Multiple sequence alignment - TraesCS1B01G094400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G094400 chr1B 100.000 2333 0 0 601 2933 96313653 96315985 0.000000e+00 4309.0
1 TraesCS1B01G094400 chr1B 100.000 185 0 0 1 185 96313053 96313237 2.800000e-90 342.0
2 TraesCS1B01G094400 chr1B 84.286 140 20 2 2374 2512 664293974 664294112 5.100000e-28 135.0
3 TraesCS1B01G094400 chr1B 95.918 49 2 0 2735 2783 640481154 640481106 2.420000e-11 80.5
4 TraesCS1B01G094400 chr1B 97.674 43 1 0 1929 1971 96314938 96314980 1.130000e-09 75.0
5 TraesCS1B01G094400 chr1B 97.674 43 1 0 1886 1928 96314981 96315023 1.130000e-09 75.0
6 TraesCS1B01G094400 chr1A 93.776 980 46 8 796 1762 58859989 58860966 0.000000e+00 1458.0
7 TraesCS1B01G094400 chr1A 89.941 338 33 1 2401 2737 58897874 58898211 4.490000e-118 435.0
8 TraesCS1B01G094400 chr1A 73.904 456 93 18 1932 2374 145382673 145382231 3.030000e-35 159.0
9 TraesCS1B01G094400 chr1A 95.714 70 2 1 733 801 58859787 58859856 8.590000e-21 111.0
10 TraesCS1B01G094400 chr1D 95.191 811 29 3 863 1672 60185667 60186468 0.000000e+00 1273.0
11 TraesCS1B01G094400 chr1D 87.886 809 66 8 1886 2664 60186672 60187478 0.000000e+00 922.0
12 TraesCS1B01G094400 chr1D 98.204 167 3 0 1805 1971 60186505 60186671 2.860000e-75 292.0
13 TraesCS1B01G094400 chr1D 76.225 408 79 11 1978 2374 143948626 143949026 1.780000e-47 200.0
14 TraesCS1B01G094400 chr1D 98.837 86 1 0 1886 1971 60186629 60186714 1.410000e-33 154.0
15 TraesCS1B01G094400 chr1D 89.623 106 11 0 617 722 60185146 60185251 5.100000e-28 135.0
16 TraesCS1B01G094400 chr1D 100.000 43 0 0 1929 1971 60186586 60186628 2.420000e-11 80.5
17 TraesCS1B01G094400 chr1D 97.674 43 0 1 857 898 60185622 60185664 4.050000e-09 73.1
18 TraesCS1B01G094400 chr2B 86.323 892 72 30 827 1675 62418555 62417671 0.000000e+00 926.0
19 TraesCS1B01G094400 chr2B 86.822 129 14 2 2384 2512 690685476 690685351 1.100000e-29 141.0
20 TraesCS1B01G094400 chr2B 77.143 105 22 2 1983 2086 103475304 103475201 3.160000e-05 60.2
21 TraesCS1B01G094400 chr2A 81.527 969 107 40 827 1762 3755393 3754464 0.000000e+00 732.0
22 TraesCS1B01G094400 chr2D 86.667 660 42 25 856 1473 5174379 5175034 0.000000e+00 689.0
23 TraesCS1B01G094400 chr2D 76.759 469 77 15 2075 2511 358650238 358649770 1.760000e-57 233.0
24 TraesCS1B01G094400 chr6B 78.744 414 56 14 2122 2505 508933394 508933805 6.280000e-62 248.0
25 TraesCS1B01G094400 chr5A 81.169 308 49 7 2072 2374 620852911 620852608 3.780000e-59 239.0
26 TraesCS1B01G094400 chrUn 92.357 157 12 0 2777 2933 99191972 99192128 1.060000e-54 224.0
27 TraesCS1B01G094400 chr3D 80.065 306 54 5 2075 2374 71755907 71755603 1.370000e-53 220.0
28 TraesCS1B01G094400 chr3A 80.812 271 45 6 2100 2363 83957549 83957279 3.830000e-49 206.0
29 TraesCS1B01G094400 chr3A 78.689 305 58 7 2075 2374 149074163 149073861 2.310000e-46 196.0
30 TraesCS1B01G094400 chr5B 75.980 408 75 18 1977 2374 406887862 406888256 3.860000e-44 189.0
31 TraesCS1B01G094400 chr7D 85.926 135 19 0 2374 2508 521889448 521889582 8.470000e-31 145.0
32 TraesCS1B01G094400 chr7D 89.796 49 5 0 1524 1572 334882377 334882425 2.440000e-06 63.9
33 TraesCS1B01G094400 chr7A 88.430 121 13 1 2392 2512 271344204 271344085 8.470000e-31 145.0
34 TraesCS1B01G094400 chr7A 73.645 406 90 15 1980 2376 173407666 173408063 1.100000e-29 141.0
35 TraesCS1B01G094400 chr7A 84.892 139 20 1 2374 2512 272239054 272239191 3.940000e-29 139.0
36 TraesCS1B01G094400 chr7B 86.154 65 7 2 1521 1583 624544531 624544595 5.250000e-08 69.4
37 TraesCS1B01G094400 chr5D 84.615 65 8 2 1527 1589 383006508 383006572 2.440000e-06 63.9
38 TraesCS1B01G094400 chr6A 83.077 65 9 2 1527 1589 463803271 463803335 1.140000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G094400 chr1B 96313053 96315985 2932 False 1200.250000 4309 98.837 1 2933 4 chr1B.!!$F2 2932
1 TraesCS1B01G094400 chr1A 58859787 58860966 1179 False 784.500000 1458 94.745 733 1762 2 chr1A.!!$F2 1029
2 TraesCS1B01G094400 chr1D 60185146 60187478 2332 False 418.514286 1273 95.345 617 2664 7 chr1D.!!$F2 2047
3 TraesCS1B01G094400 chr2B 62417671 62418555 884 True 926.000000 926 86.323 827 1675 1 chr2B.!!$R1 848
4 TraesCS1B01G094400 chr2A 3754464 3755393 929 True 732.000000 732 81.527 827 1762 1 chr2A.!!$R1 935
5 TraesCS1B01G094400 chr2D 5174379 5175034 655 False 689.000000 689 86.667 856 1473 1 chr2D.!!$F1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
699 700 0.102481 CTTACGGTCCCACTCATCGG 59.898 60.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2621 3088 0.031585 GCATATACCAGTCGCGGTCA 59.968 55.0 6.13 0.0 40.67 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.086054 AACATGTGTTCCTCTCTCGC 57.914 50.000 0.00 0.00 31.64 5.03
27 28 0.247736 ACATGTGTTCCTCTCTCGCC 59.752 55.000 0.00 0.00 0.00 5.54
28 29 0.803768 CATGTGTTCCTCTCTCGCCG 60.804 60.000 0.00 0.00 0.00 6.46
29 30 0.965866 ATGTGTTCCTCTCTCGCCGA 60.966 55.000 0.00 0.00 0.00 5.54
30 31 1.153997 GTGTTCCTCTCTCGCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
31 32 2.341101 TGTTCCTCTCTCGCCGACC 61.341 63.158 0.00 0.00 0.00 4.79
32 33 2.035155 TTCCTCTCTCGCCGACCA 59.965 61.111 0.00 0.00 0.00 4.02
33 34 2.341101 TTCCTCTCTCGCCGACCAC 61.341 63.158 0.00 0.00 0.00 4.16
34 35 2.752238 CCTCTCTCGCCGACCACT 60.752 66.667 0.00 0.00 0.00 4.00
35 36 2.487428 CTCTCTCGCCGACCACTG 59.513 66.667 0.00 0.00 0.00 3.66
36 37 2.033602 TCTCTCGCCGACCACTGA 59.966 61.111 0.00 0.00 0.00 3.41
37 38 1.987704 CTCTCTCGCCGACCACTGAG 61.988 65.000 0.00 0.00 0.00 3.35
38 39 3.691744 CTCTCGCCGACCACTGAGC 62.692 68.421 0.00 0.00 0.00 4.26
39 40 4.803426 CTCGCCGACCACTGAGCC 62.803 72.222 0.00 0.00 0.00 4.70
41 42 4.680237 CGCCGACCACTGAGCCAA 62.680 66.667 0.00 0.00 0.00 4.52
42 43 2.281484 GCCGACCACTGAGCCAAA 60.281 61.111 0.00 0.00 0.00 3.28
43 44 1.896660 GCCGACCACTGAGCCAAAA 60.897 57.895 0.00 0.00 0.00 2.44
44 45 1.949257 CCGACCACTGAGCCAAAAC 59.051 57.895 0.00 0.00 0.00 2.43
45 46 1.515521 CCGACCACTGAGCCAAAACC 61.516 60.000 0.00 0.00 0.00 3.27
46 47 1.841663 CGACCACTGAGCCAAAACCG 61.842 60.000 0.00 0.00 0.00 4.44
47 48 0.534203 GACCACTGAGCCAAAACCGA 60.534 55.000 0.00 0.00 0.00 4.69
48 49 0.106918 ACCACTGAGCCAAAACCGAA 60.107 50.000 0.00 0.00 0.00 4.30
49 50 1.028905 CCACTGAGCCAAAACCGAAA 58.971 50.000 0.00 0.00 0.00 3.46
50 51 1.407258 CCACTGAGCCAAAACCGAAAA 59.593 47.619 0.00 0.00 0.00 2.29
51 52 2.159170 CCACTGAGCCAAAACCGAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
74 75 6.934048 AAGAAGAATATAACCAGAAGCAGC 57.066 37.500 0.00 0.00 0.00 5.25
75 76 5.994250 AGAAGAATATAACCAGAAGCAGCA 58.006 37.500 0.00 0.00 0.00 4.41
76 77 6.418101 AGAAGAATATAACCAGAAGCAGCAA 58.582 36.000 0.00 0.00 0.00 3.91
77 78 6.317391 AGAAGAATATAACCAGAAGCAGCAAC 59.683 38.462 0.00 0.00 0.00 4.17
78 79 4.572389 AGAATATAACCAGAAGCAGCAACG 59.428 41.667 0.00 0.00 0.00 4.10
79 80 2.472695 ATAACCAGAAGCAGCAACGA 57.527 45.000 0.00 0.00 0.00 3.85
80 81 2.248280 TAACCAGAAGCAGCAACGAA 57.752 45.000 0.00 0.00 0.00 3.85
81 82 0.947244 AACCAGAAGCAGCAACGAAG 59.053 50.000 0.00 0.00 0.00 3.79
82 83 0.106708 ACCAGAAGCAGCAACGAAGA 59.893 50.000 0.00 0.00 0.00 2.87
83 84 0.514691 CCAGAAGCAGCAACGAAGAC 59.485 55.000 0.00 0.00 0.00 3.01
84 85 0.514691 CAGAAGCAGCAACGAAGACC 59.485 55.000 0.00 0.00 0.00 3.85
85 86 0.394565 AGAAGCAGCAACGAAGACCT 59.605 50.000 0.00 0.00 0.00 3.85
86 87 1.202698 AGAAGCAGCAACGAAGACCTT 60.203 47.619 0.00 0.00 0.00 3.50
87 88 0.947244 AAGCAGCAACGAAGACCTTG 59.053 50.000 0.00 0.00 0.00 3.61
88 89 1.081840 GCAGCAACGAAGACCTTGC 60.082 57.895 0.00 0.00 42.67 4.01
89 90 1.205064 CAGCAACGAAGACCTTGCG 59.795 57.895 0.00 0.00 46.16 4.85
90 91 1.069090 AGCAACGAAGACCTTGCGA 59.931 52.632 0.00 0.00 46.16 5.10
91 92 0.531974 AGCAACGAAGACCTTGCGAA 60.532 50.000 0.00 0.00 46.16 4.70
92 93 0.110644 GCAACGAAGACCTTGCGAAG 60.111 55.000 0.00 0.00 33.89 3.79
93 94 1.497991 CAACGAAGACCTTGCGAAGA 58.502 50.000 0.00 0.00 0.00 2.87
94 95 1.192534 CAACGAAGACCTTGCGAAGAC 59.807 52.381 0.00 0.00 0.00 3.01
95 96 0.387929 ACGAAGACCTTGCGAAGACA 59.612 50.000 0.00 0.00 0.00 3.41
96 97 1.202486 ACGAAGACCTTGCGAAGACAA 60.202 47.619 0.00 0.00 0.00 3.18
97 98 2.069273 CGAAGACCTTGCGAAGACAAT 58.931 47.619 0.00 0.00 0.00 2.71
98 99 2.159787 CGAAGACCTTGCGAAGACAATG 60.160 50.000 0.00 0.00 0.00 2.82
99 100 1.813513 AGACCTTGCGAAGACAATGG 58.186 50.000 0.00 0.00 0.00 3.16
100 101 0.169009 GACCTTGCGAAGACAATGGC 59.831 55.000 0.00 0.00 0.00 4.40
101 102 1.244019 ACCTTGCGAAGACAATGGCC 61.244 55.000 0.00 0.00 0.00 5.36
