Multiple sequence alignment - TraesCS1B01G092800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G092800 chr1B 100.000 3173 0 0 1 3173 94513786 94510614 0.000000e+00 5860.0
1 TraesCS1B01G092800 chr1B 86.650 1633 186 23 549 2158 94547531 94545908 0.000000e+00 1779.0
2 TraesCS1B01G092800 chr1B 85.197 1547 155 31 666 2158 94550674 94549148 0.000000e+00 1520.0
3 TraesCS1B01G092800 chr1B 85.169 681 59 23 705 1346 94560045 94559368 0.000000e+00 660.0
4 TraesCS1B01G092800 chr1B 86.543 431 45 8 2215 2639 94549165 94548742 2.230000e-126 462.0
5 TraesCS1B01G092800 chr1B 82.460 439 56 16 2214 2645 94545926 94545502 6.470000e-97 364.0
6 TraesCS1B01G092800 chr1B 79.740 385 43 18 1 364 94547894 94547524 2.440000e-61 246.0
7 TraesCS1B01G092800 chr1A 92.017 1641 96 19 549 2158 57750471 57748835 0.000000e+00 2272.0
8 TraesCS1B01G092800 chr1A 87.273 1210 111 16 972 2158 57759374 57758185 0.000000e+00 1341.0
9 TraesCS1B01G092800 chr1A 87.810 443 29 11 2639 3059 57748394 57747955 2.200000e-136 496.0
10 TraesCS1B01G092800 chr1A 86.207 435 38 14 2214 2639 57748853 57748432 4.830000e-123 451.0
11 TraesCS1B01G092800 chr1A 88.123 261 28 3 1 259 57751902 57751643 1.110000e-79 307.0
12 TraesCS1B01G092800 chr1A 87.313 134 10 6 2361 2488 57753116 57752984 2.550000e-31 147.0
13 TraesCS1B01G092800 chr1A 89.552 67 7 0 3056 3122 57747877 57747811 5.640000e-13 86.1
14 TraesCS1B01G092800 chr1A 100.000 29 0 0 2173 2201 452897749 452897721 2.000000e-03 54.7
15 TraesCS1B01G092800 chr1D 93.204 1236 81 3 925 2158 59107213 59105979 0.000000e+00 1814.0
16 TraesCS1B01G092800 chr1D 85.075 1541 162 27 666 2158 59124729 59123209 0.000000e+00 1509.0
17 TraesCS1B01G092800 chr1D 91.943 422 30 2 2221 2638 59105990 59105569 3.530000e-164 588.0
18 TraesCS1B01G092800 chr1D 86.308 409 42 10 2215 2618 59123226 59122827 1.750000e-117 433.0
19 TraesCS1B01G092800 chr1D 88.372 258 26 4 1 256 59113099 59112844 1.110000e-79 307.0
20 TraesCS1B01G092800 chr1D 84.797 296 21 12 2783 3059 59105427 59105137 3.120000e-70 276.0
21 TraesCS1B01G092800 chr1D 86.486 185 22 3 365 548 8957015 8956833 1.930000e-47 200.0
22 TraesCS1B01G092800 chr1D 91.045 67 6 0 3056 3122 59105057 59104991 1.210000e-14 91.6
23 TraesCS1B01G092800 chr2A 87.435 191 18 4 363 550 131713630 131713817 6.890000e-52 215.0
24 TraesCS1B01G092800 chr2A 94.737 38 2 0 2163 2200 362185676 362185639 3.420000e-05 60.2
25 TraesCS1B01G092800 chr7D 86.559 186 22 3 365 549 513211737 513211554 5.370000e-48 202.0
26 TraesCS1B01G092800 chr7D 85.638 188 22 4 365 551 51831080 51830897 3.230000e-45 193.0
27 TraesCS1B01G092800 chr5D 84.925 199 26 2 354 551 116576064 116575869 6.940000e-47 198.0
28 TraesCS1B01G092800 chr5D 94.915 59 1 2 2156 2212 269088541 269088483 1.210000e-14 91.6
29 TraesCS1B01G092800 chr6D 85.864 191 20 6 365 551 428649107 428648920 2.500000e-46 196.0
30 TraesCS1B01G092800 chr4D 86.022 186 20 5 365 548 466669250 466669431 8.980000e-46 195.0
31 TraesCS1B01G092800 chr4D 95.833 48 1 1 2166 2212 301945720 301945767 3.390000e-10 76.8
32 TraesCS1B01G092800 chr2D 85.714 189 21 3 365 551 414295113 414295297 8.980000e-46 195.0
33 TraesCS1B01G092800 chr3D 85.638 188 21 4 365 550 83491890 83492073 3.230000e-45 193.0
34 TraesCS1B01G092800 chr3B 95.918 49 1 1 2165 2212 250568097 250568145 9.440000e-11 78.7
35 TraesCS1B01G092800 chr5B 85.965 57 4 4 2159 2211 390693358 390693414 1.230000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G092800 chr1B 94510614 94513786 3172 True 5860.000000 5860 100.000000 1 3173 1 chr1B.!!$R1 3172
1 TraesCS1B01G092800 chr1B 94545502 94550674 5172 True 874.200000 1779 84.118000 1 2645 5 chr1B.!!$R3 2644
2 TraesCS1B01G092800 chr1B 94559368 94560045 677 True 660.000000 660 85.169000 705 1346 1 chr1B.!!$R2 641
3 TraesCS1B01G092800 chr1A 57758185 57759374 1189 True 1341.000000 1341 87.273000 972 2158 1 chr1A.!!$R1 1186
4 TraesCS1B01G092800 chr1A 57747811 57753116 5305 True 626.516667 2272 88.503667 1 3122 6 chr1A.!!$R3 3121
5 TraesCS1B01G092800 chr1D 59122827 59124729 1902 True 971.000000 1509 85.691500 666 2618 2 chr1D.!!$R4 1952
6 TraesCS1B01G092800 chr1D 59104991 59107213 2222 True 692.400000 1814 90.247250 925 3122 4 chr1D.!!$R3 2197

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 2895 0.108804 GCGGACCGTGAATTCTCTGA 60.109 55.0 16.73 0.0 0.00 3.27 F
577 4522 0.828022 TTAGGTCACCTGCCATACGG 59.172 55.0 6.61 0.0 34.61 4.02 F
581 4526 1.082117 GTCACCTGCCATACGGTTCG 61.082 60.0 0.00 0.0 33.28 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1162 5150 1.002011 GGGTCTGGGGAAGCTTCAC 60.002 63.158 27.02 24.2 0.00 3.18 R
2115 6133 0.672401 ACAACGGCACATACGGAAGG 60.672 55.000 0.00 0.0 35.23 3.46 R
2442 6462 1.234821 TGTTGTCGAGAACCATTGCC 58.765 50.000 21.31 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 2892 1.140407 CTCGCGGACCGTGAATTCTC 61.140 60.000 28.58 1.90 45.55 2.87
25 2894 1.413767 CGCGGACCGTGAATTCTCTG 61.414 60.000 22.98 2.21 39.94 3.35
26 2895 0.108804 GCGGACCGTGAATTCTCTGA 60.109 55.000 16.73 0.00 0.00 3.27
50 2919 1.003580 TCAGAAGGACATTGACAGCCC 59.996 52.381 0.00 0.00 0.00 5.19
74 2943 4.207955 AGGACTCCAGGTTTTCTGTTTTC 58.792 43.478 0.00 0.00 41.83 2.29
75 2944 3.951680 GGACTCCAGGTTTTCTGTTTTCA 59.048 43.478 0.00 0.00 41.83 2.69
76 2945 4.401202 GGACTCCAGGTTTTCTGTTTTCAA 59.599 41.667 0.00 0.00 41.83 2.69
84 2953 6.426633 CAGGTTTTCTGTTTTCAACCTTTTGT 59.573 34.615 0.00 0.00 35.77 2.83
173 3042 9.612066 TGCATCAACATATACATTCAGAGTTTA 57.388 29.630 0.00 0.00 0.00 2.01
