00 39.30 3.41
792 835 2.448926 TAGTGCATGTACAAGCGTGT 57.551 45.000 17.42 10.83 42.09 4.49
794 837 3.056821 TCTCTTAGTGCATGTACAAGCGT 60.057 43.478 17.42 10.22 0.00 5.07
798 841 4.380550 CGACCTCTCTTAGTGCATGTACAA 60.381 45.833 16.62 7.51 0.00 2.41
799 842 3.128764 CGACCTCTCTTAGTGCATGTACA 59.871 47.826 16.62 0.00 0.00 2.90
800 843 3.377485 TCGACCTCTCTTAGTGCATGTAC 59.623 47.826 5.71 5.71 0.00 2.90
802 845 2.164624 GTCGACCTCTCTTAGTGCATGT 59.835 50.000 3.51 0.00 0.00 3.21
806 849 0.456628 GGGTCGACCTCTCTTAGTGC 59.543 60.000 32.52 9.39 35.85 4.40
829 872 1.410004 TCTCGGCCGTTCAGGAATAT 58.590 50.000 27.15 0.00 45.00 1.28
937 988 4.724303 CAGTACTGACTACTGTTTCCTCG 58.276 47.826 18.45 0.00 45.30 4.63
948 999 3.082548 GTCTGGTGAGCAGTACTGACTA 58.917 50.000 27.08 12.45 32.33 2.59
958 1009 1.106944 TCAGTGTCGTCTGGTGAGCA 61.107 55.000 0.00 0.00 36.25 4.26
963 1014 0.388649 GCGATTCAGTGTCGTCTGGT 60.389 55.000 5.21 0.00 40.98 4.00
1082 1133 3.777910 GGAGAAGGCGGGCGGTTA 61.778 66.667 0.00 0.00 0.00 2.85
1194 1245 2.279408 GCGAGGGGGTAGAGGAGT 59.721 66.667 0.00 0.00 0.00 3.85
1196 1248 4.517934 CGGCGAGGGGGTAGAGGA 62.518 72.222 0.00 0.00 0.00 3.71
1344 1398 0.179073 CCCCGAAGCTCACTGGTATG 60.179 60.000 0.00 0.00 0.00 2.39
1464 1519 1.153168 ACAGACGGCTTGCAACAGT 60.153 52.632 0.00 0.00 0.00 3.55
1578 1633 1.225983 CCCATAACCCCGCACATCA 59.774 57.895 0.00 0.00 0.00 3.07
1641 1696 2.661840 TTTAGGCGCCACAACCACGA 62.662 55.000 31.54 3.53 0.00 4.35
1688 1743 4.995124 AGCAGAAACTATACACGACGAAT 58.005 39.130 0.00 0.00 0.00 3.34
1735 1790 4.275810 ACGTTAGCTCTAGGGAACACATA 58.724 43.478 0.00 0.00 0.00 2.29
1752 1807 6.017026 TCCTTTCACAATACAATGCAACGTTA 60.017 34.615 0.00 0.00 0.00 3.18
1765 1820 5.009631 CACTGACCCATTCCTTTCACAATA 58.990 41.667 0.00 0.00 0.00 1.90
1817 1872 6.406512 GGGGGTGTGGTAATGATTTGTTAATC 60.407 42.308 0.00 0.00 40.50 1.75
1841 1896 3.399330 ACTAACATGACCACGTTCAAGG 58.601 45.455 0.00 0.00 0.00 3.61
1848 1903 2.618053 GAGGGAACTAACATGACCACG 58.382 52.381 0.00 0.00 44.43 4.94
1867 1922 1.761711 TTACCAAATGGGGGACTGGA 58.238 50.000 4.17 0.00 42.91 3.86
1921 1976 4.032960 TCCCAGCACAGAACAATACAAT 57.967 40.909 0.00 0.00 0.00 2.71
1940 1995 7.404671 AACATACAAACCACAAAGGATATCC 57.595 36.000 14.41 14.41 41.22 2.59
2010 2066 9.409312 CTCAAGTGCAACATTTGTAATAATCAA 57.591 29.630 0.00 0.00 41.43 2.57
2123 2184 8.390354 TGCTCGAATGTTTGATACAGAAAATAG 58.610 33.333 0.00 0.00 40.83 1.73
2199 2419 5.048083 GCTATCAACTTGGGTGTGATTCAAA 60.048 40.000 0.00 0.00 0.00 2.69
2222 2442 1.807142 GCTTCACCTGGTTTCTACTGC 59.193 52.381 0.00 0.00 0.00 4.40
