Multiple sequence alignment - TraesCS1B01G081700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G081700 chr1B 100.000 2441 0 0 1 2441 64432014 64429574 0.000000e+00 4508
1 TraesCS1B01G081700 chr1B 94.461 1986 77 14 463 2441 64281962 64280003 0.000000e+00 3027
2 TraesCS1B01G081700 chr1B 93.229 1979 115 7 463 2441 63969533 63967574 0.000000e+00 2894
3 TraesCS1B01G081700 chr1B 91.383 441 34 3 6 442 64445446 64445006 3.470000e-168 601
4 TraesCS1B01G081700 chr1D 92.992 1798 126 0 644 2441 44652003 44650206 0.000000e+00 2623
5 TraesCS1B01G081700 chr6B 80.707 1783 305 27 667 2434 156689111 156687353 0.000000e+00 1351
6 TraesCS1B01G081700 chr6B 92.483 439 32 1 1 438 178662684 178663122 5.730000e-176 627
7 TraesCS1B01G081700 chr6B 91.553 438 36 1 1 437 107814293 107813856 9.660000e-169 603
8 TraesCS1B01G081700 chr6B 91.475 434 37 0 1 434 178649997 178650430 4.490000e-167 597
9 TraesCS1B01G081700 chr6B 91.076 437 39 0 1 437 107777334 107776898 2.090000e-165 592
10 TraesCS1B01G081700 chr5B 92.009 438 33 2 1 437 415815406 415814970 4.460000e-172 614
11 TraesCS1B01G081700 chr5B 91.244 434 36 2 1 434 366220587 366221018 7.520000e-165 590
12 TraesCS1B01G081700 chr5B 91.244 434 36 2 1 434 634415678 634415247 7.520000e-165 590
13 TraesCS1B01G081700 chr7B 91.954 435 34 1 1 434 494513182 494513616 2.080000e-170 608
14 TraesCS1B01G081700 chr6D 87.755 98 12 0 437 534 394613581 394613678 5.520000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G081700 chr1B 64429574 64432014 2440 True 4508 4508 100.000 1 2441 1 chr1B.!!$R3 2440
1 TraesCS1B01G081700 chr1B 64280003 64281962 1959 True 3027 3027 94.461 463 2441 1 chr1B.!!$R2 1978
2 TraesCS1B01G081700 chr1B 63967574 63969533 1959 True 2894 2894 93.229 463 2441 1 chr1B.!!$R1 1978
3 TraesCS1B01G081700 chr1D 44650206 44652003 1797 True 2623 2623 92.992 644 2441 1 chr1D.!!$R1 1797
4 TraesCS1B01G081700 chr6B 156687353 156689111 1758 True 1351 1351 80.707 667 2434 1 chr6B.!!$R3 1767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
208 209 0.03759 AGGAACGCTTGCCCATTACA 59.962 50.0 0.0 0.0 0.0 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1718 1735 0.610232 AGCCCAATTCTGCAGGTGAC 60.61 55.0 15.13 5.98 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.808728 AGGTGGTCGATTGGATTATGTG 58.191 45.455 0.00 0.00 0.00 3.21
22 23 3.199946 AGGTGGTCGATTGGATTATGTGT 59.800 43.478 0.00 0.00 0.00 3.72
23 24 3.312421 GGTGGTCGATTGGATTATGTGTG 59.688 47.826 0.00 0.00 0.00 3.82
24 25 3.938963 GTGGTCGATTGGATTATGTGTGT 59.061 43.478 0.00 0.00 0.00 3.72
25 26 3.938334 TGGTCGATTGGATTATGTGTGTG 59.062 43.478 0.00 0.00 0.00 3.82
26 27 4.188462 GGTCGATTGGATTATGTGTGTGA 58.812 43.478 0.00 0.00 0.00 3.58
27 28 4.816385 GGTCGATTGGATTATGTGTGTGAT 59.184 41.667 0.00 0.00 0.00 3.06
28 29 5.989168 GGTCGATTGGATTATGTGTGTGATA 59.011 40.000 0.00 0.00 0.00 2.15
29 30 6.650807 GGTCGATTGGATTATGTGTGTGATAT 59.349 38.462 0.00 0.00 0.00 1.63
30 31 7.173218 GGTCGATTGGATTATGTGTGTGATATT 59.827 37.037 0.00 0.00 0.00 1.28
31 32 9.203421 GTCGATTGGATTATGTGTGTGATATTA 57.797 33.333 0.00 0.00 0.00 0.98
32 33 9.203421 TCGATTGGATTATGTGTGTGATATTAC 57.797 33.333 0.00 0.00 0.00 1.89
33 34 8.987890 CGATTGGATTATGTGTGTGATATTACA 58.012 33.333 0.00 0.00 0.00 2.41
35 36 8.675705 TTGGATTATGTGTGTGATATTACAGG 57.324 34.615 0.00 0.00 0.00 4.00
36 37 8.028652 TGGATTATGTGTGTGATATTACAGGA 57.971 34.615 0.00 0.00 0.00 3.86
37 38 8.659527 TGGATTATGTGTGTGATATTACAGGAT 58.340 33.333 0.00 0.00 0.00 3.24
38 39 8.939929 GGATTATGTGTGTGATATTACAGGATG 58.060 37.037 0.00 0.00 46.00 3.51
49 50 4.722193 CAGGATGTGCGAACCCTT 57.278 55.556 0.00 0.00 0.00 3.95
50 51 2.174334 CAGGATGTGCGAACCCTTG 58.826 57.895 0.00 0.00 0.00 3.61
51 52 0.606401 CAGGATGTGCGAACCCTTGT 60.606 55.000 0.00 0.00 0.00 3.16
52 53 0.321653 AGGATGTGCGAACCCTTGTC 60.322 55.000 0.00 0.00 0.00 3.18
53 54 1.305930 GGATGTGCGAACCCTTGTCC 61.306 60.000 0.00 0.00 0.00 4.02
54 55 1.303317 ATGTGCGAACCCTTGTCCC 60.303 57.895 0.00 0.00 0.00 4.46
55 56 2.063015 ATGTGCGAACCCTTGTCCCA 62.063 55.000 0.00 0.00 0.00 4.37
56 57 1.966451 GTGCGAACCCTTGTCCCAG 60.966 63.158 0.00 0.00 0.00 4.45
57 58 2.144078 TGCGAACCCTTGTCCCAGA 61.144 57.895 0.00 0.00 0.00 3.86
58 59 1.376037 GCGAACCCTTGTCCCAGAG 60.376 63.158 0.00 0.00 0.00 3.35
59 60 1.296715 CGAACCCTTGTCCCAGAGG 59.703 63.158 0.00 0.00 0.00 3.69
60 61 1.192146 CGAACCCTTGTCCCAGAGGA 61.192 60.000 0.00 0.00 41.08 3.71
61 62 0.615850 GAACCCTTGTCCCAGAGGAG 59.384 60.000 0.00 0.00 45.21 3.69