194 3065 3.937814 ACCACTCGCATTAACATTCAGA 58.062 40.909 0.00 0.00 0.00 3.27
195 3066 4.517285 ACCACTCGCATTAACATTCAGAT 58.483 39.130 0.00 0.00 0.00 2.90
198 3069 5.967674 CCACTCGCATTAACATTCAGATTTC 59.032 40.000 0.00 0.00 0.00 2.17
199 3070 6.183360 CCACTCGCATTAACATTCAGATTTCT 60.183 38.462 0.00 0.00 0.00 2.52
239 3110 7.396540 TCTAAGAAGAAGATTTCATTTGGCC 57.603 36.000 0.00 0.00 0.00 5.36
282 4224 9.810545 TTATTTGTTTAAAAGAGTTGACCCTTG 57.189 29.630 0.00 0.00 0.00 3.61
284 4226 6.693315 TGTTTAAAAGAGTTGACCCTTGAG 57.307 37.500 0.00 0.00 0.00 3.02
290 4232 7.554959 AAAAGAGTTGACCCTTGAGATAGTA 57.445 36.000 0.00 0.00 0.00 1.82
292 4234 7.741554 AAGAGTTGACCCTTGAGATAGTATT 57.258 36.000 0.00 0.00 0.00 1.89
293 4235 7.741554 AGAGTTGACCCTTGAGATAGTATTT 57.258 36.000 0.00 0.00 0.00 1.40
328 4270 3.931468 CCAAGGCATCTCATCATATCGAC 59.069 47.826 0.00 0.00 0.00 4.20
329 4271 4.562143 CCAAGGCATCTCATCATATCGACA 60.562 45.833 0.00 0.00 0.00 4.35
336 4278 5.444663 TCTCATCATATCGACACTCTTGG 57.555 43.478 0.00 0.00 0.00 3.61
340 4285 5.360999 TCATCATATCGACACTCTTGGTCTT 59.639 40.000 0.00 0.00 33.11 3.01
344 4289 3.577649 TCGACACTCTTGGTCTTCATC 57.422 47.619 0.00 0.00 33.11 2.92
352 4297 2.309755 TCTTGGTCTTCATCATTGCCCT 59.690 45.455 0.00 0.00 0.00 5.19
355 4300 2.242965 TGGTCTTCATCATTGCCCTCAT 59.757 45.455 0.00 0.00 0.00 2.90
356 4301 3.294214 GGTCTTCATCATTGCCCTCATT 58.706 45.455 0.00 0.00 0.00 2.57
357 4302 3.703052 GGTCTTCATCATTGCCCTCATTT 59.297 43.478 0.00 0.00 0.00 2.32
358 4303 4.441079 GGTCTTCATCATTGCCCTCATTTG 60.441 45.833 0.00 0.00 0.00 2.32
359 4304 4.159135 GTCTTCATCATTGCCCTCATTTGT 59.841 41.667 0.00 0.00 0.00 2.83
360 4305 5.357878 GTCTTCATCATTGCCCTCATTTGTA 59.642 40.000 0.00 0.00 0.00 2.41
361 4306 6.040166 GTCTTCATCATTGCCCTCATTTGTAT 59.960 38.462 0.00 0.00 0.00 2.29
362 4307 6.608405 TCTTCATCATTGCCCTCATTTGTATT 59.392 34.615 0.00 0.00 0.00 1.89
363 4308 6.795144 TCATCATTGCCCTCATTTGTATTT 57.205 33.333 0.00 0.00 0.00 1.40
364 4309 6.808829 TCATCATTGCCCTCATTTGTATTTC 58.191 36.000 0.00 0.00 0.00 2.17
365 4310 6.380560 TCATCATTGCCCTCATTTGTATTTCA 59.619 34.615 0.00 0.00 0.00 2.69
366 4311 6.211587 TCATTGCCCTCATTTGTATTTCAG 57.788 37.500 0.00 0.00 0.00 3.02
367 4312 5.716228 TCATTGCCCTCATTTGTATTTCAGT 59.284 36.000 0.00 0.00 0.00 3.41
368 4313 6.211184 TCATTGCCCTCATTTGTATTTCAGTT 59.789 34.615 0.00 0.00 0.00 3.16
369 4314 6.418057 TTGCCCTCATTTGTATTTCAGTTT 57.582 33.333 0.00 0.00 0.00 2.66
370 4315 6.418057 TGCCCTCATTTGTATTTCAGTTTT 57.582 33.333 0.00 0.00 0.00 2.43
371 4316 6.222389 TGCCCTCATTTGTATTTCAGTTTTG 58.778 36.000 0.00 0.00 0.00 2.44
372 4317 5.120674 GCCCTCATTTGTATTTCAGTTTTGC 59.879 40.000 0.00 0.00 0.00 3.68
373 4318 6.458210 CCCTCATTTGTATTTCAGTTTTGCT 58.542 36.000 0.00 0.00 0.00 3.91
374 4319 7.601856 CCCTCATTTGTATTTCAGTTTTGCTA 58.398 34.615 0.00 0.00 0.00 3.49
375 4320 8.087750 CCCTCATTTGTATTTCAGTTTTGCTAA 58.912 33.333 0.00 0.00 0.00 3.09
376 4321 9.132521 CCTCATTTGTATTTCAGTTTTGCTAAG 57.867 33.333 0.00 0.00 0.00 2.18
377 4322 9.683069 CTCATTTGTATTTCAGTTTTGCTAAGT 57.317 29.630 0.00 0.00 0.00 2.24
378 4323 9.677567 TCATTTGTATTTCAGTTTTGCTAAGTC 57.322 29.630 0.00 0.00 0.00 3.01
379 4324 9.683069 CATTTGTATTTCAGTTTTGCTAAGTCT 57.317 29.630 0.00 0.00 0.00 3.24
380 4325 9.899226 ATTTGTATTTCAGTTTTGCTAAGTCTC 57.101 29.630 0.00 0.00 0.00 3.36
381 4326 8.445275 TTGTATTTCAGTTTTGCTAAGTCTCA 57.555 30.769 0.00 0.00 0.00 3.27
382 4327 8.087982 TGTATTTCAGTTTTGCTAAGTCTCAG 57.912 34.615 0.00 0.00 0.00 3.35
383 4328 7.715249 TGTATTTCAGTTTTGCTAAGTCTCAGT 59.285 33.333 0.00 0.00 0.00 3.41
384 4329 6.604735 TTTCAGTTTTGCTAAGTCTCAGTC 57.395 37.500 0.00 0.00 0.00 3.51
385 4330 4.299155 TCAGTTTTGCTAAGTCTCAGTCG 58.701 43.478 0.00 0.00 0.00 4.18
386 4331 4.037565 TCAGTTTTGCTAAGTCTCAGTCGA 59.962 41.667 0.00 0.00 0.00 4.20
387 4332 4.149046 CAGTTTTGCTAAGTCTCAGTCGAC 59.851 45.833 7.70 7.70 0.00 4.20
388 4333 4.038162 AGTTTTGCTAAGTCTCAGTCGACT 59.962 41.667 13.58 13.58 45.73 4.18
408 4353 9.440784 GTCGACTTAGACTTCATTATGTCTTAG 57.559 37.037 8.70 4.59 42.67 2.18
412 4357 9.175312 ACTTAGACTTCATTATGTCTTAGTCGA 57.825 33.333 8.14 0.00 44.57 4.20
414 4359 9.952188 TTAGACTTCATTATGTCTTAGTCGATG 57.048 33.333 1.22 0.00 42.67 3.84
415 4360 6.920758 AGACTTCATTATGTCTTAGTCGATGC 59.079 38.462 0.00 0.00 40.21 3.91
416 4361 6.810911 ACTTCATTATGTCTTAGTCGATGCT 58.189 36.000 0.00 0.00 0.00 3.79
417 4362 7.941919 ACTTCATTATGTCTTAGTCGATGCTA 58.058 34.615 0.00 0.00 0.00 3.49
418 4363 8.580720 ACTTCATTATGTCTTAGTCGATGCTAT 58.419 33.333 0.00 0.00 0.00 2.97
426 4371 9.988815 ATGTCTTAGTCGATGCTATATTCTTTT 57.011 29.630 0.00 0.00 0.00 2.27
427 4372 9.249457 TGTCTTAGTCGATGCTATATTCTTTTG 57.751 33.333 0.00 0.00 0.00 2.44
428 4373 9.464714 GTCTTAGTCGATGCTATATTCTTTTGA 57.535 33.333 0.00 0.00 0.00 2.69
433 4378 8.986847 AGTCGATGCTATATTCTTTTGATCTTG 58.013 33.333 0.00 0.00 0.00 3.02
434 4379 7.743838 GTCGATGCTATATTCTTTTGATCTTGC 59.256 37.037 0.00 0.00 0.00 4.01
435 4380 7.442062 TCGATGCTATATTCTTTTGATCTTGCA 59.558 33.333 0.00 0.00 0.00 4.08
436 4381 8.235226 CGATGCTATATTCTTTTGATCTTGCAT 58.765 33.333 0.00 0.00 38.67 3.96
437 4382 9.343103 GATGCTATATTCTTTTGATCTTGCATG 57.657 33.333 0.00 0.00 36.57 4.06
438 4383 8.454570 TGCTATATTCTTTTGATCTTGCATGA 57.545 30.769 4.57 4.57 0.00 3.07
439 4384 8.905850 TGCTATATTCTTTTGATCTTGCATGAA 58.094 29.630 6.36 0.00 0.00 2.57
440 4385 9.395707 GCTATATTCTTTTGATCTTGCATGAAG 57.604 33.333 6.36 0.00 0.00 3.02