102 103 1.243342 CCTTGCGAAGACAATGGCCA 61.243 55.000 8.56 8.56 0.00 5.36
103 104 0.597568 CTTGCGAAGACAATGGCCAA 59.402 50.000 10.96 0.00 0.00 4.52
104 105 1.000385 CTTGCGAAGACAATGGCCAAA 60.000 47.619 10.96 0.00 0.00 3.28
105 106 1.035923 TGCGAAGACAATGGCCAAAA 58.964 45.000 10.96 0.00 0.00 2.44
106 107 1.410517 TGCGAAGACAATGGCCAAAAA 59.589 42.857 10.96 0.00 0.00 1.94
107 108 1.792367 GCGAAGACAATGGCCAAAAAC 59.208 47.619 10.96 1.93 0.00 2.43
108 109 2.801342 GCGAAGACAATGGCCAAAAACA 60.801 45.455 10.96 0.00 0.00 2.83
109 110 3.452474 CGAAGACAATGGCCAAAAACAA 58.548 40.909 10.96 0.00 0.00 2.83
110 111 3.868077 CGAAGACAATGGCCAAAAACAAA 59.132 39.130 10.96 0.00 0.00 2.83
111 112 4.260172 CGAAGACAATGGCCAAAAACAAAC 60.260 41.667 10.96 0.00 0.00 2.93
112 113 4.213564 AGACAATGGCCAAAAACAAACA 57.786 36.364 10.96 0.00 0.00 2.83
113 114 4.190772 AGACAATGGCCAAAAACAAACAG 58.809 39.130 10.96 0.00 0.00 3.16
114 115 2.682352 ACAATGGCCAAAAACAAACAGC 59.318 40.909 10.96 0.00 0.00 4.40
115 116 2.681848 CAATGGCCAAAAACAAACAGCA 59.318 40.909 10.96 0.00 0.00 4.41
116 117 2.021355 TGGCCAAAAACAAACAGCAG 57.979 45.000 0.61 0.00 0.00 4.24
117 118 1.552337 TGGCCAAAAACAAACAGCAGA 59.448 42.857 0.61 0.00 0.00 4.26
118 119 2.170187 TGGCCAAAAACAAACAGCAGAT 59.830 40.909 0.61 0.00 0.00 2.90
119 120 2.802247 GGCCAAAAACAAACAGCAGATC 59.198 45.455 0.00 0.00 0.00 2.75
120 121 2.802247 GCCAAAAACAAACAGCAGATCC 59.198 45.455 0.00 0.00 0.00 3.36
121 122 3.392882 CCAAAAACAAACAGCAGATCCC 58.607 45.455 0.00 0.00 0.00 3.85
122 123 3.392882 CAAAAACAAACAGCAGATCCCC 58.607 45.455 0.00 0.00 0.00 4.81
123 124 2.683211 AAACAAACAGCAGATCCCCT 57.317 45.000 0.00 0.00 0.00 4.79
124 125 2.206576 AACAAACAGCAGATCCCCTC 57.793 50.000 0.00 0.00 0.00 4.30
125 126 0.329596 ACAAACAGCAGATCCCCTCC 59.670 55.000 0.00 0.00 0.00 4.30
126 127 0.329261 CAAACAGCAGATCCCCTCCA 59.671 55.000 0.00 0.00 0.00 3.86
127 128 1.075601 AAACAGCAGATCCCCTCCAA 58.924 50.000 0.00 0.00 0.00 3.53
128 129 1.302907 AACAGCAGATCCCCTCCAAT 58.697 50.000 0.00 0.00 0.00 3.16
129 130 2.196742 ACAGCAGATCCCCTCCAATA 57.803 50.000 0.00 0.00 0.00 1.90
130 131 1.771255 ACAGCAGATCCCCTCCAATAC 59.229 52.381 0.00 0.00 0.00 1.89
131 132 1.770658 CAGCAGATCCCCTCCAATACA 59.229 52.381 0.00 0.00 0.00 2.29
132 133 2.053244 AGCAGATCCCCTCCAATACAG 58.947 52.381 0.00 0.00 0.00 2.74
133 134 1.771255 GCAGATCCCCTCCAATACAGT 59.229 52.381 0.00 0.00 0.00 3.55
134 135 2.173569 GCAGATCCCCTCCAATACAGTT 59.826 50.000 0.00 0.00 0.00 3.16
135 136 3.813443 CAGATCCCCTCCAATACAGTTG 58.187 50.000 0.00 0.00 0.00 3.16
136 137 3.200825 CAGATCCCCTCCAATACAGTTGT 59.799 47.826 0.00 0.00 0.00 3.32
137 138 3.456277 AGATCCCCTCCAATACAGTTGTC 59.544 47.826 0.00 0.00 0.00 3.18
138 139 2.626785 TCCCCTCCAATACAGTTGTCA 58.373 47.619 0.00 0.00 0.00 3.58
139 140 3.189606 TCCCCTCCAATACAGTTGTCAT 58.810 45.455 0.00 0.00 0.00 3.06
140 141 3.199946 TCCCCTCCAATACAGTTGTCATC 59.800 47.826 0.00 0.00 0.00 2.92
141 142 3.054434 CCCCTCCAATACAGTTGTCATCA 60.054 47.826 0.00 0.00 0.00 3.07
142 143 4.194640 CCCTCCAATACAGTTGTCATCAG 58.805 47.826 0.00 0.00 0.00 2.90
143 144 4.080919 CCCTCCAATACAGTTGTCATCAGA 60.081 45.833 0.00 0.00 0.00 3.27
144 145 5.397221 CCCTCCAATACAGTTGTCATCAGAT 60.397 44.000 0.00 0.00 0.00 2.90
145 146 6.183361 CCCTCCAATACAGTTGTCATCAGATA 60.183 42.308 0.00 0.00 0.00 1.98
146 147 6.927936 CCTCCAATACAGTTGTCATCAGATAG 59.072 42.308 0.00 0.00 0.00 2.08
147 148 7.201947 CCTCCAATACAGTTGTCATCAGATAGA 60.202 40.741 0.00 0.00 0.00 1.98
148 149 8.255111 TCCAATACAGTTGTCATCAGATAGAT 57.745 34.615 0.00 0.00 37.48 1.98
161 162 6.692849 ATCAGATAGATGGACAATAGCCAA 57.307 37.500 0.00 0.00 39.21 4.52
162 163 5.858381 TCAGATAGATGGACAATAGCCAAC 58.142 41.667 0.00 0.00 39.21 3.77
163 164 5.366477 TCAGATAGATGGACAATAGCCAACA 59.634 40.000 0.00 0.00 39.21 3.33
164 165 5.699915 CAGATAGATGGACAATAGCCAACAG 59.300 44.000 0.00 0.00 39.21 3.16
165 166 5.367937 AGATAGATGGACAATAGCCAACAGT 59.632 40.000 0.00 0.00 39.21 3.55
166 167 6.554982 AGATAGATGGACAATAGCCAACAGTA 59.445 38.462 0.00 0.00 39.21 2.74
167 168 5.636903 AGATGGACAATAGCCAACAGTAT 57.363 39.130 0.00 0.00 39.21 2.12
168 169 5.615289 AGATGGACAATAGCCAACAGTATC 58.385 41.667 0.00 0.00 39.21 2.24
169 170 4.835284 TGGACAATAGCCAACAGTATCA 57.165 40.909 0.00 0.00 31.13 2.15
170 171 4.769688 TGGACAATAGCCAACAGTATCAG 58.230 43.478 0.00 0.00 31.13 2.90
171 172 4.225042 TGGACAATAGCCAACAGTATCAGT 59.775 41.667 0.00 0.00 31.13 3.41
172 173 4.572389 GGACAATAGCCAACAGTATCAGTG 59.428 45.833 0.00 0.00 0.00 3.66
173 174 5.419542 GACAATAGCCAACAGTATCAGTGA 58.580 41.667 0.00 0.00 0.00 3.41
174 175 5.804639 ACAATAGCCAACAGTATCAGTGAA 58.195 37.500 0.00 0.00 0.00 3.18
175 176 6.237901 ACAATAGCCAACAGTATCAGTGAAA 58.762 36.000 0.00 0.00 0.00 2.69
176 177 6.149474 ACAATAGCCAACAGTATCAGTGAAAC 59.851 38.462 0.00 0.00 0.00 2.78
177 178 3.412386 AGCCAACAGTATCAGTGAAACC 58.588 45.455 0.00 0.00 37.80 3.27
178 179 2.488153 GCCAACAGTATCAGTGAAACCC 59.512 50.000 0.00 0.00 37.80 4.11
179 180 3.810743 GCCAACAGTATCAGTGAAACCCT 60.811 47.826 0.00 0.00 37.80 4.34
180 181 4.564821 GCCAACAGTATCAGTGAAACCCTA 60.565 45.833 0.00 0.00 37.80 3.53
181 182 5.556915 CCAACAGTATCAGTGAAACCCTAA 58.443 41.667 0.00 0.00 37.80 2.69
182 183 6.180472 CCAACAGTATCAGTGAAACCCTAAT 58.820 40.000 0.00 0.00 37.80 1.73
183 184 6.094048 CCAACAGTATCAGTGAAACCCTAATG 59.906 42.308 0.00 0.00 37.80 1.90
184 185 6.620877 ACAGTATCAGTGAAACCCTAATGA 57.379 37.500 0.00 0.00 37.80 2.57
697 698 2.100989 AGACTTACGGTCCCACTCATC 58.899 52.381 0.00 0.00 45.54 2.92
699 700 0.102481 CTTACGGTCCCACTCATCGG 59.898 60.000 0.00 0.00 0.00 4.18
704 705 1.153549 GTCCCACTCATCGGCAGAC 60.154 63.158 0.00 0.00 0.00 3.51
717 718 2.981302 CAGACCGGGTCTCATGCA 59.019 61.111 26.53 0.00 41.37 3.96
722 723 1.348008 ACCGGGTCTCATGCATCCAT 61.348 55.000 6.32 0.00 0.00 3.41
743 784 4.933505 TGCTGACAATTCACATTTGGAA 57.066 36.364 0.00 0.00 0.00 3.53
801 844 3.452474 CTGAATCGCTCCTAGGAGTTTG 58.548 50.000 34.17 24.96 43.70 2.93
809 998 3.930035 CTCCTAGGAGTTTGACCCCTAT 58.070 50.000 28.12 0.00 37.47 2.57
913 1190 7.888250 AGCCAAAAATTGAAATTACCCAAAA 57.112 28.000 0.00 0.00 0.00 2.44
974 1252 2.577449 ACACAAACCTTCAAAAGCCG 57.423 45.000 0.00 0.00 0.00 5.52
985 1263 1.272212 TCAAAAGCCGAATTTCAGCCC 59.728 47.619 0.98 0.00 0.00 5.19
1015 1294 3.181451 ACAAGTCAGCAAAGATCCAGTCA 60.181 43.478 0.00 0.00 0.00 3.41
1016 1295 3.051081 AGTCAGCAAAGATCCAGTCAC 57.949 47.619 0.00 0.00 0.00 3.67
1039 1318 2.483491 CAGTGAGGAAAGCAGAGAAAGC 59.517 50.000 0.00 0.00 0.00 3.51
1058 1359 4.414956 AGGCCCCAGATCCACCGA 62.415 66.667 0.00 0.00 0.00 4.69
1063 1364 2.355986 CCCAGATCCACCGAACCGA 61.356 63.158 0.00 0.00 0.00 4.69
1191 1506 2.685380 CTCCCGCTCCCTTCCTGT 60.685 66.667 0.00 0.00 0.00 4.00
1201 1516 4.003788 CTTCCTGTCGGCACCGGT 62.004 66.667 0.00 0.00 40.25 5.28
1474 1789 2.707849 GCTCGCTAACCCTCGTCCA 61.708 63.158 0.00 0.00 0.00 4.02
1509 1847 3.011821 AGGGTCCTCATCTGTCTTCAGTA 59.988 47.826 0.00 0.00 41.91 2.74
1561 1903 5.924254 TCTACTTGTGTAAATCTGTCCGTTG 59.076 40.000 0.00 0.00 0.00 4.10
1653 1995 0.402121 GCCTGGATGGATAGGGAACC 59.598 60.000 0.00 0.00 45.44 3.62
1677 2019 6.038603 CCTGGTAATTGTATCACATGGTGAAG 59.961 42.308 2.87 0.00 45.96 3.02
1678 2020 6.716284 TGGTAATTGTATCACATGGTGAAGA 58.284 36.000 2.87 0.00 45.96 2.87
1679 2021 7.171653 TGGTAATTGTATCACATGGTGAAGAA 58.828 34.615 2.87 0.00 45.96 2.52
1680 2022 7.120579 TGGTAATTGTATCACATGGTGAAGAAC 59.879 37.037 2.87 3.61 45.96 3.01
1694 2042 4.011966 TGAAGAACACACAGCATCTCAT 57.988 40.909 0.00 0.00 0.00 2.90
1744 2095 4.005650 TGCCATCTGAATCAGTTCTGTTC 58.994 43.478 10.36 4.56 35.50 3.18
1762 2113 5.299531 TCTGTTCGTATCCAGGATCAGTTAG 59.700 44.000 4.75 0.00 37.52 2.34
1763 2114 4.202121 TGTTCGTATCCAGGATCAGTTAGC 60.202 45.833 4.75 0.00 0.00 3.09
1764 2115 3.833732 TCGTATCCAGGATCAGTTAGCT 58.166 45.455 4.75 0.00 0.00 3.32
1765 2116 3.570125 TCGTATCCAGGATCAGTTAGCTG 59.430 47.826 4.75 0.00 43.87 4.24
1766 2117 2.926778 ATCCAGGATCAGTTAGCTGC 57.073 50.000 0.97 0.00 42.29 5.25
1767 2118 1.571955 TCCAGGATCAGTTAGCTGCA 58.428 50.000 1.02 0.00 42.29 4.41
1768 2119 1.483827 TCCAGGATCAGTTAGCTGCAG 59.516 52.381 10.11 10.11 42.29 4.41
1769 2120 1.209019 CCAGGATCAGTTAGCTGCAGT 59.791 52.381 16.64 4.79 42.29 4.40
1770 2121 2.548875 CAGGATCAGTTAGCTGCAGTC 58.451 52.381 16.64 7.83 42.29 3.51
1771 2122 1.484240 AGGATCAGTTAGCTGCAGTCC 59.516 52.381 16.64 11.44 42.29 3.85
1772 2123 1.484240 GGATCAGTTAGCTGCAGTCCT 59.516 52.381 16.64 7.36 42.29 3.85
1773 2124 2.482839 GGATCAGTTAGCTGCAGTCCTC 60.483 54.545 16.64 4.40 42.29 3.71
