Multiple sequence alignment - TraesCS1B01G093400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G093400 chr1B 100.000 3785 0 0 1 3785 94955340 94959124 0.000000e+00 6990
1 TraesCS1B01G093400 chr1B 97.603 292 7 0 2053 2344 664055845 664055554 5.640000e-138 501
2 TraesCS1B01G093400 chr1D 91.426 2076 100 38 1 2056 59514237 59516254 0.000000e+00 2776
3 TraesCS1B01G093400 chr1D 83.698 1417 93 58 2341 3680 59516251 59517606 0.000000e+00 1210
4 TraesCS1B01G093400 chr1A 91.667 1560 75 19 1 1546 58122955 58124473 0.000000e+00 2109
5 TraesCS1B01G093400 chr1A 82.990 1505 99 76 2341 3766 58124967 58126393 0.000000e+00 1216
6 TraesCS1B01G093400 chr1A 97.260 292 8 0 2050 2341 513746119 513746410 2.630000e-136 496
7 TraesCS1B01G093400 chr1A 86.239 327 33 5 1712 2027 58124637 58124962 1.010000e-90 344
8 TraesCS1B01G093400 chr3B 98.276 290 5 0 2052 2341 133387751 133388040 3.370000e-140 508
9 TraesCS1B01G093400 chr3B 97.938 291 6 0 2053 2343 697133096 697132806 4.360000e-139 505
10 TraesCS1B01G093400 chr7B 97.611 293 7 0 2052 2344 519787230 519786938 1.570000e-138 503
11 TraesCS1B01G093400 chr7B 97.595 291 7 0 2053 2343 60066374 60066664 2.030000e-137 499
12 TraesCS1B01G093400 chr6B 97.603 292 7 0 2053 2344 713427241 713426950 5.640000e-138 501
13 TraesCS1B01G093400 chr5A 97.270 293 6 1 2049 2341 598258991 598258701 2.630000e-136 496
14 TraesCS1B01G093400 chr5A 97.260 292 7 1 2050 2341 523834166 523834456 9.450000e-136 494


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G093400 chr1B 94955340 94959124 3784 False 6990 6990 100.000000 1 3785 1 chr1B.!!$F1 3784
1 TraesCS1B01G093400 chr1D 59514237 59517606 3369 False 1993 2776 87.562000 1 3680 2 chr1D.!!$F1 3679
2 TraesCS1B01G093400 chr1A 58122955 58126393 3438 False 1223 2109 86.965333 1 3766 3 chr1A.!!$F2 3765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 506 0.037590 TGGCGTTCAAGCAGGGTAAT 59.962 50.0 0.0 0.0 39.27 1.89 F
1707 1770 0.107897 ACTGATAACCGCCGATGCAA 60.108 50.0 0.0 0.0 37.32 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2230 2305 0.102481 GATAAGCGGGCTCTTCGTGA 59.898 55.0 0.0 0.0 0.00 4.35 R
3462 3620 0.035598 TAGCACCGGCAAAGCACTTA 59.964 50.0 0.0 0.0 44.61 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 74 1.546323 CCAGCTTTCTCCTGCCTTTCA 60.546 52.381 0.00 0.00 0.00 2.69
114 119 2.859806 GCTGAAATTTGCGTGCTTCTGT 60.860 45.455 0.00 0.00 0.00 3.41
128 133 2.615869 CTTCTGTTGCTGCTACTCTCC 58.384 52.381 14.81 0.00 0.00 3.71
281 290 1.670967 GGTTCCAGACCGTAACCGAAG 60.671 57.143 0.00 0.00 39.00 3.79
303 319 0.321653 ATTTGTTTCTCGCCTCGCCT 60.322 50.000 0.00 0.00 0.00 5.52
304 320 0.949105 TTTGTTTCTCGCCTCGCCTC 60.949 55.000 0.00 0.00 0.00 4.70
305 321 2.881352 GTTTCTCGCCTCGCCTCG 60.881 66.667 0.00 0.00 0.00 4.63
306 322 4.796231 TTTCTCGCCTCGCCTCGC 62.796 66.667 0.00 0.00 0.00 5.03
373 389 1.377072 TCCGCCATCACCATGTGTG 60.377 57.895 7.72 7.72 46.88 3.82
482 506 0.037590 TGGCGTTCAAGCAGGGTAAT 59.962 50.000 0.00 0.00 39.27 1.89
489 513 4.082787 CGTTCAAGCAGGGTAATGATTTGT 60.083 41.667 0.00 0.00 0.00 2.83
616 642 7.379139 TCCTCCCTCCTTTAATTTATACCTCT 58.621 38.462 0.00 0.00 0.00 3.69
634 660 3.072476 CCTCTCTTTGGACTTTGGTGGTA 59.928 47.826 0.00 0.00 0.00 3.25
642 668 4.030913 TGGACTTTGGTGGTATCTCCTAG 58.969 47.826 0.00 0.00 37.07 3.02
648 674 2.104792 TGGTGGTATCTCCTAGCATTGC 59.895 50.000 0.00 0.00 39.84 3.56
727 758 1.808945 GTTCAGGGTGCTGATCTGTTG 59.191 52.381 1.27 0.00 32.91 3.33
744 775 4.770010 TCTGTTGGATGGTTTGGTAATTCC 59.230 41.667 0.00 0.00 0.00 3.01
756 787 1.296727 GTAATTCCGGCGGAGAAAGG 58.703 55.000 29.30 0.00 31.21 3.11
819 851 5.308825 ACTCTGTGGAATGTGGACTTTTAG 58.691 41.667 0.00 0.00 0.00 1.85
848 880 4.139038 GACCTAACTTGTGGCCAAACTTA 58.861 43.478 7.24 0.00 0.00 2.24
935 967 1.221021 GATCCGAGTGTTGGTCCCC 59.779 63.158 0.00 0.00 0.00 4.81
990 1022 1.529438 TGCTTTAGAGGCGTTGTTTCG 59.471 47.619 0.00 0.00 0.00 3.46
1323 1355 1.073722 CAGCTCCAAGAAGCCACCA 59.926 57.895 0.00 0.00 43.56 4.17
1524 1556 3.993081 CCATTATCTTCTGCCTCGTCATC 59.007 47.826 0.00 0.00 0.00 2.92
1550 1582 7.419750 CCTCTGGCAAGGTATACCAAATTAGTA 60.420 40.741 23.87 2.42 38.89 1.82
1554 1613 7.337436 TGGCAAGGTATACCAAATTAGTAACAC 59.663 37.037 23.87 1.08 38.89 3.32
1589 1648 5.530171 ACTGTCATCTCATATTTGTCATGCC 59.470 40.000 0.00 0.00 0.00 4.40
1590 1649 5.438833 TGTCATCTCATATTTGTCATGCCA 58.561 37.500 0.00 0.00 0.00 4.92
1591 1650 6.066032 TGTCATCTCATATTTGTCATGCCAT 58.934 36.000 0.00 0.00 0.00 4.40
1606 1669 6.154877 TGTCATGCCATTATGGAAGAACAAAT 59.845 34.615 16.46 0.00 40.96 2.32
1651 1714 7.978975 CAGAACCTTTCTTAGTCCTGAGATTAG 59.021 40.741 0.00 0.00 38.11 1.73
1667 1730 6.384224 TGAGATTAGCTTTGTCAAATGCAAG 58.616 36.000 16.76 1.05 38.57 4.01
1672 1735 5.014808 AGCTTTGTCAAATGCAAGTTTCT 57.985 34.783 16.76 0.00 38.57 2.52
1673 1736 5.422145 AGCTTTGTCAAATGCAAGTTTCTT 58.578 33.333 16.76 0.00 38.57 2.52
1674 1737 5.292589 AGCTTTGTCAAATGCAAGTTTCTTG 59.707 36.000 16.76 5.28 38.57 3.02
1675 1738 5.291614 GCTTTGTCAAATGCAAGTTTCTTGA 59.708 36.000 12.77 0.00 36.66 3.02
1681 1744 7.809331 TGTCAAATGCAAGTTTCTTGATGATAC 59.191 33.333 12.77 4.73 0.00 2.24
1682 1745 7.809331 GTCAAATGCAAGTTTCTTGATGATACA 59.191 33.333 12.77 1.77 0.00 2.29
1683 1746 8.358895 TCAAATGCAAGTTTCTTGATGATACAA 58.641 29.630 12.77 0.00 0.00 2.41
1684 1747 9.146984 CAAATGCAAGTTTCTTGATGATACAAT 57.853 29.630 12.77 0.00 0.00 2.71
1685 1748 8.697846 AATGCAAGTTTCTTGATGATACAATG 57.302 30.769 12.77 0.00 0.00 2.82
1686 1749 7.451501 TGCAAGTTTCTTGATGATACAATGA 57.548 32.000 12.77 0.00 0.00 2.57
1687 1750 8.058667 TGCAAGTTTCTTGATGATACAATGAT 57.941 30.769 12.77 0.00 0.00 2.45
1688 1751 9.176460 TGCAAGTTTCTTGATGATACAATGATA 57.824 29.630 12.77 0.00 0.00 2.15
1689 1752 9.443283 GCAAGTTTCTTGATGATACAATGATAC 57.557 33.333 12.77 0.00 0.00 2.24
1698 1761 8.986477 TGATGATACAATGATACTGATAACCG 57.014 34.615 0.00 0.00 0.00 4.44
1699 1762 7.545615 TGATGATACAATGATACTGATAACCGC 59.454 37.037 0.00 0.00 0.00 5.68
1700 1763 6.163476 TGATACAATGATACTGATAACCGCC 58.837 40.000 0.00 0.00 0.00 6.13
1701 1764 3.390135 ACAATGATACTGATAACCGCCG 58.610 45.455 0.00 0.00 0.00 6.46
1702 1765 3.069016 ACAATGATACTGATAACCGCCGA 59.931 43.478 0.00 0.00 0.00 5.54
1703 1766 4.245660 CAATGATACTGATAACCGCCGAT 58.754 43.478 0.00 0.00 0.00 4.18
1704 1767 3.297830 TGATACTGATAACCGCCGATG 57.702 47.619 0.00 0.00 0.00 3.84
1705 1768 1.993370 GATACTGATAACCGCCGATGC 59.007 52.381 0.00 0.00 0.00 3.91
1706 1769 0.747852 TACTGATAACCGCCGATGCA 59.252 50.000 0.00 0.00 37.32 3.96
1707 1770 0.107897 ACTGATAACCGCCGATGCAA 60.108 50.000 0.00 0.00 37.32 4.08
1708 1771 0.583438 CTGATAACCGCCGATGCAAG 59.417 55.000 0.00 0.00 37.32 4.01
1709 1772 0.107897 TGATAACCGCCGATGCAAGT 60.108 50.000 0.00 0.00 37.32 3.16
1710 1773 1.014352 GATAACCGCCGATGCAAGTT 58.986 50.000 0.00 0.00 37.39 2.66
1713 1776 0.519961 AACCGCCGATGCAAGTTAAC 59.480 50.000 0.00 0.00 37.32 2.01
1717 1780 2.241722 CGCCGATGCAAGTTAACTTTG 58.758 47.619 18.25 14.09 37.32 2.77
1725 1788 8.234546 CCGATGCAAGTTAACTTTGTATACTTT 58.765 33.333 18.25 0.00 33.11 2.66
1751 1814 7.043565 ACAATTAATCATGTCAAATCTTGGGC 58.956 34.615 0.00 0.00 0.00 5.36
1758 1821 3.355378 TGTCAAATCTTGGGCACATAGG 58.645 45.455 0.00 0.00 0.00 2.57
1767 1830 3.497103 TGGGCACATAGGATGAATCTG 57.503 47.619 0.00 0.00 0.00 2.90
1769 1832 2.373169 GGGCACATAGGATGAATCTGGA 59.627 50.000 0.00 0.00 0.00 3.86
1772 1835 4.454678 GCACATAGGATGAATCTGGACAA 58.545 43.478 0.00 0.00 0.00 3.18
1775 1838 6.148480 GCACATAGGATGAATCTGGACAATAC 59.852 42.308 0.00 0.00 0.00 1.89