62 63 0.842467 AACCCTTGTCCCAGAGGAGG 60.842 60.000 0.00 0.00 45.21 4.30
69 70 4.354943 CCCAGAGGAGGGGGTGGT 62.355 72.222 0.00 0.00 45.60 4.16
70 71 2.204151 CCAGAGGAGGGGGTGGTT 60.204 66.667 0.00 0.00 0.00 3.67
71 72 1.852626 CCAGAGGAGGGGGTGGTTT 60.853 63.158 0.00 0.00 0.00 3.27
72 73 0.549169 CCAGAGGAGGGGGTGGTTTA 60.549 60.000 0.00 0.00 0.00 2.01
73 74 1.596496 CAGAGGAGGGGGTGGTTTAT 58.404 55.000 0.00 0.00 0.00 1.40
74 75 2.631268 CCAGAGGAGGGGGTGGTTTATA 60.631 54.545 0.00 0.00 0.00 0.98
75 76 3.327439 CAGAGGAGGGGGTGGTTTATAT 58.673 50.000 0.00 0.00 0.00 0.86
76 77 4.499472 CAGAGGAGGGGGTGGTTTATATA 58.501 47.826 0.00 0.00 0.00 0.86
77 78 4.532521 CAGAGGAGGGGGTGGTTTATATAG 59.467 50.000 0.00 0.00 0.00 1.31
78 79 4.426023 AGAGGAGGGGGTGGTTTATATAGA 59.574 45.833 0.00 0.00 0.00 1.98
79 80 4.764491 AGGAGGGGGTGGTTTATATAGAG 58.236 47.826 0.00 0.00 0.00 2.43
80 81 4.174253 AGGAGGGGGTGGTTTATATAGAGT 59.826 45.833 0.00 0.00 0.00 3.24
81 82 4.286291 GGAGGGGGTGGTTTATATAGAGTG 59.714 50.000 0.00 0.00 0.00 3.51
82 83 3.651423 AGGGGGTGGTTTATATAGAGTGC 59.349 47.826 0.00 0.00 0.00 4.40
83 84 3.393278 GGGGGTGGTTTATATAGAGTGCA 59.607 47.826 0.00 0.00 0.00 4.57
84 85 4.386711 GGGGTGGTTTATATAGAGTGCAC 58.613 47.826 9.40 9.40 0.00 4.57
85 86 4.386711 GGGTGGTTTATATAGAGTGCACC 58.613 47.826 14.63 5.12 0.00 5.01
86 87 4.141574 GGGTGGTTTATATAGAGTGCACCA 60.142 45.833 14.63 0.00 0.00 4.17
87 88 5.057149 GGTGGTTTATATAGAGTGCACCAG 58.943 45.833 14.63 0.00 33.49 4.00
88 89 5.057149 GTGGTTTATATAGAGTGCACCAGG 58.943 45.833 14.63 0.00 33.49 4.45
89 90 4.966168 TGGTTTATATAGAGTGCACCAGGA 59.034 41.667 14.63 0.00 0.00 3.86
90 91 5.163343 TGGTTTATATAGAGTGCACCAGGAC 60.163 44.000 14.63 0.31 36.16 3.85
91 92 5.298347 GTTTATATAGAGTGCACCAGGACC 58.702 45.833 14.63 0.00 36.65 4.46
92 93 1.789523 TATAGAGTGCACCAGGACCC 58.210 55.000 14.63 0.00 36.65 4.46
93 94 0.983378 ATAGAGTGCACCAGGACCCC 60.983 60.000 14.63 0.00 36.65 4.95
94 95 2.395180 TAGAGTGCACCAGGACCCCA 62.395 60.000 14.63 0.00 36.65 4.96
95 96 3.252284 AGTGCACCAGGACCCCAG 61.252 66.667 14.63 0.00 36.65 4.45
99 100 3.341629 CACCAGGACCCCAGCCAT 61.342 66.667 0.00 0.00 0.00 4.40
100 101 3.017581 ACCAGGACCCCAGCCATC 61.018 66.667 0.00 0.00 0.00 3.51
101 102 3.813724 CCAGGACCCCAGCCATCC 61.814 72.222 0.00 0.00 0.00 3.51
102 103 2.693864 CAGGACCCCAGCCATCCT 60.694 66.667 0.00 0.00 43.95 3.24
103 104 2.367512 AGGACCCCAGCCATCCTC 60.368 66.667 0.00 0.00 38.55 3.71
104 105 3.493303 GGACCCCAGCCATCCTCC 61.493 72.222 0.00 0.00 0.00 4.30
105 106 2.692368 GACCCCAGCCATCCTCCA 60.692 66.667 0.00 0.00 0.00 3.86
106 107 2.045132 ACCCCAGCCATCCTCCAT 59.955 61.111 0.00 0.00 0.00 3.41
107 108 1.623686 ACCCCAGCCATCCTCCATT 60.624 57.895 0.00 0.00 0.00 3.16
108 109 0.328450 ACCCCAGCCATCCTCCATTA 60.328 55.000 0.00 0.00 0.00 1.90
109 110 0.111253 CCCCAGCCATCCTCCATTAC 59.889 60.000 0.00 0.00 0.00 1.89
110 111 0.846015 CCCAGCCATCCTCCATTACA 59.154 55.000 0.00 0.00 0.00 2.41
111 112 1.426598 CCCAGCCATCCTCCATTACAT 59.573 52.381 0.00 0.00 0.00 2.29
112 113 2.511659 CCAGCCATCCTCCATTACATG 58.488 52.381 0.00 0.00 0.00 3.21
126 127 6.067263 CCATTACATGGGGTTTAATGTACG 57.933 41.667 0.00 0.00 46.86 3.67
127 128 5.591067 CCATTACATGGGGTTTAATGTACGT 59.409 40.000 0.00 0.00 46.86 3.57
128 129 6.766944 CCATTACATGGGGTTTAATGTACGTA 59.233 38.462 0.00 0.00 46.86 3.57
129 130 7.282675 CCATTACATGGGGTTTAATGTACGTAA 59.717 37.037 0.00 0.00 46.86 3.18
130 131 8.675504 CATTACATGGGGTTTAATGTACGTAAA 58.324 33.333 0.00 0.00 38.62 2.01
131 132 6.746745 ACATGGGGTTTAATGTACGTAAAG 57.253 37.500 0.00 0.00 35.28 1.85
132 133 6.240145 ACATGGGGTTTAATGTACGTAAAGT 58.760 36.000 0.00 0.00 35.28 2.66
133 134 7.393216 ACATGGGGTTTAATGTACGTAAAGTA 58.607 34.615 0.00 0.00 35.28 2.24
134 135 7.550196 ACATGGGGTTTAATGTACGTAAAGTAG 59.450 37.037 0.00 0.00 35.28 2.57
135 136 6.405538 TGGGGTTTAATGTACGTAAAGTAGG 58.594 40.000 0.00 0.00 35.72 3.18
136 137 5.817296 GGGGTTTAATGTACGTAAAGTAGGG 59.183 44.000 0.00 0.00 35.72 3.53
137 138 5.817296 GGGTTTAATGTACGTAAAGTAGGGG 59.183 44.000 0.00 0.00 35.72 4.79
138 139 5.294306 GGTTTAATGTACGTAAAGTAGGGGC 59.706 44.000 0.00 0.00 35.72 5.80
139 140 5.674052 TTAATGTACGTAAAGTAGGGGCA 57.326 39.130 0.00 0.00 35.72 5.36
140 141 4.765813 AATGTACGTAAAGTAGGGGCAT 57.234 40.909 0.00 0.00 35.72 4.40
141 142 4.765813 ATGTACGTAAAGTAGGGGCATT 57.234 40.909 0.00 0.00 35.72 3.56
142 143 5.874897 ATGTACGTAAAGTAGGGGCATTA 57.125 39.130 0.00 0.00 35.72 1.90
143 144 5.009854 TGTACGTAAAGTAGGGGCATTAC 57.990 43.478 0.00 0.00 35.72 1.89