1774 2125 1.632589 TCAGTTAGCTGCAGTCCTCA 58.367 50.000 16.64 0.00 42.29 3.86
1775 2126 1.547820 TCAGTTAGCTGCAGTCCTCAG 59.452 52.381 16.64 2.33 42.29 3.35
1776 2127 1.547820 CAGTTAGCTGCAGTCCTCAGA 59.452 52.381 16.64 0.00 35.77 3.27
1777 2128 1.548269 AGTTAGCTGCAGTCCTCAGAC 59.452 52.381 16.64 5.15 43.89 3.51
1778 2129 4.931571 CAGTTAGCTGCAGTCCTCAGACT 61.932 52.174 16.64 7.29 42.99 3.24
1779 2130 5.642905 CAGTTAGCTGCAGTCCTCAGACTA 61.643 50.000 16.64 2.42 42.74 2.59
1780 2131 7.390413 CAGTTAGCTGCAGTCCTCAGACTAG 62.390 52.000 16.64 0.00 42.74 2.57
1785 2136 2.809010 GTCCTCAGACTAGGCGGC 59.191 66.667 0.00 0.00 40.10 6.53
1786 2137 2.052690 GTCCTCAGACTAGGCGGCA 61.053 63.158 13.08 0.00 40.10 5.69
1787 2138 1.754621 TCCTCAGACTAGGCGGCAG 60.755 63.158 13.08 9.32 36.51 4.85
1788 2139 1.754621 CCTCAGACTAGGCGGCAGA 60.755 63.158 13.08 0.00 0.00 4.26
1789 2140 1.323271 CCTCAGACTAGGCGGCAGAA 61.323 60.000 13.08 0.00 0.00 3.02
1790 2141 0.749649 CTCAGACTAGGCGGCAGAAT 59.250 55.000 13.08 0.00 0.00 2.40
1791 2142 1.137872 CTCAGACTAGGCGGCAGAATT 59.862 52.381 13.08 0.00 0.00 2.17
1792 2143 1.137086 TCAGACTAGGCGGCAGAATTC 59.863 52.381 13.08 0.00 0.00 2.17
1793 2144 1.137872 CAGACTAGGCGGCAGAATTCT 59.862 52.381 13.08 0.88 0.00 2.40
1794 2145 1.137872 AGACTAGGCGGCAGAATTCTG 59.862 52.381 27.82 27.82 46.40 3.02
1795 2146 1.137086 GACTAGGCGGCAGAATTCTGA 59.863 52.381 34.43 14.60 46.59 3.27
1796 2147 1.555075 ACTAGGCGGCAGAATTCTGAA 59.445 47.619 34.43 13.28 46.59 3.02
1797 2148 2.027192 ACTAGGCGGCAGAATTCTGAAA 60.027 45.455 34.43 13.58 46.59 2.69
1798 2149 1.909700 AGGCGGCAGAATTCTGAAAA 58.090 45.000 34.43 0.00 46.59 2.29
1799 2150 2.238521 AGGCGGCAGAATTCTGAAAAA 58.761 42.857 34.43 0.00 46.59 1.94
1800 2151 2.029918 AGGCGGCAGAATTCTGAAAAAC 60.030 45.455 34.43 20.18 46.59 2.43
1801 2152 2.029918 GGCGGCAGAATTCTGAAAAACT 60.030 45.455 34.43 0.00 46.59 2.66
1802 2153 2.982470 GCGGCAGAATTCTGAAAAACTG 59.018 45.455 34.43 22.28 46.59 3.16
1803 2154 3.568538 CGGCAGAATTCTGAAAAACTGG 58.431 45.455 34.43 9.20 46.59 4.00
1846 2197 0.803740 CTCAGAAGGAGCTTGCTTGC 59.196 55.000 0.00 0.00 36.69 4.01
1896 2290 3.500343 CCTCAGGTCCAAAAATGTCCTT 58.500 45.455 0.00 0.00 0.00 3.36
1982 2420 4.433186 TGCAAAGATATCGGGTTTGTTG 57.567 40.909 14.11 6.17 34.32 3.33
2007 2445 0.802607 GCCTACGAAGCCGAAGACTG 60.803 60.000 0.00 0.00 39.50 3.51
2025 2463 3.321497 ACTGAAGATGAAGCAACGACTC 58.679 45.455 0.00 0.00 0.00 3.36
2047 2485 1.078143 GGAGCCGAGCAATGTCCTT 60.078 57.895 0.00 0.00 0.00 3.36
2048 2486 1.372087 GGAGCCGAGCAATGTCCTTG 61.372 60.000 0.00 0.00 37.94 3.61
2060 2498 4.022068 GCAATGTCCTTGGTTTGAAGATCA 60.022 41.667 0.00 0.00 35.25 2.92
2062 2500 4.705110 TGTCCTTGGTTTGAAGATCAGA 57.295 40.909 0.00 0.00 0.00 3.27
2077 2515 0.833287 TCAGATTAGGGGCTGCTGAC 59.167 55.000 0.00 0.00 31.24 3.51
2115 2553 0.028110 GTACTAACTACGTCGGCCCG 59.972 60.000 0.00 0.00 0.00 6.13
2157 2595 1.137086 CCCCAGACGATCAACTAGTGG 59.863 57.143 0.00 0.00 0.00 4.00
2185 2623 1.439353 CGCCAGGCACCATGATGTAC 61.439 60.000 13.30 0.00 0.00 2.90
2194 2632 4.445453 GCACCATGATGTACTCAAGATGA 58.555 43.478 0.00 0.00 37.44 2.92
2217 2655 6.481976 TGAAATCTTCTAAAGACTTGACGCAA 59.518 34.615 0.00 0.00 41.01 4.85
2218 2656 6.861065 AATCTTCTAAAGACTTGACGCAAA 57.139 33.333 0.00 0.00 41.01 3.68
2229 2667 2.254546 TGACGCAAACTCCAAGACAT 57.745 45.000 0.00 0.00 0.00 3.06
2230 2668 3.394674 TGACGCAAACTCCAAGACATA 57.605 42.857 0.00 0.00 0.00 2.29
2232 2670 3.496884 TGACGCAAACTCCAAGACATAAC 59.503 43.478 0.00 0.00 0.00 1.89
2247 2685 2.101917 ACATAACGTAATCCTCGGGGTG 59.898 50.000 0.00 0.00 0.00 4.61
2257 2695 0.186386 CCTCGGGGTGTCTATCTCCT 59.814 60.000 0.00 0.00 0.00 3.69
2267 2705 4.039366 GGTGTCTATCTCCTGATGTAACCC 59.961 50.000 0.00 0.00 34.32 4.11
2270 2708 4.896482 GTCTATCTCCTGATGTAACCCACT 59.104 45.833 0.00 0.00 34.32 4.00
2272 2710 6.550108 GTCTATCTCCTGATGTAACCCACTTA 59.450 42.308 0.00 0.00 34.32 2.24
2286 2724 4.351127 ACCCACTTAGGTGTAACTCTAGG 58.649 47.826 4.10 0.00 41.53 3.02
2287 2725 4.202760 ACCCACTTAGGTGTAACTCTAGGT 60.203 45.833 4.10 0.00 41.53 3.08
2288 2726 4.159879 CCCACTTAGGTGTAACTCTAGGTG 59.840 50.000 4.10 0.00 42.09 4.00
2292 2730 0.540454 GGTGTAACTCTAGGTGCCCC 59.460 60.000 0.00 0.00 36.74 5.80
2308 2746 1.066358 GCCCCCGGTGTCTATATAAGC 60.066 57.143 0.00 0.00 0.00 3.09
2323 2761 1.197812 TAAGCCGAGGGGTTTAGACC 58.802 55.000 4.25 0.00 40.84 3.85
2347 2787 6.931281 CCGTTGAGGTAGATTCATTCACATAT 59.069 38.462 0.00 0.00 34.51 1.78
2380 2847 8.478775 AGGTAGATCAACATGTACTATAAGCA 57.521 34.615 0.00 0.00 30.86 3.91
2384 2851 8.200024 AGATCAACATGTACTATAAGCAGGAT 57.800 34.615 0.00 0.00 0.00 3.24
2386 2853 7.360113 TCAACATGTACTATAAGCAGGATGA 57.640 36.000 0.00 0.00 39.69 2.92
2397 2864 7.939588 ACTATAAGCAGGATGAAGGATTTTACC 59.060 37.037 0.00 0.00 39.69 2.85
2477 2944 1.817099 GCCAAGATCACCAGCTCGG 60.817 63.158 0.00 1.16 42.50 4.63
2483 2950 1.613630 ATCACCAGCTCGGGACCTT 60.614 57.895 0.00 0.00 40.22 3.50
2495 2962 1.330234 GGGACCTTCTACCCGAGATC 58.670 60.000 0.00 0.00 36.56 2.75
2512 2979 1.070758 GATCTGCCGGATTTAGCTCCA 59.929 52.381 5.05 0.00 34.78 3.86
2519 2986 3.494398 GCCGGATTTAGCTCCATCAACTA 60.494 47.826 5.05 0.00 34.78 2.24
2568 3035 2.787249 CTGGTTGCGAGGAATGCG 59.213 61.111 0.00 0.00 34.24 4.73
2603 3070 2.223112 CGAAAGATGTTGGAATCGGCTG 60.223 50.000 0.00 0.00 0.00 4.85
2609 3076 0.179156 GTTGGAATCGGCTGTGCATG 60.179 55.000 0.00 0.00 0.00 4.06
2628 3095 2.357517 GGGGATGCTATGACCGCG 60.358 66.667 0.00 0.00 0.00 6.46
2642 3109 0.032130 ACCGCGACTGGTATATGCTG 59.968 55.000 8.23 0.00 41.55 4.41
2648 3115 3.490933 GCGACTGGTATATGCTGAAGTCA 60.491 47.826 15.96 0.00 34.97 3.41
2650 3117 4.683320 CGACTGGTATATGCTGAAGTCATG 59.317 45.833 15.96 0.00 34.97 3.07
2653 3120 4.129380 TGGTATATGCTGAAGTCATGTGC 58.871 43.478 0.00 0.00 0.00 4.57
2654 3121 3.185188 GGTATATGCTGAAGTCATGTGCG 59.815 47.826 0.00 0.00 0.00 5.34
2658 3125 0.390340 GCTGAAGTCATGTGCGAGGA 60.390 55.000 0.00 0.00 0.00 3.71
2664 3131 3.678056 AGTCATGTGCGAGGAAAGTAA 57.322 42.857 0.00 0.00 0.00 2.24
2665 3132 4.002906 AGTCATGTGCGAGGAAAGTAAA 57.997 40.909 0.00 0.00 0.00 2.01
2666 3133 4.385825 AGTCATGTGCGAGGAAAGTAAAA 58.614 39.130 0.00 0.00 0.00 1.52
2667 3134 4.213482 AGTCATGTGCGAGGAAAGTAAAAC 59.787 41.667 0.00 0.00 0.00 2.43
2668 3135 3.500680 TCATGTGCGAGGAAAGTAAAACC 59.499 43.478 0.00 0.00 0.00 3.27
2669 3136 2.223745 TGTGCGAGGAAAGTAAAACCC 58.776 47.619 0.00 0.00 0.00 4.11
2670 3137 2.158726 TGTGCGAGGAAAGTAAAACCCT 60.159 45.455 0.00 0.00 0.00 4.34
2671 3138 2.225727 GTGCGAGGAAAGTAAAACCCTG 59.774 50.000 0.00 0.00 0.00 4.45
2672 3139 1.810755 GCGAGGAAAGTAAAACCCTGG 59.189 52.381 0.00 0.00 0.00 4.45
2673 3140 1.810755 CGAGGAAAGTAAAACCCTGGC 59.189 52.381 0.00 0.00 0.00 4.85
2674 3141 1.810755 GAGGAAAGTAAAACCCTGGCG 59.189 52.381 0.00 0.00 0.00 5.69
2675 3142 1.144298 AGGAAAGTAAAACCCTGGCGT 59.856 47.619 0.00 0.00 0.00 5.68
2676 3143 1.958579 GGAAAGTAAAACCCTGGCGTT 59.041 47.619 0.00 0.00 0.00 4.84
2677 3144 3.148412 GGAAAGTAAAACCCTGGCGTTA 58.852 45.455 1.74 0.00 0.00 3.18
2678 3145 3.569277 GGAAAGTAAAACCCTGGCGTTAA 59.431 43.478 1.74 0.00 0.00 2.01
2679 3146 4.539870 GAAAGTAAAACCCTGGCGTTAAC 58.460 43.478 0.00 0.00 0.00 2.01
2680 3147 3.211718 AGTAAAACCCTGGCGTTAACA 57.788 42.857 6.39 0.00 0.00 2.41
2681 3148 3.553904 AGTAAAACCCTGGCGTTAACAA 58.446 40.909 6.39 0.00 0.00 2.83
2682 3149 2.875087 AAAACCCTGGCGTTAACAAC 57.125 45.000 6.39 0.00 0.00 3.32
2694 3161 2.495939 GTTAACAACGAGCTGCAATCG 58.504 47.619 16.94 16.94 45.54 3.34
2695 3162 2.073117 TAACAACGAGCTGCAATCGA 57.927 45.000 23.39 0.00 42.76 3.59
2696 3163 0.512952 AACAACGAGCTGCAATCGAC 59.487 50.000 23.39 2.88 42.76 4.20
2697 3164 1.057822 CAACGAGCTGCAATCGACG 59.942 57.895 23.39 14.26 42.76 5.12
2698 3165 2.094659 AACGAGCTGCAATCGACGG 61.095 57.895 23.39 0.00 42.76 4.79
2699 3166 3.918220 CGAGCTGCAATCGACGGC 61.918 66.667 14.16 3.31 42.76 5.68
2700 3167 3.918220 GAGCTGCAATCGACGGCG 61.918 66.667 2.87 2.87 44.36 6.46
2701 3168 4.742201 AGCTGCAATCGACGGCGT 62.742 61.111 14.65 14.65 44.36 5.68
2702 3169 4.505217 GCTGCAATCGACGGCGTG 62.505 66.667 21.19 10.44 38.98 5.34
2703 3170 3.853330 CTGCAATCGACGGCGTGG 61.853 66.667 21.19 18.41 38.98 4.94
2719 3186 3.961414 GGGCGGTGGACCAAAGGA 61.961 66.667 0.00 0.00 42.95 3.36
2720 3187 2.359975 GGCGGTGGACCAAAGGAG 60.360 66.667 0.00 0.00 35.14 3.69
2721 3188 2.359975 GCGGTGGACCAAAGGAGG 60.360 66.667 0.00 0.00 35.14 4.30
2722 3189 2.351276 CGGTGGACCAAAGGAGGG 59.649 66.667 0.00 0.00 35.14 4.30