1784 1847 9.553064 GATGAATCTGGACAATACTGTTATTCT 57.447 33.333 0.00 0.00 35.30 2.40
1785 1848 8.948631 TGAATCTGGACAATACTGTTATTCTC 57.051 34.615 0.00 0.00 35.30 2.87
1827 1890 5.880054 TTGAACAGCCAGACTTATTAAGC 57.120 39.130 3.28 0.00 0.00 3.09
1829 1892 5.312895 TGAACAGCCAGACTTATTAAGCAA 58.687 37.500 3.28 0.00 0.00 3.91
1830 1893 5.945784 TGAACAGCCAGACTTATTAAGCAAT 59.054 36.000 3.28 0.00 0.00 3.56
1831 1894 6.094048 TGAACAGCCAGACTTATTAAGCAATC 59.906 38.462 3.28 0.00 0.00 2.67
1832 1895 4.572389 ACAGCCAGACTTATTAAGCAATCG 59.428 41.667 3.28 0.00 0.00 3.34
1833 1896 4.811024 CAGCCAGACTTATTAAGCAATCGA 59.189 41.667 3.28 0.00 0.00 3.59
1838 1908 6.978659 CCAGACTTATTAAGCAATCGACTGTA 59.021 38.462 3.28 0.00 0.00 2.74
1839 1909 7.043325 CCAGACTTATTAAGCAATCGACTGTAC 60.043 40.741 3.28 0.00 0.00 2.90
1841 1911 7.488471 AGACTTATTAAGCAATCGACTGTACAC 59.512 37.037 3.28 0.00 0.00 2.90
1848 1918 5.660460 AGCAATCGACTGTACACATATCAA 58.340 37.500 0.00 0.00 0.00 2.57
1852 1922 7.413000 GCAATCGACTGTACACATATCAAACTT 60.413 37.037 0.00 0.00 0.00 2.66
1855 1925 7.792925 TCGACTGTACACATATCAAACTTTTG 58.207 34.615 0.00 0.00 39.48 2.44
1856 1926 7.439955 TCGACTGTACACATATCAAACTTTTGT 59.560 33.333 0.00 0.00 39.18 2.83
1932 2005 6.198650 TCCATGTCATTTATGCAAGAGTTG 57.801 37.500 0.00 0.00 0.00 3.16
2030 2105 6.808008 ATATTGAGTCAAGTGGTCAAACAG 57.192 37.500 11.91 0.00 34.02 3.16
2032 2107 3.270027 TGAGTCAAGTGGTCAAACAGTG 58.730 45.455 0.00 0.00 0.00 3.66
2052 2127 6.693315 AGTGCATACTGTTAACTGTTTGTT 57.307 33.333 25.41 15.14 37.97 2.83
2053 2128 7.795482 AGTGCATACTGTTAACTGTTTGTTA 57.205 32.000 25.41 17.23 36.59 2.41
2054 2129 8.215926 AGTGCATACTGTTAACTGTTTGTTAA 57.784 30.769 25.41 15.23 40.69 2.01
2063 2138 6.952773 TTAACTGTTTGTTAAGAGCATGGT 57.047 33.333 0.00 0.00 43.72 3.55
2064 2139 5.852282 AACTGTTTGTTAAGAGCATGGTT 57.148 34.783 0.00 0.00 37.07 3.67
2065 2140 6.952773 AACTGTTTGTTAAGAGCATGGTTA 57.047 33.333 0.00 0.00 37.07 2.85
2066 2141 6.952773 ACTGTTTGTTAAGAGCATGGTTAA 57.047 33.333 0.00 0.00 0.00 2.01
2067 2142 7.524717 ACTGTTTGTTAAGAGCATGGTTAAT 57.475 32.000 0.00 0.00 0.00 1.40
2068 2143 8.630054 ACTGTTTGTTAAGAGCATGGTTAATA 57.370 30.769 0.00 0.00 0.00 0.98
2069 2144 8.730680 ACTGTTTGTTAAGAGCATGGTTAATAG 58.269 33.333 0.00 0.00 0.00 1.73
2070 2145 8.630054 TGTTTGTTAAGAGCATGGTTAATAGT 57.370 30.769 0.00 0.00 0.00 2.12
2071 2146 9.727859 TGTTTGTTAAGAGCATGGTTAATAGTA 57.272 29.630 0.00 0.00 0.00 1.82
2075 2150 9.706691 TGTTAAGAGCATGGTTAATAGTATAGC 57.293 33.333 0.00 0.00 0.00 2.97
2076 2151 9.152595 GTTAAGAGCATGGTTAATAGTATAGCC 57.847 37.037 0.00 0.00 0.00 3.93
2077 2152 6.935240 AGAGCATGGTTAATAGTATAGCCA 57.065 37.500 0.00 3.65 39.96 4.75
2078 2153 6.940739 AGAGCATGGTTAATAGTATAGCCAG 58.059 40.000 0.00 2.11 39.18 4.85
2079 2154 5.491982 AGCATGGTTAATAGTATAGCCAGC 58.508 41.667 0.00 8.73 39.18 4.85
2080 2155 5.249393 AGCATGGTTAATAGTATAGCCAGCT 59.751 40.000 0.00 0.00 39.18 4.24
2081 2156 5.352569 GCATGGTTAATAGTATAGCCAGCTG 59.647 44.000 6.78 6.78 39.18 4.24
2082 2157 4.894784 TGGTTAATAGTATAGCCAGCTGC 58.105 43.478 8.66 3.91 41.71 5.25
2104 2179 1.972872 GCTATAAGCCAGTGCCATGT 58.027 50.000 0.00 0.00 38.69 3.21
2105 2180 1.876156 GCTATAAGCCAGTGCCATGTC 59.124 52.381 0.00 0.00 38.69 3.06
2106 2181 2.746142 GCTATAAGCCAGTGCCATGTCA 60.746 50.000 0.00 0.00 38.69 3.58
2107 2182 2.742428 ATAAGCCAGTGCCATGTCAT 57.258 45.000 0.00 0.00 38.69 3.06
2108 2183 2.042686 TAAGCCAGTGCCATGTCATC 57.957 50.000 0.00 0.00 38.69 2.92
2109 2184 0.330604 AAGCCAGTGCCATGTCATCT 59.669 50.000 0.00 0.00 38.69 2.90
2110 2185 1.206878 AGCCAGTGCCATGTCATCTA 58.793 50.000 0.00 0.00 38.69 1.98
2111 2186 1.134280 AGCCAGTGCCATGTCATCTAC 60.134 52.381 0.00 0.00 38.69 2.59
2112 2187 1.407299 GCCAGTGCCATGTCATCTACA 60.407 52.381 0.00 0.00 43.86 2.74
2113 2188 2.940971 GCCAGTGCCATGTCATCTACAA 60.941 50.000 0.00 0.00 42.70 2.41
2114 2189 2.679837 CCAGTGCCATGTCATCTACAAC 59.320 50.000 0.00 0.00 42.70 3.32
2115 2190 2.679837 CAGTGCCATGTCATCTACAACC 59.320 50.000 0.00 0.00 42.70 3.77
2116 2191 2.017049 GTGCCATGTCATCTACAACCC 58.983 52.381 0.00 0.00 42.70 4.11
2117 2192 1.632920 TGCCATGTCATCTACAACCCA 59.367 47.619 0.00 0.00 42.70 4.51
2118 2193 2.241941 TGCCATGTCATCTACAACCCAT 59.758 45.455 0.00 0.00 42.70 4.00
2119 2194 2.880890 GCCATGTCATCTACAACCCATC 59.119 50.000 0.00 0.00 42.70 3.51
2120 2195 3.434167 GCCATGTCATCTACAACCCATCT 60.434 47.826 0.00 0.00 42.70 2.90
2121 2196 4.785301 CCATGTCATCTACAACCCATCTT 58.215 43.478 0.00 0.00 42.70 2.40
2122 2197 5.687441 GCCATGTCATCTACAACCCATCTTA 60.687 44.000 0.00 0.00 42.70 2.10
2123 2198 6.537355 CCATGTCATCTACAACCCATCTTAT 58.463 40.000 0.00 0.00 42.70 1.73
2124 2199 7.679783 CCATGTCATCTACAACCCATCTTATA 58.320 38.462 0.00 0.00 42.70 0.98
2125 2200 7.821359 CCATGTCATCTACAACCCATCTTATAG 59.179 40.741 0.00 0.00 42.70 1.31
2126 2201 6.759272 TGTCATCTACAACCCATCTTATAGC 58.241 40.000 0.00 0.00 34.29 2.97
2127 2202 6.166982 GTCATCTACAACCCATCTTATAGCC 58.833 44.000 0.00 0.00 0.00 3.93
2128 2203 5.843969 TCATCTACAACCCATCTTATAGCCA 59.156 40.000 0.00 0.00 0.00 4.75
2129 2204 6.328934 TCATCTACAACCCATCTTATAGCCAA 59.671 38.462 0.00 0.00 0.00 4.52
2130 2205 5.925509 TCTACAACCCATCTTATAGCCAAC 58.074 41.667 0.00 0.00 0.00 3.77
2131 2206 4.584638 ACAACCCATCTTATAGCCAACA 57.415 40.909 0.00 0.00 0.00 3.33
2132 2207 5.129368 ACAACCCATCTTATAGCCAACAT 57.871 39.130 0.00 0.00 0.00 2.71
2133 2208 4.889409 ACAACCCATCTTATAGCCAACATG 59.111 41.667 0.00 0.00 0.00 3.21
2134 2209 4.796110 ACCCATCTTATAGCCAACATGT 57.204 40.909 0.00 0.00 0.00 3.21
2135 2210 5.904984 ACCCATCTTATAGCCAACATGTA 57.095 39.130 0.00 0.00 0.00 2.29
2136 2211 6.454223 ACCCATCTTATAGCCAACATGTAT 57.546 37.500 0.00 0.00 0.00 2.29
2137 2212 7.568128 ACCCATCTTATAGCCAACATGTATA 57.432 36.000 0.00 0.00 0.00 1.47
2138 2213 7.984475 ACCCATCTTATAGCCAACATGTATAA 58.016 34.615 0.00 0.00 0.00 0.98
2139 2214 8.614814 ACCCATCTTATAGCCAACATGTATAAT 58.385 33.333 0.00 0.00 0.00 1.28
2169 2244 9.832445 AGATCAAAAGAGTGTACTACTTTTTCA 57.168 29.630 16.31 10.34 41.36 2.69
2177 2252 9.436957 AGAGTGTACTACTTTTTCATTATGTGG 57.563 33.333 0.00 0.00 40.53 4.17
2178 2253 8.040716 AGTGTACTACTTTTTCATTATGTGGC 57.959 34.615 0.00 0.00 35.67 5.01
2179 2254 7.120726 AGTGTACTACTTTTTCATTATGTGGCC 59.879 37.037 0.00 0.00 35.67 5.36
2180 2255 5.914898 ACTACTTTTTCATTATGTGGCCC 57.085 39.130 0.00 0.00 0.00 5.80
2181 2256 5.329399 ACTACTTTTTCATTATGTGGCCCA 58.671 37.500 0.00 0.00 0.00 5.36
2182 2257 5.957774 ACTACTTTTTCATTATGTGGCCCAT 59.042 36.000 0.00 6.08 37.58 4.00
2183 2258 5.343307 ACTTTTTCATTATGTGGCCCATC 57.657 39.130 9.67 0.00 34.86 3.51
2184 2259 5.025453 ACTTTTTCATTATGTGGCCCATCT 58.975 37.500 9.67 0.00 34.86 2.90
2185 2260 5.484998 ACTTTTTCATTATGTGGCCCATCTT 59.515 36.000 9.67 0.00 34.86 2.40
2186 2261 6.013466 ACTTTTTCATTATGTGGCCCATCTTT 60.013 34.615 9.67 0.00 34.86 2.52
2187 2262 5.596836 TTTCATTATGTGGCCCATCTTTC 57.403 39.130 9.67 0.00 34.86 2.62
2188 2263 4.248174 TCATTATGTGGCCCATCTTTCA 57.752 40.909 9.67 0.00 34.86 2.69
2189 2264 4.806892 TCATTATGTGGCCCATCTTTCAT 58.193 39.130 9.67 0.00 34.86 2.57
2190 2265 5.210430 TCATTATGTGGCCCATCTTTCATT 58.790 37.500 9.67 0.00 34.86 2.57
2191 2266 5.302568 TCATTATGTGGCCCATCTTTCATTC 59.697 40.000 9.67 0.00 34.86 2.67
2192 2267 2.905415 TGTGGCCCATCTTTCATTCT 57.095 45.000 0.00 0.00 0.00 2.40
2193 2268 2.726821 TGTGGCCCATCTTTCATTCTC 58.273 47.619 0.00 0.00 0.00 2.87
2194 2269 1.672881 GTGGCCCATCTTTCATTCTCG 59.327 52.381 0.00 0.00 0.00 4.04
2195 2270 0.665298 GGCCCATCTTTCATTCTCGC 59.335 55.000 0.00 0.00 0.00 5.03