144 145 4.465660 TGTACGTAAAGTAGGGGCATTACA 59.534 41.667 0.00 0.00 35.72 2.41
145 146 4.133013 ACGTAAAGTAGGGGCATTACAG 57.867 45.455 0.00 0.00 0.00 2.74
146 147 3.118519 ACGTAAAGTAGGGGCATTACAGG 60.119 47.826 0.00 0.00 0.00 4.00
147 148 3.118519 CGTAAAGTAGGGGCATTACAGGT 60.119 47.826 0.00 0.00 0.00 4.00
148 149 4.099881 CGTAAAGTAGGGGCATTACAGGTA 59.900 45.833 0.00 0.00 0.00 3.08
149 150 5.395546 CGTAAAGTAGGGGCATTACAGGTAA 60.396 44.000 0.00 0.00 0.00 2.85
150 151 4.498894 AAGTAGGGGCATTACAGGTAAC 57.501 45.455 0.00 0.00 0.00 2.50
151 152 2.433239 AGTAGGGGCATTACAGGTAACG 59.567 50.000 0.00 0.00 46.39 3.18
152 153 0.107361 AGGGGCATTACAGGTAACGC 60.107 55.000 1.89 1.89 46.39 4.84
157 158 1.602377 GCATTACAGGTAACGCCATCC 59.398 52.381 0.00 0.00 46.39 3.51
158 159 2.745152 GCATTACAGGTAACGCCATCCT 60.745 50.000 0.00 0.00 46.39 3.24
159 160 3.541632 CATTACAGGTAACGCCATCCTT 58.458 45.455 0.00 0.00 46.39 3.36
160 161 4.699637 CATTACAGGTAACGCCATCCTTA 58.300 43.478 0.00 0.00 46.39 2.69
161 162 4.822685 TTACAGGTAACGCCATCCTTAA 57.177 40.909 0.00 0.00 46.39 1.85
162 163 3.926058 ACAGGTAACGCCATCCTTAAT 57.074 42.857 0.00 0.00 46.39 1.40
163 164 3.541632 ACAGGTAACGCCATCCTTAATG 58.458 45.455 0.00 0.00 46.39 1.90
164 165 2.290641 CAGGTAACGCCATCCTTAATGC 59.709 50.000 0.00 0.00 46.39 3.56
165 166 2.172717 AGGTAACGCCATCCTTAATGCT 59.827 45.455 0.00 0.00 46.39 3.79
166 167 3.389983 AGGTAACGCCATCCTTAATGCTA 59.610 43.478 0.00 0.00 46.39 3.49
167 168 4.041691 AGGTAACGCCATCCTTAATGCTAT 59.958 41.667 0.00 0.00 46.39 2.97
168 169 4.760204 GGTAACGCCATCCTTAATGCTATT 59.240 41.667 0.00 0.00 37.17 1.73
169 170 4.836125 AACGCCATCCTTAATGCTATTG 57.164 40.909 0.00 0.00 33.71 1.90
170 171 4.085357 ACGCCATCCTTAATGCTATTGA 57.915 40.909 0.00 0.00 33.71 2.57
171 172 4.655963 ACGCCATCCTTAATGCTATTGAT 58.344 39.130 0.00 0.00 33.71 2.57
172 173 4.456911 ACGCCATCCTTAATGCTATTGATG 59.543 41.667 0.00 0.00 33.71 3.07
173 174 4.696877 CGCCATCCTTAATGCTATTGATGA 59.303 41.667 0.00 0.00 33.20 2.92
174 175 5.391310 CGCCATCCTTAATGCTATTGATGAC 60.391 44.000 0.00 0.00 33.20 3.06
175 176 5.105997 GCCATCCTTAATGCTATTGATGACC 60.106 44.000 0.00 0.00 33.20 4.02
176 177 6.243900 CCATCCTTAATGCTATTGATGACCT 58.756 40.000 0.00 0.00 33.20 3.85
177 178 6.718454 CCATCCTTAATGCTATTGATGACCTT 59.282 38.462 0.00 0.00 33.20 3.50
178 179 7.884877 CCATCCTTAATGCTATTGATGACCTTA 59.115 37.037 0.00 0.00 33.20 2.69
179 180 9.288576 CATCCTTAATGCTATTGATGACCTTAA 57.711 33.333 0.00 0.00 33.20 1.85
180 181 9.866655 ATCCTTAATGCTATTGATGACCTTAAA 57.133 29.630 0.00 0.00 0.00 1.52
181 182 9.342308 TCCTTAATGCTATTGATGACCTTAAAG 57.658 33.333 0.00 0.00 0.00 1.85
182 183 9.342308 CCTTAATGCTATTGATGACCTTAAAGA 57.658 33.333 0.00 0.00 0.00 2.52
184 185 9.905713 TTAATGCTATTGATGACCTTAAAGACT 57.094 29.630 0.00 0.00 0.00 3.24
187 188 8.893219 TGCTATTGATGACCTTAAAGACTATG 57.107 34.615 0.00 0.00 0.00 2.23
188 189 7.933577 TGCTATTGATGACCTTAAAGACTATGG 59.066 37.037 0.00 0.00 0.00 2.74
189 190 8.150945 GCTATTGATGACCTTAAAGACTATGGA 58.849 37.037 0.00 0.00 0.00 3.41
190 191 9.703892 CTATTGATGACCTTAAAGACTATGGAG 57.296 37.037 0.00 0.00 0.00 3.86
191 192 6.485830 TGATGACCTTAAAGACTATGGAGG 57.514 41.667 0.00 0.00 0.00 4.30
192 193 6.202331 TGATGACCTTAAAGACTATGGAGGA 58.798 40.000 0.00 0.00 0.00 3.71
193 194 6.672218 TGATGACCTTAAAGACTATGGAGGAA 59.328 38.462 0.00 0.00 0.00 3.36
194 195 6.295719 TGACCTTAAAGACTATGGAGGAAC 57.704 41.667 0.00 0.00 0.00 3.62
195 196 5.105473 TGACCTTAAAGACTATGGAGGAACG 60.105 44.000 0.00 0.00 0.00 3.95
196 197 4.120589 CCTTAAAGACTATGGAGGAACGC 58.879 47.826 0.00 0.00 0.00 4.84
197 198 4.141914 CCTTAAAGACTATGGAGGAACGCT 60.142 45.833 0.00 0.00 0.00 5.07
198 199 3.983044 AAAGACTATGGAGGAACGCTT 57.017 42.857 0.00 0.00 0.00 4.68
199 200 2.969628 AGACTATGGAGGAACGCTTG 57.030 50.000 0.00 0.00 0.00 4.01
200 201 1.134670 AGACTATGGAGGAACGCTTGC 60.135 52.381 0.00 0.00 0.00 4.01
201 202 0.107654 ACTATGGAGGAACGCTTGCC 60.108 55.000 0.00 0.00 0.00 4.52
202 203 0.815615 CTATGGAGGAACGCTTGCCC 60.816 60.000 0.00 0.00 0.00 5.36
203 204 1.558167 TATGGAGGAACGCTTGCCCA 61.558 55.000 0.00 0.00 0.00 5.36
204 205 2.044946 GGAGGAACGCTTGCCCAT 60.045 61.111 0.00 0.00 0.00 4.00
205 206 1.678970 GGAGGAACGCTTGCCCATT 60.679 57.895 0.00 0.00 0.00 3.16
206 207 0.393808 GGAGGAACGCTTGCCCATTA 60.394 55.000 0.00 0.00 0.00 1.90
207 208 0.733150 GAGGAACGCTTGCCCATTAC 59.267 55.000 0.00 0.00 0.00 1.89
208 209 0.037590 AGGAACGCTTGCCCATTACA 59.962 50.000 0.00 0.00 0.00 2.41
209 210 0.885196 GGAACGCTTGCCCATTACAA 59.115 50.000 0.00 0.00 0.00 2.41