451 4396 5.723492 TCTTGCATGAAGATTCGTACATG 57.277 39.130 0.00 0.00 41.72 3.21
512 4457 8.939201 ATACAATATGACTTGACTGAGACTTG 57.061 34.615 0.00 0.00 0.00 3.16
513 4458 6.169094 ACAATATGACTTGACTGAGACTTGG 58.831 40.000 0.00 0.00 0.00 3.61
514 4459 6.169094 CAATATGACTTGACTGAGACTTGGT 58.831 40.000 0.00 0.00 0.00 3.67
515 4460 4.696479 ATGACTTGACTGAGACTTGGTT 57.304 40.909 0.00 0.00 0.00 3.67
516 4461 5.808366 ATGACTTGACTGAGACTTGGTTA 57.192 39.130 0.00 0.00 0.00 2.85
517 4462 5.607939 TGACTTGACTGAGACTTGGTTAA 57.392 39.130 0.00 0.00 0.00 2.01
518 4463 5.601662 TGACTTGACTGAGACTTGGTTAAG 58.398 41.667 9.86 9.86 39.86 1.85
528 4473 3.662247 ACTTGGTTAAGTCTCAGTCGG 57.338 47.619 0.00 0.00 43.53 4.79
529 4474 2.288886 ACTTGGTTAAGTCTCAGTCGGC 60.289 50.000 0.00 0.00 43.53 5.54
530 4475 1.629043 TGGTTAAGTCTCAGTCGGCT 58.371 50.000 0.00 0.00 0.00 5.52
531 4476 1.272490 TGGTTAAGTCTCAGTCGGCTG 59.728 52.381 11.77 11.77 43.87 4.85
541 4486 2.025155 TCAGTCGGCTGAGATCTAACC 58.975 52.381 17.42 0.00 45.94 2.85
542 4487 1.751351 CAGTCGGCTGAGATCTAACCA 59.249 52.381 12.86 0.00 45.28 3.67
543 4488 1.751924 AGTCGGCTGAGATCTAACCAC 59.248 52.381 0.00 0.00 0.00 4.16
544 4489 1.476891 GTCGGCTGAGATCTAACCACA 59.523 52.381 0.00 0.00 0.00 4.17
545 4490 1.476891 TCGGCTGAGATCTAACCACAC 59.523 52.381 0.00 0.00 0.00 3.82
546 4491 1.471676 CGGCTGAGATCTAACCACACC 60.472 57.143 0.00 0.00 0.00 4.16
547 4492 1.134371 GGCTGAGATCTAACCACACCC 60.134 57.143 0.00 0.00 0.00 4.61
548 4493 1.834263 GCTGAGATCTAACCACACCCT 59.166 52.381 0.00 0.00 0.00 4.34
551 4496 4.256920 CTGAGATCTAACCACACCCTTTG 58.743 47.826 0.00 0.00 0.00 2.77
570 4515 5.335661 CCTTTGTATTTGTTAGGTCACCTGC 60.336 44.000 6.61 0.00 34.61 4.85
577 4522 0.828022 TTAGGTCACCTGCCATACGG 59.172 55.000 6.61 0.00 34.61 4.02
581 4526 1.082117 GTCACCTGCCATACGGTTCG 61.082 60.000 0.00 0.00 33.28 3.95
586 4531 1.674817 CCTGCCATACGGTTCGAGTTT 60.675 52.381 0.00 0.00 33.28 2.66
599 4544 6.145048 ACGGTTCGAGTTTAGTAATGAACTTG 59.855 38.462 8.39 8.39 39.80 3.16
619 4564 2.875933 TGTTTCAAAGCCTTGACCTACG 59.124 45.455 0.00 0.00 41.34 3.51
671 4616 5.647589 GCATAAGCATGTCATCATATTGGG 58.352 41.667 0.00 0.00 41.58 4.12
693 4638 3.198068 GCTCAAATCGTGCATAGGAAGA 58.802 45.455 0.00 0.00 34.19 2.87
698 4643 3.827008 ATCGTGCATAGGAAGACACAT 57.173 42.857 0.00 0.00 33.23 3.21
719 4665 7.040201 ACACATGTATCCTCAAATAATGATGCC 60.040 37.037 0.00 0.00 37.44 4.40
733 4679 2.891941 GATGCCCGGAAGTGCCATGA 62.892 60.000 0.73 0.00 35.94 3.07
734 4680 2.124151 GCCCGGAAGTGCCATGAT 60.124 61.111 0.73 0.00 35.94 2.45
806 4767 2.158842 AGCATAGGCATCTTCTTCGCTT 60.159 45.455 0.67 0.00 44.61 4.68
840 4801 3.254024 TTCTTCCCTGCTGGTCGCC 62.254 63.158 9.00 0.00 38.05 5.54
889 4854 4.436998 GGTCCTCGCCACCACTCG 62.437 72.222 0.00 0.00 33.63 4.18
918 4883 6.212235 CAAATGGTATGCAAACTTGTGTACA 58.788 36.000 0.00 0.00 0.00 2.90
920 4885 5.176407 TGGTATGCAAACTTGTGTACAAC 57.824 39.130 0.00 0.00 0.00 3.32
922 4887 5.212194 GGTATGCAAACTTGTGTACAACAG 58.788 41.667 0.00 0.00 40.74 3.16
923 4888 5.008217 GGTATGCAAACTTGTGTACAACAGA 59.992 40.000 0.00 0.00 40.74 3.41
924 4889 4.614555 TGCAAACTTGTGTACAACAGAG 57.385 40.909 0.00 0.00 40.74 3.35
926 4891 4.094294 TGCAAACTTGTGTACAACAGAGAC 59.906 41.667 0.00 0.00 40.74 3.36
927 4892 4.495844 GCAAACTTGTGTACAACAGAGACC 60.496 45.833 0.00 0.00 40.74 3.85
928 4893 4.755266 AACTTGTGTACAACAGAGACCT 57.245 40.909 0.00 0.00 40.74 3.85
929 4894 5.864418 AACTTGTGTACAACAGAGACCTA 57.136 39.130 0.00 0.00 40.74 3.08
930 4895 5.455056 ACTTGTGTACAACAGAGACCTAG 57.545 43.478 0.00 0.00 40.74 3.02
931 4896 3.936372 TGTGTACAACAGAGACCTAGC 57.064 47.619 0.00 0.00 33.78 3.42
932 4897 3.497332 TGTGTACAACAGAGACCTAGCT 58.503 45.455 0.00 0.00 33.78 3.32
933 4898 3.506455 TGTGTACAACAGAGACCTAGCTC 59.494 47.826 0.00 0.00 33.78 4.09
934 4899 3.090037 TGTACAACAGAGACCTAGCTCC 58.910 50.000 0.00 0.00 35.49 4.70
938 4926 2.153034 ACAGAGACCTAGCTCCTTCC 57.847 55.000 0.00 0.00 35.49 3.46
956 4944 7.113658 TCCTTCCTCTTGTTCACTCATATAC 57.886 40.000 0.00 0.00 0.00 1.47
962 4950 9.862149 TCCTCTTGTTCACTCATATACTATACA 57.138 33.333 0.00 0.00 0.00 2.29
1162 5150 3.345808 CGCACCCTGTTCACCGTG 61.346 66.667 0.00 0.00 0.00 4.94
1410 5422 4.085357 TCAGTTTGTGTGTAATCCTGCT 57.915 40.909 0.00 0.00 0.00 4.24
1540 5552 5.347124 TCTTCAAAGACTATGGACCCCTAA 58.653 41.667 0.00 0.00 0.00 2.69
1575 5587 5.696724 CGTTGGAGTGGAAGTATATTCATCC 59.303 44.000 0.00 0.00 0.00 3.51
1616 5628 5.592054 TCGTAAAGAGCATGAACTGGATAG 58.408 41.667 0.00 0.00 0.00 2.08
1629 5641 6.349300 TGAACTGGATAGTGATTTTAGCCTC 58.651 40.000 0.00 0.00 37.19 4.70
1664 5679 2.875933 CAGGTGTCTTTTTCAACGGCTA 59.124 45.455 0.00 0.00 0.00 3.93
1666 5681 4.023193 CAGGTGTCTTTTTCAACGGCTATT 60.023 41.667 0.00 0.00 0.00 1.73
1695 5710 2.912956 TCTCACCCACAAGCCTTCTATT 59.087 45.455 0.00 0.00 0.00 1.73
1719 5734 2.298661 GGTGGACACCGAGGGGAAT 61.299 63.158 5.63 0.00 42.29 3.01
1723 5738 1.153349 GACACCGAGGGGAATGCTC 60.153 63.158 0.00 0.00 36.97 4.26
1724 5739 1.899437 GACACCGAGGGGAATGCTCA 61.899 60.000 0.00 0.00 36.97 4.26
2040 6058 4.404507 CACTGTTGAGTGGGATAAAACG 57.595 45.455 0.00 0.00 45.26 3.60
2111 6129 7.321963 CTCTTGGAGAAGACACTCGTGAGAG 62.322 52.000 3.44 0.00 46.94 3.20
2130 6148 1.134907 AGTTACCTTCCGTATGTGCCG 60.135 52.381 0.00 0.00 0.00 5.69
2158 6176 2.878406 TCAGAGTTACAAGCTTTGCACC 59.122 45.455 0.00 0.00 0.00 5.01
2159 6177 2.030805 CAGAGTTACAAGCTTTGCACCC 60.031 50.000 0.00 0.00 0.00 4.61
2160 6178 1.269723 GAGTTACAAGCTTTGCACCCC 59.730 52.381 0.00 0.00 0.00 4.95