2196 2271 1.382522 GCCCATCTTTCATTCTCGCA 58.617 50.000 0.00 0.00 0.00 5.10
2197 2272 1.745087 GCCCATCTTTCATTCTCGCAA 59.255 47.619 0.00 0.00 0.00 4.85
2198 2273 2.164219 GCCCATCTTTCATTCTCGCAAA 59.836 45.455 0.00 0.00 0.00 3.68
2199 2274 3.733077 GCCCATCTTTCATTCTCGCAAAG 60.733 47.826 0.00 0.00 0.00 2.77
2200 2275 3.441572 CCCATCTTTCATTCTCGCAAAGT 59.558 43.478 0.00 0.00 0.00 2.66
2201 2276 4.409570 CCATCTTTCATTCTCGCAAAGTG 58.590 43.478 0.00 0.00 0.00 3.16
2202 2277 3.542712 TCTTTCATTCTCGCAAAGTGC 57.457 42.857 0.00 0.00 40.69 4.40
2203 2278 2.226437 TCTTTCATTCTCGCAAAGTGCC 59.774 45.455 0.00 0.00 41.12 5.01
2204 2279 1.896220 TTCATTCTCGCAAAGTGCCT 58.104 45.000 0.00 0.00 41.12 4.75
2205 2280 2.760634 TCATTCTCGCAAAGTGCCTA 57.239 45.000 0.00 0.00 41.12 3.93
2206 2281 2.621338 TCATTCTCGCAAAGTGCCTAG 58.379 47.619 0.00 0.00 41.12 3.02
2207 2282 1.667724 CATTCTCGCAAAGTGCCTAGG 59.332 52.381 3.67 3.67 41.12 3.02
2208 2283 0.973632 TTCTCGCAAAGTGCCTAGGA 59.026 50.000 14.75 0.00 41.12 2.94
2209 2284 0.532573 TCTCGCAAAGTGCCTAGGAG 59.467 55.000 14.75 0.00 41.12 3.69
2210 2285 1.079127 TCGCAAAGTGCCTAGGAGC 60.079 57.895 14.75 3.68 41.12 4.70
2211 2286 1.375908 CGCAAAGTGCCTAGGAGCA 60.376 57.895 14.75 0.22 41.12 4.26
2226 2301 3.191539 GCACGTGCTAGAGCTGGC 61.192 66.667 32.55 1.87 42.66 4.85
2227 2302 2.575993 CACGTGCTAGAGCTGGCT 59.424 61.111 0.82 0.00 42.66 4.75
2228 2303 1.518133 CACGTGCTAGAGCTGGCTC 60.518 63.158 14.02 14.02 42.66 4.70
2236 2311 4.996976 GAGCTGGCTCTTCACGAA 57.003 55.556 14.51 0.00 39.80 3.85
2237 2312 2.748268 GAGCTGGCTCTTCACGAAG 58.252 57.895 14.51 0.08 39.80 3.79
2238 2313 0.244994 GAGCTGGCTCTTCACGAAGA 59.755 55.000 14.51 9.08 44.47 2.87
2244 2319 2.261671 TCTTCACGAAGAGCCCGC 59.738 61.111 5.38 0.00 42.06 6.13
2245 2320 2.262915 CTTCACGAAGAGCCCGCT 59.737 61.111 0.20 0.00 40.79 5.52
2246 2321 1.374758 CTTCACGAAGAGCCCGCTT 60.375 57.895 0.20 0.00 40.79 4.68
2247 2322 0.108804 CTTCACGAAGAGCCCGCTTA 60.109 55.000 0.20 0.00 40.79 3.09
2248 2323 0.535335 TTCACGAAGAGCCCGCTTAT 59.465 50.000 0.00 0.00 0.00 1.73
2249 2324 0.102481 TCACGAAGAGCCCGCTTATC 59.898 55.000 0.00 0.00 0.00 1.75
2250 2325 0.103208 CACGAAGAGCCCGCTTATCT 59.897 55.000 0.00 0.00 0.00 1.98
2251 2326 0.824759 ACGAAGAGCCCGCTTATCTT 59.175 50.000 0.00 0.00 36.02 2.40
2252 2327 1.202428 ACGAAGAGCCCGCTTATCTTC 60.202 52.381 6.96 6.96 43.51 2.87
2253 2328 1.067821 CGAAGAGCCCGCTTATCTTCT 59.932 52.381 12.57 0.00 44.34 2.85
2254 2329 2.749776 GAAGAGCCCGCTTATCTTCTC 58.250 52.381 8.96 0.00 43.57 2.87
2255 2330 2.080654 AGAGCCCGCTTATCTTCTCT 57.919 50.000 0.00 0.00 0.00 3.10
2256 2331 1.960689 AGAGCCCGCTTATCTTCTCTC 59.039 52.381 0.00 0.00 0.00 3.20
2257 2332 1.960689 GAGCCCGCTTATCTTCTCTCT 59.039 52.381 0.00 0.00 0.00 3.10
2258 2333 1.960689 AGCCCGCTTATCTTCTCTCTC 59.039 52.381 0.00 0.00 0.00 3.20
2259 2334 1.000394 GCCCGCTTATCTTCTCTCTCC 60.000 57.143 0.00 0.00 0.00 3.71
2260 2335 2.593026 CCCGCTTATCTTCTCTCTCCT 58.407 52.381 0.00 0.00 0.00 3.69
2261 2336 2.556622 CCCGCTTATCTTCTCTCTCCTC 59.443 54.545 0.00 0.00 0.00 3.71
2262 2337 3.486383 CCGCTTATCTTCTCTCTCCTCT 58.514 50.000 0.00 0.00 0.00 3.69
2263 2338 3.888930 CCGCTTATCTTCTCTCTCCTCTT 59.111 47.826 0.00 0.00 0.00 2.85
2264 2339 4.023193 CCGCTTATCTTCTCTCTCCTCTTC 60.023 50.000 0.00 0.00 0.00 2.87
2265 2340 4.821805 CGCTTATCTTCTCTCTCCTCTTCT 59.178 45.833 0.00 0.00 0.00 2.85
2266 2341 5.049405 CGCTTATCTTCTCTCTCCTCTTCTC 60.049 48.000 0.00 0.00 0.00 2.87
2267 2342 6.064717 GCTTATCTTCTCTCTCCTCTTCTCT 58.935 44.000 0.00 0.00 0.00 3.10
2268 2343 6.547510 GCTTATCTTCTCTCTCCTCTTCTCTT 59.452 42.308 0.00 0.00 0.00 2.85
2269 2344 7.068716 GCTTATCTTCTCTCTCCTCTTCTCTTT 59.931 40.741 0.00 0.00 0.00 2.52
2270 2345 8.519799 TTATCTTCTCTCTCCTCTTCTCTTTC 57.480 38.462 0.00 0.00 0.00 2.62
2271 2346 5.261216 TCTTCTCTCTCCTCTTCTCTTTCC 58.739 45.833 0.00 0.00 0.00 3.13
2272 2347 4.946160 TCTCTCTCCTCTTCTCTTTCCT 57.054 45.455 0.00 0.00 0.00 3.36
2273 2348 4.855340 TCTCTCTCCTCTTCTCTTTCCTC 58.145 47.826 0.00 0.00 0.00 3.71
2274 2349 3.954258 CTCTCTCCTCTTCTCTTTCCTCC 59.046 52.174 0.00 0.00 0.00 4.30
2275 2350 3.335183 TCTCTCCTCTTCTCTTTCCTCCA 59.665 47.826 0.00 0.00 0.00 3.86
2276 2351 4.093011 CTCTCCTCTTCTCTTTCCTCCAA 58.907 47.826 0.00 0.00 0.00 3.53
2277 2352 3.835395 TCTCCTCTTCTCTTTCCTCCAAC 59.165 47.826 0.00 0.00 0.00 3.77
2278 2353 3.837731 CTCCTCTTCTCTTTCCTCCAACT 59.162 47.826 0.00 0.00 0.00 3.16
2279 2354 5.011982 TCCTCTTCTCTTTCCTCCAACTA 57.988 43.478 0.00 0.00 0.00 2.24
2280 2355 5.403512 TCCTCTTCTCTTTCCTCCAACTAA 58.596 41.667 0.00 0.00 0.00 2.24
2281 2356 5.482175 TCCTCTTCTCTTTCCTCCAACTAAG 59.518 44.000 0.00 0.00 0.00 2.18
2282 2357 5.153950 TCTTCTCTTTCCTCCAACTAAGC 57.846 43.478 0.00 0.00 0.00 3.09
2283 2358 4.593206 TCTTCTCTTTCCTCCAACTAAGCA 59.407 41.667 0.00 0.00 0.00 3.91
2284 2359 4.974645 TCTCTTTCCTCCAACTAAGCAA 57.025 40.909 0.00 0.00 0.00 3.91
2285 2360 5.304686 TCTCTTTCCTCCAACTAAGCAAA 57.695 39.130 0.00 0.00 0.00 3.68
2286 2361 5.690865 TCTCTTTCCTCCAACTAAGCAAAA 58.309 37.500 0.00 0.00 0.00 2.44
2287 2362 6.126409 TCTCTTTCCTCCAACTAAGCAAAAA 58.874 36.000 0.00 0.00 0.00 1.94
2288 2363 6.777580 TCTCTTTCCTCCAACTAAGCAAAAAT 59.222 34.615 0.00 0.00 0.00 1.82
2289 2364 7.942341 TCTCTTTCCTCCAACTAAGCAAAAATA 59.058 33.333 0.00 0.00 0.00 1.40
2290 2365 8.650143 TCTTTCCTCCAACTAAGCAAAAATAT 57.350 30.769 0.00 0.00 0.00 1.28
2291 2366 9.747898 TCTTTCCTCCAACTAAGCAAAAATATA 57.252 29.630 0.00 0.00 0.00 0.86
2292 2367 9.788960 CTTTCCTCCAACTAAGCAAAAATATAC 57.211 33.333 0.00 0.00 0.00 1.47
2293 2368 9.528489 TTTCCTCCAACTAAGCAAAAATATACT 57.472 29.630 0.00 0.00 0.00 2.12
2295 2370 9.832445 TCCTCCAACTAAGCAAAAATATACTAG 57.168 33.333 0.00 0.00 0.00 2.57
2296 2371 9.614792 CCTCCAACTAAGCAAAAATATACTAGT 57.385 33.333 0.00 0.00 0.00 2.57
2315 2390 7.560796 ACTAGTTTATTCCATATAGCCTGCT 57.439 36.000 0.00 0.00 0.00 4.24
2316 2391 7.390027 ACTAGTTTATTCCATATAGCCTGCTG 58.610 38.462 0.97 0.00 0.00 4.41
2317 2392 6.439636 AGTTTATTCCATATAGCCTGCTGA 57.560 37.500 0.97 0.00 0.00 4.26
2318 2393 6.234177 AGTTTATTCCATATAGCCTGCTGAC 58.766 40.000 0.97 0.00 0.00 3.51
2319 2394 6.043706 AGTTTATTCCATATAGCCTGCTGACT 59.956 38.462 0.97 0.00 0.00 3.41
2320 2395 4.550076 ATTCCATATAGCCTGCTGACTC 57.450 45.455 0.97 0.00 0.00 3.36
2321 2396 2.962859 TCCATATAGCCTGCTGACTCA 58.037 47.619 0.97 0.00 0.00 3.41
2322 2397 3.514539 TCCATATAGCCTGCTGACTCAT 58.485 45.455 0.97 0.00 0.00 2.90
2323 2398 3.513119 TCCATATAGCCTGCTGACTCATC 59.487 47.826 0.97 0.00 0.00 2.92
2324 2399 3.514706 CCATATAGCCTGCTGACTCATCT 59.485 47.826 0.97 0.00 0.00 2.90
2325 2400 4.496360 CATATAGCCTGCTGACTCATCTG 58.504 47.826 0.97 0.00 0.00 2.90
2326 2401 1.857965 TAGCCTGCTGACTCATCTGT 58.142 50.000 0.97 0.00 0.00 3.41
2327 2402 1.857965 AGCCTGCTGACTCATCTGTA 58.142 50.000 0.00 0.00 0.00 2.74
2328 2403 2.396608 AGCCTGCTGACTCATCTGTAT 58.603 47.619 0.00 0.00 0.00 2.29
2329 2404 2.770802 AGCCTGCTGACTCATCTGTATT 59.229 45.455 0.00 0.00 0.00 1.89
2330 2405 3.963374 AGCCTGCTGACTCATCTGTATTA 59.037 43.478 0.00 0.00 0.00 0.98
2331 2406 4.592351 AGCCTGCTGACTCATCTGTATTAT 59.408 41.667 0.00 0.00 0.00 1.28
2332 2407 5.777223 AGCCTGCTGACTCATCTGTATTATA 59.223 40.000 0.00 0.00 0.00 0.98
2333 2408 5.866633 GCCTGCTGACTCATCTGTATTATAC 59.133 44.000 0.00 0.00 0.00 1.47
2334 2409 6.295011 GCCTGCTGACTCATCTGTATTATACT 60.295 42.308 3.92 0.00 0.00 2.12
2335 2410 7.665690 CCTGCTGACTCATCTGTATTATACTT 58.334 38.462 3.92 0.00 0.00 2.24