210 211 1.476488 GGAACGCTTGCCCATTACAAT 59.524 47.619 0.00 0.00 0.00 2.71
211 212 2.529151 GAACGCTTGCCCATTACAATG 58.471 47.619 0.00 0.00 36.17 2.82
212 213 1.544724 ACGCTTGCCCATTACAATGT 58.455 45.000 0.00 0.00 34.60 2.71
213 214 1.892474 ACGCTTGCCCATTACAATGTT 59.108 42.857 0.00 0.00 34.60 2.71
214 215 2.261345 CGCTTGCCCATTACAATGTTG 58.739 47.619 0.00 0.00 34.60 3.33
215 216 2.094803 CGCTTGCCCATTACAATGTTGA 60.095 45.455 0.00 0.00 34.60 3.18
216 217 3.514645 GCTTGCCCATTACAATGTTGAG 58.485 45.455 0.00 0.00 34.60 3.02
217 218 3.056607 GCTTGCCCATTACAATGTTGAGT 60.057 43.478 0.00 0.00 34.60 3.41
218 219 4.487948 CTTGCCCATTACAATGTTGAGTG 58.512 43.478 0.00 0.00 34.60 3.51
219 220 3.760738 TGCCCATTACAATGTTGAGTGA 58.239 40.909 0.00 0.00 34.60 3.41
220 221 3.505680 TGCCCATTACAATGTTGAGTGAC 59.494 43.478 0.00 0.00 34.60 3.67
221 222 3.758554 GCCCATTACAATGTTGAGTGACT 59.241 43.478 0.00 0.00 34.60 3.41
222 223 4.142600 GCCCATTACAATGTTGAGTGACTC 60.143 45.833 5.47 5.47 34.60 3.36
223 224 5.248640 CCCATTACAATGTTGAGTGACTCT 58.751 41.667 14.42 0.00 34.60 3.24
224 225 5.122869 CCCATTACAATGTTGAGTGACTCTG 59.877 44.000 14.42 5.73 34.60 3.35
225 226 5.122869 CCATTACAATGTTGAGTGACTCTGG 59.877 44.000 14.42 5.07 34.60 3.86
226 227 3.131709 ACAATGTTGAGTGACTCTGGG 57.868 47.619 14.42 0.60 0.00 4.45
227 228 2.439507 ACAATGTTGAGTGACTCTGGGT 59.560 45.455 14.42 1.20 0.00 4.51
228 229 3.070018 CAATGTTGAGTGACTCTGGGTC 58.930 50.000 14.42 0.00 44.70 4.46
229 230 2.088104 TGTTGAGTGACTCTGGGTCT 57.912 50.000 14.42 0.00 44.74 3.85
230 231 2.398588 TGTTGAGTGACTCTGGGTCTT 58.601 47.619 14.42 0.00 44.74 3.01
231 232 2.365617 TGTTGAGTGACTCTGGGTCTTC 59.634 50.000 14.42 7.42 44.74 2.87
232 233 1.248486 TGAGTGACTCTGGGTCTTCG 58.752 55.000 14.42 0.00 44.74 3.79
233 234 0.528470 GAGTGACTCTGGGTCTTCGG 59.472 60.000 9.42 0.00 44.74 4.30
234 235 0.178958 AGTGACTCTGGGTCTTCGGT 60.179 55.000 9.42 0.00 44.74 4.69
235 236 0.680061 GTGACTCTGGGTCTTCGGTT 59.320 55.000 9.42 0.00 44.74 4.44
236 237 1.070289 GTGACTCTGGGTCTTCGGTTT 59.930 52.381 9.42 0.00 44.74 3.27
237 238 1.070134 TGACTCTGGGTCTTCGGTTTG 59.930 52.381 9.42 0.00 44.74 2.93
238 239 0.250338 ACTCTGGGTCTTCGGTTTGC 60.250 55.000 0.00 0.00 0.00 3.68
239 240 0.955919 CTCTGGGTCTTCGGTTTGCC 60.956 60.000 0.00 0.00 0.00 4.52
250 251 2.715536 GGTTTGCCGAGTGTTTCCT 58.284 52.632 0.00 0.00 0.00 3.36
251 252 1.029681 GGTTTGCCGAGTGTTTCCTT 58.970 50.000 0.00 0.00 0.00 3.36
252 253 1.269051 GGTTTGCCGAGTGTTTCCTTG 60.269 52.381 0.00 0.00 0.00 3.61
253 254 1.028905 TTTGCCGAGTGTTTCCTTGG 58.971 50.000 0.00 0.00 38.81 3.61
254 255 0.821711 TTGCCGAGTGTTTCCTTGGG 60.822 55.000 0.00 0.00 36.62 4.12
255 256 1.228154 GCCGAGTGTTTCCTTGGGT 60.228 57.895 0.00 0.00 36.62 4.51
256 257 1.515521 GCCGAGTGTTTCCTTGGGTG 61.516 60.000 0.00 0.00 36.62 4.61
257 258 0.889186 CCGAGTGTTTCCTTGGGTGG 60.889 60.000 0.00 0.00 32.99 4.61
258 259 0.179029 CGAGTGTTTCCTTGGGTGGT 60.179 55.000 0.00 0.00 0.00 4.16
259 260 1.605753 GAGTGTTTCCTTGGGTGGTC 58.394 55.000 0.00 0.00 0.00 4.02
260 261 0.179029 AGTGTTTCCTTGGGTGGTCG 60.179 55.000 0.00 0.00 0.00 4.79
261 262 0.179040 GTGTTTCCTTGGGTGGTCGA 60.179 55.000 0.00 0.00 0.00 4.20
262 263 0.107831 TGTTTCCTTGGGTGGTCGAG 59.892 55.000 0.00 0.00 0.00 4.04
263 264 0.108019 GTTTCCTTGGGTGGTCGAGT 59.892 55.000 0.00 0.00 0.00 4.18
264 265 0.107831 TTTCCTTGGGTGGTCGAGTG 59.892 55.000 0.00 0.00 0.00 3.51
265 266 0.761323 TTCCTTGGGTGGTCGAGTGA 60.761 55.000 0.00 0.00 0.00 3.41
266 267 1.004918 CCTTGGGTGGTCGAGTGAC 60.005 63.158 0.00 0.00 44.72 3.67
278 279 4.555348 GTCGAGTGACAATAGGTAGGAG 57.445 50.000 0.00 0.00 44.82 3.69
279 280 3.315749 GTCGAGTGACAATAGGTAGGAGG 59.684 52.174 0.00 0.00 44.82 4.30
280 281 3.201487 TCGAGTGACAATAGGTAGGAGGA 59.799 47.826 0.00 0.00 0.00 3.71
281 282 3.315749 CGAGTGACAATAGGTAGGAGGAC 59.684 52.174 0.00 0.00 0.00 3.85
282 283 4.538738 GAGTGACAATAGGTAGGAGGACT 58.461 47.826 0.00 0.00 0.00 3.85
283 284 4.538738 AGTGACAATAGGTAGGAGGACTC 58.461 47.826 0.00 0.00 0.00 3.36
292 293 3.605895 GGAGGACTCCCGAGTGAC 58.394 66.667 7.13 0.00 43.94 3.67
293 294 1.304217 GGAGGACTCCCGAGTGACA 60.304 63.158 7.13 0.00 43.94 3.58
294 295 0.684805 GGAGGACTCCCGAGTGACAT 60.685 60.000 7.13 0.00 43.94 3.06
295 296 0.457851 GAGGACTCCCGAGTGACATG 59.542 60.000 1.17 0.00 42.66 3.21
296 297 0.039764 AGGACTCCCGAGTGACATGA 59.960 55.000 1.17 0.00 42.66 3.07
297 298 1.115467 GGACTCCCGAGTGACATGAT 58.885 55.000 1.17 0.00 42.66 2.45
298 299 1.482593 GGACTCCCGAGTGACATGATT 59.517 52.381 1.17 0.00 42.66 2.57