2161 6179 1.133482 AGTTACAAGCTTTGCACCCCT 60.133 47.619 0.00 0.00 0.00 4.79
2162 6180 1.686587 GTTACAAGCTTTGCACCCCTT 59.313 47.619 0.00 0.00 0.00 3.95
2163 6181 2.080654 TACAAGCTTTGCACCCCTTT 57.919 45.000 0.00 0.00 0.00 3.11
2164 6182 0.752658 ACAAGCTTTGCACCCCTTTC 59.247 50.000 0.00 0.00 0.00 2.62
2165 6183 0.033920 CAAGCTTTGCACCCCTTTCC 59.966 55.000 0.00 0.00 0.00 3.13
2166 6184 0.105504 AAGCTTTGCACCCCTTTCCT 60.106 50.000 0.00 0.00 0.00 3.36
2167 6185 0.105504 AGCTTTGCACCCCTTTCCTT 60.106 50.000 0.00 0.00 0.00 3.36
2168 6186 0.318441 GCTTTGCACCCCTTTCCTTC 59.682 55.000 0.00 0.00 0.00 3.46
2169 6187 2.001076 CTTTGCACCCCTTTCCTTCT 57.999 50.000 0.00 0.00 0.00 2.85
2170 6188 2.319844 CTTTGCACCCCTTTCCTTCTT 58.680 47.619 0.00 0.00 0.00 2.52
2171 6189 3.496331 CTTTGCACCCCTTTCCTTCTTA 58.504 45.455 0.00 0.00 0.00 2.10
2172 6190 3.603965 TTGCACCCCTTTCCTTCTTAA 57.396 42.857 0.00 0.00 0.00 1.85
2173 6191 3.825908 TGCACCCCTTTCCTTCTTAAT 57.174 42.857 0.00 0.00 0.00 1.40
2174 6192 4.938575 TGCACCCCTTTCCTTCTTAATA 57.061 40.909 0.00 0.00 0.00 0.98
2175 6193 5.466127 TGCACCCCTTTCCTTCTTAATAT 57.534 39.130 0.00 0.00 0.00 1.28
2176 6194 6.584471 TGCACCCCTTTCCTTCTTAATATA 57.416 37.500 0.00 0.00 0.00 0.86
2177 6195 7.161715 TGCACCCCTTTCCTTCTTAATATAT 57.838 36.000 0.00 0.00 0.00 0.86
2178 6196 8.282801 TGCACCCCTTTCCTTCTTAATATATA 57.717 34.615 0.00 0.00 0.00 0.86
2179 6197 8.383175 TGCACCCCTTTCCTTCTTAATATATAG 58.617 37.037 0.00 0.00 0.00 1.31
2180 6198 8.383947 GCACCCCTTTCCTTCTTAATATATAGT 58.616 37.037 0.00 0.00 0.00 2.12
2184 6202 9.583765 CCCTTTCCTTCTTAATATATAGTACGC 57.416 37.037 0.00 0.00 0.00 4.42
2188 6206 9.903682 TTCCTTCTTAATATATAGTACGCACAC 57.096 33.333 0.00 0.00 0.00 3.82
2189 6207 9.293404 TCCTTCTTAATATATAGTACGCACACT 57.707 33.333 0.00 0.00 0.00 3.55
2190 6208 9.557338 CCTTCTTAATATATAGTACGCACACTC 57.443 37.037 0.00 0.00 0.00 3.51
2194 6212 8.683550 TTAATATATAGTACGCACACTCATGC 57.316 34.615 0.00 0.00 42.48 4.06
2195 6213 2.959507 ATAGTACGCACACTCATGCA 57.040 45.000 0.00 0.00 46.47 3.96
2196 6214 2.959507 TAGTACGCACACTCATGCAT 57.040 45.000 0.00 0.00 46.47 3.96
2197 6215 2.959507 AGTACGCACACTCATGCATA 57.040 45.000 0.00 0.00 46.47 3.14
2198 6216 3.459232 AGTACGCACACTCATGCATAT 57.541 42.857 0.00 0.00 46.47 1.78
2199 6217 3.797039 AGTACGCACACTCATGCATATT 58.203 40.909 0.00 0.00 46.47 1.28
2200 6218 3.804325 AGTACGCACACTCATGCATATTC 59.196 43.478 0.00 0.00 46.47 1.75
2201 6219 1.594397 ACGCACACTCATGCATATTCG 59.406 47.619 0.00 0.00 46.47 3.34
2202 6220 1.860326 CGCACACTCATGCATATTCGA 59.140 47.619 0.00 0.00 46.47 3.71
2203 6221 2.097056 CGCACACTCATGCATATTCGAG 60.097 50.000 0.00 4.40 46.47 4.04
2204 6222 3.126073 GCACACTCATGCATATTCGAGA 58.874 45.455 16.34 0.93 45.39 4.04
2205 6223 3.557185 GCACACTCATGCATATTCGAGAA 59.443 43.478 16.34 0.00 45.39 2.87
2206 6224 4.034394 GCACACTCATGCATATTCGAGAAA 59.966 41.667 16.34 0.00 45.39 2.52
2207 6225 5.447683 GCACACTCATGCATATTCGAGAAAA 60.448 40.000 16.34 0.00 45.39 2.29
2208 6226 6.545508 CACACTCATGCATATTCGAGAAAAA 58.454 36.000 16.34 0.00 0.00 1.94
2240 6258 4.852134 ACAAGCTTTGCACATATGACAA 57.148 36.364 10.38 10.47 0.00 3.18
2440 6460 3.932710 TGCTTTATGTACTTGCCTCTTCG 59.067 43.478 0.00 0.00 0.00 3.79
2442 6462 2.203800 TATGTACTTGCCTCTTCGCG 57.796 50.000 0.00 0.00 0.00 5.87
2549 6578 3.208594 TGTCTCCTGTGCATATCATTGC 58.791 45.455 0.00 0.00 43.07 3.56
2576 6606 8.687824 ACTTAAATTTGGATGTTCTATTTGCG 57.312 30.769 0.00 0.00 0.00 4.85
2600 6630 5.239525 GGTTGTGGGATGTATAAGCATCTTC 59.760 44.000 6.11 1.24 43.41 2.87
2609 6639 6.299805 TGTATAAGCATCTTCTTGACAGGT 57.700 37.500 0.00 0.00 0.00 4.00
2707 6778 3.185155 CGAGTTACGTCTCCCGCT 58.815 61.111 0.00 0.00 41.42 5.52
2708 6779 1.226323 CGAGTTACGTCTCCCGCTG 60.226 63.158 0.00 0.00 41.42 5.18
2764 6842 4.455877 CGTCAGCCCTCTGTTTCTTTTTAT 59.544 41.667 0.00 0.00 41.10 1.40
2782 6860 4.595762 TTATTACGTATGTGGGCTCTCC 57.404 45.455 0.00 0.00 0.00 3.71
2786 6864 0.103208 CGTATGTGGGCTCTCCTGTC 59.897 60.000 0.00 0.00 36.20 3.51
2796 6874 2.172293 GGCTCTCCTGTCCAAGATGAAT 59.828 50.000 0.00 0.00 0.00 2.57
2797 6875 3.371380 GGCTCTCCTGTCCAAGATGAATT 60.371 47.826 0.00 0.00 0.00 2.17
2798 6876 4.268359 GCTCTCCTGTCCAAGATGAATTT 58.732 43.478 0.00 0.00 0.00 1.82
2827 6907 1.071385 ACACCTGAGAGTGCAAAGGAG 59.929 52.381 7.43 3.15 41.67 3.69
2928 7010 4.879545 TGAATTAACCTTGGCGGAAGATAC 59.120 41.667 0.00 0.00 32.82 2.24
2934 7016 0.744414 TTGGCGGAAGATACTGCAGC 60.744 55.000 15.27 0.00 43.15 5.25
2971 7068 5.550232 TGATCATTGATCAAACCTTGTCG 57.450 39.130 23.72 0.00 44.70 4.35
2987 7084 3.961480 TGTCGTGGAGAACAATCTGAT 57.039 42.857 0.00 0.00 35.54 2.90
3017 7114 7.869429 ACAAGCAATTTTACTGAATCTTTGGAG 59.131 33.333 0.00 0.00 0.00 3.86
3021 7118 8.730680 GCAATTTTACTGAATCTTTGGAGACTA 58.269 33.333 0.00 0.00 33.99 2.59
3028 7125 8.503458 ACTGAATCTTTGGAGACTATCATTTG 57.497 34.615 0.00 0.00 33.99 2.32
3042 7139 8.214364 AGACTATCATTTGAAGAACCCTTATCC 58.786 37.037 0.00 0.00 31.62 2.59
3059 7156 2.145397 TCCAGGAACGCTCTGTAGAT 57.855 50.000 0.00 0.00 0.00 1.98
3062 7242 0.382515 AGGAACGCTCTGTAGATCGC 59.617 55.000 5.18 0.00 37.20 4.58
3065 7245 2.031069 GGAACGCTCTGTAGATCGCATA 60.031 50.000 5.18 0.00 37.20 3.14
3070 7250 4.275196 ACGCTCTGTAGATCGCATAGTTTA 59.725 41.667 5.18 0.00 37.20 2.01
3076 7256 6.856426 TCTGTAGATCGCATAGTTTAATCGTG 59.144 38.462 0.00 0.00 0.00 4.35
3107 7287 8.230486 GGAAGTATATATTCAATTGAAGCACCG 58.770 37.037 24.17 0.00 37.48 4.94
3122 7302 2.630098 AGCACCGCATGATATACACTCT 59.370 45.455 0.00 0.00 0.00 3.24