2336 2411 7.598118 CCTGCTGACTCATCTGTATTATACTTG 59.402 40.741 3.92 0.21 0.00 3.16
2337 2412 6.925718 TGCTGACTCATCTGTATTATACTTGC 59.074 38.462 3.92 0.00 0.00 4.01
2338 2413 7.151308 GCTGACTCATCTGTATTATACTTGCT 58.849 38.462 3.92 0.00 0.00 3.91
2339 2414 7.328249 GCTGACTCATCTGTATTATACTTGCTC 59.672 40.741 3.92 0.10 0.00 4.26
2372 2447 3.056465 TGTTCAAAAAGCCGTTGGTCTTT 60.056 39.130 1.20 1.20 33.13 2.52
2465 2541 0.539986 TAAGCTTCCACGGATCACCC 59.460 55.000 0.00 0.00 0.00 4.61
2535 2611 4.995487 ACAAGAAGAACCATTCTAACGTCC 59.005 41.667 0.00 0.00 38.59 4.79
2555 2631 0.680061 GACCTCACGGTTCAACCTCT 59.320 55.000 4.68 0.00 45.73 3.69
2558 2634 0.034059 CTCACGGTTCAACCTCTGCT 59.966 55.000 4.68 0.00 35.66 4.24
2570 2646 0.835941 CCTCTGCTGCTCCCAAGTAT 59.164 55.000 0.00 0.00 0.00 2.12
2571 2647 1.474677 CCTCTGCTGCTCCCAAGTATG 60.475 57.143 0.00 0.00 0.00 2.39
2574 2650 0.983467 TGCTGCTCCCAAGTATGTGA 59.017 50.000 0.00 0.00 0.00 3.58
2579 2655 3.153919 TGCTCCCAAGTATGTGAAAACC 58.846 45.455 0.00 0.00 0.00 3.27
2610 2686 2.821378 TCCAAACAATGCATCTCACTGG 59.179 45.455 0.00 4.09 0.00 4.00
2616 2692 0.994247 ATGCATCTCACTGGAACCCA 59.006 50.000 0.00 0.00 0.00 4.51
2620 2696 2.029918 GCATCTCACTGGAACCCAAAAC 60.030 50.000 0.00 0.00 30.80 2.43
2626 2702 2.100749 CACTGGAACCCAAAACCTCAAC 59.899 50.000 0.00 0.00 30.80 3.18
2627 2703 1.686587 CTGGAACCCAAAACCTCAACC 59.313 52.381 0.00 0.00 30.80 3.77
2635 2712 0.853530 AAAACCTCAACCCTGGAGCT 59.146 50.000 0.00 0.00 0.00 4.09
2640 2717 1.274712 CTCAACCCTGGAGCTTCTCT 58.725 55.000 0.00 0.00 0.00 3.10
2641 2718 1.627834 CTCAACCCTGGAGCTTCTCTT 59.372 52.381 0.00 0.00 0.00 2.85
2642 2719 1.349026 TCAACCCTGGAGCTTCTCTTG 59.651 52.381 0.00 0.00 0.00 3.02
2645 2722 1.349357 ACCCTGGAGCTTCTCTTGTTC 59.651 52.381 0.00 0.00 0.00 3.18
2646 2723 1.627834 CCCTGGAGCTTCTCTTGTTCT 59.372 52.381 0.00 0.00 0.00 3.01
2659 2742 4.067896 CTCTTGTTCTGTGTACCATGCTT 58.932 43.478 0.00 0.00 0.00 3.91
2672 2755 0.379316 CATGCTTTGATGCGCTGCTA 59.621 50.000 9.73 0.00 35.36 3.49
2680 2763 0.317603 GATGCGCTGCTAATGCCTTG 60.318 55.000 9.73 0.00 38.71 3.61
2834 2917 2.362889 CCCTCCCGCTTGCCATTT 60.363 61.111 0.00 0.00 0.00 2.32
2835 2918 1.984026 CCCTCCCGCTTGCCATTTT 60.984 57.895 0.00 0.00 0.00 1.82
2836 2919 1.216178 CCTCCCGCTTGCCATTTTG 59.784 57.895 0.00 0.00 0.00 2.44
2837 2920 1.250154 CCTCCCGCTTGCCATTTTGA 61.250 55.000 0.00 0.00 0.00 2.69
2838 2921 0.602562 CTCCCGCTTGCCATTTTGAA 59.397 50.000 0.00 0.00 0.00 2.69
2839 2922 0.602562 TCCCGCTTGCCATTTTGAAG 59.397 50.000 0.00 0.00 0.00 3.02
2840 2923 1.015607 CCCGCTTGCCATTTTGAAGC 61.016 55.000 0.00 0.00 39.00 3.86
2841 2924 0.037975 CCGCTTGCCATTTTGAAGCT 60.038 50.000 0.00 0.00 40.00 3.74
2842 2925 1.343506 CGCTTGCCATTTTGAAGCTC 58.656 50.000 0.00 0.00 40.00 4.09
2843 2926 1.718396 GCTTGCCATTTTGAAGCTCC 58.282 50.000 0.00 0.00 39.24 4.70
2844 2927 1.673923 GCTTGCCATTTTGAAGCTCCC 60.674 52.381 0.00 0.00 39.24 4.30
2845 2928 0.975887 TTGCCATTTTGAAGCTCCCC 59.024 50.000 0.00 0.00 0.00 4.81
2846 2929 0.904394 TGCCATTTTGAAGCTCCCCC 60.904 55.000 0.00 0.00 0.00 5.40
2870 2954 1.870064 CCATTTTGAAGCTCCCCCAT 58.130 50.000 0.00 0.00 0.00 4.00
2883 2967 4.051167 CCCATGACAGGCTGGCCA 62.051 66.667 19.69 15.75 38.92 5.36
2952 3038 3.418684 AAATGAACCCTCTAGCGTGTT 57.581 42.857 0.00 0.00 0.00 3.32
2953 3039 2.386661 ATGAACCCTCTAGCGTGTTG 57.613 50.000 0.00 0.00 0.00 3.33
2954 3040 0.320421 TGAACCCTCTAGCGTGTTGC 60.320 55.000 0.00 0.00 46.98 4.17
3070 3156 2.019249 CAAGCTGTATGATGGTGGTGG 58.981 52.381 0.00 0.00 0.00 4.61
3072 3158 1.635487 AGCTGTATGATGGTGGTGGTT 59.365 47.619 0.00 0.00 0.00 3.67
3073 3159 2.041620 AGCTGTATGATGGTGGTGGTTT 59.958 45.455 0.00 0.00 0.00 3.27
3074 3160 2.423538 GCTGTATGATGGTGGTGGTTTC 59.576 50.000 0.00 0.00 0.00 2.78
3079 3182 6.249192 TGTATGATGGTGGTGGTTTCAATAA 58.751 36.000 0.00 0.00 0.00 1.40
3133 3243 5.067273 AGTAGTCTAATCTGATCTGGTCCG 58.933 45.833 0.00 0.00 0.00 4.79
3134 3244 3.904717 AGTCTAATCTGATCTGGTCCGT 58.095 45.455 0.00 0.00 0.00 4.69
3141 3262 1.118965 TGATCTGGTCCGTGTGTGGT 61.119 55.000 0.00 0.00 0.00 4.16
3179 3328 0.390492 TGAGAGTGTCACTGCTGTGG 59.610 55.000 21.80 5.52 43.94 4.17
3180 3329 0.320247 GAGAGTGTCACTGCTGTGGG 60.320 60.000 21.80 0.00 43.94 4.61
3181 3330 1.963338 GAGTGTCACTGCTGTGGGC 60.963 63.158 21.80 15.51 43.94 5.36
3182 3331 3.349006 GTGTCACTGCTGTGGGCG 61.349 66.667 21.80 0.00 45.43 6.13
3211 3360 4.694760 TGTAGATCCCTACGCTGTAGTA 57.305 45.455 12.54 3.87 46.37 1.82
3245 3394 3.321497 GGCGGTTGCATTTGTTATTTGA 58.679 40.909 0.00 0.00 45.35 2.69
3285 3440 2.177394 TGATGACGGTTAAGCAAGCA 57.823 45.000 5.38 0.00 32.26 3.91
3320 3475 0.107945 AGATCCAGCGGTGCTTCTTC 60.108 55.000 9.63 1.05 36.40 2.87
3321 3476 0.391661 GATCCAGCGGTGCTTCTTCA 60.392 55.000 9.63 0.00 36.40 3.02
3322 3477 0.392193 ATCCAGCGGTGCTTCTTCAG 60.392 55.000 9.63 0.00 36.40 3.02
3323 3478 1.004560 CCAGCGGTGCTTCTTCAGA 60.005 57.895 9.63 0.00 36.40 3.27
3324 3479 1.294659 CCAGCGGTGCTTCTTCAGAC 61.295 60.000 9.63 0.00 36.40 3.51
3325 3480 0.320247 CAGCGGTGCTTCTTCAGACT 60.320 55.000 0.00 0.00 36.40 3.24
3326 3481 0.037790 AGCGGTGCTTCTTCAGACTC 60.038 55.000 0.00 0.00 33.89 3.36
3327 3482 0.037790 GCGGTGCTTCTTCAGACTCT 60.038 55.000 0.00 0.00 0.00 3.24
3328 3483 1.989430 CGGTGCTTCTTCAGACTCTC 58.011 55.000 0.00 0.00 0.00 3.20
3329 3484 1.543802 CGGTGCTTCTTCAGACTCTCT 59.456 52.381 0.00 0.00 0.00 3.10
3330 3485 2.415357 CGGTGCTTCTTCAGACTCTCTC 60.415 54.545 0.00 0.00 0.00 3.20
3331 3486 2.825532 GGTGCTTCTTCAGACTCTCTCT 59.174 50.000 0.00 0.00 0.00 3.10
3332 3487 3.119495 GGTGCTTCTTCAGACTCTCTCTC 60.119 52.174 0.00 0.00 0.00 3.20
3333 3488 3.758554 GTGCTTCTTCAGACTCTCTCTCT 59.241 47.826 0.00 0.00 0.00 3.10
3334 3489 4.009675 TGCTTCTTCAGACTCTCTCTCTC 58.990 47.826 0.00 0.00 0.00 3.20
3374 3529 2.036604 TCAGCGTGTGTTTCTCATGGTA 59.963 45.455 0.00 0.00 32.43 3.25
3375 3530 2.413112 CAGCGTGTGTTTCTCATGGTAG 59.587 50.000 0.00 0.00 32.43 3.18
3377 3532 3.257375 AGCGTGTGTTTCTCATGGTAGTA 59.743 43.478 0.00 0.00 32.01 1.82
3378 3533 3.991773 GCGTGTGTTTCTCATGGTAGTAA 59.008 43.478 0.00 0.00 0.00 2.24
3379 3534 4.091509 GCGTGTGTTTCTCATGGTAGTAAG 59.908 45.833 0.00 0.00 0.00 2.34
3401 3559 1.739929 CCTCACATGGCGTTGCGTA 60.740 57.895 0.00 0.00 0.00 4.42
3453 3611 3.668447 CATTGAGTACACCTGCTTGACT 58.332 45.455 0.00 0.00 0.00 3.41
3454 3612 2.820059 TGAGTACACCTGCTTGACTG 57.180 50.000 0.00 0.00 0.00 3.51
3455 3613 2.316108 TGAGTACACCTGCTTGACTGA 58.684 47.619 0.00 0.00 0.00 3.41
3457 3615 3.133901 TGAGTACACCTGCTTGACTGAAA 59.866 43.478 0.00 0.00 0.00 2.69
3458 3616 4.202357 TGAGTACACCTGCTTGACTGAAAT 60.202 41.667 0.00 0.00 0.00 2.17
3459 3617 4.067896 AGTACACCTGCTTGACTGAAATG 58.932 43.478 0.00 0.00 0.00 2.32
3461 3619 1.068055 CACCTGCTTGACTGAAATGGC 60.068 52.381 0.00 0.00 0.00 4.40
3462 3620 1.202976 ACCTGCTTGACTGAAATGGCT 60.203 47.619 0.00 0.00 0.00 4.75
3463 3621 2.040278 ACCTGCTTGACTGAAATGGCTA 59.960 45.455 0.00 0.00 0.00 3.93
3473 3640 3.248266 CTGAAATGGCTAAGTGCTTTGC 58.752 45.455 9.28 9.28 42.39 3.68
3484 3651 2.045708 TGCTTTGCCGGTGCTATGG 61.046 57.895 1.90 0.00 38.71 2.74
3490 3657 3.543537 CCGGTGCTATGGCTCTCT 58.456 61.111 1.68 0.00 39.59 3.10
3491 3658 1.826024 CCGGTGCTATGGCTCTCTT 59.174 57.895 1.68 0.00 39.59 2.85
3545 3713 5.748402 AGTTGACTGCTGATTCATTCCATA 58.252 37.500 0.00 0.00 0.00 2.74
3550 3718 7.485810 TGACTGCTGATTCATTCCATAATTTG 58.514 34.615 0.00 0.00 0.00 2.32
3607 3778 4.764823 ACTTTTTGAGGAAATCGGCATACA 59.235 37.500 0.00 0.00 0.00 2.29
3608 3779 4.963276 TTTTGAGGAAATCGGCATACAG 57.037 40.909 0.00 0.00 0.00 2.74