299 300 2.544685 GACTCCCGAGTGACATGATTG 58.455 52.381 1.17 0.00 42.66 2.67
300 301 1.902508 ACTCCCGAGTGACATGATTGT 59.097 47.619 0.00 0.00 40.75 2.71
312 313 5.149054 GACATGATTGTCGAGTGGAATTC 57.851 43.478 0.00 0.00 42.66 2.17
313 314 4.578871 ACATGATTGTCGAGTGGAATTCA 58.421 39.130 7.93 0.00 0.00 2.57
314 315 4.393062 ACATGATTGTCGAGTGGAATTCAC 59.607 41.667 7.93 4.02 46.39 3.18
326 327 4.962693 GTGGAATTCACTCGACATCTTTG 58.037 43.478 7.93 0.00 42.86 2.77
327 328 4.690748 GTGGAATTCACTCGACATCTTTGA 59.309 41.667 7.93 0.00 42.86 2.69
328 329 4.690748 TGGAATTCACTCGACATCTTTGAC 59.309 41.667 7.93 0.00 0.00 3.18
329 330 4.932200 GGAATTCACTCGACATCTTTGACT 59.068 41.667 7.93 0.00 0.00 3.41
330 331 5.163913 GGAATTCACTCGACATCTTTGACTG 60.164 44.000 7.93 0.00 0.00 3.51
331 332 3.303881 TCACTCGACATCTTTGACTGG 57.696 47.619 0.00 0.00 0.00 4.00
332 333 2.029020 TCACTCGACATCTTTGACTGGG 60.029 50.000 0.00 0.00 0.00 4.45
333 334 1.276421 ACTCGACATCTTTGACTGGGG 59.724 52.381 0.00 0.00 0.00 4.96
334 335 0.613260 TCGACATCTTTGACTGGGGG 59.387 55.000 0.00 0.00 0.00 5.40
335 336 0.324943 CGACATCTTTGACTGGGGGT 59.675 55.000 0.00 0.00 0.00 4.95
336 337 1.676014 CGACATCTTTGACTGGGGGTC 60.676 57.143 0.00 0.00 44.70 4.46
337 338 1.630878 GACATCTTTGACTGGGGGTCT 59.369 52.381 0.00 0.00 44.74 3.85
338 339 1.630878 ACATCTTTGACTGGGGGTCTC 59.369 52.381 0.00 0.00 44.74 3.36
339 340 0.905357 ATCTTTGACTGGGGGTCTCG 59.095 55.000 0.00 0.00 44.74 4.04
340 341 0.471211 TCTTTGACTGGGGGTCTCGT 60.471 55.000 0.00 0.00 44.74 4.18
341 342 0.320771 CTTTGACTGGGGGTCTCGTG 60.321 60.000 0.00 0.00 44.74 4.35
342 343 1.052124 TTTGACTGGGGGTCTCGTGT 61.052 55.000 0.00 0.00 44.74 4.49
343 344 1.052124 TTGACTGGGGGTCTCGTGTT 61.052 55.000 0.00 0.00 44.74 3.32
344 345 1.004918 GACTGGGGGTCTCGTGTTG 60.005 63.158 0.00 0.00 41.46 3.33
345 346 1.755393 GACTGGGGGTCTCGTGTTGT 61.755 60.000 0.00 0.00 41.46 3.32
346 347 1.004918 CTGGGGGTCTCGTGTTGTC 60.005 63.158 0.00 0.00 0.00 3.18
347 348 1.458777 TGGGGGTCTCGTGTTGTCT 60.459 57.895 0.00 0.00 0.00 3.41
348 349 1.292541 GGGGGTCTCGTGTTGTCTC 59.707 63.158 0.00 0.00 0.00 3.36
349 350 1.186267 GGGGGTCTCGTGTTGTCTCT 61.186 60.000 0.00 0.00 0.00 3.10
350 351 0.680061 GGGGTCTCGTGTTGTCTCTT 59.320 55.000 0.00 0.00 0.00 2.85
351 352 1.605712 GGGGTCTCGTGTTGTCTCTTG 60.606 57.143 0.00 0.00 0.00 3.02
352 353 1.340248 GGGTCTCGTGTTGTCTCTTGA 59.660 52.381 0.00 0.00 0.00 3.02
353 354 2.223971 GGGTCTCGTGTTGTCTCTTGAA 60.224 50.000 0.00 0.00 0.00 2.69
354 355 2.795470 GGTCTCGTGTTGTCTCTTGAAC 59.205 50.000 0.00 0.00 0.00 3.18
355 356 3.491104 GGTCTCGTGTTGTCTCTTGAACT 60.491 47.826 0.00 0.00 0.00 3.01
356 357 4.113354 GTCTCGTGTTGTCTCTTGAACTT 58.887 43.478 0.00 0.00 0.00 2.66
357 358 4.207429 GTCTCGTGTTGTCTCTTGAACTTC 59.793 45.833 0.00 0.00 0.00 3.01
358 359 4.098044 TCTCGTGTTGTCTCTTGAACTTCT 59.902 41.667 0.00 0.00 0.00 2.85
359 360 4.755411 TCGTGTTGTCTCTTGAACTTCTT 58.245 39.130 0.00 0.00 0.00 2.52
360 361 5.898174 TCGTGTTGTCTCTTGAACTTCTTA 58.102 37.500 0.00 0.00 0.00 2.10
361 362 6.513180 TCGTGTTGTCTCTTGAACTTCTTAT 58.487 36.000 0.00 0.00 0.00 1.73
362 363 6.641314 TCGTGTTGTCTCTTGAACTTCTTATC 59.359 38.462 0.00 0.00 0.00 1.75
363 364 6.128795 CGTGTTGTCTCTTGAACTTCTTATCC 60.129 42.308 0.00 0.00 0.00 2.59
364 365 6.931840 GTGTTGTCTCTTGAACTTCTTATCCT 59.068 38.462 0.00 0.00 0.00 3.24
365 366 7.117092 GTGTTGTCTCTTGAACTTCTTATCCTC 59.883 40.741 0.00 0.00 0.00 3.71
366 367 7.015682 TGTTGTCTCTTGAACTTCTTATCCTCT 59.984 37.037 0.00 0.00 0.00 3.69
367 368 8.524487 GTTGTCTCTTGAACTTCTTATCCTCTA 58.476 37.037 0.00 0.00 0.00 2.43
368 369 8.287439 TGTCTCTTGAACTTCTTATCCTCTAG 57.713 38.462 0.00 0.00 0.00 2.43
369 370 7.340743 TGTCTCTTGAACTTCTTATCCTCTAGG 59.659 40.741 0.00 0.00 0.00 3.02
370 371 6.836527 TCTCTTGAACTTCTTATCCTCTAGGG 59.163 42.308 0.00 0.00 35.41 3.53
371 372 6.503944 TCTTGAACTTCTTATCCTCTAGGGT 58.496 40.000 0.00 0.00 36.25 4.34
372 373 7.649715 TCTTGAACTTCTTATCCTCTAGGGTA 58.350 38.462 0.00 0.00 36.25 3.69
373 374 7.780745 TCTTGAACTTCTTATCCTCTAGGGTAG 59.219 40.741 0.00 0.00 31.36 3.18
374 375 6.374588 TGAACTTCTTATCCTCTAGGGTAGG 58.625 44.000 0.00 0.00 31.36 3.18
375 376 5.342361 ACTTCTTATCCTCTAGGGTAGGG 57.658 47.826 0.00 0.00 31.36 3.53
376 377 4.989545 ACTTCTTATCCTCTAGGGTAGGGA 59.010 45.833 0.00 0.00 31.36 4.20
377 378 5.162958 ACTTCTTATCCTCTAGGGTAGGGAC 60.163 48.000 0.00 0.00 31.36 4.46
378 379 3.661654 TCTTATCCTCTAGGGTAGGGACC 59.338 52.174 0.00 0.00 46.13 4.46
379 380 2.248742 ATCCTCTAGGGTAGGGACCT 57.751 55.000 0.00 0.00 46.09 3.85