2723 3190 2.763902 GGTGGACCAAAGGAGGGG 59.236 66.667 0.00 0.00 35.64 4.79
2724 3191 2.160853 GGTGGACCAAAGGAGGGGT 61.161 63.158 0.00 0.00 40.96 4.95
2725 3192 1.726192 GGTGGACCAAAGGAGGGGTT 61.726 60.000 0.00 0.00 37.57 4.11
2726 3193 0.539669 GTGGACCAAAGGAGGGGTTG 60.540 60.000 0.00 0.00 37.57 3.77
2727 3194 0.996762 TGGACCAAAGGAGGGGTTGT 60.997 55.000 0.00 0.00 37.57 3.32
2728 3195 1.069775 GGACCAAAGGAGGGGTTGTA 58.930 55.000 0.00 0.00 37.57 2.41
2729 3196 1.271762 GGACCAAAGGAGGGGTTGTAC 60.272 57.143 0.00 0.00 37.57 2.90
2730 3197 1.422402 GACCAAAGGAGGGGTTGTACA 59.578 52.381 0.00 0.00 37.57 2.90
2731 3198 1.854280 ACCAAAGGAGGGGTTGTACAA 59.146 47.619 3.59 3.59 32.12 2.41
2732 3199 2.449345 ACCAAAGGAGGGGTTGTACAAT 59.551 45.455 12.26 0.00 32.12 2.71
2733 3200 2.825532 CCAAAGGAGGGGTTGTACAATG 59.174 50.000 12.26 2.41 0.00 2.82
2734 3201 3.499563 CCAAAGGAGGGGTTGTACAATGA 60.500 47.826 12.26 0.00 0.00 2.57
2735 3202 3.721087 AAGGAGGGGTTGTACAATGAG 57.279 47.619 12.26 0.00 0.00 2.90
2736 3203 1.916181 AGGAGGGGTTGTACAATGAGG 59.084 52.381 12.26 0.00 0.00 3.86
2737 3204 1.064685 GGAGGGGTTGTACAATGAGGG 60.065 57.143 12.26 0.00 0.00 4.30
2738 3205 0.331616 AGGGGTTGTACAATGAGGGC 59.668 55.000 12.26 0.00 0.00 5.19
2739 3206 0.039035 GGGGTTGTACAATGAGGGCA 59.961 55.000 12.26 0.00 0.00 5.36
2740 3207 1.341976 GGGGTTGTACAATGAGGGCAT 60.342 52.381 12.26 0.00 35.92 4.40
2741 3208 1.750778 GGGTTGTACAATGAGGGCATG 59.249 52.381 12.26 0.00 34.26 4.06
2742 3209 1.750778 GGTTGTACAATGAGGGCATGG 59.249 52.381 12.26 0.00 34.26 3.66
2743 3210 1.750778 GTTGTACAATGAGGGCATGGG 59.249 52.381 12.26 0.00 34.26 4.00
2744 3211 0.395586 TGTACAATGAGGGCATGGGC 60.396 55.000 0.00 0.00 34.26 5.36
2745 3212 0.395586 GTACAATGAGGGCATGGGCA 60.396 55.000 0.00 0.00 43.71 5.36
2746 3213 0.334335 TACAATGAGGGCATGGGCAA 59.666 50.000 0.00 0.00 43.71 4.52
2747 3214 0.325860 ACAATGAGGGCATGGGCAAT 60.326 50.000 0.00 0.00 43.71 3.56
2748 3215 0.105964 CAATGAGGGCATGGGCAATG 59.894 55.000 0.00 0.00 43.71 2.82
2749 3216 1.052124 AATGAGGGCATGGGCAATGG 61.052 55.000 3.59 0.00 43.71 3.16
2750 3217 2.042639 GAGGGCATGGGCAATGGT 60.043 61.111 3.59 0.00 43.71 3.55
2751 3218 2.364579 AGGGCATGGGCAATGGTG 60.365 61.111 3.59 0.00 43.71 4.17
2752 3219 3.472726 GGGCATGGGCAATGGTGG 61.473 66.667 3.59 0.00 43.71 4.61
2760 3227 2.993264 GCAATGGTGGCAGCACCT 60.993 61.111 23.12 9.49 45.21 4.00
2761 3228 2.576832 GCAATGGTGGCAGCACCTT 61.577 57.895 23.12 10.75 45.21 3.50
2762 3229 1.290955 CAATGGTGGCAGCACCTTG 59.709 57.895 23.12 18.89 45.21 3.61
2763 3230 1.909781 AATGGTGGCAGCACCTTGG 60.910 57.895 23.12 0.00 45.21 3.61
2764 3231 2.661574 AATGGTGGCAGCACCTTGGT 62.662 55.000 23.12 1.33 45.21 3.67
2773 3240 4.290622 CACCTTGGTGCTGCCCCT 62.291 66.667 6.88 0.00 36.04 4.79
2774 3241 4.290622 ACCTTGGTGCTGCCCCTG 62.291 66.667 2.15 0.00 36.04 4.45
2783 3250 3.829226 CTGCCCCTGCCCATCCAT 61.829 66.667 0.00 0.00 36.33 3.41
2784 3251 2.369429 TGCCCCTGCCCATCCATA 60.369 61.111 0.00 0.00 36.33 2.74
2785 3252 2.116125 GCCCCTGCCCATCCATAC 59.884 66.667 0.00 0.00 0.00 2.39
2786 3253 2.846532 CCCCTGCCCATCCATACC 59.153 66.667 0.00 0.00 0.00 2.73
2787 3254 2.084300 CCCCTGCCCATCCATACCA 61.084 63.158 0.00 0.00 0.00 3.25
2788 3255 1.457604 CCCTGCCCATCCATACCAG 59.542 63.158 0.00 0.00 0.00 4.00
2789 3256 1.228367 CCTGCCCATCCATACCAGC 60.228 63.158 0.00 0.00 0.00 4.85
2790 3257 1.228367 CTGCCCATCCATACCAGCC 60.228 63.158 0.00 0.00 0.00 4.85
2791 3258 1.998444 CTGCCCATCCATACCAGCCA 61.998 60.000 0.00 0.00 0.00 4.75
2792 3259 1.229927 GCCCATCCATACCAGCCAA 59.770 57.895 0.00 0.00 0.00 4.52
2793 3260 0.178953 GCCCATCCATACCAGCCAAT 60.179 55.000 0.00 0.00 0.00 3.16
2794 3261 1.075374 GCCCATCCATACCAGCCAATA 59.925 52.381 0.00 0.00 0.00 1.90
2795 3262 2.881403 GCCCATCCATACCAGCCAATAG 60.881 54.545 0.00 0.00 0.00 1.73
2796 3263 2.644299 CCCATCCATACCAGCCAATAGA 59.356 50.000 0.00 0.00 0.00 1.98
2797 3264 3.307975 CCCATCCATACCAGCCAATAGAG 60.308 52.174 0.00 0.00 0.00 2.43
2798 3265 3.307975 CCATCCATACCAGCCAATAGAGG 60.308 52.174 0.00 0.00 0.00 3.69
2799 3266 3.060479 TCCATACCAGCCAATAGAGGT 57.940 47.619 0.00 0.00 38.14 3.85
2800 3267 2.705658 TCCATACCAGCCAATAGAGGTG 59.294 50.000 0.00 0.00 35.62 4.00
2801 3268 2.705658 CCATACCAGCCAATAGAGGTGA 59.294 50.000 0.00 0.00 35.62 4.02
2802 3269 3.244353 CCATACCAGCCAATAGAGGTGAG 60.244 52.174 0.00 0.00 35.62 3.51
2803 3270 2.254152 ACCAGCCAATAGAGGTGAGA 57.746 50.000 0.00 0.00 34.66 3.27
2804 3271 1.834263 ACCAGCCAATAGAGGTGAGAC 59.166 52.381 0.00 0.00 34.66 3.36
2805 3272 1.139853 CCAGCCAATAGAGGTGAGACC 59.860 57.143 0.00 0.00 38.99 3.85
2806 3273 1.833630 CAGCCAATAGAGGTGAGACCA 59.166 52.381 0.00 0.00 41.95 4.02
2807 3274 1.834263 AGCCAATAGAGGTGAGACCAC 59.166 52.381 0.00 0.00 41.95 4.16
2823 3290 7.184779 GTGAGACCACCGTTTAATTTAATAGC 58.815 38.462 0.00 0.00 37.33 2.97
2824 3291 6.316890 TGAGACCACCGTTTAATTTAATAGCC 59.683 38.462 0.00 0.00 0.00 3.93
2825 3292 6.181908 AGACCACCGTTTAATTTAATAGCCA 58.818 36.000 0.00 0.00 0.00 4.75
2826 3293 6.831868 AGACCACCGTTTAATTTAATAGCCAT 59.168 34.615 0.00 0.00 0.00 4.40
2827 3294 7.012989 AGACCACCGTTTAATTTAATAGCCATC 59.987 37.037 0.00 0.00 0.00 3.51
2828 3295 6.040054 ACCACCGTTTAATTTAATAGCCATCC 59.960 38.462 0.00 0.00 0.00 3.51
2829 3296 6.039941 CCACCGTTTAATTTAATAGCCATCCA 59.960 38.462 0.00 0.00 0.00 3.41
2830 3297 7.416890 CCACCGTTTAATTTAATAGCCATCCAA 60.417 37.037 0.00 0.00 0.00 3.53
2831 3298 7.434013 CACCGTTTAATTTAATAGCCATCCAAC 59.566 37.037 0.00 0.00 0.00 3.77
2832 3299 6.635239 CCGTTTAATTTAATAGCCATCCAACG 59.365 38.462 0.00 0.00 33.62 4.10
2833 3300 6.141685 CGTTTAATTTAATAGCCATCCAACGC 59.858 38.462 0.00 0.00 0.00 4.84
2834 3301 6.701145 TTAATTTAATAGCCATCCAACGCA 57.299 33.333 0.00 0.00 0.00 5.24
2835 3302 5.789643 AATTTAATAGCCATCCAACGCAT 57.210 34.783 0.00 0.00 0.00 4.73
2836 3303 5.789643 ATTTAATAGCCATCCAACGCATT 57.210 34.783 0.00 0.00 0.00 3.56
2837 3304 6.892658 ATTTAATAGCCATCCAACGCATTA 57.107 33.333 0.00 0.00 0.00 1.90
2838 3305 5.940192 TTAATAGCCATCCAACGCATTAG 57.060 39.130 0.00 0.00 0.00 1.73
2839 3306 3.492102 ATAGCCATCCAACGCATTAGT 57.508 42.857 0.00 0.00 0.00 2.24
2840 3307 1.382522 AGCCATCCAACGCATTAGTG 58.617 50.000 0.00 0.00 0.00 2.74
2841 3308 0.381801 GCCATCCAACGCATTAGTGG 59.618 55.000 0.00 0.00 0.00 4.00
2842 3309 0.381801 CCATCCAACGCATTAGTGGC 59.618 55.000 0.00 0.00 0.00 5.01
2843 3310 1.382522 CATCCAACGCATTAGTGGCT 58.617 50.000 0.00 0.00 0.00 4.75
2844 3311 1.745087 CATCCAACGCATTAGTGGCTT 59.255 47.619 0.00 0.00 0.00 4.35
2845 3312 1.448985 TCCAACGCATTAGTGGCTTC 58.551 50.000 0.00 0.00 0.00 3.86
2846 3313 0.451783 CCAACGCATTAGTGGCTTCC 59.548 55.000 0.00 0.00 0.00 3.46
2847 3314 1.453155 CAACGCATTAGTGGCTTCCT 58.547 50.000 0.00 0.00 0.00 3.36
2848 3315 1.131126 CAACGCATTAGTGGCTTCCTG 59.869 52.381 0.00 0.00 0.00 3.86
2849 3316 1.026718 ACGCATTAGTGGCTTCCTGC 61.027 55.000 0.00 0.00 41.94 4.85
2858 3325 4.704833 GCTTCCTGCCGTGAGCCA 62.705 66.667 0.00 0.00 42.71 4.75
2859 3326 2.032528 CTTCCTGCCGTGAGCCAA 59.967 61.111 0.00 0.00 42.71 4.52
2860 3327 1.377725 CTTCCTGCCGTGAGCCAAT 60.378 57.895 0.00 0.00 42.71 3.16
2861 3328 0.962356 CTTCCTGCCGTGAGCCAATT 60.962 55.000 0.00 0.00 42.71 2.32
2862 3329 0.539438 TTCCTGCCGTGAGCCAATTT 60.539 50.000 0.00 0.00 42.71 1.82
2863 3330 0.539438 TCCTGCCGTGAGCCAATTTT 60.539 50.000 0.00 0.00 42.71 1.82
2864 3331 0.318120 CCTGCCGTGAGCCAATTTTT 59.682 50.000 0.00 0.00 42.71 1.94
2865 3332 1.669795 CCTGCCGTGAGCCAATTTTTC 60.670 52.381 0.00 0.00 42.71 2.29
2866 3333 1.270550 CTGCCGTGAGCCAATTTTTCT 59.729 47.619 0.00 0.00 42.71 2.52
2867 3334 1.686052 TGCCGTGAGCCAATTTTTCTT 59.314 42.857 0.00 0.00 42.71 2.52
2868 3335 2.102252 TGCCGTGAGCCAATTTTTCTTT 59.898 40.909 0.00 0.00 42.71 2.52
2869 3336 2.731451 GCCGTGAGCCAATTTTTCTTTC 59.269 45.455 0.00 0.00 34.35 2.62
2870 3337 3.317150 CCGTGAGCCAATTTTTCTTTCC 58.683 45.455 0.00 0.00 0.00 3.13
2871 3338 3.317150 CGTGAGCCAATTTTTCTTTCCC 58.683 45.455 0.00 0.00 0.00 3.97
2872 3339 3.243704 CGTGAGCCAATTTTTCTTTCCCA 60.244 43.478 0.00 0.00 0.00 4.37
2873 3340 4.561326 CGTGAGCCAATTTTTCTTTCCCAT 60.561 41.667 0.00 0.00 0.00 4.00
2874 3341 5.308014 GTGAGCCAATTTTTCTTTCCCATT 58.692 37.500 0.00 0.00 0.00 3.16
2875 3342 5.409520 GTGAGCCAATTTTTCTTTCCCATTC 59.590 40.000 0.00 0.00 0.00 2.67
2876 3343 5.307716 TGAGCCAATTTTTCTTTCCCATTCT 59.692 36.000 0.00 0.00 0.00 2.40
2877 3344 6.183361 TGAGCCAATTTTTCTTTCCCATTCTT 60.183 34.615 0.00 0.00 0.00 2.52
2878 3345 6.604171 AGCCAATTTTTCTTTCCCATTCTTT 58.396 32.000 0.00 0.00 0.00 2.52