3609 3780 3.627395 TTGAGGAAATCGGCATACAGT 57.373 42.857 0.00 0.00 0.00 3.55
3610 3781 4.746535 TTGAGGAAATCGGCATACAGTA 57.253 40.909 0.00 0.00 0.00 2.74
3611 3782 4.054780 TGAGGAAATCGGCATACAGTAC 57.945 45.455 0.00 0.00 0.00 2.73
3628 3799 4.935808 ACAGTACTGATTTTCGAATGTCCC 59.064 41.667 29.30 0.00 0.00 4.46
3634 3805 5.411669 ACTGATTTTCGAATGTCCCAAGTAC 59.588 40.000 0.00 0.00 0.00 2.73
3635 3806 5.556915 TGATTTTCGAATGTCCCAAGTACT 58.443 37.500 0.00 0.00 0.00 2.73
3690 3893 5.018809 AGGATTGACTATGCACATGGTTTT 58.981 37.500 0.94 0.00 32.42 2.43
3691 3894 5.104374 GGATTGACTATGCACATGGTTTTG 58.896 41.667 0.94 0.00 32.42 2.44
3698 3901 7.812191 TGACTATGCACATGGTTTTGTAAAATC 59.188 33.333 0.94 0.00 32.42 2.17
3703 3906 6.920758 TGCACATGGTTTTGTAAAATCTGTAC 59.079 34.615 0.00 0.00 30.42 2.90
3739 3942 6.757897 ATAAATCGAGCAGGTTTTCATGAA 57.242 33.333 3.38 3.38 34.50 2.57
3750 3953 6.082338 CAGGTTTTCATGAAGATCTTGTTCG 58.918 40.000 14.00 0.00 32.95 3.95
3752 3955 6.073003 AGGTTTTCATGAAGATCTTGTTCGAC 60.073 38.462 14.00 0.00 0.00 4.20
3756 3959 5.482006 TCATGAAGATCTTGTTCGACATGT 58.518 37.500 22.19 0.00 36.46 3.21
3766 3969 6.330278 TCTTGTTCGACATGTTCTATTCGAT 58.670 36.000 0.00 0.00 40.02 3.59
3767 3970 7.477494 TCTTGTTCGACATGTTCTATTCGATA 58.523 34.615 0.00 0.00 40.02 2.92
3768 3971 7.431376 TCTTGTTCGACATGTTCTATTCGATAC 59.569 37.037 0.00 5.51 40.02 2.24
3769 3972 6.792326 TGTTCGACATGTTCTATTCGATACT 58.208 36.000 0.00 0.00 40.02 2.12
3770 3973 6.691388 TGTTCGACATGTTCTATTCGATACTG 59.309 38.462 0.00 0.00 40.02 2.74
3771 3974 6.613755 TCGACATGTTCTATTCGATACTGA 57.386 37.500 0.00 0.00 35.64 3.41
3772 3975 7.203255 TCGACATGTTCTATTCGATACTGAT 57.797 36.000 0.00 0.00 35.64 2.90
3773 3976 8.319143 TCGACATGTTCTATTCGATACTGATA 57.681 34.615 0.00 0.00 35.64 2.15
3774 3977 8.443937 TCGACATGTTCTATTCGATACTGATAG 58.556 37.037 0.00 0.00 35.64 2.08
3775 3978 7.694367 CGACATGTTCTATTCGATACTGATAGG 59.306 40.741 0.00 0.00 33.20 2.57
3776 3979 8.637196 ACATGTTCTATTCGATACTGATAGGA 57.363 34.615 0.00 0.00 0.00 2.94
3777 3980 8.735315 ACATGTTCTATTCGATACTGATAGGAG 58.265 37.037 0.00 0.00 0.00 3.69
3778 3981 8.951243 CATGTTCTATTCGATACTGATAGGAGA 58.049 37.037 2.14 0.00 0.00 3.71
3779 3982 8.919777 TGTTCTATTCGATACTGATAGGAGAA 57.080 34.615 2.14 0.00 0.00 2.87
3780 3983 8.784994 TGTTCTATTCGATACTGATAGGAGAAC 58.215 37.037 0.00 0.00 39.51 3.01
3781 3984 9.005777 GTTCTATTCGATACTGATAGGAGAACT 57.994 37.037 0.00 0.00 37.28 3.01
3782 3985 9.575868 TTCTATTCGATACTGATAGGAGAACTT 57.424 33.333 2.14 0.00 0.00 2.66
3783 3986 9.004717 TCTATTCGATACTGATAGGAGAACTTG 57.995 37.037 2.14 0.00 0.00 3.16
3784 3987 7.825331 ATTCGATACTGATAGGAGAACTTGA 57.175 36.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 100 3.114809 CAACAGAAGCACGCAAATTTCA 58.885 40.909 0.00 0.00 0.00 2.69
114 119 1.079819 GTGCGGAGAGTAGCAGCAA 60.080 57.895 0.00 0.00 44.70 3.91
128 133 2.423064 GGCCCCCTAATTTGGTGCG 61.423 63.158 5.19 0.00 0.00 5.34
281 290 0.179189 CGAGGCGAGAAACAAATGGC 60.179 55.000 0.00 0.00 0.00 4.40
303 319 2.820400 TTTCAGGGGAAACGGGCGA 61.820 57.895 0.00 0.00 38.07 5.54
304 320 2.281900 TTTCAGGGGAAACGGGCG 60.282 61.111 0.00 0.00 38.07 6.13
364 380 1.741401 CGCATCGGTCACACATGGT 60.741 57.895 0.00 0.00 0.00 3.55
373 389 0.447801 AACAAAGCATCGCATCGGTC 59.552 50.000 0.00 0.00 0.00 4.79
409 430 0.821711 TCCTTTCCCACGCACCTTTG 60.822 55.000 0.00 0.00 0.00 2.77
410 431 0.537371 CTCCTTTCCCACGCACCTTT 60.537 55.000 0.00 0.00 0.00 3.11
411 432 1.073199 CTCCTTTCCCACGCACCTT 59.927 57.895 0.00 0.00 0.00 3.50
412 433 2.750350 CTCCTTTCCCACGCACCT 59.250 61.111 0.00 0.00 0.00 4.00
413 434 1.833787 TACCTCCTTTCCCACGCACC 61.834 60.000 0.00 0.00 0.00 5.01
421 442 1.954035 ACCCACTCTACCTCCTTTCC 58.046 55.000 0.00 0.00 0.00 3.13
482 506 0.031857 CACGCAAAGCCCACAAATCA 59.968 50.000 0.00 0.00 0.00 2.57
489 513 0.036732 AGAGAATCACGCAAAGCCCA 59.963 50.000 0.00 0.00 37.82 5.36
616 642 4.263331 GGAGATACCACCAAAGTCCAAAGA 60.263 45.833 0.00 0.00 38.79 2.52
634 660 4.596643 ACAAGGATAGCAATGCTAGGAGAT 59.403 41.667 20.25 4.05 44.66 2.75
642 668 3.855689 AACACACAAGGATAGCAATGC 57.144 42.857 0.00 0.00 0.00 3.56
648 674 6.037172 GCCATGTAACTAACACACAAGGATAG 59.963 42.308 0.00 0.00 42.09 2.08
689 720 1.153449 CCTCGCCTAATCGCCACAA 60.153 57.895 0.00 0.00 0.00 3.33
693 724 0.876342 CTGAACCTCGCCTAATCGCC 60.876 60.000 0.00 0.00 0.00 5.54
727 758 1.407618 GCCGGAATTACCAAACCATCC 59.592 52.381 5.05 0.00 38.90 3.51
744 775 1.026718 ATTCAAGCCTTTCTCCGCCG 61.027 55.000 0.00 0.00 0.00 6.46
819 851 1.880027 CCACAAGTTAGGTCAGTTGGC 59.120 52.381 0.00 0.00 32.15 4.52
848 880 2.735772 CCTGCCTACCTGCACGGAT 61.736 63.158 8.91 0.00 36.04 4.18
935 967 1.672356 CTGGCTCCCACTTTGACCG 60.672 63.158 0.00 0.00 0.00 4.79
990 1022 0.322816 TGGCTTCCATCAGAACTGGC 60.323 55.000 1.93 0.00 33.56 4.85
1254 1286 1.142688 AACTGTCCAGGAGGCCCATT 61.143 55.000 0.00 0.00 33.88 3.16
1255 1287 1.542375 AACTGTCCAGGAGGCCCAT 60.542 57.895 0.00 0.00 33.88 4.00
1524 1556 3.644966 TTTGGTATACCTTGCCAGAGG 57.355 47.619 22.41 0.00 41.54 3.69
1569 1628 8.736244 CATAATGGCATGACAAATATGAGATGA 58.264 33.333 23.70 0.00 31.33 2.92
1570 1629 7.973944 CCATAATGGCATGACAAATATGAGATG 59.026 37.037 27.22 14.09 31.33 2.90
1582 1641 5.581126 TTGTTCTTCCATAATGGCATGAC 57.419 39.130 0.00 0.00 37.47 3.06
1586 1645 9.365906 ACATATATTTGTTCTTCCATAATGGCA 57.634 29.630 0.00 0.00 37.47 4.92
1616 1679 7.390718 GGACTAAGAAAGGTTCTGCTTCATTTA 59.609 37.037 0.00 0.00 40.59 1.40
1627 1690 6.759356 GCTAATCTCAGGACTAAGAAAGGTTC 59.241 42.308 0.00 0.00 0.00 3.62
1638 1701 5.489792 TTGACAAAGCTAATCTCAGGACT 57.510 39.130 0.00 0.00 0.00 3.85
1651 1714 5.291614 TCAAGAAACTTGCATTTGACAAAGC 59.708 36.000 6.77 10.29 0.00 3.51
1672 1735 9.423061 CGGTTATCAGTATCATTGTATCATCAA 57.577 33.333 0.00 0.00 0.00 2.57
1673 1736 7.545615 GCGGTTATCAGTATCATTGTATCATCA 59.454 37.037 0.00 0.00 0.00 3.07
1674 1737 7.010552 GGCGGTTATCAGTATCATTGTATCATC 59.989 40.741 0.00 0.00 0.00 2.92
1675 1738 6.818644 GGCGGTTATCAGTATCATTGTATCAT 59.181 38.462 0.00 0.00 0.00 2.45
1681 1744 3.649073 TCGGCGGTTATCAGTATCATTG 58.351 45.455 7.21 0.00 0.00 2.82
1682 1745 4.245660 CATCGGCGGTTATCAGTATCATT 58.754 43.478 7.21 0.00 0.00 2.57
1683 1746 3.849911 CATCGGCGGTTATCAGTATCAT 58.150 45.455 7.21 0.00 0.00 2.45
1684 1747 2.609491 GCATCGGCGGTTATCAGTATCA 60.609 50.000 7.21 0.00 0.00 2.15
1685 1748 1.993370 GCATCGGCGGTTATCAGTATC 59.007 52.381 7.21 0.00 0.00 2.24
1686 1749 1.343142 TGCATCGGCGGTTATCAGTAT 59.657 47.619 7.21 0.00 45.35 2.12
1687 1750 0.747852 TGCATCGGCGGTTATCAGTA 59.252 50.000 7.21 0.00 45.35 2.74
1688 1751 0.107897 TTGCATCGGCGGTTATCAGT 60.108 50.000 7.21 0.00 45.35 3.41
1689 1752 0.583438 CTTGCATCGGCGGTTATCAG 59.417 55.000 7.21 0.00 45.35 2.90
1690 1753 0.107897 ACTTGCATCGGCGGTTATCA 60.108 50.000 7.21 0.00 45.35 2.15
1691 1754 1.014352 AACTTGCATCGGCGGTTATC 58.986 50.000 7.21 0.00 45.35 1.75
1692 1755 2.319136 TAACTTGCATCGGCGGTTAT 57.681 45.000 7.21 0.00 45.35 1.89
1693 1756 1.733360 GTTAACTTGCATCGGCGGTTA 59.267 47.619 7.21 3.42 45.35 2.85
1694 1757 0.519961 GTTAACTTGCATCGGCGGTT 59.480 50.000 7.21 4.51 45.35 4.44
1695 1758 0.321298 AGTTAACTTGCATCGGCGGT 60.321 50.000 7.21 0.00 45.35 5.68
1696 1759 0.802494 AAGTTAACTTGCATCGGCGG 59.198 50.000 19.94 0.00 45.35 6.13
1697 1760 2.241722 CAAAGTTAACTTGCATCGGCG 58.758 47.619 21.22 0.00 45.35 6.46
1698 1761 3.282831 ACAAAGTTAACTTGCATCGGC 57.717 42.857 21.22 0.00 36.12 5.54
1699 1762 7.303634 AGTATACAAAGTTAACTTGCATCGG 57.696 36.000 21.22 9.49 36.12 4.18