3123 7303 3.826729 AGCACCGCATGATATACACTCTA 59.173 43.478 0.00 0.00 0.00 2.43
3124 7304 4.082517 AGCACCGCATGATATACACTCTAG 60.083 45.833 0.00 0.00 0.00 2.43
3125 7305 4.169508 CACCGCATGATATACACTCTAGC 58.830 47.826 0.00 0.00 0.00 3.42
3126 7306 4.082517 CACCGCATGATATACACTCTAGCT 60.083 45.833 0.00 0.00 0.00 3.32
3127 7307 4.156922 ACCGCATGATATACACTCTAGCTC 59.843 45.833 0.00 0.00 0.00 4.09
3128 7308 4.156739 CCGCATGATATACACTCTAGCTCA 59.843 45.833 0.00 0.00 0.00 4.26
3129 7309 5.092105 CGCATGATATACACTCTAGCTCAC 58.908 45.833 0.00 0.00 0.00 3.51
3130 7310 5.335191 CGCATGATATACACTCTAGCTCACA 60.335 44.000 0.00 0.00 0.00 3.58
3131 7311 6.624642 CGCATGATATACACTCTAGCTCACAT 60.625 42.308 0.00 0.00 0.00 3.21
3132 7312 6.751425 GCATGATATACACTCTAGCTCACATC 59.249 42.308 0.00 0.00 0.00 3.06
3133 7313 7.576477 GCATGATATACACTCTAGCTCACATCA 60.576 40.741 0.00 0.00 0.00 3.07
3134 7314 7.446001 TGATATACACTCTAGCTCACATCAG 57.554 40.000 0.00 0.00 0.00 2.90
3135 7315 7.227156 TGATATACACTCTAGCTCACATCAGA 58.773 38.462 0.00 0.00 0.00 3.27
3136 7316 7.721399 TGATATACACTCTAGCTCACATCAGAA 59.279 37.037 0.00 0.00 0.00 3.02
3137 7317 6.782082 ATACACTCTAGCTCACATCAGAAA 57.218 37.500 0.00 0.00 0.00 2.52
3138 7318 5.474578 ACACTCTAGCTCACATCAGAAAA 57.525 39.130 0.00 0.00 0.00 2.29
3139 7319 5.477510 ACACTCTAGCTCACATCAGAAAAG 58.522 41.667 0.00 0.00 0.00 2.27
3140 7320 5.011533 ACACTCTAGCTCACATCAGAAAAGT 59.988 40.000 0.00 0.00 0.00 2.66
3141 7321 5.348179 CACTCTAGCTCACATCAGAAAAGTG 59.652 44.000 0.00 0.00 34.67 3.16
3142 7322 5.011533 ACTCTAGCTCACATCAGAAAAGTGT 59.988 40.000 0.00 0.00 34.94 3.55
3143 7323 5.233225 TCTAGCTCACATCAGAAAAGTGTG 58.767 41.667 0.00 0.00 43.41 3.82
3150 7330 6.905578 TCACATCAGAAAAGTGTGAATGATG 58.094 36.000 10.54 10.54 46.45 3.07
3154 7334 8.836959 CATCAGAAAAGTGTGAATGATGTATG 57.163 34.615 5.11 0.00 39.29 2.39
3155 7335 7.381766 TCAGAAAAGTGTGAATGATGTATGG 57.618 36.000 0.00 0.00 0.00 2.74
3156 7336 7.167535 TCAGAAAAGTGTGAATGATGTATGGA 58.832 34.615 0.00 0.00 0.00 3.41
3157 7337 7.665145 TCAGAAAAGTGTGAATGATGTATGGAA 59.335 33.333 0.00 0.00 0.00 3.53
3158 7338 8.298854 CAGAAAAGTGTGAATGATGTATGGAAA 58.701 33.333 0.00 0.00 0.00 3.13
3159 7339 8.299570 AGAAAAGTGTGAATGATGTATGGAAAC 58.700 33.333 0.00 0.00 0.00 2.78
3160 7340 5.801350 AGTGTGAATGATGTATGGAAACG 57.199 39.130 0.00 0.00 0.00 3.60
3161 7341 5.487433 AGTGTGAATGATGTATGGAAACGA 58.513 37.500 0.00 0.00 0.00 3.85
3162 7342 5.937540 AGTGTGAATGATGTATGGAAACGAA 59.062 36.000 0.00 0.00 0.00 3.85
3163 7343 6.092670 AGTGTGAATGATGTATGGAAACGAAG 59.907 38.462 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.558554 ATTCACGGTCCGCGAGAAGG 62.559 60.000 12.28 1.20 0.00 3.46
1 2 0.736325 AATTCACGGTCCGCGAGAAG 60.736 55.000 12.28 3.83 0.00 2.85
4 5 1.140407 GAGAATTCACGGTCCGCGAG 61.140 60.000 12.28 1.48 0.00 5.03
23 2892 6.564709 TGTCAATGTCCTTCTGAATTTCAG 57.435 37.500 18.49 18.49 45.59 3.02
25 2894 5.397326 GCTGTCAATGTCCTTCTGAATTTC 58.603 41.667 0.00 0.00 0.00 2.17
26 2895 4.219288 GGCTGTCAATGTCCTTCTGAATTT 59.781 41.667 0.00 0.00 0.00 1.82
33 2902 1.815003 CTTGGGCTGTCAATGTCCTTC 59.185 52.381 0.00 0.00 0.00 3.46
75 2944 2.877043 CTGCTCAGCAACAAAAGGTT 57.123 45.000 0.00 0.00 38.41 3.50
84 2953 7.080473 TTTCTTATGGAATAGCTGCTCAGCAA 61.080 38.462 22.12 5.88 44.06 3.91
86 2955 4.818546 TTTCTTATGGAATAGCTGCTCAGC 59.181 41.667 13.60 13.60 43.01 4.26
88 2957 6.179756 TGTTTTCTTATGGAATAGCTGCTCA 58.820 36.000 4.91 0.00 33.53 4.26
136 3005 6.872628 ATATGTTGATGCATACCTGTTCTG 57.127 37.500 0.00 0.00 34.59 3.02
137 3006 7.508687 TGTATATGTTGATGCATACCTGTTCT 58.491 34.615 0.00 0.00 34.59 3.01
173 3042 3.937814 TCTGAATGTTAATGCGAGTGGT 58.062 40.909 0.00 0.00 0.00 4.16
186 3057 9.972106 AAGGAAGATCTAAAGAAATCTGAATGT 57.028 29.630 0.00 0.00 32.62 2.71
220 3091 5.649782 TCAGGCCAAATGAAATCTTCTTC 57.350 39.130 5.01 0.00 0.00 2.87
256 3157 9.810545 CAAGGGTCAACTCTTTTAAACAAATAA 57.189 29.630 0.00 0.00 0.00 1.40
262 3163 6.937436 TCTCAAGGGTCAACTCTTTTAAAC 57.063 37.500 0.00 0.00 0.00 2.01
292 4234 2.223745 GCCTTGGTGGAGTACGAAAAA 58.776 47.619 0.00 0.00 38.35 1.94
293 4235 1.141254 TGCCTTGGTGGAGTACGAAAA 59.859 47.619 0.00 0.00 38.35 2.29
298 4240 1.555075 TGAGATGCCTTGGTGGAGTAC 59.445 52.381 0.00 0.00 38.35 2.73
328 4270 3.128242 GGCAATGATGAAGACCAAGAGTG 59.872 47.826 0.00 0.00 0.00 3.51
329 4271 3.350833 GGCAATGATGAAGACCAAGAGT 58.649 45.455 0.00 0.00 0.00 3.24
336 4278 4.159135 ACAAATGAGGGCAATGATGAAGAC 59.841 41.667 0.00 0.00 0.00 3.01
340 4285 6.380560 TGAAATACAAATGAGGGCAATGATGA 59.619 34.615 0.00 0.00 0.00 2.92
344 4289 5.969423 ACTGAAATACAAATGAGGGCAATG 58.031 37.500 0.00 0.00 0.00 2.82
352 4297 9.677567 GACTTAGCAAAACTGAAATACAAATGA 57.322 29.630 0.00 0.00 0.00 2.57
355 4300 8.898761 TGAGACTTAGCAAAACTGAAATACAAA 58.101 29.630 0.00 0.00 0.00 2.83
356 4301 8.445275 TGAGACTTAGCAAAACTGAAATACAA 57.555 30.769 0.00 0.00 0.00 2.41
357 4302 7.715249 ACTGAGACTTAGCAAAACTGAAATACA 59.285 33.333 0.00 0.00 0.00 2.29
358 4303 8.089115 ACTGAGACTTAGCAAAACTGAAATAC 57.911 34.615 0.00 0.00 0.00 1.89
359 4304 7.116376 CGACTGAGACTTAGCAAAACTGAAATA 59.884 37.037 0.00 0.00 0.00 1.40
360 4305 6.073548 CGACTGAGACTTAGCAAAACTGAAAT 60.074 38.462 0.00 0.00 0.00 2.17
361 4306 5.234329 CGACTGAGACTTAGCAAAACTGAAA 59.766 40.000 0.00 0.00 0.00 2.69
362 4307 4.745125 CGACTGAGACTTAGCAAAACTGAA 59.255 41.667 0.00 0.00 0.00 3.02
363 4308 4.037565 TCGACTGAGACTTAGCAAAACTGA 59.962 41.667 0.00 0.00 0.00 3.41