2879 3346 7.744733 AGCCAATTTTTCTTTCCCATTCTTTA 58.255 30.769 0.00 0.00 0.00 1.85
2880 3347 8.385491 AGCCAATTTTTCTTTCCCATTCTTTAT 58.615 29.630 0.00 0.00 0.00 1.40
2881 3348 8.453320 GCCAATTTTTCTTTCCCATTCTTTATG 58.547 33.333 0.00 0.00 0.00 1.90
2882 3349 9.506018 CCAATTTTTCTTTCCCATTCTTTATGT 57.494 29.630 0.00 0.00 31.99 2.29
2894 3361 9.502091 TCCCATTCTTTATGTATACTATTGTGC 57.498 33.333 4.17 0.00 31.99 4.57
2895 3362 8.443160 CCCATTCTTTATGTATACTATTGTGCG 58.557 37.037 4.17 0.00 31.99 5.34
2896 3363 8.988934 CCATTCTTTATGTATACTATTGTGCGT 58.011 33.333 4.17 0.00 31.99 5.24
2897 3364 9.797473 CATTCTTTATGTATACTATTGTGCGTG 57.203 33.333 4.17 0.00 0.00 5.34
2898 3365 7.940178 TCTTTATGTATACTATTGTGCGTGG 57.060 36.000 4.17 0.00 0.00 4.94
2899 3366 6.422701 TCTTTATGTATACTATTGTGCGTGGC 59.577 38.462 4.17 0.00 0.00 5.01
2900 3367 2.828877 TGTATACTATTGTGCGTGGCC 58.171 47.619 4.17 0.00 0.00 5.36
2901 3368 1.790623 GTATACTATTGTGCGTGGCCG 59.209 52.381 0.00 0.00 37.07 6.13
2902 3369 0.177141 ATACTATTGTGCGTGGCCGT 59.823 50.000 0.00 0.00 36.15 5.68
2903 3370 0.458889 TACTATTGTGCGTGGCCGTC 60.459 55.000 0.00 0.00 36.15 4.79
2904 3371 2.798501 CTATTGTGCGTGGCCGTCG 61.799 63.158 14.45 14.45 36.15 5.12
2905 3372 3.576932 TATTGTGCGTGGCCGTCGT 62.577 57.895 18.64 4.28 36.15 4.34
2911 3378 4.675029 CGTGGCCGTCGTCCCTTT 62.675 66.667 11.23 0.00 0.00 3.11
2912 3379 2.741211 GTGGCCGTCGTCCCTTTC 60.741 66.667 0.00 0.00 0.00 2.62
2913 3380 4.011517 TGGCCGTCGTCCCTTTCC 62.012 66.667 0.00 0.00 0.00 3.13
2914 3381 3.703127 GGCCGTCGTCCCTTTCCT 61.703 66.667 0.00 0.00 0.00 3.36
2915 3382 2.346365 GCCGTCGTCCCTTTCCTT 59.654 61.111 0.00 0.00 0.00 3.36
2916 3383 1.740664 GCCGTCGTCCCTTTCCTTC 60.741 63.158 0.00 0.00 0.00 3.46
2917 3384 1.079336 CCGTCGTCCCTTTCCTTCC 60.079 63.158 0.00 0.00 0.00 3.46
2918 3385 1.079336 CGTCGTCCCTTTCCTTCCC 60.079 63.158 0.00 0.00 0.00 3.97
2919 3386 1.542187 CGTCGTCCCTTTCCTTCCCT 61.542 60.000 0.00 0.00 0.00 4.20
2920 3387 0.249676 GTCGTCCCTTTCCTTCCCTC 59.750 60.000 0.00 0.00 0.00 4.30
2921 3388 0.116541 TCGTCCCTTTCCTTCCCTCT 59.883 55.000 0.00 0.00 0.00 3.69
2922 3389 0.250513 CGTCCCTTTCCTTCCCTCTG 59.749 60.000 0.00 0.00 0.00 3.35
2923 3390 1.363246 GTCCCTTTCCTTCCCTCTGT 58.637 55.000 0.00 0.00 0.00 3.41
2924 3391 1.279558 GTCCCTTTCCTTCCCTCTGTC 59.720 57.143 0.00 0.00 0.00 3.51
2925 3392 0.621082 CCCTTTCCTTCCCTCTGTCC 59.379 60.000 0.00 0.00 0.00 4.02
2926 3393 1.662686 CCTTTCCTTCCCTCTGTCCT 58.337 55.000 0.00 0.00 0.00 3.85
2927 3394 1.557371 CCTTTCCTTCCCTCTGTCCTC 59.443 57.143 0.00 0.00 0.00 3.71
2928 3395 2.545810 CTTTCCTTCCCTCTGTCCTCT 58.454 52.381 0.00 0.00 0.00 3.69
2929 3396 2.723530 TTCCTTCCCTCTGTCCTCTT 57.276 50.000 0.00 0.00 0.00 2.85
2930 3397 2.239681 TCCTTCCCTCTGTCCTCTTC 57.760 55.000 0.00 0.00 0.00 2.87
2931 3398 1.719378 TCCTTCCCTCTGTCCTCTTCT 59.281 52.381 0.00 0.00 0.00 2.85
2932 3399 2.112691 TCCTTCCCTCTGTCCTCTTCTT 59.887 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.251004 GCGAGAGAGGAACACATGTTTTT 59.749 43.478 0.00 0.00 38.56 1.94
5 6 2.808543 GCGAGAGAGGAACACATGTTTT 59.191 45.455 0.00 0.00 38.56 2.43
6 7 2.417719 GCGAGAGAGGAACACATGTTT 58.582 47.619 0.00 0.00 38.56 2.83
7 8 1.338200 GGCGAGAGAGGAACACATGTT 60.338 52.381 0.00 0.00 41.64 2.71
8 9 0.247736 GGCGAGAGAGGAACACATGT 59.752 55.000 0.00 0.00 0.00 3.21
9 10 0.803768 CGGCGAGAGAGGAACACATG 60.804 60.000 0.00 0.00 0.00 3.21
10 11 0.965866 TCGGCGAGAGAGGAACACAT 60.966 55.000 4.99 0.00 0.00 3.21
11 12 1.602605 TCGGCGAGAGAGGAACACA 60.603 57.895 4.99 0.00 0.00 3.72
12 13 1.153997 GTCGGCGAGAGAGGAACAC 60.154 63.158 11.20 0.00 0.00 3.32
13 14 2.341101 GGTCGGCGAGAGAGGAACA 61.341 63.158 11.20 0.00 0.00 3.18
14 15 2.341101 TGGTCGGCGAGAGAGGAAC 61.341 63.158 11.20 0.00 0.00 3.62
15 16 2.035155 TGGTCGGCGAGAGAGGAA 59.965 61.111 11.20 0.00 0.00 3.36
16 17 2.750637 GTGGTCGGCGAGAGAGGA 60.751 66.667 11.20 0.00 0.00 3.71
17 18 2.752238 AGTGGTCGGCGAGAGAGG 60.752 66.667 11.20 0.00 0.00 3.69
18 19 1.987704 CTCAGTGGTCGGCGAGAGAG 61.988 65.000 11.20 9.59 0.00 3.20
19 20 2.033602 TCAGTGGTCGGCGAGAGA 59.966 61.111 11.20 0.76 0.00 3.10
20 21 2.487428 CTCAGTGGTCGGCGAGAG 59.513 66.667 11.20 9.47 0.00 3.20
21 22 3.749064 GCTCAGTGGTCGGCGAGA 61.749 66.667 11.20 2.12 0.00 4.04
22 23 4.803426 GGCTCAGTGGTCGGCGAG 62.803 72.222 11.20 0.00 0.00 5.03
24 25 4.680237 TTGGCTCAGTGGTCGGCG 62.680 66.667 0.00 0.00 0.00 6.46
25 26 1.896660 TTTTGGCTCAGTGGTCGGC 60.897 57.895 0.00 0.00 0.00 5.54
26 27 1.515521 GGTTTTGGCTCAGTGGTCGG 61.516 60.000 0.00 0.00 0.00 4.79
27 28 1.841663 CGGTTTTGGCTCAGTGGTCG 61.842 60.000 0.00 0.00 0.00 4.79
28 29 0.534203 TCGGTTTTGGCTCAGTGGTC 60.534 55.000 0.00 0.00 0.00 4.02
29 30 0.106918 TTCGGTTTTGGCTCAGTGGT 60.107 50.000 0.00 0.00 0.00 4.16
30 31 1.028905 TTTCGGTTTTGGCTCAGTGG 58.971 50.000 0.00 0.00 0.00 4.00
31 32 2.861462 TTTTCGGTTTTGGCTCAGTG 57.139 45.000 0.00 0.00 0.00 3.66
48 49 8.246871 GCTGCTTCTGGTTATATTCTTCTTTTT 58.753 33.333 0.00 0.00 0.00 1.94
49 50 7.394359 TGCTGCTTCTGGTTATATTCTTCTTTT 59.606 33.333 0.00 0.00 0.00 2.27
50 51 6.886459 TGCTGCTTCTGGTTATATTCTTCTTT 59.114 34.615 0.00 0.00 0.00 2.52
51 52 6.418101 TGCTGCTTCTGGTTATATTCTTCTT 58.582 36.000 0.00 0.00 0.00 2.52
52 53 5.994250 TGCTGCTTCTGGTTATATTCTTCT 58.006 37.500 0.00 0.00 0.00 2.85
53 54 6.490534 GTTGCTGCTTCTGGTTATATTCTTC 58.509 40.000 0.00 0.00 0.00 2.87
54 55 5.065218 CGTTGCTGCTTCTGGTTATATTCTT 59.935 40.000 0.00 0.00 0.00 2.52
55 56 4.572389 CGTTGCTGCTTCTGGTTATATTCT 59.428 41.667 0.00 0.00 0.00 2.40
56 57 4.570772 TCGTTGCTGCTTCTGGTTATATTC 59.429 41.667 0.00 0.00 0.00 1.75
57 58 4.513442 TCGTTGCTGCTTCTGGTTATATT 58.487 39.130 0.00 0.00 0.00 1.28
58 59 4.137116 TCGTTGCTGCTTCTGGTTATAT 57.863 40.909 0.00 0.00 0.00 0.86
59 60 3.603158 TCGTTGCTGCTTCTGGTTATA 57.397 42.857 0.00 0.00 0.00 0.98
60 61 2.472695 TCGTTGCTGCTTCTGGTTAT 57.527 45.000 0.00 0.00 0.00 1.89
61 62 2.143122 CTTCGTTGCTGCTTCTGGTTA 58.857 47.619 0.00 0.00 0.00 2.85
62 63 0.947244 CTTCGTTGCTGCTTCTGGTT 59.053 50.000 0.00 0.00 0.00 3.67
63 64 0.106708 TCTTCGTTGCTGCTTCTGGT 59.893 50.000 0.00 0.00 0.00 4.00
64 65 0.514691 GTCTTCGTTGCTGCTTCTGG 59.485 55.000 0.00 0.00 0.00 3.86
65 66 0.514691 GGTCTTCGTTGCTGCTTCTG 59.485 55.000 0.00 0.00 0.00 3.02
66 67 0.394565 AGGTCTTCGTTGCTGCTTCT 59.605 50.000 0.00 0.00 0.00 2.85
67 68 1.069636 CAAGGTCTTCGTTGCTGCTTC 60.070 52.381 0.00 0.00 33.73 3.86
68 69 0.947244 CAAGGTCTTCGTTGCTGCTT 59.053 50.000 0.00 0.00 33.73 3.91
69 70 2.621763 CAAGGTCTTCGTTGCTGCT 58.378 52.632 0.00 0.00 33.73 4.24
74 75 1.192534 GTCTTCGCAAGGTCTTCGTTG 59.807 52.381 0.00 0.00 40.86 4.10
75 76 1.202486 TGTCTTCGCAAGGTCTTCGTT 60.202 47.619 0.00 0.00 38.47 3.85
76 77 0.387929 TGTCTTCGCAAGGTCTTCGT 59.612 50.000 0.00 0.00 38.47 3.85
77 78 1.497991 TTGTCTTCGCAAGGTCTTCG 58.502 50.000 0.00 0.00 38.47 3.79
78 79 2.160417 CCATTGTCTTCGCAAGGTCTTC 59.840 50.000 0.00 0.00 38.47 2.87
79 80 2.154462 CCATTGTCTTCGCAAGGTCTT 58.846 47.619 0.00 0.00 38.47 3.01
80 81 1.813513 CCATTGTCTTCGCAAGGTCT 58.186 50.000 0.00 0.00 38.47 3.85
81 82 0.169009 GCCATTGTCTTCGCAAGGTC 59.831 55.000 0.00 0.00 38.47 3.85
82 83 1.244019 GGCCATTGTCTTCGCAAGGT 61.244 55.000 0.00 0.00 38.47 3.50
83 84 1.243342 TGGCCATTGTCTTCGCAAGG 61.243 55.000 0.00 0.00 38.47 3.61
84 85 0.597568 TTGGCCATTGTCTTCGCAAG 59.402 50.000 6.09 0.00 0.00 4.01
85 86 1.035923 TTTGGCCATTGTCTTCGCAA 58.964 45.000 6.09 0.00 0.00 4.85
86 87 1.035923 TTTTGGCCATTGTCTTCGCA 58.964 45.000 6.09 0.00 0.00 5.10
87 88 1.792367 GTTTTTGGCCATTGTCTTCGC 59.208 47.619 6.09 0.00 0.00 4.70
88 89 3.090952 TGTTTTTGGCCATTGTCTTCG 57.909 42.857 6.09 0.00 0.00 3.79
89 90 4.633565 TGTTTGTTTTTGGCCATTGTCTTC 59.366 37.500 6.09 0.00 0.00 2.87
90 91 4.583871 TGTTTGTTTTTGGCCATTGTCTT 58.416 34.783 6.09 0.00 0.00 3.01
91 92 4.190772 CTGTTTGTTTTTGGCCATTGTCT 58.809 39.130 6.09 0.00 0.00 3.41
92 93 3.242706 GCTGTTTGTTTTTGGCCATTGTC 60.243 43.478 6.09 0.00 0.00 3.18
93 94 2.682352 GCTGTTTGTTTTTGGCCATTGT 59.318 40.909 6.09 0.00 0.00 2.71
94 95 2.681848 TGCTGTTTGTTTTTGGCCATTG 59.318 40.909 6.09 0.00 0.00 2.82
95 96 2.944349 CTGCTGTTTGTTTTTGGCCATT 59.056 40.909 6.09 0.00 0.00 3.16
96 97 2.170187 TCTGCTGTTTGTTTTTGGCCAT 59.830 40.909 6.09 0.00 0.00 4.40
97 98 1.552337 TCTGCTGTTTGTTTTTGGCCA 59.448 42.857 0.00 0.00 0.00 5.36
98 99 2.307934 TCTGCTGTTTGTTTTTGGCC 57.692 45.000 0.00 0.00 0.00 5.36
99 100 2.802247 GGATCTGCTGTTTGTTTTTGGC 59.198 45.455 0.00 0.00 0.00 4.52
100 101 3.392882 GGGATCTGCTGTTTGTTTTTGG 58.607 45.455 0.00 0.00 0.00 3.28