1725 1788 8.196771 GCCCAAGATTTGACATGATTAATTGTA 58.803 33.333 0.00 0.00 0.00 2.41
1738 1801 3.620488 TCCTATGTGCCCAAGATTTGAC 58.380 45.455 0.00 0.00 0.00 3.18
1748 1811 2.373169 TCCAGATTCATCCTATGTGCCC 59.627 50.000 0.00 0.00 0.00 5.36
1751 1814 7.387122 CAGTATTGTCCAGATTCATCCTATGTG 59.613 40.741 0.00 0.00 0.00 3.21
1758 1821 9.553064 AGAATAACAGTATTGTCCAGATTCATC 57.447 33.333 13.09 0.00 36.23 2.92
1803 1866 6.264292 TGCTTAATAAGTCTGGCTGTTCAAAA 59.736 34.615 1.68 0.00 0.00 2.44
1807 1870 5.880054 TTGCTTAATAAGTCTGGCTGTTC 57.120 39.130 1.68 0.00 0.00 3.18
1817 1880 7.094631 TGTGTACAGTCGATTGCTTAATAAGT 58.905 34.615 7.97 0.00 0.00 2.24
1818 1881 7.520119 TGTGTACAGTCGATTGCTTAATAAG 57.480 36.000 7.97 0.00 0.00 1.73
1825 1888 5.262588 TGATATGTGTACAGTCGATTGCT 57.737 39.130 7.97 0.00 0.00 3.91
1826 1889 5.966636 TTGATATGTGTACAGTCGATTGC 57.033 39.130 7.97 0.00 0.00 3.56
1827 1890 7.525688 AGTTTGATATGTGTACAGTCGATTG 57.474 36.000 6.35 6.35 0.00 2.67
1829 1892 8.443160 CAAAAGTTTGATATGTGTACAGTCGAT 58.557 33.333 0.00 0.00 40.55 3.59
1830 1893 7.439955 ACAAAAGTTTGATATGTGTACAGTCGA 59.560 33.333 10.66 0.00 40.55 4.20
1831 1894 7.572759 ACAAAAGTTTGATATGTGTACAGTCG 58.427 34.615 10.66 0.00 40.55 4.18
1832 1895 9.730420 AAACAAAAGTTTGATATGTGTACAGTC 57.270 29.630 10.66 0.00 40.55 3.51
1867 1937 9.555727 GCAAGGACATGGTAAGAAACTATAATA 57.444 33.333 0.00 0.00 0.00 0.98
1932 2005 7.277098 TCCGCAACTATGTCTAAACTAAACATC 59.723 37.037 0.00 0.00 35.38 3.06
2030 2105 8.339714 TCTTAACAAACAGTTAACAGTATGCAC 58.660 33.333 8.61 0.00 45.28 4.57
2032 2107 7.534239 GCTCTTAACAAACAGTTAACAGTATGC 59.466 37.037 8.61 0.00 45.28 3.14
2052 2127 8.430573 TGGCTATACTATTAACCATGCTCTTA 57.569 34.615 0.00 0.00 0.00 2.10
2053 2128 7.316393 TGGCTATACTATTAACCATGCTCTT 57.684 36.000 0.00 0.00 0.00 2.85
2054 2129 6.575254 GCTGGCTATACTATTAACCATGCTCT 60.575 42.308 0.00 0.00 0.00 4.09
2055 2130 5.582665 GCTGGCTATACTATTAACCATGCTC 59.417 44.000 0.00 0.00 0.00 4.26
2056 2131 5.249393 AGCTGGCTATACTATTAACCATGCT 59.751 40.000 0.00 0.00 31.38 3.79
2057 2132 5.352569 CAGCTGGCTATACTATTAACCATGC 59.647 44.000 5.57 0.00 0.00 4.06
2058 2133 5.352569 GCAGCTGGCTATACTATTAACCATG 59.647 44.000 17.12 0.00 40.25 3.66
2059 2134 5.491982 GCAGCTGGCTATACTATTAACCAT 58.508 41.667 17.12 0.00 40.25 3.55
2060 2135 4.894784 GCAGCTGGCTATACTATTAACCA 58.105 43.478 17.12 0.00 40.25 3.67
2085 2160 1.876156 GACATGGCACTGGCTTATAGC 59.124 52.381 3.97 0.00 41.46 2.97
2086 2161 3.198409 TGACATGGCACTGGCTTATAG 57.802 47.619 0.00 0.00 40.87 1.31
2087 2162 3.392285 AGATGACATGGCACTGGCTTATA 59.608 43.478 1.45 0.00 40.87 0.98
2088 2163 2.174210 AGATGACATGGCACTGGCTTAT 59.826 45.455 1.45 0.00 40.87 1.73
2089 2164 1.561076 AGATGACATGGCACTGGCTTA 59.439 47.619 1.45 0.00 40.87 3.09
2090 2165 0.330604 AGATGACATGGCACTGGCTT 59.669 50.000 1.45 0.00 40.87 4.35
2091 2166 1.134280 GTAGATGACATGGCACTGGCT 60.134 52.381 1.45 1.41 40.87 4.75
2092 2167 1.303309 GTAGATGACATGGCACTGGC 58.697 55.000 1.45 0.00 40.13 4.85
2093 2168 2.679837 GTTGTAGATGACATGGCACTGG 59.320 50.000 1.45 0.00 38.07 4.00
2094 2169 2.679837 GGTTGTAGATGACATGGCACTG 59.320 50.000 1.45 0.00 38.07 3.66
2095 2170 2.356125 GGGTTGTAGATGACATGGCACT 60.356 50.000 1.45 6.11 38.07 4.40
2096 2171 2.017049 GGGTTGTAGATGACATGGCAC 58.983 52.381 1.45 0.00 38.07 5.01
2097 2172 1.632920 TGGGTTGTAGATGACATGGCA 59.367 47.619 2.18 2.18 38.07 4.92
2098 2173 2.418368 TGGGTTGTAGATGACATGGC 57.582 50.000 0.00 0.00 38.07 4.40
2099 2174 4.428294 AGATGGGTTGTAGATGACATGG 57.572 45.455 0.00 0.00 38.07 3.66
2100 2175 7.332926 GCTATAAGATGGGTTGTAGATGACATG 59.667 40.741 0.00 0.00 38.07 3.21
2101 2176 7.390027 GCTATAAGATGGGTTGTAGATGACAT 58.610 38.462 0.00 0.00 38.07 3.06
2102 2177 6.239600 GGCTATAAGATGGGTTGTAGATGACA 60.240 42.308 0.00 0.00 35.78 3.58
2103 2178 6.166982 GGCTATAAGATGGGTTGTAGATGAC 58.833 44.000 0.00 0.00 0.00 3.06
2104 2179 5.843969 TGGCTATAAGATGGGTTGTAGATGA 59.156 40.000 0.00 0.00 0.00 2.92
2105 2180 6.114187 TGGCTATAAGATGGGTTGTAGATG 57.886 41.667 0.00 0.00 0.00 2.90
2106 2181 6.101150 TGTTGGCTATAAGATGGGTTGTAGAT 59.899 38.462 0.00 0.00 0.00 1.98
2107 2182 5.427157 TGTTGGCTATAAGATGGGTTGTAGA 59.573 40.000 0.00 0.00 0.00 2.59
2108 2183 5.680619 TGTTGGCTATAAGATGGGTTGTAG 58.319 41.667 0.00 0.00 0.00 2.74
2109 2184 5.702065 TGTTGGCTATAAGATGGGTTGTA 57.298 39.130 0.00 0.00 0.00 2.41
2110 2185 4.584638 TGTTGGCTATAAGATGGGTTGT 57.415 40.909 0.00 0.00 0.00 3.32
2111 2186 4.889409 ACATGTTGGCTATAAGATGGGTTG 59.111 41.667 0.00 0.00 36.09 3.77
2112 2187 5.129368 ACATGTTGGCTATAAGATGGGTT 57.871 39.130 0.00 0.00 36.09 4.11
2113 2188 4.796110 ACATGTTGGCTATAAGATGGGT 57.204 40.909 0.00 0.00 36.09 4.51
2143 2218 9.832445 TGAAAAAGTAGTACACTCTTTTGATCT 57.168 29.630 17.04 7.25 39.99 2.75
2151 2226 9.436957 CCACATAATGAAAAAGTAGTACACTCT 57.563 33.333 2.52 0.00 36.04 3.24
2152 2227 8.175716 GCCACATAATGAAAAAGTAGTACACTC 58.824 37.037 2.52 0.00 36.04 3.51
2153 2228 7.120726 GGCCACATAATGAAAAAGTAGTACACT 59.879 37.037 0.00 0.00 40.05 3.55
2154 2229 7.248437 GGCCACATAATGAAAAAGTAGTACAC 58.752 38.462 0.00 0.00 0.00 2.90
2155 2230 6.376018 GGGCCACATAATGAAAAAGTAGTACA 59.624 38.462 4.39 0.00 0.00 2.90
2156 2231 6.376018 TGGGCCACATAATGAAAAAGTAGTAC 59.624 38.462 0.00 0.00 0.00 2.73
2157 2232 6.486056 TGGGCCACATAATGAAAAAGTAGTA 58.514 36.000 0.00 0.00 0.00 1.82
2158 2233 5.329399 TGGGCCACATAATGAAAAAGTAGT 58.671 37.500 0.00 0.00 0.00 2.73
2159 2234 5.913137 TGGGCCACATAATGAAAAAGTAG 57.087 39.130 0.00 0.00 0.00 2.57
2160 2235 6.194235 AGATGGGCCACATAATGAAAAAGTA 58.806 36.000 9.28 0.00 40.72 2.24
2161 2236 5.025453 AGATGGGCCACATAATGAAAAAGT 58.975 37.500 9.28 0.00 40.72 2.66
2162 2237 5.603170 AGATGGGCCACATAATGAAAAAG 57.397 39.130 9.28 0.00 40.72 2.27
2163 2238 6.013898 TGAAAGATGGGCCACATAATGAAAAA 60.014 34.615 9.28 0.00 40.72 1.94
2164 2239 5.483231 TGAAAGATGGGCCACATAATGAAAA 59.517 36.000 9.28 0.00 40.72 2.29
2165 2240 5.022122 TGAAAGATGGGCCACATAATGAAA 58.978 37.500 9.28 0.00 40.72 2.69
2166 2241 4.608269 TGAAAGATGGGCCACATAATGAA 58.392 39.130 9.28 0.00 40.72 2.57
2167 2242 4.248174 TGAAAGATGGGCCACATAATGA 57.752 40.909 9.28 0.00 40.72 2.57
2168 2243 5.303589 AGAATGAAAGATGGGCCACATAATG 59.696 40.000 9.28 0.00 40.72 1.90
2169 2244 5.461327 AGAATGAAAGATGGGCCACATAAT 58.539 37.500 9.28 0.00 40.72 1.28
2170 2245 4.870636 AGAATGAAAGATGGGCCACATAA 58.129 39.130 9.28 0.00 40.72 1.90
2171 2246 4.464008 GAGAATGAAAGATGGGCCACATA 58.536 43.478 9.28 0.00 40.72 2.29
2172 2247 3.294214 GAGAATGAAAGATGGGCCACAT 58.706 45.455 9.28 4.20 44.18 3.21
2173 2248 2.726821 GAGAATGAAAGATGGGCCACA 58.273 47.619 9.28 1.19 0.00 4.17
2174 2249 1.672881 CGAGAATGAAAGATGGGCCAC 59.327 52.381 9.28 2.67 0.00 5.01
2175 2250 2.018644 GCGAGAATGAAAGATGGGCCA 61.019 52.381 9.61 9.61 0.00 5.36
2176 2251 0.665298 GCGAGAATGAAAGATGGGCC 59.335 55.000 0.00 0.00 0.00 5.80
2177 2252 1.382522 TGCGAGAATGAAAGATGGGC 58.617 50.000 0.00 0.00 0.00 5.36
2178 2253 3.441572 ACTTTGCGAGAATGAAAGATGGG 59.558 43.478 0.00 0.00 32.18 4.00
2179 2254 4.409570 CACTTTGCGAGAATGAAAGATGG 58.590 43.478 0.00 0.00 32.18 3.51
2180 2255 3.850273 GCACTTTGCGAGAATGAAAGATG 59.150 43.478 0.00 0.00 31.71 2.90
2181 2256 3.119708 GGCACTTTGCGAGAATGAAAGAT 60.120 43.478 0.00 0.00 46.21 2.40
2182 2257 2.226437 GGCACTTTGCGAGAATGAAAGA 59.774 45.455 0.00 0.00 46.21 2.52
2183 2258 2.227388 AGGCACTTTGCGAGAATGAAAG 59.773 45.455 0.00 0.00 46.21 2.62
2184 2259 2.229792 AGGCACTTTGCGAGAATGAAA 58.770 42.857 0.00 0.00 46.21 2.69
2185 2260 1.896220 AGGCACTTTGCGAGAATGAA 58.104 45.000 0.00 0.00 46.21 2.57