2231 2451 2.173569 ACTTCTCAAAGCTTCACCTGGT 59.826 45.455 0.00 0.00 35.81 4.00
2232 2452 2.856222 ACTTCTCAAAGCTTCACCTGG 58.144 47.619 0.00 0.00 35.81 4.45
2233 2453 7.856145 ATATAACTTCTCAAAGCTTCACCTG 57.144 36.000 0.00 0.00 35.81 4.00
2234 2454 8.103305 TCAATATAACTTCTCAAAGCTTCACCT 58.897 33.333 0.00 0.00 35.81 4.00
2235 2455 8.268850 TCAATATAACTTCTCAAAGCTTCACC 57.731 34.615 0.00 0.00 35.81 4.02
2236 2456 9.713740 CATCAATATAACTTCTCAAAGCTTCAC 57.286 33.333 0.00 0.00 35.81 3.18
2237 2457 9.453572 ACATCAATATAACTTCTCAAAGCTTCA 57.546 29.630 0.00 0.00 35.81 3.02
2296 2516 9.025041 CCTCAAGGACCTAAATAAAACAAGAAT 57.975 33.333 0.00 0.00 37.39 2.40
2321 2541 9.959749 TGTTCAATCTTTAGTTGTTAACATTCC 57.040 29.630 9.56 0.84 0.00 3.01
2382 2668 5.921962 TCATATGAGTTGCTCAGTGTACT 57.078 39.130 0.00 0.00 44.08 2.73
2532 2902 9.252962 CCATTATCTTTTCAGGTCATATTTTGC 57.747 33.333 0.00 0.00 0.00 3.68
2600 2971 3.561725 CCGATGTTTCTCTAATTCCCAGC 59.438 47.826 0.00 0.00 0.00 4.85
2730 3528 8.779354 AGAACTTAGAACTGCATAAGGTAAAG 57.221 34.615 9.10 1.23 34.05 1.85
2736 3534 8.333908 CAGCATAAGAACTTAGAACTGCATAAG 58.666 37.037 15.42 3.74 32.64 1.73
2909 3710 7.882056 TGATCAGCTATCTCAACCAGAGGGT 62.882 48.000 0.00 0.00 44.81 4.34
3047 3933 6.358974 TCAAAGAGATACACAGAATGGACA 57.641 37.500 0.00 0.00 43.62 4.02
3067 3953 7.856145 ACATAATGCAAAACAAAACCTTCAA 57.144 28.000 0.00 0.00 0.00 2.69
3194 4080 6.152831 ACTTCTAACAGTTGCCAAGAAAACTT 59.847 34.615 0.00 0.00 34.41 2.66
3207 4093 5.615289 AGTGATTGCAGACTTCTAACAGTT 58.385 37.500 0.00 0.00 0.00 3.16
3230 4116 6.713276 TGGAAATAAGATTAAACCCGACAGA 58.287 36.000 0.00 0.00 0.00 3.41
3235 4121 8.446599 ACTGTATGGAAATAAGATTAAACCCG 57.553 34.615 0.00 0.00 0.00 5.28
3265 4151 6.372659 CAGAGTGCCAAATACTAAATGACAGT 59.627 38.462 0.00 0.00 0.00 3.55
3283 4169 5.869344 TGCGGATATATACATTTCAGAGTGC 59.131 40.000 0.00 0.00 0.00 4.40
3305 4191 4.873827 TGTGGAAATAAGATAACCGTCTGC 59.126 41.667 0.00 0.00 0.00 4.26
3306 4192 6.106673 ACTGTGGAAATAAGATAACCGTCTG 58.893 40.000 0.00 0.00 0.00 3.51
3307 4193 6.295719 ACTGTGGAAATAAGATAACCGTCT 57.704 37.500 0.00 0.00 0.00 4.18
3308 4194 6.478016 GGTACTGTGGAAATAAGATAACCGTC 59.522 42.308 0.00 0.00 0.00 4.79
3310 4196 5.461078 CGGTACTGTGGAAATAAGATAACCG 59.539 44.000 0.00 0.00 38.98 4.44
3311 4197 6.576185 TCGGTACTGTGGAAATAAGATAACC 58.424 40.000 0.64 0.00 0.00 2.85
3312 4198 7.763071 AGTTCGGTACTGTGGAAATAAGATAAC 59.237 37.037 0.64 0.00 35.19 1.89
3313 4199 7.844009 AGTTCGGTACTGTGGAAATAAGATAA 58.156 34.615 0.64 0.00 35.19 1.75