364 4309 4.149046 GTCGACTGAGACTTAGCAAAACTG 59.851 45.833 8.70 0.00 38.09 3.16
365 4310 4.299978 GTCGACTGAGACTTAGCAAAACT 58.700 43.478 8.70 0.00 38.09 2.66
366 4311 4.632740 GTCGACTGAGACTTAGCAAAAC 57.367 45.455 8.70 0.00 38.09 2.43
377 4322 7.337184 ACATAATGAAGTCTAAGTCGACTGAGA 59.663 37.037 26.12 26.12 43.14 3.27
378 4323 7.476667 ACATAATGAAGTCTAAGTCGACTGAG 58.523 38.462 22.32 22.32 43.14 3.35
379 4324 7.337184 AGACATAATGAAGTCTAAGTCGACTGA 59.663 37.037 20.85 11.31 43.14 3.41
380 4325 7.476667 AGACATAATGAAGTCTAAGTCGACTG 58.523 38.462 20.85 7.79 43.14 3.51
381 4326 7.633193 AGACATAATGAAGTCTAAGTCGACT 57.367 36.000 13.58 13.58 45.73 4.18
382 4327 9.440784 CTAAGACATAATGAAGTCTAAGTCGAC 57.559 37.037 7.70 7.70 43.88 4.20
383 4328 9.175312 ACTAAGACATAATGAAGTCTAAGTCGA 57.825 33.333 0.00 0.00 43.88 4.20
384 4329 9.440784 GACTAAGACATAATGAAGTCTAAGTCG 57.559 37.037 0.00 0.00 43.88 4.18
385 4330 9.440784 CGACTAAGACATAATGAAGTCTAAGTC 57.559 37.037 0.00 0.00 43.88 3.01
386 4331 9.175312 TCGACTAAGACATAATGAAGTCTAAGT 57.825 33.333 0.00 0.00 43.88 2.24
388 4333 9.952188 CATCGACTAAGACATAATGAAGTCTAA 57.048 33.333 0.00 0.00 43.88 2.10
389 4334 8.076781 GCATCGACTAAGACATAATGAAGTCTA 58.923 37.037 0.00 0.00 43.88 2.59
390 4335 6.920758 GCATCGACTAAGACATAATGAAGTCT 59.079 38.462 0.00 0.00 46.45 3.24
391 4336 6.920758 AGCATCGACTAAGACATAATGAAGTC 59.079 38.462 0.00 0.00 35.02 3.01
392 4337 6.810911 AGCATCGACTAAGACATAATGAAGT 58.189 36.000 0.00 0.00 0.00 3.01
393 4338 8.978564 ATAGCATCGACTAAGACATAATGAAG 57.021 34.615 0.00 0.00 0.00 3.02
400 4345 9.988815 AAAAGAATATAGCATCGACTAAGACAT 57.011 29.630 0.00 0.00 0.00 3.06
401 4346 9.249457 CAAAAGAATATAGCATCGACTAAGACA 57.751 33.333 0.00 0.00 0.00 3.41
402 4347 9.464714 TCAAAAGAATATAGCATCGACTAAGAC 57.535 33.333 0.00 0.00 0.00 3.01
407 4352 8.986847 CAAGATCAAAAGAATATAGCATCGACT 58.013 33.333 0.00 0.00 0.00 4.18
408 4353 7.743838 GCAAGATCAAAAGAATATAGCATCGAC 59.256 37.037 0.00 0.00 0.00 4.20
409 4354 7.442062 TGCAAGATCAAAAGAATATAGCATCGA 59.558 33.333 0.00 0.00 0.00 3.59
410 4355 7.578852 TGCAAGATCAAAAGAATATAGCATCG 58.421 34.615 0.00 0.00 0.00 3.84
411 4356 9.343103 CATGCAAGATCAAAAGAATATAGCATC 57.657 33.333 0.00 0.00 35.86 3.91
412 4357 9.074576 TCATGCAAGATCAAAAGAATATAGCAT 57.925 29.630 0.00 0.00 38.23 3.79
413 4358 8.454570 TCATGCAAGATCAAAAGAATATAGCA 57.545 30.769 0.00 0.00 0.00 3.49
414 4359 9.395707 CTTCATGCAAGATCAAAAGAATATAGC 57.604 33.333 0.00 0.00 33.29 2.97
429 4374 5.723492 CATGTACGAATCTTCATGCAAGA 57.277 39.130 9.18 9.18 45.60 3.02
487 4432 7.984050 CCAAGTCTCAGTCAAGTCATATTGTAT 59.016 37.037 0.00 0.00 0.00 2.29
488 4433 7.039011 ACCAAGTCTCAGTCAAGTCATATTGTA 60.039 37.037 0.00 0.00 0.00 2.41
489 4434 6.169094 CCAAGTCTCAGTCAAGTCATATTGT 58.831 40.000 0.00 0.00 0.00 2.71
490 4435 6.169094 ACCAAGTCTCAGTCAAGTCATATTG 58.831 40.000 0.00 0.00 0.00 1.90
491 4436 6.365970 ACCAAGTCTCAGTCAAGTCATATT 57.634 37.500 0.00 0.00 0.00 1.28
492 4437 6.365970 AACCAAGTCTCAGTCAAGTCATAT 57.634 37.500 0.00 0.00 0.00 1.78
493 4438 5.808366 AACCAAGTCTCAGTCAAGTCATA 57.192 39.130 0.00 0.00 0.00 2.15
494 4439 4.696479 AACCAAGTCTCAGTCAAGTCAT 57.304 40.909 0.00 0.00 0.00 3.06
495 4440 5.128827 ACTTAACCAAGTCTCAGTCAAGTCA 59.871 40.000 0.00 0.00 41.25 3.41
496 4441 5.602628 ACTTAACCAAGTCTCAGTCAAGTC 58.397 41.667 0.00 0.00 41.25 3.01
497 4442 5.615925 ACTTAACCAAGTCTCAGTCAAGT 57.384 39.130 0.00 0.00 41.25 3.16
509 4454 2.028930 AGCCGACTGAGACTTAACCAAG 60.029 50.000 0.00 0.00 37.81 3.61
510 4455 1.968493 AGCCGACTGAGACTTAACCAA 59.032 47.619 0.00 0.00 0.00 3.67
511 4456 1.629043 AGCCGACTGAGACTTAACCA 58.371 50.000 0.00 0.00 0.00 3.67
522 4467 1.751351 TGGTTAGATCTCAGCCGACTG 59.249 52.381 0.00 0.00 45.95 3.51
523 4468 1.751924 GTGGTTAGATCTCAGCCGACT 59.248 52.381 0.00 0.00 0.00 4.18
524 4469 1.476891 TGTGGTTAGATCTCAGCCGAC 59.523 52.381 0.00 0.00 0.00 4.79
525 4470 1.476891 GTGTGGTTAGATCTCAGCCGA 59.523 52.381 0.00 0.00 0.00 5.54
526 4471 1.471676 GGTGTGGTTAGATCTCAGCCG 60.472 57.143 0.00 0.00 0.00 5.52
527 4472 1.134371 GGGTGTGGTTAGATCTCAGCC 60.134 57.143 12.28 12.28 38.99 4.85
528 4473 1.834263 AGGGTGTGGTTAGATCTCAGC 59.166 52.381 0.00 0.00 0.00 4.26
529 4474 4.256920 CAAAGGGTGTGGTTAGATCTCAG 58.743 47.826 0.00 0.00 0.00 3.35
530 4475 3.650942 ACAAAGGGTGTGGTTAGATCTCA 59.349 43.478 0.00 0.00 39.72 3.27
531 4476 4.287766 ACAAAGGGTGTGGTTAGATCTC 57.712 45.455 0.00 0.00 39.72 2.75
532 4477 6.388619 AATACAAAGGGTGTGGTTAGATCT 57.611 37.500 0.00 0.00 41.89 2.75
533 4478 6.433093 ACAAATACAAAGGGTGTGGTTAGATC 59.567 38.462 0.00 0.00 41.89 2.75
534 4479 6.311735 ACAAATACAAAGGGTGTGGTTAGAT 58.688 36.000 0.00 0.00 41.89 1.98
535 4480 5.697067 ACAAATACAAAGGGTGTGGTTAGA 58.303 37.500 0.00 0.00 41.89 2.10
536 4481 6.399639 AACAAATACAAAGGGTGTGGTTAG 57.600 37.500 0.00 0.00 41.89 2.34
537 4482 6.490721 CCTAACAAATACAAAGGGTGTGGTTA 59.509 38.462 0.00 0.00 41.89 2.85
538 4483 5.303333 CCTAACAAATACAAAGGGTGTGGTT 59.697 40.000 0.00 0.00 41.89 3.67
539 4484 4.830600 CCTAACAAATACAAAGGGTGTGGT 59.169 41.667 0.00 0.00 41.89 4.16
540 4485 4.830600 ACCTAACAAATACAAAGGGTGTGG 59.169 41.667 0.00 0.00 41.89 4.17
541 4486 5.533154 TGACCTAACAAATACAAAGGGTGTG 59.467 40.000 0.00 0.00 41.89 3.82
542 4487 5.533528 GTGACCTAACAAATACAAAGGGTGT 59.466 40.000 0.00 0.00 44.82 4.16
543 4488 5.048294 GGTGACCTAACAAATACAAAGGGTG 60.048 44.000 0.00 0.00 0.00 4.61
544 4489 5.074804 GGTGACCTAACAAATACAAAGGGT 58.925 41.667 0.00 0.00 0.00 4.34
545 4490 5.183140 CAGGTGACCTAACAAATACAAAGGG 59.817 44.000 2.59 0.00 29.64 3.95