2186 2261 2.621338 CTAGGCACTTTGCGAGAATGA 58.379 47.619 0.00 0.00 46.21 2.57
2187 2262 1.667724 CCTAGGCACTTTGCGAGAATG 59.332 52.381 0.00 0.00 46.21 2.67
2188 2263 1.555075 TCCTAGGCACTTTGCGAGAAT 59.445 47.619 2.96 0.00 46.21 2.40
2189 2264 0.973632 TCCTAGGCACTTTGCGAGAA 59.026 50.000 2.96 0.00 46.21 2.87
2190 2265 0.532573 CTCCTAGGCACTTTGCGAGA 59.467 55.000 2.96 0.00 46.21 4.04
2191 2266 1.086634 GCTCCTAGGCACTTTGCGAG 61.087 60.000 2.96 0.00 46.21 5.03
2192 2267 1.079127 GCTCCTAGGCACTTTGCGA 60.079 57.895 2.96 0.00 46.21 5.10
2193 2268 1.375908 TGCTCCTAGGCACTTTGCG 60.376 57.895 2.96 0.00 46.21 4.85
2194 2269 4.722193 TGCTCCTAGGCACTTTGC 57.278 55.556 2.96 2.12 44.08 3.68
2209 2284 3.191539 GCCAGCTCTAGCACGTGC 61.192 66.667 32.79 32.79 45.16 5.34
2210 2285 1.518133 GAGCCAGCTCTAGCACGTG 60.518 63.158 12.28 12.28 45.16 4.49
2211 2286 2.888863 GAGCCAGCTCTAGCACGT 59.111 61.111 12.42 0.00 45.16 4.49
2219 2294 0.244994 TCTTCGTGAAGAGCCAGCTC 59.755 55.000 11.78 11.78 42.06 4.09
2220 2295 2.355946 TCTTCGTGAAGAGCCAGCT 58.644 52.632 8.19 0.00 42.06 4.24
2221 2296 4.996976 TCTTCGTGAAGAGCCAGC 57.003 55.556 8.19 0.00 42.06 4.85
2227 2302 1.816863 AAGCGGGCTCTTCGTGAAGA 61.817 55.000 11.54 11.54 44.47 2.87
2228 2303 0.108804 TAAGCGGGCTCTTCGTGAAG 60.109 55.000 3.17 3.17 39.71 3.02
2229 2304 0.535335 ATAAGCGGGCTCTTCGTGAA 59.465 50.000 0.00 0.00 0.00 3.18
2230 2305 0.102481 GATAAGCGGGCTCTTCGTGA 59.898 55.000 0.00 0.00 0.00 4.35
2231 2306 0.103208 AGATAAGCGGGCTCTTCGTG 59.897 55.000 0.00 0.00 0.00 4.35
2232 2307 0.824759 AAGATAAGCGGGCTCTTCGT 59.175 50.000 0.00 0.00 0.00 3.85
2233 2308 1.067821 AGAAGATAAGCGGGCTCTTCG 59.932 52.381 12.57 0.00 46.06 3.79
2234 2309 2.364002 AGAGAAGATAAGCGGGCTCTTC 59.636 50.000 11.19 11.19 43.30 2.87
2235 2310 2.364002 GAGAGAAGATAAGCGGGCTCTT 59.636 50.000 0.00 0.00 33.26 2.85
2236 2311 1.960689 GAGAGAAGATAAGCGGGCTCT 59.039 52.381 0.00 0.00 35.59 4.09
2237 2312 1.960689 AGAGAGAAGATAAGCGGGCTC 59.039 52.381 0.00 0.00 0.00 4.70
2238 2313 1.960689 GAGAGAGAAGATAAGCGGGCT 59.039 52.381 0.00 0.00 0.00 5.19
2239 2314 1.000394 GGAGAGAGAAGATAAGCGGGC 60.000 57.143 0.00 0.00 0.00 6.13
2240 2315 2.556622 GAGGAGAGAGAAGATAAGCGGG 59.443 54.545 0.00 0.00 0.00 6.13
2241 2316 3.486383 AGAGGAGAGAGAAGATAAGCGG 58.514 50.000 0.00 0.00 0.00 5.52
2242 2317 4.821805 AGAAGAGGAGAGAGAAGATAAGCG 59.178 45.833 0.00 0.00 0.00 4.68
2243 2318 6.064717 AGAGAAGAGGAGAGAGAAGATAAGC 58.935 44.000 0.00 0.00 0.00 3.09
2244 2319 8.525290 AAAGAGAAGAGGAGAGAGAAGATAAG 57.475 38.462 0.00 0.00 0.00 1.73
2245 2320 7.559897 GGAAAGAGAAGAGGAGAGAGAAGATAA 59.440 40.741 0.00 0.00 0.00 1.75
2246 2321 7.060421 GGAAAGAGAAGAGGAGAGAGAAGATA 58.940 42.308 0.00 0.00 0.00 1.98
2247 2322 5.893824 GGAAAGAGAAGAGGAGAGAGAAGAT 59.106 44.000 0.00 0.00 0.00 2.40
2248 2323 5.015178 AGGAAAGAGAAGAGGAGAGAGAAGA 59.985 44.000 0.00 0.00 0.00 2.87
2249 2324 5.264395 AGGAAAGAGAAGAGGAGAGAGAAG 58.736 45.833 0.00 0.00 0.00 2.85
2250 2325 5.261216 GAGGAAAGAGAAGAGGAGAGAGAA 58.739 45.833 0.00 0.00 0.00 2.87
2251 2326 4.325030 GGAGGAAAGAGAAGAGGAGAGAGA 60.325 50.000 0.00 0.00 0.00 3.10
2252 2327 3.954258 GGAGGAAAGAGAAGAGGAGAGAG 59.046 52.174 0.00 0.00 0.00 3.20
2253 2328 3.335183 TGGAGGAAAGAGAAGAGGAGAGA 59.665 47.826 0.00 0.00 0.00 3.10
2254 2329 3.707316 TGGAGGAAAGAGAAGAGGAGAG 58.293 50.000 0.00 0.00 0.00 3.20
2255 2330 3.835395 GTTGGAGGAAAGAGAAGAGGAGA 59.165 47.826 0.00 0.00 0.00 3.71
2256 2331 3.837731 AGTTGGAGGAAAGAGAAGAGGAG 59.162 47.826 0.00 0.00 0.00 3.69
2257 2332 3.863086 AGTTGGAGGAAAGAGAAGAGGA 58.137 45.455 0.00 0.00 0.00 3.71
2258 2333 5.729510 CTTAGTTGGAGGAAAGAGAAGAGG 58.270 45.833 0.00 0.00 0.00 3.69
2259 2334 5.175127 GCTTAGTTGGAGGAAAGAGAAGAG 58.825 45.833 0.00 0.00 0.00 2.85
2260 2335 4.593206 TGCTTAGTTGGAGGAAAGAGAAGA 59.407 41.667 0.00 0.00 0.00 2.87
2261 2336 4.899502 TGCTTAGTTGGAGGAAAGAGAAG 58.100 43.478 0.00 0.00 0.00 2.85
2262 2337 4.974645 TGCTTAGTTGGAGGAAAGAGAA 57.025 40.909 0.00 0.00 0.00 2.87
2263 2338 4.974645 TTGCTTAGTTGGAGGAAAGAGA 57.025 40.909 0.00 0.00 0.00 3.10
2264 2339 6.391227 TTTTTGCTTAGTTGGAGGAAAGAG 57.609 37.500 0.00 0.00 36.14 2.85
2265 2340 6.976934 ATTTTTGCTTAGTTGGAGGAAAGA 57.023 33.333 0.00 0.00 36.14 2.52
2266 2341 9.788960 GTATATTTTTGCTTAGTTGGAGGAAAG 57.211 33.333 0.00 0.00 36.14 2.62
2267 2342 9.528489 AGTATATTTTTGCTTAGTTGGAGGAAA 57.472 29.630 0.00 0.00 33.47 3.13
2269 2344 9.832445 CTAGTATATTTTTGCTTAGTTGGAGGA 57.168 33.333 0.00 0.00 0.00 3.71
2270 2345 9.614792 ACTAGTATATTTTTGCTTAGTTGGAGG 57.385 33.333 0.00 0.00 0.00 4.30
2289 2364 9.273137 AGCAGGCTATATGGAATAAACTAGTAT 57.727 33.333 0.00 0.00 29.06 2.12
2290 2365 8.531982 CAGCAGGCTATATGGAATAAACTAGTA 58.468 37.037 0.00 0.00 29.06 1.82
2291 2366 7.235606 TCAGCAGGCTATATGGAATAAACTAGT 59.764 37.037 0.00 0.00 29.06 2.57
2292 2367 7.547370 GTCAGCAGGCTATATGGAATAAACTAG 59.453 40.741 0.00 0.00 29.06 2.57
2293 2368 7.235606 AGTCAGCAGGCTATATGGAATAAACTA 59.764 37.037 0.00 0.00 29.06 2.24
2294 2369 6.043706 AGTCAGCAGGCTATATGGAATAAACT 59.956 38.462 0.00 0.00 29.06 2.66
2295 2370 6.234177 AGTCAGCAGGCTATATGGAATAAAC 58.766 40.000 0.00 0.00 29.06 2.01
2296 2371 6.043127 TGAGTCAGCAGGCTATATGGAATAAA 59.957 38.462 0.00 0.00 29.06 1.40
2297 2372 5.543790 TGAGTCAGCAGGCTATATGGAATAA 59.456 40.000 0.00 0.00 29.06 1.40
2298 2373 5.086621 TGAGTCAGCAGGCTATATGGAATA 58.913 41.667 0.00 0.00 0.00 1.75
2299 2374 3.906218 TGAGTCAGCAGGCTATATGGAAT 59.094 43.478 0.00 0.00 0.00 3.01
2300 2375 3.308401 TGAGTCAGCAGGCTATATGGAA 58.692 45.455 0.00 0.00 0.00 3.53
2301 2376 2.962859 TGAGTCAGCAGGCTATATGGA 58.037 47.619 0.00 0.00 0.00 3.41
2302 2377 3.514706 AGATGAGTCAGCAGGCTATATGG 59.485 47.826 11.60 0.00 0.00 2.74
2303 2378 4.021280 ACAGATGAGTCAGCAGGCTATATG 60.021 45.833 11.60 0.00 0.00 1.78
2304 2379 4.158786 ACAGATGAGTCAGCAGGCTATAT 58.841 43.478 11.60 0.00 0.00 0.86
2305 2380 3.570540 ACAGATGAGTCAGCAGGCTATA 58.429 45.455 11.60 0.00 0.00 1.31
2306 2381 2.396608 ACAGATGAGTCAGCAGGCTAT 58.603 47.619 11.60 0.00 0.00 2.97
2307 2382 1.857965 ACAGATGAGTCAGCAGGCTA 58.142 50.000 11.60 0.00 0.00 3.93
2308 2383 1.857965 TACAGATGAGTCAGCAGGCT 58.142 50.000 11.60 0.00 0.00 4.58
2309 2384 2.906691 ATACAGATGAGTCAGCAGGC 57.093 50.000 11.60 0.00 0.00 4.85
2310 2385 7.225784 AGTATAATACAGATGAGTCAGCAGG 57.774 40.000 11.60 4.86 0.00 4.85
2311 2386 7.116090 GCAAGTATAATACAGATGAGTCAGCAG 59.884 40.741 11.60 5.06 0.00 4.24
2312 2387 6.925718 GCAAGTATAATACAGATGAGTCAGCA 59.074 38.462 11.60 0.00 0.00 4.41
2313 2388 7.151308 AGCAAGTATAATACAGATGAGTCAGC 58.849 38.462 0.00 0.00 0.00 4.26
2314 2389 8.575589 AGAGCAAGTATAATACAGATGAGTCAG 58.424 37.037 0.00 0.00 0.00 3.51
2315 2390 8.470657 AGAGCAAGTATAATACAGATGAGTCA 57.529 34.615 0.00 0.00 0.00 3.41
2318 2393 9.352784 GCTTAGAGCAAGTATAATACAGATGAG 57.647 37.037 0.00 0.00 41.89 2.90
2319 2394 8.307483 GGCTTAGAGCAAGTATAATACAGATGA 58.693 37.037 2.04 0.00 44.75 2.92
2320 2395 8.090831 TGGCTTAGAGCAAGTATAATACAGATG 58.909 37.037 2.04 0.00 44.75 2.90
2321 2396 8.195165 TGGCTTAGAGCAAGTATAATACAGAT 57.805 34.615 2.04 0.00 44.75 2.90
2322 2397 7.597288 TGGCTTAGAGCAAGTATAATACAGA 57.403 36.000 2.04 0.00 44.75 3.41
2323 2398 7.875041 ACATGGCTTAGAGCAAGTATAATACAG 59.125 37.037 0.00 0.00 44.75 2.74
2324 2399 7.735917 ACATGGCTTAGAGCAAGTATAATACA 58.264 34.615 0.00 0.00 44.75 2.29
2325 2400 8.499162 CAACATGGCTTAGAGCAAGTATAATAC 58.501 37.037 0.00 0.00 44.75 1.89
2326 2401 8.210946 ACAACATGGCTTAGAGCAAGTATAATA 58.789 33.333 0.00 0.00 44.75 0.98
2327 2402 7.056635 ACAACATGGCTTAGAGCAAGTATAAT 58.943 34.615 0.00 0.00 44.75 1.28