3314 4200 7.414222 AGTTCGGTACTGTGGAAATAAGATA 57.586 36.000 0.64 0.00 35.19 1.98
3315 4201 6.295719 AGTTCGGTACTGTGGAAATAAGAT 57.704 37.500 0.64 0.00 35.19 2.40
3316 4202 5.733620 AGTTCGGTACTGTGGAAATAAGA 57.266 39.130 0.64 0.00 35.19 2.10
3317 4203 6.628185 AGTAGTTCGGTACTGTGGAAATAAG 58.372 40.000 0.64 0.00 37.73 1.73
3318 4204 6.350445 GGAGTAGTTCGGTACTGTGGAAATAA 60.350 42.308 0.64 0.00 37.73 1.40
3319 4205 5.126061 GGAGTAGTTCGGTACTGTGGAAATA 59.874 44.000 0.64 0.00 37.73 1.40
3320 4206 4.081807 GGAGTAGTTCGGTACTGTGGAAAT 60.082 45.833 0.64 0.00 37.73 2.17
3321 4207 3.256631 GGAGTAGTTCGGTACTGTGGAAA 59.743 47.826 0.64 0.00 37.73 3.13
3322 4208 2.821969 GGAGTAGTTCGGTACTGTGGAA 59.178 50.000 0.64 0.00 37.73 3.53
3323 4209 2.440409 GGAGTAGTTCGGTACTGTGGA 58.560 52.381 0.64 0.00 37.73 4.02
3329 4215 1.020437 CGGAGGGAGTAGTTCGGTAC 58.980 60.000 0.00 0.00 0.00 3.34
3356 4242 7.597743 CCATTACGTACTCTAACATTGGGATAC 59.402 40.741 0.00 0.00 0.00 2.24
3360 4246 5.054477 CCCATTACGTACTCTAACATTGGG 58.946 45.833 0.00 0.00 34.59 4.12
3361 4247 4.510340 GCCCATTACGTACTCTAACATTGG 59.490 45.833 0.00 0.00 0.00 3.16
3362 4248 4.510340 GGCCCATTACGTACTCTAACATTG 59.490 45.833 0.00 0.00 0.00 2.82
3364 4250 3.965347 AGGCCCATTACGTACTCTAACAT 59.035 43.478 0.00 0.00 0.00 2.71
3405 4405 5.791666 CGACCCTTATCTCTAATTAACCCC 58.208 45.833 0.00 0.00 0.00 4.95
3586 4586 0.902984 TGGCGTTGCTAGAAGGAGGA 60.903 55.000 0.00 0.00 0.00 3.71
3600 4600 0.323360 AGCATTGGGTGTTATGGCGT 60.323 50.000 0.00 0.00 0.00 5.68
3633 4633 9.191479 TGATTCCTAGGTTTCTAAAAACACAAA 57.809 29.630 9.08 0.00 45.44 2.83
3672 4672 3.677156 AGAATTTTGGGATGGAGGGAG 57.323 47.619 0.00 0.00 0.00 4.30
3674 4674 3.444029 ACAAGAATTTTGGGATGGAGGG 58.556 45.455 5.68 0.00 0.00 4.30
3676 4676 5.990120 AAGACAAGAATTTTGGGATGGAG 57.010 39.130 5.68 0.00 0.00 3.86
3677 4677 6.789268 TCTAAGACAAGAATTTTGGGATGGA 58.211 36.000 5.68 0.00 0.00 3.41
3678 4678 7.651027 ATCTAAGACAAGAATTTTGGGATGG 57.349 36.000 5.68 0.00 0.00 3.51
3679 4679 9.362539 CAAATCTAAGACAAGAATTTTGGGATG 57.637 33.333 5.68 0.00 28.49 3.51
3680 4680 9.093458 ACAAATCTAAGACAAGAATTTTGGGAT 57.907 29.630 0.00 0.00 33.04 3.85
3681 4681 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
3682 4682 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
3690 4690 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
3691 4691 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
3692 4692 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
3693 4693 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
3694 4694 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