546 4491 5.335661 GCAGGTGACCTAACAAATACAAAGG 60.336 44.000 2.59 0.00 29.64 3.11
547 4492 5.335661 GGCAGGTGACCTAACAAATACAAAG 60.336 44.000 2.59 0.00 29.64 2.77
548 4493 4.521256 GGCAGGTGACCTAACAAATACAAA 59.479 41.667 2.59 0.00 29.64 2.83
551 4496 3.681593 TGGCAGGTGACCTAACAAATAC 58.318 45.455 2.59 0.00 29.64 1.89
570 4515 6.267817 TCATTACTAAACTCGAACCGTATGG 58.732 40.000 0.00 0.00 42.84 2.74
577 4522 9.366513 GAAACAAGTTCATTACTAAACTCGAAC 57.633 33.333 0.00 0.00 35.54 3.95
586 4531 7.817418 AGGCTTTGAAACAAGTTCATTACTA 57.183 32.000 0.00 0.00 45.71 1.82
599 4544 3.135994 TCGTAGGTCAAGGCTTTGAAAC 58.864 45.455 13.42 9.39 44.49 2.78
604 4549 2.289506 GGAGTTCGTAGGTCAAGGCTTT 60.290 50.000 0.00 0.00 0.00 3.51
611 4556 4.345859 AACAAATGGAGTTCGTAGGTCA 57.654 40.909 0.00 0.00 0.00 4.02
653 4598 2.109480 AGCCCCAATATGATGACATGCT 59.891 45.455 0.00 0.00 37.87 3.79
657 4602 3.949586 TTGAGCCCCAATATGATGACA 57.050 42.857 0.00 0.00 0.00 3.58
671 4616 1.953559 TCCTATGCACGATTTGAGCC 58.046 50.000 0.00 0.00 32.62 4.70
693 4638 7.040201 GGCATCATTATTTGAGGATACATGTGT 60.040 37.037 9.11 0.10 38.42 3.72
698 4643 5.003160 CGGGCATCATTATTTGAGGATACA 58.997 41.667 0.00 0.00 38.42 2.29
719 4665 1.233019 GATGATCATGGCACTTCCGG 58.767 55.000 14.30 0.00 37.80 5.14
733 4679 2.033049 GCTTCTTGCTCGCATTGATGAT 59.967 45.455 0.00 0.00 38.95 2.45
734 4680 1.399440 GCTTCTTGCTCGCATTGATGA 59.601 47.619 0.00 0.00 38.95 2.92
806 4767 3.495100 GGAAGAAGAAGTCACTTGGAGCA 60.495 47.826 0.00 0.00 0.00 4.26
818 4779 1.674221 CGACCAGCAGGGAAGAAGAAG 60.674 57.143 0.00 0.00 41.15 2.85
918 4883 2.043801 AGGAAGGAGCTAGGTCTCTGTT 59.956 50.000 20.67 9.82 33.70 3.16
920 4885 2.091885 AGAGGAAGGAGCTAGGTCTCTG 60.092 54.545 20.67 0.00 33.70 3.35
922 4887 2.693074 CAAGAGGAAGGAGCTAGGTCTC 59.307 54.545 20.67 11.60 0.00 3.36
923 4888 2.043801 ACAAGAGGAAGGAGCTAGGTCT 59.956 50.000 20.67 2.52 0.00 3.85
924 4889 2.462723 ACAAGAGGAAGGAGCTAGGTC 58.537 52.381 13.67 13.67 0.00 3.85
926 4891 2.834549 TGAACAAGAGGAAGGAGCTAGG 59.165 50.000 0.00 0.00 0.00 3.02
927 4892 3.513515 AGTGAACAAGAGGAAGGAGCTAG 59.486 47.826 0.00 0.00 0.00 3.42
928 4893 3.511477 AGTGAACAAGAGGAAGGAGCTA 58.489 45.455 0.00 0.00 0.00 3.32
929 4894 2.301583 GAGTGAACAAGAGGAAGGAGCT 59.698 50.000 0.00 0.00 0.00 4.09
930 4895 2.037772 TGAGTGAACAAGAGGAAGGAGC 59.962 50.000 0.00 0.00 0.00 4.70
931 4896 4.550076 ATGAGTGAACAAGAGGAAGGAG 57.450 45.455 0.00 0.00 0.00 3.69
932 4897 6.897966 AGTATATGAGTGAACAAGAGGAAGGA 59.102 38.462 0.00 0.00 0.00 3.36
933 4898 7.118496 AGTATATGAGTGAACAAGAGGAAGG 57.882 40.000 0.00 0.00 0.00 3.46
962 4950 4.883585 TCTGAGAAATGCAAACACAGAAGT 59.116 37.500 12.70 0.00 30.99 3.01
968 4956 5.825507 AGAAGTTCTGAGAAATGCAAACAC 58.174 37.500 4.10 0.00 0.00 3.32
1162 5150 1.002011 GGGTCTGGGGAAGCTTCAC 60.002 63.158 27.02 24.20 0.00 3.18
1184 5172 1.267806 CATGCTTTGTGAAGAAGCCGT 59.732 47.619 6.40 0.00 46.85 5.68
1410 5422 1.975660 GTGCAACCCACTCCTTTGTA 58.024 50.000 0.00 0.00 41.35 2.41
1575 5587 3.230522 AACCCGTCCTCCCGTTTCG 62.231 63.158 0.00 0.00 0.00 3.46
1616 5628 2.640316 ATCGGGGAGGCTAAAATCAC 57.360 50.000 0.00 0.00 0.00 3.06
1629 5641 2.375345 ACCTGGCAACCTATCGGGG 61.375 63.158 0.00 0.00 40.03 5.73
1664 5679 4.142093 GCTTGTGGGTGAGATAATGCAAAT 60.142 41.667 0.00 0.00 0.00 2.32
1666 5681 2.754552 GCTTGTGGGTGAGATAATGCAA 59.245 45.455 0.00 0.00 0.00 4.08
1719 5734 1.346395 ACAGGTATGTTTCGGTGAGCA 59.654 47.619 0.00 0.00 35.63 4.26
1723 5738 1.278127 AGGGACAGGTATGTTTCGGTG 59.722 52.381 0.00 0.00 40.68 4.94
1724 5739 1.278127 CAGGGACAGGTATGTTTCGGT 59.722 52.381 0.00 0.00 40.68 4.69
2111 6129 1.283736 CGGCACATACGGAAGGTAAC 58.716 55.000 0.00 0.00 34.09 2.50
2112 6130 0.896923 ACGGCACATACGGAAGGTAA 59.103 50.000 0.00 0.00 34.09 2.85
2115 6133 0.672401 ACAACGGCACATACGGAAGG 60.672 55.000 0.00 0.00 35.23 3.46
2130 6148 5.993106 AAGCTTGTAACTCTGAGAACAAC 57.007 39.130 19.16 16.44 0.00 3.32
2158 6176 9.583765 GCGTACTATATATTAAGAAGGAAAGGG 57.416 37.037 0.00 0.00 0.00 3.95
2162 6180 9.903682 GTGTGCGTACTATATATTAAGAAGGAA 57.096 33.333 4.97 0.00 0.00 3.36
2163 6181 9.293404 AGTGTGCGTACTATATATTAAGAAGGA 57.707 33.333 4.97 0.00 0.00 3.36
2164 6182 9.557338 GAGTGTGCGTACTATATATTAAGAAGG 57.443 37.037 4.97 0.00 0.00 3.46
2168 6186 8.799091 GCATGAGTGTGCGTACTATATATTAAG 58.201 37.037 4.97 0.00 35.10 1.85
2169 6187 8.683550 GCATGAGTGTGCGTACTATATATTAA 57.316 34.615 4.97 0.00 35.10 1.40
2172 6190 8.633561 ATATGCATGAGTGTGCGTACTATATAT 58.366 33.333 10.16 0.00 46.12 0.86
2173 6191 7.996385 ATATGCATGAGTGTGCGTACTATATA 58.004 34.615 10.16 0.00 46.12 0.86
2174 6192 6.867550 ATATGCATGAGTGTGCGTACTATAT 58.132 36.000 10.16 0.00 46.12 0.86
2175 6193 6.267496 ATATGCATGAGTGTGCGTACTATA 57.733 37.500 10.16 0.00 46.12 1.31
2176 6194 5.139435 ATATGCATGAGTGTGCGTACTAT 57.861 39.130 10.16 0.00 46.12 2.12
2177 6195 4.584327 ATATGCATGAGTGTGCGTACTA 57.416 40.909 10.16 0.00 46.12 1.82
2178 6196 3.459232 ATATGCATGAGTGTGCGTACT 57.541 42.857 10.16 0.00 46.12 2.73
2179 6197 3.362014 CGAATATGCATGAGTGTGCGTAC 60.362 47.826 10.16 0.00 46.12 3.67
2183 6201 3.126073 TCTCGAATATGCATGAGTGTGC 58.874 45.455 10.16 0.00 45.25 4.57
2184 6202 5.723492 TTTCTCGAATATGCATGAGTGTG 57.277 39.130 10.16 0.00 0.00 3.82
2185 6203 6.741992 TTTTTCTCGAATATGCATGAGTGT 57.258 33.333 10.16 0.00 0.00 3.55
2209 6227 5.719173 TGTGCAAAGCTTGTAACTCTTTTT 58.281 33.333 0.00 0.00 0.00 1.94
2210 6228 5.323371 TGTGCAAAGCTTGTAACTCTTTT 57.677 34.783 0.00 0.00 0.00 2.27
2211 6229 4.981806 TGTGCAAAGCTTGTAACTCTTT 57.018 36.364 0.00 0.00 0.00 2.52