2328 2403 6.414732 ACAACATGGCTTAGAGCAAGTATAA 58.585 36.000 0.00 0.00 44.75 0.98
2329 2404 5.989477 ACAACATGGCTTAGAGCAAGTATA 58.011 37.500 0.00 0.00 44.75 1.47
2330 2405 4.848357 ACAACATGGCTTAGAGCAAGTAT 58.152 39.130 0.00 0.00 44.75 2.12
2331 2406 4.286297 ACAACATGGCTTAGAGCAAGTA 57.714 40.909 0.00 0.00 44.75 2.24
2332 2407 3.146104 ACAACATGGCTTAGAGCAAGT 57.854 42.857 0.00 0.00 44.75 3.16
2333 2408 3.503363 TGAACAACATGGCTTAGAGCAAG 59.497 43.478 0.00 0.00 44.75 4.01
2334 2409 3.485394 TGAACAACATGGCTTAGAGCAA 58.515 40.909 0.00 0.00 44.75 3.91
2335 2410 3.138884 TGAACAACATGGCTTAGAGCA 57.861 42.857 0.00 0.00 44.75 4.26
2336 2411 4.503741 TTTGAACAACATGGCTTAGAGC 57.496 40.909 0.00 0.00 41.46 4.09
2337 2412 5.403466 GCTTTTTGAACAACATGGCTTAGAG 59.597 40.000 0.00 0.00 0.00 2.43
2338 2413 5.288804 GCTTTTTGAACAACATGGCTTAGA 58.711 37.500 0.00 0.00 0.00 2.10
2339 2414 4.448732 GGCTTTTTGAACAACATGGCTTAG 59.551 41.667 0.00 0.00 0.00 2.18
2408 2483 3.626930 TGAGCAAAACCCTGTAGTGTTT 58.373 40.909 0.00 0.00 36.29 2.83
2409 2484 3.290948 TGAGCAAAACCCTGTAGTGTT 57.709 42.857 0.00 0.00 0.00 3.32
2549 2625 1.377994 CTTGGGAGCAGCAGAGGTT 59.622 57.895 0.00 0.00 0.00 3.50
2555 2631 0.983467 TCACATACTTGGGAGCAGCA 59.017 50.000 0.00 0.00 29.81 4.41
2558 2634 3.153919 GGTTTTCACATACTTGGGAGCA 58.846 45.455 0.00 0.00 36.41 4.26
2570 2646 4.026744 TGGAAAATGACTGGGTTTTCACA 58.973 39.130 11.30 5.69 42.96 3.58
2571 2647 4.664150 TGGAAAATGACTGGGTTTTCAC 57.336 40.909 11.30 3.74 42.96 3.18
2574 2650 5.428184 TGTTTGGAAAATGACTGGGTTTT 57.572 34.783 0.00 0.00 0.00 2.43
2579 2655 4.378774 TGCATTGTTTGGAAAATGACTGG 58.621 39.130 0.00 0.00 36.13 4.00
2610 2686 1.686587 CAGGGTTGAGGTTTTGGGTTC 59.313 52.381 0.00 0.00 0.00 3.62
2616 2692 0.853530 AGCTCCAGGGTTGAGGTTTT 59.146 50.000 0.00 0.00 37.27 2.43
2620 2696 0.251634 GAGAAGCTCCAGGGTTGAGG 59.748 60.000 0.00 0.00 35.61 3.86
2626 2702 1.627834 AGAACAAGAGAAGCTCCAGGG 59.372 52.381 0.00 0.00 0.00 4.45
2627 2703 2.038295 ACAGAACAAGAGAAGCTCCAGG 59.962 50.000 0.00 0.00 0.00 4.45
2659 2742 0.749091 AGGCATTAGCAGCGCATCAA 60.749 50.000 11.47 0.00 44.61 2.57
2672 2755 2.318908 TGAAGGAAAGTGCAAGGCATT 58.681 42.857 0.00 0.00 41.91 3.56
2680 2763 2.159114 TGCAAAGGTTGAAGGAAAGTGC 60.159 45.455 0.00 0.00 0.00 4.40
2827 2910 0.904394 GGGGGAGCTTCAAAATGGCA 60.904 55.000 0.00 0.00 0.00 4.92
2843 2926 1.948721 GCTTCAAAATGGCGAGGGGG 61.949 60.000 0.00 0.00 0.00 5.40
2844 2927 0.967380 AGCTTCAAAATGGCGAGGGG 60.967 55.000 0.00 0.00 0.00 4.79
2845 2928 0.453390 GAGCTTCAAAATGGCGAGGG 59.547 55.000 0.00 0.00 0.00 4.30
2846 2929 0.453390 GGAGCTTCAAAATGGCGAGG 59.547 55.000 0.00 0.00 0.00 4.63
2847 2930 0.453390 GGGAGCTTCAAAATGGCGAG 59.547 55.000 0.00 0.00 0.00 5.03
2848 2931 0.965363 GGGGAGCTTCAAAATGGCGA 60.965 55.000 0.00 0.00 0.00 5.54
2870 2954 0.403655 TTACATTGGCCAGCCTGTCA 59.596 50.000 17.80 7.68 36.94 3.58
2883 2967 5.722021 AAACAAAGCCTCGGATTTACATT 57.278 34.783 0.00 0.00 32.11 2.71
3064 3150 8.007405 AGCCTTATTATTATTGAAACCACCAC 57.993 34.615 0.00 0.00 0.00 4.16
3065 3151 8.474025 CAAGCCTTATTATTATTGAAACCACCA 58.526 33.333 0.00 0.00 0.00 4.17
3073 3159 9.066892 CCAACTAGCAAGCCTTATTATTATTGA 57.933 33.333 0.00 0.00 0.00 2.57
3074 3160 8.850156 ACCAACTAGCAAGCCTTATTATTATTG 58.150 33.333 0.00 0.00 0.00 1.90
3079 3182 6.001449 TCACCAACTAGCAAGCCTTATTAT 57.999 37.500 0.00 0.00 0.00 1.28
3141 3262 3.669536 TCACAACAGTCAACAGTGTGAA 58.330 40.909 0.00 0.00 36.22 3.18
3179 3328 4.157120 ATCTACACCGCCACCGCC 62.157 66.667 0.00 0.00 0.00 6.13
3180 3329 2.585247 GATCTACACCGCCACCGC 60.585 66.667 0.00 0.00 0.00 5.68
3181 3330 2.106332 GGATCTACACCGCCACCG 59.894 66.667 0.00 0.00 0.00 4.94
3182 3331 0.757935 TAGGGATCTACACCGCCACC 60.758 60.000 0.00 0.00 0.00 4.61
3183 3332 0.388294 GTAGGGATCTACACCGCCAC 59.612 60.000 0.00 0.00 43.95 5.01
3184 3333 1.105167 CGTAGGGATCTACACCGCCA 61.105 60.000 0.00 0.00 44.56 5.69
3245 3394 8.267183 TCATCATTGACACTCCATTATTGTACT 58.733 33.333 0.00 0.00 0.00 2.73
3272 3427 3.829886 TCTGATTTGCTTGCTTAACCG 57.170 42.857 0.00 0.00 0.00 4.44
3285 3440 5.469421 GCTGGATCTGAATCGAATCTGATTT 59.531 40.000 19.92 4.21 38.65 2.17
3320 3475 4.648762 AGAGAGAGAGAGAGAGAGAGTCTG 59.351 50.000 0.00 0.00 34.71 3.51
3321 3476 4.877773 AGAGAGAGAGAGAGAGAGAGTCT 58.122 47.826 0.00 0.00 38.71 3.24
3322 3477 4.892934 AGAGAGAGAGAGAGAGAGAGAGTC 59.107 50.000 0.00 0.00 0.00 3.36
3323 3478 4.877773 AGAGAGAGAGAGAGAGAGAGAGT 58.122 47.826 0.00 0.00 0.00 3.24
3324 3479 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3325 3480 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3326 3481 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3327 3482 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3328 3483 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3329 3484 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3330 3485 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3331 3486 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
3332 3487 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
3333 3488 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
3334 3489 4.501229 GCTGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
3374 3529 0.543749 GCCATGTGAGGAGGCTTACT 59.456 55.000 0.00 0.00 44.92 2.24
3375 3530 0.811616 CGCCATGTGAGGAGGCTTAC 60.812 60.000 0.00 0.00 46.14 2.34
3377 3532 2.129555 AACGCCATGTGAGGAGGCTT 62.130 55.000 0.00 0.00 46.14 4.35
3378 3533 2.596851 AACGCCATGTGAGGAGGCT 61.597 57.895 0.00 0.00 46.14 4.58
3379 3534 2.045926 AACGCCATGTGAGGAGGC 60.046 61.111 0.00 0.00 44.89 4.70
3401 3559 4.722700 ATTTGCCGGCCGCTCAGT 62.723 61.111 26.77 9.43 38.78 3.41
3436 3594 3.386768 TTCAGTCAAGCAGGTGTACTC 57.613 47.619 0.00 0.00 0.00 2.59
3442 3600 1.202976 AGCCATTTCAGTCAAGCAGGT 60.203 47.619 0.00 0.00 0.00 4.00
3461 3619 1.210155 GCACCGGCAAAGCACTTAG 59.790 57.895 0.00 0.00 40.72 2.18
3462 3620 0.035598 TAGCACCGGCAAAGCACTTA 59.964 50.000 0.00 0.00 44.61 2.24
3463 3621 0.609131 ATAGCACCGGCAAAGCACTT 60.609 50.000 0.00 0.00 44.61 3.16
3473 3640 0.249657 GAAGAGAGCCATAGCACCGG 60.250 60.000 0.00 0.00 43.56 5.28
3484 3651 0.459411 GCTCCAGAACCGAAGAGAGC 60.459 60.000 0.00 0.00 39.86 4.09
3490 3657 2.214181 GAGAGCGCTCCAGAACCGAA 62.214 60.000 32.94 0.00 35.01 4.30
3491 3658 2.676822 AGAGCGCTCCAGAACCGA 60.677 61.111 32.94 0.00 0.00 4.69
3607 3778 5.160607 TGGGACATTCGAAAATCAGTACT 57.839 39.130 0.00 0.00 0.00 2.73
3608 3779 5.411669 ACTTGGGACATTCGAAAATCAGTAC 59.588 40.000 0.00 0.00 39.30 2.73
3609 3780 5.556915 ACTTGGGACATTCGAAAATCAGTA 58.443 37.500 0.00 0.00 39.30 2.74
3610 3781 4.398319 ACTTGGGACATTCGAAAATCAGT 58.602 39.130 0.00 0.22 39.30 3.41
3611 3782 5.643777 AGTACTTGGGACATTCGAAAATCAG 59.356 40.000 0.00 0.00 39.30 2.90
3628 3799 6.967767 CGGTAGATTTCTCACACTAGTACTTG 59.032 42.308 0.00 0.59 0.00 3.16
3634 3805 4.440250 CCCACGGTAGATTTCTCACACTAG 60.440 50.000 0.00 0.00 0.00 2.57
3635 3806 3.446161 CCCACGGTAGATTTCTCACACTA 59.554 47.826 0.00 0.00 0.00 2.74
3710 3913 6.483307 TGAAAACCTGCTCGATTTATATCAGG 59.517 38.462 4.69 4.69 44.80 3.86
3716 3919 6.599244 TCTTCATGAAAACCTGCTCGATTTAT 59.401 34.615 9.88 0.00 0.00 1.40
3739 3942 6.473778 CGAATAGAACATGTCGAACAAGATCT 59.526 38.462 0.00 0.00 34.26 2.75
3750 3953 8.731605 TCCTATCAGTATCGAATAGAACATGTC 58.268 37.037 0.00 0.00 0.00 3.06
3752 3955 8.951243 TCTCCTATCAGTATCGAATAGAACATG 58.049 37.037 3.18 0.00 0.00 3.21
3756 3959 9.575868 AAGTTCTCCTATCAGTATCGAATAGAA 57.424 33.333 3.18 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.