3695 4695 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
3696 4696 9.828852 GTACATCCGTATCTAGACAAATCTAAG 57.171 37.037 0.00 0.00 36.98 2.18
3697 4697 8.790718 GGTACATCCGTATCTAGACAAATCTAA 58.209 37.037 0.00 0.00 36.98 2.10
3698 4698 8.162085 AGGTACATCCGTATCTAGACAAATCTA 58.838 37.037 0.00 0.00 37.29 1.98
3699 4699 7.005296 AGGTACATCCGTATCTAGACAAATCT 58.995 38.462 0.00 0.00 37.29 2.40
3700 4700 7.216973 AGGTACATCCGTATCTAGACAAATC 57.783 40.000 0.00 0.00 37.29 2.17
3701 4701 8.701908 TTAGGTACATCCGTATCTAGACAAAT 57.298 34.615 0.00 0.00 41.33 2.32
3702 4702 8.701908 ATTAGGTACATCCGTATCTAGACAAA 57.298 34.615 0.00 0.00 41.33 2.83
3703 4703 9.224267 GTATTAGGTACATCCGTATCTAGACAA 57.776 37.037 0.00 0.00 41.33 3.18
3704 4704 8.600668 AGTATTAGGTACATCCGTATCTAGACA 58.399 37.037 0.00 0.00 41.33 3.41
3713 4713 8.752187 TCAAGTTTTAGTATTAGGTACATCCGT 58.248 33.333 0.00 0.00 41.99 4.69
3714 4714 9.028185 GTCAAGTTTTAGTATTAGGTACATCCG 57.972 37.037 0.00 0.00 41.99 4.18
3726 4726 9.314321 CGGATGTATCAAGTCAAGTTTTAGTAT 57.686 33.333 0.00 0.00 0.00 2.12
3727 4727 8.308931 ACGGATGTATCAAGTCAAGTTTTAGTA 58.691 33.333 0.00 0.00 0.00 1.82
3728 4728 7.159372 ACGGATGTATCAAGTCAAGTTTTAGT 58.841 34.615 0.00 0.00 0.00 2.24
3729 4729 7.596749 ACGGATGTATCAAGTCAAGTTTTAG 57.403 36.000 0.00 0.00 0.00 1.85
3730 4730 9.661563 AATACGGATGTATCAAGTCAAGTTTTA 57.338 29.630 0.00 0.00 40.42 1.52
3731 4731 8.561738 AATACGGATGTATCAAGTCAAGTTTT 57.438 30.769 0.00 0.00 40.42 2.43
3732 4732 8.561738 AAATACGGATGTATCAAGTCAAGTTT 57.438 30.769 0.00 0.00 40.42 2.66
3733 4733 9.314321 CTAAATACGGATGTATCAAGTCAAGTT 57.686 33.333 0.00 0.00 40.42 2.66
3734 4734 8.692710 TCTAAATACGGATGTATCAAGTCAAGT 58.307 33.333 0.00 0.00 40.42 3.16
3735 4735 8.969267 GTCTAAATACGGATGTATCAAGTCAAG 58.031 37.037 0.00 0.00 40.42 3.02
3736 4736 8.471609 TGTCTAAATACGGATGTATCAAGTCAA 58.528 33.333 0.00 0.00 40.42 3.18
3737 4737 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
3738 4738 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
3739 4739 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
3746 4746 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
3747 4747 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
3749 4749 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
3750 4750 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
3758 4758 9.354673 TCCAAAATTCTTGTCTTAGATTTGTCT 57.645 29.630 0.00 0.00 28.79 3.41
3759 4759 9.965824 TTCCAAAATTCTTGTCTTAGATTTGTC 57.034 29.630 0.00 0.00 28.79 3.18