380 381 2.012168 TCCTCTAGGGTAGGGACCTT 57.988 55.000 0.00 0.00 46.09 3.50
381 382 1.574339 TCCTCTAGGGTAGGGACCTTG 59.426 57.143 0.00 0.00 46.09 3.61
382 383 1.413227 CCTCTAGGGTAGGGACCTTGG 60.413 61.905 0.00 0.00 46.09 3.61
383 384 0.640495 TCTAGGGTAGGGACCTTGGG 59.360 60.000 0.00 0.00 46.09 4.12
384 385 0.342313 CTAGGGTAGGGACCTTGGGT 59.658 60.000 0.00 0.00 46.09 4.51
385 386 1.577242 CTAGGGTAGGGACCTTGGGTA 59.423 57.143 0.00 0.00 46.09 3.69
386 387 0.342313 AGGGTAGGGACCTTGGGTAG 59.658 60.000 0.00 0.00 46.09 3.18
398 399 3.314541 CTTGGGTAGGACGTATATGCC 57.685 52.381 0.00 0.00 0.00 4.40
399 400 2.385135 TGGGTAGGACGTATATGCCA 57.615 50.000 0.00 0.00 0.00 4.92
400 401 2.244695 TGGGTAGGACGTATATGCCAG 58.755 52.381 0.00 0.00 0.00 4.85
401 402 1.549170 GGGTAGGACGTATATGCCAGG 59.451 57.143 0.00 0.00 0.00 4.45
402 403 1.067071 GGTAGGACGTATATGCCAGGC 60.067 57.143 3.66 3.66 0.00 4.85
403 404 1.067071 GTAGGACGTATATGCCAGGCC 60.067 57.143 9.64 0.00 0.00 5.19
404 405 0.471971 AGGACGTATATGCCAGGCCT 60.472 55.000 9.64 0.00 0.00 5.19
405 406 1.203137 AGGACGTATATGCCAGGCCTA 60.203 52.381 3.98 3.42 0.00 3.93
406 407 1.831736 GGACGTATATGCCAGGCCTAT 59.168 52.381 3.98 11.84 0.00 2.57
407 408 2.418746 GGACGTATATGCCAGGCCTATG 60.419 54.545 17.30 10.41 0.00 2.23
408 409 2.496070 GACGTATATGCCAGGCCTATGA 59.504 50.000 17.30 0.00 0.00 2.15
409 410 2.233922 ACGTATATGCCAGGCCTATGAC 59.766 50.000 17.30 10.99 0.00 3.06
410 411 2.418746 CGTATATGCCAGGCCTATGACC 60.419 54.545 17.30 6.26 0.00 4.02
411 412 0.995024 ATATGCCAGGCCTATGACCC 59.005 55.000 3.98 0.00 0.00 4.46
412 413 0.104462 TATGCCAGGCCTATGACCCT 60.104 55.000 3.98 0.00 0.00 4.34
413 414 0.104462 ATGCCAGGCCTATGACCCTA 60.104 55.000 3.98 0.00 0.00 3.53
414 415 1.054406 TGCCAGGCCTATGACCCTAC 61.054 60.000 3.98 0.00 0.00 3.18
415 416 1.769716 GCCAGGCCTATGACCCTACC 61.770 65.000 3.98 0.00 0.00 3.18
416 417 1.128188 CCAGGCCTATGACCCTACCC 61.128 65.000 3.98 0.00 0.00 3.69
417 418 1.128188 CAGGCCTATGACCCTACCCC 61.128 65.000 3.98 0.00 0.00 4.95
418 419 1.074014 GGCCTATGACCCTACCCCA 60.074 63.158 0.00 0.00 0.00 4.96
419 420 0.696485 GGCCTATGACCCTACCCCAA 60.696 60.000 0.00 0.00 0.00 4.12
420 421 1.218844 GCCTATGACCCTACCCCAAA 58.781 55.000 0.00 0.00 0.00 3.28
421 422 1.780919 GCCTATGACCCTACCCCAAAT 59.219 52.381 0.00 0.00 0.00 2.32
422 423 2.983898 GCCTATGACCCTACCCCAAATA 59.016 50.000 0.00 0.00 0.00 1.40
423 424 3.591977 GCCTATGACCCTACCCCAAATAT 59.408 47.826 0.00 0.00 0.00 1.28
424 425 4.567747 GCCTATGACCCTACCCCAAATATG 60.568 50.000 0.00 0.00 0.00 1.78
425 426 4.601857 CCTATGACCCTACCCCAAATATGT 59.398 45.833 0.00 0.00 0.00 2.29
426 427 5.788533 CCTATGACCCTACCCCAAATATGTA 59.211 44.000 0.00 0.00 0.00 2.29
427 428 6.447084 CCTATGACCCTACCCCAAATATGTAT 59.553 42.308 0.00 0.00 0.00 2.29
428 429 5.836024 TGACCCTACCCCAAATATGTATC 57.164 43.478 0.00 0.00 0.00 2.24
429 430 4.600111 TGACCCTACCCCAAATATGTATCC 59.400 45.833 0.00 0.00 0.00 2.59
430 431 4.850386 GACCCTACCCCAAATATGTATCCT 59.150 45.833 0.00 0.00 0.00 3.24
431 432 4.850386 ACCCTACCCCAAATATGTATCCTC 59.150 45.833 0.00 0.00 0.00 3.71
432 433 4.849810 CCCTACCCCAAATATGTATCCTCA 59.150 45.833 0.00 0.00 0.00 3.86
433 434 5.492524 CCCTACCCCAAATATGTATCCTCAT 59.507 44.000 0.00 0.00 0.00 2.90
434 435 6.011628 CCCTACCCCAAATATGTATCCTCATT 60.012 42.308 0.00 0.00 0.00 2.57
435 436 7.183839 CCCTACCCCAAATATGTATCCTCATTA 59.816 40.741 0.00 0.00 0.00 1.90
436 437 8.267894 CCTACCCCAAATATGTATCCTCATTAG 58.732 40.741 0.00 0.00 0.00 1.73
437 438 7.032598 ACCCCAAATATGTATCCTCATTAGG 57.967 40.000 0.00 0.00 45.21 2.69
438 439 5.888161 CCCCAAATATGTATCCTCATTAGGC 59.112 44.000 0.00 0.00 43.31 3.93
439 440 5.888161 CCCAAATATGTATCCTCATTAGGCC 59.112 44.000 0.00 0.00 43.31 5.19
440 441 5.888161 CCAAATATGTATCCTCATTAGGCCC 59.112 44.000 0.00 0.00 43.31 5.80
441 442 5.717119 AATATGTATCCTCATTAGGCCCC 57.283 43.478 0.00 0.00 43.31 5.80
442 443 2.505672 TGTATCCTCATTAGGCCCCA 57.494 50.000 0.00 0.00 43.31 4.96
443 444 3.004126 TGTATCCTCATTAGGCCCCAT 57.996 47.619 0.00 0.00 43.31 4.00
444 445 2.912956 TGTATCCTCATTAGGCCCCATC 59.087 50.000 0.00 0.00 43.31 3.51
445 446 0.987294 ATCCTCATTAGGCCCCATCG 59.013 55.000 0.00 0.00 43.31 3.84
446 447 1.302832 CCTCATTAGGCCCCATCGC 60.303 63.158 0.00 0.00 35.64 4.58
447 448 1.669115 CTCATTAGGCCCCATCGCG 60.669 63.158 0.00 0.00 0.00 5.87
448 449 2.111043 CATTAGGCCCCATCGCGT 59.889 61.111 5.77 0.00 0.00 6.01
449 450 2.111043 ATTAGGCCCCATCGCGTG 59.889 61.111 5.77 3.64 0.00 5.34