2212 6230 6.430925 TCATATGTGCAAAGCTTGTAACTCTT 59.569 34.615 0.00 0.00 0.00 2.85
2213 6231 5.939883 TCATATGTGCAAAGCTTGTAACTCT 59.060 36.000 0.00 0.00 0.00 3.24
2214 6232 6.024049 GTCATATGTGCAAAGCTTGTAACTC 58.976 40.000 0.00 0.00 0.00 3.01
2215 6233 5.473162 TGTCATATGTGCAAAGCTTGTAACT 59.527 36.000 0.00 0.00 0.00 2.24
2216 6234 5.698832 TGTCATATGTGCAAAGCTTGTAAC 58.301 37.500 0.00 0.00 0.00 2.50
2217 6235 5.956068 TGTCATATGTGCAAAGCTTGTAA 57.044 34.783 0.00 0.00 0.00 2.41
2218 6236 5.240403 TGTTGTCATATGTGCAAAGCTTGTA 59.760 36.000 0.00 0.00 0.00 2.41
2219 6237 4.037803 TGTTGTCATATGTGCAAAGCTTGT 59.962 37.500 0.00 0.00 0.00 3.16
2220 6238 4.548494 TGTTGTCATATGTGCAAAGCTTG 58.452 39.130 0.00 0.00 0.00 4.01
2221 6239 4.852134 TGTTGTCATATGTGCAAAGCTT 57.148 36.364 13.88 0.00 0.00 3.74
2222 6240 4.852134 TTGTTGTCATATGTGCAAAGCT 57.148 36.364 13.88 0.00 0.00 3.74
2223 6241 6.324819 AGTATTGTTGTCATATGTGCAAAGC 58.675 36.000 13.88 6.70 0.00 3.51
2224 6242 8.165212 CAAGTATTGTTGTCATATGTGCAAAG 57.835 34.615 13.88 0.00 42.34 2.77
2440 6460 1.573829 TTGTCGAGAACCATTGCCGC 61.574 55.000 0.00 0.00 0.00 6.53
2442 6462 1.234821 TGTTGTCGAGAACCATTGCC 58.765 50.000 21.31 0.00 0.00 4.52
2565 6595 2.156098 TCCCACAACCGCAAATAGAAC 58.844 47.619 0.00 0.00 0.00 3.01
2576 6606 4.718961 AGATGCTTATACATCCCACAACC 58.281 43.478 1.06 0.00 46.29 3.77
2627 6657 9.768215 ATCCAAACTCCAAAGGAATAGAAAATA 57.232 29.630 0.00 0.00 33.17 1.40
2628 6658 8.534496 CATCCAAACTCCAAAGGAATAGAAAAT 58.466 33.333 0.00 0.00 33.17 1.82
2631 6661 6.789268 TCATCCAAACTCCAAAGGAATAGAA 58.211 36.000 0.00 0.00 33.17 2.10
2635 6665 5.644188 TCTTCATCCAAACTCCAAAGGAAT 58.356 37.500 0.00 0.00 33.17 3.01
2636 6666 5.060427 TCTTCATCCAAACTCCAAAGGAA 57.940 39.130 0.00 0.00 33.17 3.36
2732 6803 0.968393 GAGGGCTGACGGAGAGAAGT 60.968 60.000 0.00 0.00 0.00 3.01
2764 6842 1.754803 CAGGAGAGCCCACATACGTAA 59.245 52.381 0.00 0.00 37.41 3.18
2813 6891 5.163612 ACAACTTTTTCTCCTTTGCACTCTC 60.164 40.000 0.00 0.00 0.00 3.20
2900 6982 5.042463 TCCGCCAAGGTTAATTCATCATA 57.958 39.130 0.00 0.00 41.99 2.15
2934 7016 2.076100 TGATCACTAACAAAGGCAGCG 58.924 47.619 0.00 0.00 0.00 5.18
2970 7067 4.452114 TGTTTGATCAGATTGTTCTCCACG 59.548 41.667 0.00 0.00 0.00 4.94
2971 7068 5.947228 TGTTTGATCAGATTGTTCTCCAC 57.053 39.130 0.00 0.00 0.00 4.02
2987 7084 9.598517 AAAGATTCAGTAAAATTGCTTGTTTGA 57.401 25.926 0.00 0.00 0.00 2.69
3017 7114 7.993183 TGGATAAGGGTTCTTCAAATGATAGTC 59.007 37.037 0.00 0.00 34.59 2.59
3021 7118 6.131961 CCTGGATAAGGGTTCTTCAAATGAT 58.868 40.000 0.00 0.00 43.15 2.45
3023 7120 5.841957 CCTGGATAAGGGTTCTTCAAATG 57.158 43.478 0.00 0.00 43.15 2.32
3059 7156 4.109766 CCACTCACGATTAAACTATGCGA 58.890 43.478 0.00 0.00 0.00 5.10
3062 7242 6.106673 ACTTCCCACTCACGATTAAACTATG 58.893 40.000 0.00 0.00 0.00 2.23
3065 7245 4.618920 ACTTCCCACTCACGATTAAACT 57.381 40.909 0.00 0.00 0.00 2.66
3070 7250 8.190326 TGAATATATACTTCCCACTCACGATT 57.810 34.615 0.00 0.00 0.00 3.34
3107 7287 6.018589 TGTGAGCTAGAGTGTATATCATGC 57.981 41.667 0.00 0.00 0.00 4.06
3122 7302 5.213891 TCACACTTTTCTGATGTGAGCTA 57.786 39.130 7.53 0.00 45.89 3.32
3123 7303 4.077300 TCACACTTTTCTGATGTGAGCT 57.923 40.909 7.53 0.00 45.89 4.09
3126 7306 6.487668 ACATCATTCACACTTTTCTGATGTGA 59.512 34.615 13.45 7.53 46.76 3.58
3127 7307 6.675026 ACATCATTCACACTTTTCTGATGTG 58.325 36.000 13.45 3.33 46.76 3.21
3128 7308 6.889301 ACATCATTCACACTTTTCTGATGT 57.111 33.333 9.51 9.51 44.93 3.06
3129 7309 7.913821 CCATACATCATTCACACTTTTCTGATG 59.086 37.037 8.38 8.38 43.41 3.07
3130 7310 7.830697 TCCATACATCATTCACACTTTTCTGAT 59.169 33.333 0.00 0.00 0.00 2.90
3131 7311 7.167535 TCCATACATCATTCACACTTTTCTGA 58.832 34.615 0.00 0.00 0.00 3.27
3132 7312 7.381766 TCCATACATCATTCACACTTTTCTG 57.618 36.000 0.00 0.00 0.00 3.02
3133 7313 8.299570 GTTTCCATACATCATTCACACTTTTCT 58.700 33.333 0.00 0.00 0.00 2.52
3134 7314 7.271223 CGTTTCCATACATCATTCACACTTTTC 59.729 37.037 0.00 0.00 0.00 2.29
3135 7315 7.040755 TCGTTTCCATACATCATTCACACTTTT 60.041 33.333 0.00 0.00 0.00 2.27
3136 7316 6.429692 TCGTTTCCATACATCATTCACACTTT 59.570 34.615 0.00 0.00 0.00 2.66
3137 7317 5.937540 TCGTTTCCATACATCATTCACACTT 59.062 36.000 0.00 0.00 0.00 3.16
3138 7318 5.487433 TCGTTTCCATACATCATTCACACT 58.513 37.500 0.00 0.00 0.00 3.55
3139 7319 5.794687 TCGTTTCCATACATCATTCACAC 57.205 39.130 0.00 0.00 0.00 3.82
3140 7320 5.937540 ACTTCGTTTCCATACATCATTCACA 59.062 36.000 0.00 0.00 0.00 3.58
3141 7321 6.422776 ACTTCGTTTCCATACATCATTCAC 57.577 37.500 0.00 0.00 0.00 3.18
3142 7322 6.128035 CCAACTTCGTTTCCATACATCATTCA 60.128 38.462 0.00 0.00 0.00 2.57
3143 7323 6.258160 CCAACTTCGTTTCCATACATCATTC 58.742 40.000 0.00 0.00 0.00 2.67
3144 7324 5.393027 GCCAACTTCGTTTCCATACATCATT 60.393 40.000 0.00 0.00 0.00 2.57
3145 7325 4.096382 GCCAACTTCGTTTCCATACATCAT 59.904 41.667 0.00 0.00 0.00 2.45
3146 7326 3.438781 GCCAACTTCGTTTCCATACATCA 59.561 43.478 0.00 0.00 0.00 3.07
3147 7327 3.438781 TGCCAACTTCGTTTCCATACATC 59.561 43.478 0.00 0.00 0.00 3.06
3148 7328 3.417101 TGCCAACTTCGTTTCCATACAT 58.583 40.909 0.00 0.00 0.00 2.29
3149 7329 2.852449 TGCCAACTTCGTTTCCATACA 58.148 42.857 0.00 0.00 0.00 2.29
3150 7330 3.190535 ACATGCCAACTTCGTTTCCATAC 59.809 43.478 0.00 0.00 0.00 2.39
3151 7331 3.417101 ACATGCCAACTTCGTTTCCATA 58.583 40.909 0.00 0.00 0.00 2.74
3152 7332 2.238521 ACATGCCAACTTCGTTTCCAT 58.761 42.857 0.00 0.00 0.00 3.41
3153 7333 1.686355 ACATGCCAACTTCGTTTCCA 58.314 45.000 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.