3760 4760 9.750125 GTTCCAAAATTCTTGTCTTAGATTTGT 57.250 29.630 0.00 0.00 28.79 2.83
3761 4761 8.905702 CGTTCCAAAATTCTTGTCTTAGATTTG 58.094 33.333 0.00 0.00 29.84 2.32
3762 4762 8.082242 CCGTTCCAAAATTCTTGTCTTAGATTT 58.918 33.333 0.00 0.00 0.00 2.17
3763 4763 7.447238 TCCGTTCCAAAATTCTTGTCTTAGATT 59.553 33.333 0.00 0.00 0.00 2.40
3764 4764 6.940298 TCCGTTCCAAAATTCTTGTCTTAGAT 59.060 34.615 0.00 0.00 0.00 1.98
3765 4765 6.292923 TCCGTTCCAAAATTCTTGTCTTAGA 58.707 36.000 0.00 0.00 0.00 2.10
3766 4766 6.348540 CCTCCGTTCCAAAATTCTTGTCTTAG 60.349 42.308 0.00 0.00 0.00 2.18
3767 4767 5.472137 CCTCCGTTCCAAAATTCTTGTCTTA 59.528 40.000 0.00 0.00 0.00 2.10
3768 4768 4.278419 CCTCCGTTCCAAAATTCTTGTCTT 59.722 41.667 0.00 0.00 0.00 3.01
3769 4769 3.821033 CCTCCGTTCCAAAATTCTTGTCT 59.179 43.478 0.00 0.00 0.00 3.41
3770 4770 3.057526 CCCTCCGTTCCAAAATTCTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
3771 4771 2.890945 CCCTCCGTTCCAAAATTCTTGT 59.109 45.455 0.00 0.00 0.00 3.16
3772 4772 3.153919 TCCCTCCGTTCCAAAATTCTTG 58.846 45.455 0.00 0.00 0.00 3.02
3773 4773 3.181433 ACTCCCTCCGTTCCAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
3774 4774 2.375509 ACTCCCTCCGTTCCAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
3775 4775 2.791655 ACTCCCTCCGTTCCAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
3776 4776 2.971901 ACTCCCTCCGTTCCAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
3777 4777 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
3778 4778 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
3779 4779 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
3780 4780 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
3781 4781 0.115745 AAGGTACTCCCTCCGTTCCA 59.884 55.000 0.00 0.00 45.47 3.53
3782 4782 2.030371 CTAAGGTACTCCCTCCGTTCC 58.970 57.143 0.00 0.00 45.47 3.62
3783 4783 2.687425 GTCTAAGGTACTCCCTCCGTTC 59.313 54.545 0.00 0.00 45.47 3.95
3784 4784 2.732763 GTCTAAGGTACTCCCTCCGTT 58.267 52.381 0.00 0.00 45.47 4.44
3785 4785 1.407989 CGTCTAAGGTACTCCCTCCGT 60.408 57.143 0.00 0.00 45.47 4.69
3786 4786 1.307097 CGTCTAAGGTACTCCCTCCG 58.693 60.000 0.00 0.00 45.47 4.63
3787 4787 1.031235 GCGTCTAAGGTACTCCCTCC 58.969 60.000 0.00 0.00 45.47 4.30
3788 4788 1.404748 GTGCGTCTAAGGTACTCCCTC 59.595 57.143 0.00 0.00 45.47 4.30
3790 4790 0.459078 GGTGCGTCTAAGGTACTCCC 59.541 60.000 0.00 0.00 38.49 4.30
3791 4791 1.404748 GAGGTGCGTCTAAGGTACTCC 59.595 57.143 0.00 0.00 38.49 3.85
3792 4792 2.089980 TGAGGTGCGTCTAAGGTACTC 58.910 52.381 0.00 0.00 38.49 2.59
3793 4793 3.876550 TGATGAGGTGCGTCTAAGGTACT 60.877 47.826 0.00 0.00 34.64 2.73