101 102 3.070015 AGGGGATCTGCTGTTTGTTTTTG 59.930 43.478 0.00 0.00 0.00 2.44
102 103 3.308401 AGGGGATCTGCTGTTTGTTTTT 58.692 40.909 0.00 0.00 0.00 1.94
103 104 2.893489 GAGGGGATCTGCTGTTTGTTTT 59.107 45.455 0.00 0.00 0.00 2.43
104 105 2.519013 GAGGGGATCTGCTGTTTGTTT 58.481 47.619 0.00 0.00 0.00 2.83
105 106 1.272147 GGAGGGGATCTGCTGTTTGTT 60.272 52.381 0.00 0.00 0.00 2.83
106 107 0.329596 GGAGGGGATCTGCTGTTTGT 59.670 55.000 0.00 0.00 0.00 2.83
107 108 0.329261 TGGAGGGGATCTGCTGTTTG 59.671 55.000 0.00 0.00 34.66 2.93
108 109 1.075601 TTGGAGGGGATCTGCTGTTT 58.924 50.000 0.00 0.00 34.66 2.83
109 110 1.302907 ATTGGAGGGGATCTGCTGTT 58.697 50.000 0.00 0.00 34.66 3.16
110 111 1.771255 GTATTGGAGGGGATCTGCTGT 59.229 52.381 0.00 0.00 34.66 4.40
111 112 1.770658 TGTATTGGAGGGGATCTGCTG 59.229 52.381 0.00 0.00 34.66 4.41
112 113 2.053244 CTGTATTGGAGGGGATCTGCT 58.947 52.381 0.00 0.00 34.66 4.24
113 114 1.771255 ACTGTATTGGAGGGGATCTGC 59.229 52.381 0.00 0.00 0.00 4.26
114 115 3.200825 ACAACTGTATTGGAGGGGATCTG 59.799 47.826 0.00 0.00 0.00 2.90
115 116 3.456277 GACAACTGTATTGGAGGGGATCT 59.544 47.826 0.00 0.00 0.00 2.75
116 117 3.199946 TGACAACTGTATTGGAGGGGATC 59.800 47.826 0.00 0.00 0.00 3.36
117 118 3.189606 TGACAACTGTATTGGAGGGGAT 58.810 45.455 0.00 0.00 0.00 3.85
118 119 2.626785 TGACAACTGTATTGGAGGGGA 58.373 47.619 0.00 0.00 0.00 4.81
119 120 3.054434 TGATGACAACTGTATTGGAGGGG 60.054 47.826 0.00 0.00 0.00 4.79
120 121 4.080919 TCTGATGACAACTGTATTGGAGGG 60.081 45.833 0.00 0.00 0.00 4.30
121 122 5.089970 TCTGATGACAACTGTATTGGAGG 57.910 43.478 0.00 0.00 0.00 4.30
122 123 7.720442 TCTATCTGATGACAACTGTATTGGAG 58.280 38.462 0.00 0.00 0.00 3.86
123 124 7.660030 TCTATCTGATGACAACTGTATTGGA 57.340 36.000 0.00 0.00 0.00 3.53
138 139 6.043590 TGTTGGCTATTGTCCATCTATCTGAT 59.956 38.462 0.00 0.00 35.40 2.90
139 140 5.366477 TGTTGGCTATTGTCCATCTATCTGA 59.634 40.000 0.00 0.00 32.92 3.27
140 141 5.614308 TGTTGGCTATTGTCCATCTATCTG 58.386 41.667 0.00 0.00 32.92 2.90
141 142 5.367937 ACTGTTGGCTATTGTCCATCTATCT 59.632 40.000 0.00 0.00 32.92 1.98
142 143 5.615289 ACTGTTGGCTATTGTCCATCTATC 58.385 41.667 0.00 0.00 32.92 2.08
143 144 5.636903 ACTGTTGGCTATTGTCCATCTAT 57.363 39.130 0.00 0.00 32.92 1.98
144 145 6.326323 TGATACTGTTGGCTATTGTCCATCTA 59.674 38.462 0.00 0.00 32.92 1.98
145 146 5.130975 TGATACTGTTGGCTATTGTCCATCT 59.869 40.000 0.00 0.00 32.92 2.90
146 147 5.368145 TGATACTGTTGGCTATTGTCCATC 58.632 41.667 0.00 0.00 32.92 3.51
147 148 5.104360 ACTGATACTGTTGGCTATTGTCCAT 60.104 40.000 0.00 0.00 32.92 3.41
148 149 4.225042 ACTGATACTGTTGGCTATTGTCCA 59.775 41.667 0.00 0.00 0.00 4.02
149 150 4.572389 CACTGATACTGTTGGCTATTGTCC 59.428 45.833 0.00 0.00 0.00 4.02
150 151 5.419542 TCACTGATACTGTTGGCTATTGTC 58.580 41.667 0.00 0.00 0.00 3.18
151 152 5.420725 TCACTGATACTGTTGGCTATTGT 57.579 39.130 0.00 0.00 0.00 2.71
152 153 6.403636 GGTTTCACTGATACTGTTGGCTATTG 60.404 42.308 0.41 0.00 0.00 1.90
153 154 5.648092 GGTTTCACTGATACTGTTGGCTATT 59.352 40.000 0.41 0.00 0.00 1.73
154 155 5.186198 GGTTTCACTGATACTGTTGGCTAT 58.814 41.667 0.41 0.00 0.00 2.97
155 156 4.564821 GGGTTTCACTGATACTGTTGGCTA 60.565 45.833 0.41 0.00 0.00 3.93
156 157 3.412386 GGTTTCACTGATACTGTTGGCT 58.588 45.455 0.41 0.00 0.00 4.75
157 158 2.488153 GGGTTTCACTGATACTGTTGGC 59.512 50.000 0.41 0.00 0.00 4.52
158 159 4.021102 AGGGTTTCACTGATACTGTTGG 57.979 45.455 0.41 0.00 0.00 3.77
159 160 6.878923 TCATTAGGGTTTCACTGATACTGTTG 59.121 38.462 0.41 0.00 0.00 3.33
160 161 7.016153 TCATTAGGGTTTCACTGATACTGTT 57.984 36.000 0.41 0.00 0.00 3.16
161 162 6.620877 TCATTAGGGTTTCACTGATACTGT 57.379 37.500 0.41 0.00 0.00 3.55
609 610 4.373116 TCGCTCGGTTGCCTGACC 62.373 66.667 0.00 0.00 36.31 4.02
610 611 3.112709 GTCGCTCGGTTGCCTGAC 61.113 66.667 0.00 0.00 0.00 3.51
611 612 3.611674 TGTCGCTCGGTTGCCTGA 61.612 61.111 0.00 0.00 0.00 3.86
612 613 3.414700 GTGTCGCTCGGTTGCCTG 61.415 66.667 0.00 0.00 0.00 4.85
615 616 4.059459 CACGTGTCGCTCGGTTGC 62.059 66.667 7.58 0.00 0.00 4.17
637 638 4.760047 CGACTGGGAGGGCGTTGG 62.760 72.222 0.00 0.00 0.00 3.77
659 660 2.034685 GTCTTTCTTGGTCAAAGGTGGC 59.965 50.000 0.00 0.00 36.46 5.01
660 661 3.555966 AGTCTTTCTTGGTCAAAGGTGG 58.444 45.455 0.00 0.00 36.46 4.61
699 700 2.512515 GCATGAGACCCGGTCTGC 60.513 66.667 25.30 18.37 43.53 4.26
704 705 0.887836 CATGGATGCATGAGACCCGG 60.888 60.000 21.61 0.00 34.66 5.73
717 718 5.416083 CAAATGTGAATTGTCAGCATGGAT 58.584 37.500 0.00 0.00 36.16 3.41
722 723 4.583907 TCTTCCAAATGTGAATTGTCAGCA 59.416 37.500 0.00 0.00 33.27 4.41
723 724 4.919754 GTCTTCCAAATGTGAATTGTCAGC 59.080 41.667 0.00 0.00 33.27 4.26
725 726 4.023279 CGGTCTTCCAAATGTGAATTGTCA 60.023 41.667 0.00 0.00 0.00 3.58
727 728 4.141287 TCGGTCTTCCAAATGTGAATTGT 58.859 39.130 0.00 0.00 0.00 2.71
728 729 4.455533 TCTCGGTCTTCCAAATGTGAATTG 59.544 41.667 0.00 0.00 0.00 2.32
729 730 4.651778 TCTCGGTCTTCCAAATGTGAATT 58.348 39.130 0.00 0.00 0.00 2.17
731 732 3.762407 TCTCGGTCTTCCAAATGTGAA 57.238 42.857 0.00 0.00 0.00 3.18
775 818 1.967066 CCTAGGAGCGATTCAGGTCAT 59.033 52.381 1.05 5.52 40.14 3.06
809 998 9.975218 AATTTTCTAAATCACTAAGCTCCCTAA 57.025 29.630 0.00 0.00 0.00 2.69
913 1190 3.068732 GGCCTCTGAAAAGAAAGCTTGTT 59.931 43.478 0.00 0.00 33.79 2.83
918 1195 3.733443 TTTGGCCTCTGAAAAGAAAGC 57.267 42.857 3.32 0.00 0.00 3.51
974 1252 2.103941 TGTTTGGGTTGGGCTGAAATTC 59.896 45.455 0.00 0.00 0.00 2.17
985 1263 2.957491 TTGCTGACTTGTTTGGGTTG 57.043 45.000 0.00 0.00 0.00 3.77
1015 1294 2.042464 TCTCTGCTTTCCTCACTGTGT 58.958 47.619 7.79 0.00 0.00 3.72
1016 1295 2.827800 TCTCTGCTTTCCTCACTGTG 57.172 50.000 0.17 0.17 0.00 3.66
1039 1318 3.866582 GGTGGATCTGGGGCCTCG 61.867 72.222 0.84 0.00 0.00 4.63
1095 1410 4.720902 CCACCGCCACCATGCTCA 62.721 66.667 0.00 0.00 0.00 4.26
1474 1789 2.041755 GAGGACCCTTGGAAGTTGGAAT 59.958 50.000 0.00 0.00 0.00 3.01
1509 1847 8.607459 CAAATTCGAGCTAATTCTACAGACAAT 58.393 33.333 0.00 0.00 0.00 2.71
1561 1903 4.096833 TCAGCATCAAAGGCACATGTTATC 59.903 41.667 0.00 0.00 0.00 1.75
1653 1995 6.823182 TCTTCACCATGTGATACAATTACCAG 59.177 38.462 0.00 0.00 42.40 4.00
1677 2019 4.754372 TGAAATGAGATGCTGTGTGTTC 57.246 40.909 0.00 0.00 0.00 3.18
1678 2020 4.763279 TGATGAAATGAGATGCTGTGTGTT 59.237 37.500 0.00 0.00 0.00 3.32
1679 2021 4.329392 TGATGAAATGAGATGCTGTGTGT 58.671 39.130 0.00 0.00 0.00 3.72
1680 2022 4.957759 TGATGAAATGAGATGCTGTGTG 57.042 40.909 0.00 0.00 0.00 3.82
1694 2042 6.070656 ACAGGGAAACAGAGAATTGATGAAA 58.929 36.000 0.00 0.00 0.00 2.69
1768 2119 2.010582 CTGCCGCCTAGTCTGAGGAC 62.011 65.000 0.00 0.00 39.15 3.85
1769 2120 1.754621 CTGCCGCCTAGTCTGAGGA 60.755 63.158 0.00 0.00 39.15 3.71
1770 2121 1.323271 TTCTGCCGCCTAGTCTGAGG 61.323 60.000 0.00 0.00 39.88 3.86
1771 2122 0.749649 ATTCTGCCGCCTAGTCTGAG 59.250 55.000 0.00 0.00 0.00 3.35
1772 2123 1.137086 GAATTCTGCCGCCTAGTCTGA 59.863 52.381 0.00 0.00 0.00 3.27
1773 2124 1.137872 AGAATTCTGCCGCCTAGTCTG 59.862 52.381 7.30 0.00 0.00 3.51
1774 2125 1.137872 CAGAATTCTGCCGCCTAGTCT 59.862 52.381 21.96 0.00 37.15 3.24
1775 2126 1.137086 TCAGAATTCTGCCGCCTAGTC 59.863 52.381 27.45 0.00 43.46 2.59
1776 2127 1.195115 TCAGAATTCTGCCGCCTAGT 58.805 50.000 27.45 0.00 43.46 2.57
1777 2128 2.315925 TTCAGAATTCTGCCGCCTAG 57.684 50.000 27.45 4.82 43.46 3.02
1778 2129 2.779755 TTTCAGAATTCTGCCGCCTA 57.220 45.000 27.45 9.16 43.46 3.93
1779 2130 1.909700 TTTTCAGAATTCTGCCGCCT 58.090 45.000 27.45 0.00 43.46 5.52
1780 2131 2.029918 AGTTTTTCAGAATTCTGCCGCC 60.030 45.455 27.45 14.78 43.46 6.13
1781 2132 2.982470 CAGTTTTTCAGAATTCTGCCGC 59.018 45.455 27.45 15.80 43.46 6.53
1782 2133 3.568538 CCAGTTTTTCAGAATTCTGCCG 58.431 45.455 27.45 7.70 43.46 5.69
1783 2134 3.006217 AGCCAGTTTTTCAGAATTCTGCC 59.994 43.478 27.45 13.57 43.46 4.85
1784 2135 3.985925 CAGCCAGTTTTTCAGAATTCTGC 59.014 43.478 27.45 14.76 43.46 4.26
1785 2136 4.553323 CCAGCCAGTTTTTCAGAATTCTG 58.447 43.478 26.56 26.56 45.08 3.02
1786 2137 3.575687 CCCAGCCAGTTTTTCAGAATTCT 59.424 43.478 0.88 0.88 0.00 2.40
1787 2138 3.321968 ACCCAGCCAGTTTTTCAGAATTC 59.678 43.478 0.00 0.00 0.00 2.17
1788 2139 3.070015 CACCCAGCCAGTTTTTCAGAATT 59.930 43.478 0.00 0.00 0.00 2.17
1789 2140 2.629617 CACCCAGCCAGTTTTTCAGAAT 59.370 45.455 0.00 0.00 0.00 2.40
1790 2141 2.031120 CACCCAGCCAGTTTTTCAGAA 58.969 47.619 0.00 0.00 0.00 3.02
1791 2142 1.691196 CACCCAGCCAGTTTTTCAGA 58.309 50.000 0.00 0.00 0.00 3.27
1792 2143 0.675633 CCACCCAGCCAGTTTTTCAG 59.324 55.000 0.00 0.00 0.00 3.02
1793 2144 0.260230 TCCACCCAGCCAGTTTTTCA 59.740 50.000 0.00 0.00 0.00 2.69