450 451 2.742116 ATTAGGCCCCATCGCGTGT 61.742 57.895 5.77 0.00 0.00 4.49
451 452 2.940890 ATTAGGCCCCATCGCGTGTG 62.941 60.000 5.77 6.64 0.00 3.82
459 460 3.387091 ATCGCGTGTGGGCCAGTA 61.387 61.111 6.40 0.00 0.00 2.74
460 461 3.371097 ATCGCGTGTGGGCCAGTAG 62.371 63.158 6.40 1.36 0.00 2.57
472 473 1.990424 CCAGTAGGGGACACATGCA 59.010 57.895 0.00 0.00 0.00 3.96
511 512 2.098495 CGTGATCGACTTTAATCGCGTC 60.098 50.000 5.77 0.00 45.81 5.19
521 522 0.179148 TAATCGCGTCGTCAGCATGT 60.179 50.000 5.77 0.00 37.40 3.21
526 527 1.372872 CGTCGTCAGCATGTGTCCA 60.373 57.895 0.00 0.00 37.40 4.02
530 531 1.669115 GTCAGCATGTGTCCAGCGT 60.669 57.895 0.00 0.00 37.40 5.07
537 538 2.728846 GCATGTGTCCAGCGTAAATGTG 60.729 50.000 0.00 0.00 0.00 3.21
538 539 2.248280 TGTGTCCAGCGTAAATGTGT 57.752 45.000 0.00 0.00 0.00 3.72
539 540 2.139917 TGTGTCCAGCGTAAATGTGTC 58.860 47.619 0.00 0.00 0.00 3.67
540 541 1.463444 GTGTCCAGCGTAAATGTGTCC 59.537 52.381 0.00 0.00 0.00 4.02
541 542 0.719465 GTCCAGCGTAAATGTGTCCG 59.281 55.000 0.00 0.00 0.00 4.79
543 544 1.423845 CAGCGTAAATGTGTCCGCC 59.576 57.895 0.00 0.00 46.85 6.13
544 545 1.004320 AGCGTAAATGTGTCCGCCA 60.004 52.632 0.00 0.00 46.85 5.69
545 546 1.019278 AGCGTAAATGTGTCCGCCAG 61.019 55.000 0.00 0.00 46.85 4.85
547 548 1.800681 GTAAATGTGTCCGCCAGCC 59.199 57.895 0.00 0.00 0.00 4.85
548 549 1.377987 TAAATGTGTCCGCCAGCCC 60.378 57.895 0.00 0.00 0.00 5.19
549 550 1.847798 TAAATGTGTCCGCCAGCCCT 61.848 55.000 0.00 0.00 0.00 5.19
550 551 2.713531 AAATGTGTCCGCCAGCCCTT 62.714 55.000 0.00 0.00 0.00 3.95
551 552 3.628646 ATGTGTCCGCCAGCCCTTC 62.629 63.158 0.00 0.00 0.00 3.46
554 555 4.388499 GTCCGCCAGCCCTTCGAA 62.388 66.667 0.00 0.00 0.00 3.71
555 556 3.399181 TCCGCCAGCCCTTCGAAT 61.399 61.111 0.00 0.00 0.00 3.34
556 557 2.438434 CCGCCAGCCCTTCGAATT 60.438 61.111 0.00 0.00 0.00 2.17
557 558 1.153249 CCGCCAGCCCTTCGAATTA 60.153 57.895 0.00 0.00 0.00 1.40
558 559 0.535102 CCGCCAGCCCTTCGAATTAT 60.535 55.000 0.00 0.00 0.00 1.28
559 560 1.308998 CGCCAGCCCTTCGAATTATT 58.691 50.000 0.00 0.00 0.00 1.40
560 561 1.264288 CGCCAGCCCTTCGAATTATTC 59.736 52.381 0.00 0.00 0.00 1.75
561 562 1.609072 GCCAGCCCTTCGAATTATTCC 59.391 52.381 0.00 0.00 0.00 3.01
562 563 2.230660 CCAGCCCTTCGAATTATTCCC 58.769 52.381 0.00 0.00 0.00 3.97
563 564 2.158608 CCAGCCCTTCGAATTATTCCCT 60.159 50.000 0.00 0.00 0.00 4.20
564 565 3.142174 CAGCCCTTCGAATTATTCCCTC 58.858 50.000 0.00 0.00 0.00 4.30
565 566 3.049344 AGCCCTTCGAATTATTCCCTCT 58.951 45.455 0.00 0.00 0.00 3.69
575 576 5.420409 GAATTATTCCCTCTCGTTGTCTGT 58.580 41.667 0.00 0.00 0.00 3.41
615 616 0.522626 TTTCCATACTCGCGTCGACA 59.477 50.000 17.16 0.00 0.00 4.35
636 637 5.374071 ACAGGTCGTTGAATTTTAACCTCT 58.626 37.500 0.00 0.00 34.97 3.69
638 639 6.142817 CAGGTCGTTGAATTTTAACCTCTTG 58.857 40.000 0.00 0.00 34.97 3.02
698 706 1.277557 GCTGATCGCCATATCCCTCTT 59.722 52.381 0.00 0.00 0.00 2.85
767 775 1.825474 CTTCCTCGCCTCCTTTGTCTA 59.175 52.381 0.00 0.00 0.00 2.59
768 776 1.933021 TCCTCGCCTCCTTTGTCTAA 58.067 50.000 0.00 0.00 0.00 2.10
814 822 1.890041 CGCGACCTCGATCTCCTCT 60.890 63.158 0.00 0.00 43.02 3.69
827 835 3.393970 CCTCTGCGCCTTCCTCCA 61.394 66.667 4.18 0.00 0.00 3.86
832 840 2.347490 GCGCCTTCCTCCACTTCA 59.653 61.111 0.00 0.00 0.00 3.02
837 845 0.685097 CCTTCCTCCACTTCACCGAA 59.315 55.000 0.00 0.00 0.00 4.30
846 854 1.295423 CTTCACCGAATCCCACCGT 59.705 57.895 0.00 0.00 0.00 4.83
856 864 2.632602 ATCCCACCGTGGCACAAACA 62.633 55.000 19.09 0.00 44.16 2.83
862 870 1.723608 CCGTGGCACAAACAAGCTCA 61.724 55.000 19.09 0.00 44.16 4.26
870 878 0.517132 CAAACAAGCTCATCGACGCG 60.517 55.000 3.53 3.53 0.00 6.01
938 946 5.359009 TCACCGACGATTATACCTTTCTCTT 59.641 40.000 0.00 0.00 0.00 2.85
1062 1073 2.124983 GAGCAGCTTGGCATCCGA 60.125 61.111 0.00 0.00 35.83 4.55
1242 1259 2.802057 GCGGATAATAGTTGCGGTCTGT 60.802 50.000 0.00 0.00 0.00 3.41
1246 1263 0.035439 AATAGTTGCGGTCTGTGGGG 60.035 55.000 0.00 0.00 0.00 4.96
1290 1307 3.468770 TGTTGCCACTAACGTGTACAAT 58.531 40.909 0.00 0.00 39.55 2.71
1718 1735 1.880819 GCAAACCAGGAGTGCCCATG 61.881 60.000 7.65 0.00 37.41 3.66
1925 1942 9.950496 AGTGAATTTCAGTATTGATGACTTACT 57.050 29.630 4.90 0.00 32.27 2.24
1935 1952 7.886970 AGTATTGATGACTTACTATACCGCCTA 59.113 37.037 0.00 0.00 0.00 3.93
1944 1961 7.002879 ACTTACTATACCGCCTAAAGAGATGA 58.997 38.462 0.00 0.00 0.00 2.92
2007 2024 9.612066 ATCAAAAGGAAGATTCTTATCAGAGAC 57.388 33.333 0.00 0.00 32.95 3.36
2394 2411 8.630054 TGTTAACTGTGCTAAATCTTTGGTAT 57.370 30.769 7.22 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.199946 ACACATAATCCAATCGACCACCT 59.800 43.478 0.00 0.00 0.00 4.00