3794 4794 2.426024 TGATGAGGTGCGTCTAAGGTAC 59.574 50.000 0.00 0.00 33.53 3.34
3795 4795 2.730382 TGATGAGGTGCGTCTAAGGTA 58.270 47.619 0.00 0.00 33.53 3.08
3796 4796 1.557099 TGATGAGGTGCGTCTAAGGT 58.443 50.000 0.00 0.00 33.53 3.50
3852 4852 2.374170 ACGGGTATCACTGGGAAAAAGT 59.626 45.455 0.00 0.00 0.00 2.66
3929 4929 2.126424 GTCTGACAGACCGCCGAC 60.126 66.667 22.77 0.00 39.28 4.79
3970 4970 3.951037 AGCAGTCGAGTTCTACTCATGAT 59.049 43.478 0.00 0.00 45.30 2.45
3982 4982 1.373999 GCAGCAAGAGCAGTCGAGT 60.374 57.895 0.00 0.00 45.49 4.18
3985 4985 2.047465 AGGCAGCAAGAGCAGTCG 60.047 61.111 0.00 0.00 45.49 4.18
4010 5010 1.377725 AACCTGAGGGATGCGCTTG 60.378 57.895 9.73 0.00 36.25 4.01
4051 5052 2.525105 TATTCCCCAAAGGTCAAGCC 57.475 50.000 0.00 0.00 36.75 4.35
4087 5088 2.098614 TGCCAACACAGAACACACAAT 58.901 42.857 0.00 0.00 0.00 2.71
4144 5147 0.667993 AACCACCACATTCAGCAACG 59.332 50.000 0.00 0.00 0.00 4.10
4156 5159 0.831966 ACGAACCACAGTAACCACCA 59.168 50.000 0.00 0.00 0.00 4.17
4181 5184 2.287788 GGAGTTTGCAGTCACCACATTG 60.288 50.000 0.00 0.00 0.00 2.82
4187 5190 0.398318 AGAGGGAGTTTGCAGTCACC 59.602 55.000 0.00 0.00 0.00 4.02
4192 5195 1.202806 TCACCAAGAGGGAGTTTGCAG 60.203 52.381 0.00 0.00 41.15 4.41
4256 5259 1.729149 GCCACGCGAAAGGAAATGAAG 60.729 52.381 15.93 0.00 0.00 3.02
4264 5267 0.104304 ATACCTAGCCACGCGAAAGG 59.896 55.000 15.93 13.17 35.22 3.11
4282 5288 4.392921 AATCAAGTCTCGGTCGATTGAT 57.607 40.909 12.21 12.21 41.18 2.57
4300 5306 4.873827 TGTTATGTCGCTTGGGACTTAATC 59.126 41.667 20.34 16.09 38.22 1.75
4302 5308 4.274602 TGTTATGTCGCTTGGGACTTAA 57.725 40.909 16.63 16.49 37.81 1.85
4303 5309 3.965379 TGTTATGTCGCTTGGGACTTA 57.035 42.857 16.63 12.43 37.81 2.24
4309 5315 4.155826 TCTTTTCCATGTTATGTCGCTTGG 59.844 41.667 0.00 0.00 0.00 3.61
4314 5324 9.796062 CAAAATTTTCTTTTCCATGTTATGTCG 57.204 29.630 0.00 0.00 0.00 4.35
4325 5335 5.922739 ATCCGTGCAAAATTTTCTTTTCC 57.077 34.783 0.00 0.00 0.00 3.13
4326 5336 9.877137 ATTTTATCCGTGCAAAATTTTCTTTTC 57.123 25.926 0.00 0.00 31.88 2.29
4331 5341 7.739911 GTGTGATTTTATCCGTGCAAAATTTTC 59.260 33.333 0.00 0.00 35.14 2.29
4333 5343 6.928492 AGTGTGATTTTATCCGTGCAAAATTT 59.072 30.769 0.00 0.00 35.14 1.82
4338 5348 6.751514 ATTAGTGTGATTTTATCCGTGCAA 57.248 33.333 0.00 0.00 0.00 4.08
4339 5349 9.549078 TTATATTAGTGTGATTTTATCCGTGCA 57.451 29.630 0.00 0.00 0.00 4.57
4354 5364 8.777578 TGTCCTAGTCCATGTTATATTAGTGT 57.222 34.615 0.00 0.00 0.00 3.55
4372 5382 3.834489 ATCAGACTTGGCATGTCCTAG 57.166 47.619 24.81 16.94 42.42 3.02