1794 2145 0.961753 CTCCACCCAGCCAGTTTTTC 59.038 55.000 0.00 0.00 0.00 2.29
1795 2146 1.115326 GCTCCACCCAGCCAGTTTTT 61.115 55.000 0.00 0.00 32.76 1.94
1796 2147 1.531602 GCTCCACCCAGCCAGTTTT 60.532 57.895 0.00 0.00 32.76 2.43
1797 2148 2.116125 GCTCCACCCAGCCAGTTT 59.884 61.111 0.00 0.00 32.76 2.66
1803 2154 1.699634 TCATTATAGGCTCCACCCAGC 59.300 52.381 0.00 0.00 40.58 4.85
1846 2197 1.407437 CCGAATGGGTTCCTTGAGAGG 60.407 57.143 0.00 0.00 45.02 3.69
1856 2207 1.310216 GCCTTTACGCCGAATGGGTT 61.310 55.000 0.00 0.00 41.04 4.11
1896 2290 7.783042 TGCATTCATAATCATTTTCATGTCCA 58.217 30.769 0.00 0.00 0.00 4.02
2000 2438 3.990469 TCGTTGCTTCATCTTCAGTCTTC 59.010 43.478 0.00 0.00 0.00 2.87
2007 2445 1.656095 CCGAGTCGTTGCTTCATCTTC 59.344 52.381 12.31 0.00 0.00 2.87
2038 2476 5.474532 TCTGATCTTCAAACCAAGGACATTG 59.525 40.000 0.00 0.00 38.74 2.82
2047 2485 4.628715 GCCCCTAATCTGATCTTCAAACCA 60.629 45.833 0.00 0.00 0.00 3.67
2048 2486 3.885901 GCCCCTAATCTGATCTTCAAACC 59.114 47.826 0.00 0.00 0.00 3.27
2060 2498 1.690219 CCGTCAGCAGCCCCTAATCT 61.690 60.000 0.00 0.00 0.00 2.40
2062 2500 1.995626 ACCGTCAGCAGCCCCTAAT 60.996 57.895 0.00 0.00 0.00 1.73
2115 2553 2.764128 TCGACCCAGCCCATCCTC 60.764 66.667 0.00 0.00 0.00 3.71
2140 2578 1.471676 GGCCCACTAGTTGATCGTCTG 60.472 57.143 0.00 0.00 0.00 3.51
2174 2612 7.571919 AGATTTCATCTTGAGTACATCATGGT 58.428 34.615 0.00 0.00 37.89 3.55
2194 2632 6.861065 TTGCGTCAAGTCTTTAGAAGATTT 57.139 33.333 0.00 0.00 40.18 2.17
2202 2640 3.799366 TGGAGTTTGCGTCAAGTCTTTA 58.201 40.909 4.26 0.00 0.00 1.85
2203 2641 2.639065 TGGAGTTTGCGTCAAGTCTTT 58.361 42.857 4.26 0.00 0.00 2.52
2212 2650 2.478894 CGTTATGTCTTGGAGTTTGCGT 59.521 45.455 0.00 0.00 0.00 5.24
2217 2655 6.295719 AGGATTACGTTATGTCTTGGAGTT 57.704 37.500 0.00 0.00 0.00 3.01
2218 2656 5.450137 CGAGGATTACGTTATGTCTTGGAGT 60.450 44.000 0.00 0.00 0.00 3.85
2229 2667 1.750778 GACACCCCGAGGATTACGTTA 59.249 52.381 0.00 0.00 36.73 3.18
2230 2668 0.533951 GACACCCCGAGGATTACGTT 59.466 55.000 0.00 0.00 36.73 3.99
2232 2670 1.683943 TAGACACCCCGAGGATTACG 58.316 55.000 0.00 0.00 36.73 3.18
2247 2685 4.896482 AGTGGGTTACATCAGGAGATAGAC 59.104 45.833 0.00 0.00 31.88 2.59
2286 2724 1.636148 TATATAGACACCGGGGGCAC 58.364 55.000 15.02 0.00 0.00 5.01
2287 2725 2.253610 CTTATATAGACACCGGGGGCA 58.746 52.381 15.02 0.00 0.00 5.36
2288 2726 1.066358 GCTTATATAGACACCGGGGGC 60.066 57.143 9.50 4.11 0.00 5.80
2292 2730 2.163815 CCTCGGCTTATATAGACACCGG 59.836 54.545 0.00 0.00 40.95 5.28
2308 2746 0.390735 CAACGGTCTAAACCCCTCGG 60.391 60.000 0.00 0.00 43.21 4.63
2323 2761 7.653311 TCATATGTGAATGAATCTACCTCAACG 59.347 37.037 1.90 0.00 32.97 4.10
2326 2764 9.097946 AGATCATATGTGAATGAATCTACCTCA 57.902 33.333 1.90 0.00 39.25 3.86
2365 2805 6.554982 TCCTTCATCCTGCTTATAGTACATGT 59.445 38.462 2.69 2.69 0.00 3.21
2380 2847 5.425539 TCGAAGAGGTAAAATCCTTCATCCT 59.574 40.000 0.00 0.00 38.02 3.24
2413 2880 4.507869 GGGACATAGTGTTTACCCAGGTTT 60.508 45.833 0.00 0.00 33.45 3.27
2477 2944 1.957877 CAGATCTCGGGTAGAAGGTCC 59.042 57.143 0.00 0.00 37.89 4.46
2483 2950 1.528542 CCGGCAGATCTCGGGTAGA 60.529 63.158 13.71 0.00 42.32 2.59
2495 2962 1.202687 TGATGGAGCTAAATCCGGCAG 60.203 52.381 0.00 0.00 42.77 4.85
2537 3004 1.889530 AACCAGCTCTAGCCGTGGTC 61.890 60.000 14.26 0.00 45.31 4.02
2547 3014 0.392193 CATTCCTCGCAACCAGCTCT 60.392 55.000 0.00 0.00 42.61 4.09
2555 3022 2.092291 GTCGTCGCATTCCTCGCAA 61.092 57.895 0.00 0.00 0.00 4.85
2568 3035 1.635663 CTTTCGGCCATGGTGTCGTC 61.636 60.000 14.67 0.00 0.00 4.20
2618 3085 3.759418 CATATACCAGTCGCGGTCATAG 58.241 50.000 6.13 0.00 40.67 2.23
2621 3088 0.031585 GCATATACCAGTCGCGGTCA 59.968 55.000 6.13 0.00 40.67 4.02
2626 3093 3.053455 GACTTCAGCATATACCAGTCGC 58.947 50.000 0.00 0.00 0.00 5.19
2628 3095 5.464722 CACATGACTTCAGCATATACCAGTC 59.535 44.000 0.00 0.00 32.81 3.51
2642 3109 2.417719 ACTTTCCTCGCACATGACTTC 58.582 47.619 0.00 0.00 0.00 3.01
2648 3115 2.817844 GGGTTTTACTTTCCTCGCACAT 59.182 45.455 0.00 0.00 0.00 3.21
2650 3117 2.225727 CAGGGTTTTACTTTCCTCGCAC 59.774 50.000 0.00 0.00 0.00 5.34
2653 3120 1.810755 GCCAGGGTTTTACTTTCCTCG 59.189 52.381 0.00 0.00 0.00 4.63
2654 3121 1.810755 CGCCAGGGTTTTACTTTCCTC 59.189 52.381 0.00 0.00 0.00 3.71
2658 3125 3.952967 TGTTAACGCCAGGGTTTTACTTT 59.047 39.130 5.36 0.00 0.00 2.66
2674 3141 2.156891 TCGATTGCAGCTCGTTGTTAAC 59.843 45.455 17.06 0.00 37.40 2.01
2675 3142 2.156891 GTCGATTGCAGCTCGTTGTTAA 59.843 45.455 17.06 0.00 37.40 2.01
2676 3143 1.724623 GTCGATTGCAGCTCGTTGTTA 59.275 47.619 17.06 0.00 37.40 2.41
2677 3144 0.512952 GTCGATTGCAGCTCGTTGTT 59.487 50.000 17.06 0.00 37.40 2.83
2678 3145 1.617755 CGTCGATTGCAGCTCGTTGT 61.618 55.000 17.06 0.00 37.40 3.32
2679 3146 1.057822 CGTCGATTGCAGCTCGTTG 59.942 57.895 17.06 9.44 37.40 4.10
2680 3147 2.094659 CCGTCGATTGCAGCTCGTT 61.095 57.895 17.06 0.00 37.40 3.85
2681 3148 2.507102 CCGTCGATTGCAGCTCGT 60.507 61.111 17.06 0.00 37.40 4.18
2682 3149 3.918220 GCCGTCGATTGCAGCTCG 61.918 66.667 12.95 12.95 37.47 5.03
2683 3150 3.918220 CGCCGTCGATTGCAGCTC 61.918 66.667 9.40 0.00 38.10 4.09
2684 3151 4.742201 ACGCCGTCGATTGCAGCT 62.742 61.111 0.00 0.00 39.41 4.24
2685 3152 4.505217 CACGCCGTCGATTGCAGC 62.505 66.667 0.00 0.00 39.41 5.25
2686 3153 3.853330 CCACGCCGTCGATTGCAG 61.853 66.667 0.00 5.15 39.41 4.41
2699 3166 4.939368 TTTGGTCCACCGCCCACG 62.939 66.667 0.00 0.00 39.43 4.94
2700 3167 2.983592 CTTTGGTCCACCGCCCAC 60.984 66.667 0.00 0.00 39.43 4.61
2701 3168 4.278513 CCTTTGGTCCACCGCCCA 62.279 66.667 0.00 0.00 39.43 5.36
2702 3169 3.920093 CTCCTTTGGTCCACCGCCC 62.920 68.421 0.00 0.00 39.43 6.13
2703 3170 2.359975 CTCCTTTGGTCCACCGCC 60.360 66.667 0.00 0.00 39.43 6.13
2704 3171 2.359975 CCTCCTTTGGTCCACCGC 60.360 66.667 0.00 0.00 39.43 5.68
2705 3172 2.351276 CCCTCCTTTGGTCCACCG 59.649 66.667 0.00 0.00 39.43 4.94
2706 3173 1.726192 AACCCCTCCTTTGGTCCACC 61.726 60.000 0.00 0.00 32.40 4.61
2707 3174 0.539669 CAACCCCTCCTTTGGTCCAC 60.540 60.000 0.00 0.00 32.40 4.02
2708 3175 0.996762 ACAACCCCTCCTTTGGTCCA 60.997 55.000 0.00 0.00 32.40 4.02
2709 3176 1.069775 TACAACCCCTCCTTTGGTCC 58.930 55.000 0.00 0.00 32.40 4.46
2710 3177 1.422402 TGTACAACCCCTCCTTTGGTC 59.578 52.381 0.00 0.00 32.40 4.02
2711 3178 1.525175 TGTACAACCCCTCCTTTGGT 58.475 50.000 0.00 0.00 36.06 3.67
2712 3179 2.668144 TTGTACAACCCCTCCTTTGG 57.332 50.000 3.59 0.00 0.00 3.28
2713 3180 3.758554 CTCATTGTACAACCCCTCCTTTG 59.241 47.826 11.22 2.03 0.00 2.77
2714 3181 3.245264 CCTCATTGTACAACCCCTCCTTT 60.245 47.826 11.22 0.00 0.00 3.11
2715 3182 2.308866 CCTCATTGTACAACCCCTCCTT 59.691 50.000 11.22 0.00 0.00 3.36
2716 3183 1.916181 CCTCATTGTACAACCCCTCCT 59.084 52.381 11.22 0.00 0.00 3.69
2717 3184 1.064685 CCCTCATTGTACAACCCCTCC 60.065 57.143 11.22 0.00 0.00 4.30
2718 3185 1.682087 GCCCTCATTGTACAACCCCTC 60.682 57.143 11.22 0.00 0.00 4.30
2719 3186 0.331616 GCCCTCATTGTACAACCCCT 59.668 55.000 11.22 0.00 0.00 4.79
2720 3187 0.039035 TGCCCTCATTGTACAACCCC 59.961 55.000 11.22 0.00 0.00 4.95
2721 3188 1.750778 CATGCCCTCATTGTACAACCC 59.249 52.381 11.22 0.00 0.00 4.11
2722 3189 1.750778 CCATGCCCTCATTGTACAACC 59.249 52.381 11.22 0.00 0.00 3.77
2723 3190 1.750778 CCCATGCCCTCATTGTACAAC 59.249 52.381 11.22 0.00 0.00 3.32
2724 3191 1.959508 GCCCATGCCCTCATTGTACAA 60.960 52.381 11.41 11.41 0.00 2.41
2725 3192 0.395586 GCCCATGCCCTCATTGTACA 60.396 55.000 0.00 0.00 0.00 2.90
2726 3193 0.395586 TGCCCATGCCCTCATTGTAC 60.396 55.000 0.00 0.00 36.33 2.90
2727 3194 0.334335 TTGCCCATGCCCTCATTGTA 59.666 50.000 0.00 0.00 36.33 2.41
2728 3195 0.325860 ATTGCCCATGCCCTCATTGT 60.326 50.000 0.00 0.00 36.33 2.71
2729 3196 0.105964 CATTGCCCATGCCCTCATTG 59.894 55.000 0.00 0.00 36.33 2.82
2730 3197 1.052124 CCATTGCCCATGCCCTCATT 61.052 55.000 0.00 0.00 36.33 2.57
2731 3198 1.458777 CCATTGCCCATGCCCTCAT 60.459 57.895 0.00 0.00 36.33 2.90
2732 3199 2.042741 CCATTGCCCATGCCCTCA 60.043 61.111 0.00 0.00 36.33 3.86
2733 3200 2.042639 ACCATTGCCCATGCCCTC 60.043 61.111 0.00 0.00 36.33 4.30
2734 3201 2.364579 CACCATTGCCCATGCCCT 60.365 61.111 0.00 0.00 36.33 5.19
2735 3202 3.472726 CCACCATTGCCCATGCCC 61.473 66.667 0.00 0.00 36.33 5.36
2736 3203 4.165486 GCCACCATTGCCCATGCC 62.165 66.667 0.00 0.00 36.33 4.40
2737 3204 3.379865 CTGCCACCATTGCCCATGC 62.380 63.158 0.00 0.00 38.26 4.06
2738 3205 2.897207 CTGCCACCATTGCCCATG 59.103 61.111 0.00 0.00 0.00 3.66
2739 3206 3.078836 GCTGCCACCATTGCCCAT 61.079 61.111 0.00 0.00 0.00 4.00
2740 3207 4.617556 TGCTGCCACCATTGCCCA 62.618 61.111 0.00 0.00 0.00 5.36
2741 3208 4.073200 GTGCTGCCACCATTGCCC 62.073 66.667 0.00 0.00 35.92 5.36
2757 3224 4.290622 CAGGGGCAGCACCAAGGT 62.291 66.667 18.55 0.00 42.05 3.50
2766 3233 2.463514 TATGGATGGGCAGGGGCAG 61.464 63.158 0.00 0.00 43.71 4.85
2767 3234 2.369429 TATGGATGGGCAGGGGCA 60.369 61.111 0.00 0.00 43.71 5.36
2768 3235 2.116125 GTATGGATGGGCAGGGGC 59.884 66.667 0.00 0.00 40.13 5.80
2769 3236 2.072874 CTGGTATGGATGGGCAGGGG 62.073 65.000 0.00 0.00 0.00 4.79
2770 3237 1.457604 CTGGTATGGATGGGCAGGG 59.542 63.158 0.00 0.00 0.00 4.45
2771 3238 1.228367 GCTGGTATGGATGGGCAGG 60.228 63.158 0.00 0.00 0.00 4.85
2772 3239 1.228367 GGCTGGTATGGATGGGCAG 60.228 63.158 0.00 0.00 0.00 4.85
2773 3240 1.579140 TTGGCTGGTATGGATGGGCA 61.579 55.000 0.00 0.00 0.00 5.36
2774 3241 0.178953 ATTGGCTGGTATGGATGGGC 60.179 55.000 0.00 0.00 0.00 5.36
2775 3242 2.644299 TCTATTGGCTGGTATGGATGGG 59.356 50.000 0.00 0.00 0.00 4.00
2776 3243 3.307975 CCTCTATTGGCTGGTATGGATGG 60.308 52.174 0.00 0.00 0.00 3.51
2777 3244 3.328931 ACCTCTATTGGCTGGTATGGATG 59.671 47.826 0.00 0.00 0.00 3.51
2778 3245 3.328931 CACCTCTATTGGCTGGTATGGAT 59.671 47.826 0.00 0.00 0.00 3.41
2779 3246 2.705658 CACCTCTATTGGCTGGTATGGA 59.294 50.000 0.00 0.00 0.00 3.41
2780 3247 2.705658 TCACCTCTATTGGCTGGTATGG 59.294 50.000 0.00 0.00 0.00 2.74
2781 3248 3.643320 TCTCACCTCTATTGGCTGGTATG 59.357 47.826 0.00 0.00 0.00 2.39
2782 3249 3.643792 GTCTCACCTCTATTGGCTGGTAT 59.356 47.826 0.00 0.00 0.00 2.73
2783 3250 3.031736 GTCTCACCTCTATTGGCTGGTA 58.968 50.000 0.00 0.00 0.00 3.25
2784 3251 1.834263 GTCTCACCTCTATTGGCTGGT 59.166 52.381 0.00 0.00 0.00 4.00
2785 3252 1.139853 GGTCTCACCTCTATTGGCTGG 59.860 57.143 0.00 0.00 34.73 4.85
2786 3253 1.833630 TGGTCTCACCTCTATTGGCTG 59.166 52.381 0.00 0.00 39.58 4.85
2787 3254 1.834263 GTGGTCTCACCTCTATTGGCT 59.166 52.381 0.00 0.00 39.58 4.75
2788 3255 2.317530 GTGGTCTCACCTCTATTGGC 57.682 55.000 0.00 0.00 39.58 4.52
2798 3265 7.184779 GCTATTAAATTAAACGGTGGTCTCAC 58.815 38.462 0.00 0.00 42.91 3.51
2799 3266 6.316890 GGCTATTAAATTAAACGGTGGTCTCA 59.683 38.462 0.00 0.00 0.00 3.27
2800 3267 6.316890 TGGCTATTAAATTAAACGGTGGTCTC 59.683 38.462 0.00 0.00 0.00 3.36
2801 3268 6.181908 TGGCTATTAAATTAAACGGTGGTCT 58.818 36.000 0.00 0.00 0.00 3.85
2802 3269 6.439675 TGGCTATTAAATTAAACGGTGGTC 57.560 37.500 0.00 0.00 0.00 4.02
2803 3270 6.040054 GGATGGCTATTAAATTAAACGGTGGT 59.960 38.462 0.00 0.00 0.00 4.16
2804 3271 6.039941 TGGATGGCTATTAAATTAAACGGTGG 59.960 38.462 0.00 0.00 0.00 4.61
2805 3272 7.033530 TGGATGGCTATTAAATTAAACGGTG 57.966 36.000 0.00 0.00 0.00 4.94
2806 3273 7.485810 GTTGGATGGCTATTAAATTAAACGGT 58.514 34.615 0.00 0.00 0.00 4.83
2807 3274 6.635239 CGTTGGATGGCTATTAAATTAAACGG 59.365 38.462 0.00 0.00 33.75 4.44
2808 3275 6.141685 GCGTTGGATGGCTATTAAATTAAACG 59.858 38.462 0.00 0.00 38.69 3.60
2809 3276 6.975772 TGCGTTGGATGGCTATTAAATTAAAC 59.024 34.615 0.00 0.00 0.00 2.01
2810 3277 7.101652 TGCGTTGGATGGCTATTAAATTAAA 57.898 32.000 0.00 0.00 0.00 1.52
2811 3278 6.701145 TGCGTTGGATGGCTATTAAATTAA 57.299 33.333 0.00 0.00 0.00 1.40
2812 3279 6.892658 ATGCGTTGGATGGCTATTAAATTA 57.107 33.333 0.00 0.00 0.00 1.40
2813 3280 5.789643 ATGCGTTGGATGGCTATTAAATT 57.210 34.783 0.00 0.00 0.00 1.82
2814 3281 5.789643 AATGCGTTGGATGGCTATTAAAT 57.210 34.783 0.00 0.00 0.00 1.40
2815 3282 5.825679 ACTAATGCGTTGGATGGCTATTAAA 59.174 36.000 9.24 0.00 0.00 1.52
2816 3283 5.238432 CACTAATGCGTTGGATGGCTATTAA 59.762 40.000 9.24 0.00 0.00 1.40
2817 3284 4.754618 CACTAATGCGTTGGATGGCTATTA 59.245 41.667 9.24 0.00 0.00 0.98
2818 3285 3.565482 CACTAATGCGTTGGATGGCTATT 59.435 43.478 9.24 0.00 0.00 1.73
2819 3286 3.141398 CACTAATGCGTTGGATGGCTAT 58.859 45.455 9.24 0.00 0.00 2.97
2820 3287 2.560504 CACTAATGCGTTGGATGGCTA 58.439 47.619 9.24 0.00 0.00 3.93
2821 3288 1.382522 CACTAATGCGTTGGATGGCT 58.617 50.000 9.24 0.00 0.00 4.75
2822 3289 0.381801 CCACTAATGCGTTGGATGGC 59.618 55.000 9.24 0.00 0.00 4.40
2823 3290 0.381801 GCCACTAATGCGTTGGATGG 59.618 55.000 9.24 12.75 0.00 3.51
2824 3291 1.382522 AGCCACTAATGCGTTGGATG 58.617 50.000 9.24 3.71 0.00 3.51
2825 3292 2.017049 GAAGCCACTAATGCGTTGGAT 58.983 47.619 9.24 0.00 0.00 3.41
2826 3293 1.448985 GAAGCCACTAATGCGTTGGA 58.551 50.000 9.24 0.00 0.00 3.53
2827 3294 0.451783 GGAAGCCACTAATGCGTTGG 59.548 55.000 0.08 0.00 0.00 3.77
2828 3295 1.131126 CAGGAAGCCACTAATGCGTTG 59.869 52.381 0.08 0.00 0.00 4.10
2829 3296 1.453155 CAGGAAGCCACTAATGCGTT 58.547 50.000 0.00 0.00 0.00 4.84
2830 3297 1.026718 GCAGGAAGCCACTAATGCGT 61.027 55.000 0.00 0.00 37.23 5.24
2831 3298 1.723870 GCAGGAAGCCACTAATGCG 59.276 57.895 0.00 0.00 37.23 4.73
2841 3308 4.704833 TGGCTCACGGCAGGAAGC 62.705 66.667 4.53 4.53 44.01 3.86
2847 3314 1.327303 AGAAAAATTGGCTCACGGCA 58.673 45.000 0.00 0.00 44.83 5.69
2848 3315 2.438868 AAGAAAAATTGGCTCACGGC 57.561 45.000 0.00 0.00 40.90 5.68
2849 3316 3.317150 GGAAAGAAAAATTGGCTCACGG 58.683 45.455 0.00 0.00 0.00 4.94
2850 3317 3.243704 TGGGAAAGAAAAATTGGCTCACG 60.244 43.478 0.00 0.00 0.00 4.35
2851 3318 4.335400 TGGGAAAGAAAAATTGGCTCAC 57.665 40.909 0.00 0.00 0.00 3.51
2852 3319 5.307716 AGAATGGGAAAGAAAAATTGGCTCA 59.692 36.000 0.00 0.00 0.00 4.26
2853 3320 5.798132 AGAATGGGAAAGAAAAATTGGCTC 58.202 37.500 0.00 0.00 0.00 4.70
2854 3321 5.830799 AGAATGGGAAAGAAAAATTGGCT 57.169 34.783 0.00 0.00 0.00 4.75
2855 3322 6.882610 AAAGAATGGGAAAGAAAAATTGGC 57.117 33.333 0.00 0.00 0.00 4.52
2856 3323 9.506018 ACATAAAGAATGGGAAAGAAAAATTGG 57.494 29.630 0.00 0.00 40.16 3.16
2868 3335 9.502091 GCACAATAGTATACATAAAGAATGGGA 57.498 33.333 5.50 0.00 40.16 4.37
2869 3336 8.443160 CGCACAATAGTATACATAAAGAATGGG 58.557 37.037 5.50 0.00 40.16 4.00
2870 3337 8.988934 ACGCACAATAGTATACATAAAGAATGG 58.011 33.333 5.50 0.00 40.16 3.16
2871 3338 9.797473 CACGCACAATAGTATACATAAAGAATG 57.203 33.333 5.50 0.00 41.74 2.67
2872 3339 8.988934 CCACGCACAATAGTATACATAAAGAAT 58.011 33.333 5.50 0.00 0.00 2.40
2873 3340 7.042321 GCCACGCACAATAGTATACATAAAGAA 60.042 37.037 5.50 0.00 0.00 2.52
2874 3341 6.422701 GCCACGCACAATAGTATACATAAAGA 59.577 38.462 5.50 0.00 0.00 2.52
2875 3342 6.347402 GGCCACGCACAATAGTATACATAAAG 60.347 42.308 5.50 0.00 0.00 1.85
2876 3343 5.467399 GGCCACGCACAATAGTATACATAAA 59.533 40.000 5.50 0.00 0.00 1.40
2877 3344 4.992319 GGCCACGCACAATAGTATACATAA 59.008 41.667 5.50 0.00 0.00 1.90
2878 3345 4.562082 GGCCACGCACAATAGTATACATA 58.438 43.478 5.50 0.00 0.00 2.29
2879 3346 3.399330 GGCCACGCACAATAGTATACAT 58.601 45.455 5.50 0.00 0.00 2.29
2880 3347 2.800273 CGGCCACGCACAATAGTATACA 60.800 50.000 2.24 0.00 0.00 2.29
2881 3348 1.790623 CGGCCACGCACAATAGTATAC 59.209 52.381 2.24 0.00 0.00 1.47
2882 3349 1.409790 ACGGCCACGCACAATAGTATA 59.590 47.619 2.24 0.00 46.04 1.47
2883 3350 0.177141 ACGGCCACGCACAATAGTAT 59.823 50.000 2.24 0.00 46.04 2.12
2884 3351 0.458889 GACGGCCACGCACAATAGTA 60.459 55.000 2.24 0.00 46.04 1.82
2885 3352 1.740296 GACGGCCACGCACAATAGT 60.740 57.895 2.24 0.00 46.04 2.12
2886 3353 2.798501 CGACGGCCACGCACAATAG 61.799 63.158 2.24 0.00 46.04 1.73
2887 3354 2.811747 CGACGGCCACGCACAATA 60.812 61.111 2.24 0.00 46.04 1.90
2888 3355 4.980805 ACGACGGCCACGCACAAT 62.981 61.111 17.30 0.00 46.04 2.71
2895 3362 2.741211 GAAAGGGACGACGGCCAC 60.741 66.667 23.92 11.27 0.00 5.01
2896 3363 4.011517 GGAAAGGGACGACGGCCA 62.012 66.667 23.92 0.00 0.00 5.36
2897 3364 3.249837 AAGGAAAGGGACGACGGCC 62.250 63.158 12.69 12.69 0.00 6.13
2898 3365 1.740664 GAAGGAAAGGGACGACGGC 60.741 63.158 0.00 0.00 0.00 5.68
2899 3366 1.079336 GGAAGGAAAGGGACGACGG 60.079 63.158 0.00 0.00 0.00 4.79
2900 3367 1.079336 GGGAAGGAAAGGGACGACG 60.079 63.158 0.00 0.00 0.00 5.12
2901 3368 0.249676 GAGGGAAGGAAAGGGACGAC 59.750 60.000 0.00 0.00 0.00 4.34
2902 3369 0.116541 AGAGGGAAGGAAAGGGACGA 59.883 55.000 0.00 0.00 0.00 4.20
2903 3370 0.250513 CAGAGGGAAGGAAAGGGACG 59.749 60.000 0.00 0.00 0.00 4.79
2904 3371 1.279558 GACAGAGGGAAGGAAAGGGAC 59.720 57.143 0.00 0.00 0.00 4.46
2905 3372 1.657804 GACAGAGGGAAGGAAAGGGA 58.342 55.000 0.00 0.00 0.00 4.20
2906 3373 0.621082 GGACAGAGGGAAGGAAAGGG 59.379 60.000 0.00 0.00 0.00 3.95
2907 3374 1.557371 GAGGACAGAGGGAAGGAAAGG 59.443 57.143 0.00 0.00 0.00 3.11
2908 3375 2.545810 AGAGGACAGAGGGAAGGAAAG 58.454 52.381 0.00 0.00 0.00 2.62
2909 3376 2.723530 AGAGGACAGAGGGAAGGAAA 57.276 50.000 0.00 0.00 0.00 3.13
2910 3377 2.112691 AGAAGAGGACAGAGGGAAGGAA 59.887 50.000 0.00 0.00 0.00 3.36
2911 3378 1.719378 AGAAGAGGACAGAGGGAAGGA 59.281 52.381 0.00 0.00 0.00 3.36
2912 3379 2.246091 AGAAGAGGACAGAGGGAAGG 57.754 55.000 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.