4374 5384 3.446442 AAATCAGACTTGGCATGTCCT 57.554 42.857 24.81 12.79 35.21 3.85
4375 5385 3.065925 GCTAAATCAGACTTGGCATGTCC 59.934 47.826 24.81 11.04 35.21 4.02
4381 5391 4.022849 ACAACTTGCTAAATCAGACTTGGC 60.023 41.667 0.00 0.00 0.00 4.52
4458 8559 3.507924 GGCGCGCCATGTCAATCA 61.508 61.111 43.55 0.00 35.81 2.57
4478 8731 2.001812 CTTCCACGTGTCTGATGGAG 57.998 55.000 15.65 0.00 43.32 3.86
4491 8744 1.227002 GATCCCTCGACGCTTCCAC 60.227 63.158 0.00 0.00 0.00 4.02
4493 8746 1.066587 CAGATCCCTCGACGCTTCC 59.933 63.158 0.00 0.00 0.00 3.46
4517 8801 2.261671 GCTTCTCTTCCGTGGCGA 59.738 61.111 0.00 0.00 0.00 5.54
4522 8806 1.081376 CGTCACGCTTCTCTTCCGT 60.081 57.895 0.00 0.00 35.29 4.69
4572 8861 0.241213 CGACTCATGTCCGACACAGT 59.759 55.000 12.78 12.78 38.85 3.55
4573 8862 0.456824 CCGACTCATGTCCGACACAG 60.457 60.000 2.57 5.62 38.85 3.66
4574 8863 1.584495 CCGACTCATGTCCGACACA 59.416 57.895 2.57 0.00 39.94 3.72
4599 8888 2.166664 GTGTGCTCCTACCAACCTCTAG 59.833 54.545 0.00 0.00 0.00 2.43
4604 8893 1.375523 CGGTGTGCTCCTACCAACC 60.376 63.158 0.00 0.00 36.76 3.77
4767 9192 1.734465 CTGGTGCCTCGAAAATCAGTC 59.266 52.381 0.00 0.00 0.00 3.51
4803 9228 7.507733 AAGGTTATTCGACGTAGATATGACT 57.492 36.000 0.00 0.00 0.00 3.41
4811 9236 4.966366 CGAGGTAAAGGTTATTCGACGTAG 59.034 45.833 0.00 0.00 0.00 3.51
4813 9238 3.428045 CCGAGGTAAAGGTTATTCGACGT 60.428 47.826 0.00 0.00 0.00 4.34
4814 9239 3.111098 CCGAGGTAAAGGTTATTCGACG 58.889 50.000 0.00 0.00 0.00 5.12
4815 9240 4.357996 CTCCGAGGTAAAGGTTATTCGAC 58.642 47.826 0.00 0.00 0.00 4.20
4816 9241 3.181483 GCTCCGAGGTAAAGGTTATTCGA 60.181 47.826 0.00 0.00 0.00 3.71
4817 9242 3.121544 GCTCCGAGGTAAAGGTTATTCG 58.878 50.000 0.00 0.00 0.00 3.34
4818 9243 4.120589 CTGCTCCGAGGTAAAGGTTATTC 58.879 47.826 0.00 0.00 0.00 1.75
4819 9244 3.118371 CCTGCTCCGAGGTAAAGGTTATT 60.118 47.826 0.00 0.00 0.00 1.40
4821 9246 1.829222 CCTGCTCCGAGGTAAAGGTTA 59.171 52.381 0.00 0.00 0.00 2.85
4823 9248 1.265454 CCCTGCTCCGAGGTAAAGGT 61.265 60.000 0.00 0.00 0.00 3.50
4824 9249 1.522569 CCCTGCTCCGAGGTAAAGG 59.477 63.158 0.00 0.00 0.00 3.11
4825 9250 1.153349 GCCCTGCTCCGAGGTAAAG 60.153 63.158 0.00 0.00 0.00 1.85
4826 9251 1.899437 CTGCCCTGCTCCGAGGTAAA 61.899 60.000 0.00 0.00 0.00 2.01
4829 9255 4.704103 TCTGCCCTGCTCCGAGGT 62.704 66.667 0.00 0.00 0.00 3.85
4841 9267 0.889306 AGGTACGTCAACTCTCTGCC 59.111 55.000 0.00 0.00 0.00 4.85
4869 9295 0.679640 TTGATGGATTGACCCCGTGC 60.680 55.000 0.00 0.00 38.00 5.34
4883 9309 2.225727 CGTCCATCATCCATGCTTGATG 59.774 50.000 20.78 20.78 45.66 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.