1 2 3.312421 CACACATAATCCAATCGACCACC 59.688 47.826 0.00 0.00 0.00 4.61
2 3 3.938963 ACACACATAATCCAATCGACCAC 59.061 43.478 0.00 0.00 0.00 4.16
3 4 3.938334 CACACACATAATCCAATCGACCA 59.062 43.478 0.00 0.00 0.00 4.02
4 5 4.188462 TCACACACATAATCCAATCGACC 58.812 43.478 0.00 0.00 0.00 4.79
5 6 5.991328 ATCACACACATAATCCAATCGAC 57.009 39.130 0.00 0.00 0.00 4.20
6 7 9.203421 GTAATATCACACACATAATCCAATCGA 57.797 33.333 0.00 0.00 0.00 3.59
7 8 8.987890 TGTAATATCACACACATAATCCAATCG 58.012 33.333 0.00 0.00 0.00 3.34
9 10 9.288576 CCTGTAATATCACACACATAATCCAAT 57.711 33.333 0.00 0.00 0.00 3.16
10 11 8.490311 TCCTGTAATATCACACACATAATCCAA 58.510 33.333 0.00 0.00 0.00 3.53
11 12 8.028652 TCCTGTAATATCACACACATAATCCA 57.971 34.615 0.00 0.00 0.00 3.41
12 13 8.939929 CATCCTGTAATATCACACACATAATCC 58.060 37.037 0.00 0.00 0.00 3.01
13 14 9.494271 ACATCCTGTAATATCACACACATAATC 57.506 33.333 0.00 0.00 0.00 1.75
14 15 9.276590 CACATCCTGTAATATCACACACATAAT 57.723 33.333 0.00 0.00 0.00 1.28
15 16 7.226523 GCACATCCTGTAATATCACACACATAA 59.773 37.037 0.00 0.00 0.00 1.90
16 17 6.705825 GCACATCCTGTAATATCACACACATA 59.294 38.462 0.00 0.00 0.00 2.29
17 18 5.528690 GCACATCCTGTAATATCACACACAT 59.471 40.000 0.00 0.00 0.00 3.21
18 19 4.875536 GCACATCCTGTAATATCACACACA 59.124 41.667 0.00 0.00 0.00 3.72
19 20 4.025730 CGCACATCCTGTAATATCACACAC 60.026 45.833 0.00 0.00 0.00 3.82
20 21 4.119136 CGCACATCCTGTAATATCACACA 58.881 43.478 0.00 0.00 0.00 3.72
21 22 4.368315 TCGCACATCCTGTAATATCACAC 58.632 43.478 0.00 0.00 0.00 3.82
22 23 4.664150 TCGCACATCCTGTAATATCACA 57.336 40.909 0.00 0.00 0.00 3.58
23 24 4.211374 GGTTCGCACATCCTGTAATATCAC 59.789 45.833 0.00 0.00 0.00 3.06
24 25 4.377021 GGTTCGCACATCCTGTAATATCA 58.623 43.478 0.00 0.00 0.00 2.15
25 26 3.746492 GGGTTCGCACATCCTGTAATATC 59.254 47.826 0.00 0.00 0.00 1.63
26 27 3.391296 AGGGTTCGCACATCCTGTAATAT 59.609 43.478 0.00 0.00 0.00 1.28
27 28 2.769663 AGGGTTCGCACATCCTGTAATA 59.230 45.455 0.00 0.00 0.00 0.98
28 29 1.559682 AGGGTTCGCACATCCTGTAAT 59.440 47.619 0.00 0.00 0.00 1.89
29 30 0.981183 AGGGTTCGCACATCCTGTAA 59.019 50.000 0.00 0.00 0.00 2.41
30 31 0.981183 AAGGGTTCGCACATCCTGTA 59.019 50.000 0.00 0.00 0.00 2.74
31 32 0.606401 CAAGGGTTCGCACATCCTGT 60.606 55.000 0.00 0.00 0.00 4.00
32 33 0.606401 ACAAGGGTTCGCACATCCTG 60.606 55.000 0.00 0.00 0.00 3.86
33 34 0.321653 GACAAGGGTTCGCACATCCT 60.322 55.000 0.00 0.00 0.00 3.24
34 35 1.305930 GGACAAGGGTTCGCACATCC 61.306 60.000 0.00 0.00 0.00 3.51
35 36 1.305930 GGGACAAGGGTTCGCACATC 61.306 60.000 0.00 0.00 0.00 3.06
36 37 1.303317 GGGACAAGGGTTCGCACAT 60.303 57.895 0.00 0.00 0.00 3.21
37 38 2.112297 GGGACAAGGGTTCGCACA 59.888 61.111 0.00 0.00 0.00 4.57
38 39 1.966451 CTGGGACAAGGGTTCGCAC 60.966 63.158 0.00 0.00 38.70 5.34
39 40 2.111999 CTCTGGGACAAGGGTTCGCA 62.112 60.000 0.00 0.00 38.70 5.10
40 41 1.376037 CTCTGGGACAAGGGTTCGC 60.376 63.158 0.00 0.00 38.70 4.70
41 42 1.192146 TCCTCTGGGACAAGGGTTCG 61.192 60.000 0.00 0.00 38.70 3.95
42 43 0.615850 CTCCTCTGGGACAAGGGTTC 59.384 60.000 0.00 0.00 38.70 3.62
43 44 0.842467 CCTCCTCTGGGACAAGGGTT 60.842 60.000 0.00 0.00 38.70 4.11
44 45 1.229658 CCTCCTCTGGGACAAGGGT 60.230 63.158 0.00 0.00 38.70 4.34
45 46 3.732938 CCTCCTCTGGGACAAGGG 58.267 66.667 0.00 0.00 38.70 3.95
53 54 0.549169 TAAACCACCCCCTCCTCTGG 60.549 60.000 0.00 0.00 0.00 3.86
54 55 1.596496 ATAAACCACCCCCTCCTCTG 58.404 55.000 0.00 0.00 0.00 3.35
55 56 3.745678 ATATAAACCACCCCCTCCTCT 57.254 47.619 0.00 0.00 0.00 3.69
56 57 4.759953 TCTATATAAACCACCCCCTCCTC 58.240 47.826 0.00 0.00 0.00 3.71
57 58 4.174253 ACTCTATATAAACCACCCCCTCCT 59.826 45.833 0.00 0.00 0.00 3.69
58 59 4.286291 CACTCTATATAAACCACCCCCTCC 59.714 50.000 0.00 0.00 0.00 4.30
59 60 4.262938 GCACTCTATATAAACCACCCCCTC 60.263 50.000 0.00 0.00 0.00 4.30
60 61 3.651423 GCACTCTATATAAACCACCCCCT 59.349 47.826 0.00 0.00 0.00 4.79
61 62 3.393278 TGCACTCTATATAAACCACCCCC 59.607 47.826 0.00 0.00 0.00 5.40
62 63 4.386711 GTGCACTCTATATAAACCACCCC 58.613 47.826 10.32 0.00 0.00 4.95
63 64 4.141574 TGGTGCACTCTATATAAACCACCC 60.142 45.833 17.98 0.00 40.46 4.61
64 65 5.031066 TGGTGCACTCTATATAAACCACC 57.969 43.478 17.98 0.00 41.30 4.61
65 66 5.057149 CCTGGTGCACTCTATATAAACCAC 58.943 45.833 17.98 0.00 32.94 4.16
66 67 4.966168 TCCTGGTGCACTCTATATAAACCA 59.034 41.667 17.98 0.02 35.09 3.67
67 68 5.298347 GTCCTGGTGCACTCTATATAAACC 58.702 45.833 17.98 0.00 0.00 3.27
68 69 5.298347 GGTCCTGGTGCACTCTATATAAAC 58.702 45.833 17.98 3.33 0.00 2.01
69 70 4.347000 GGGTCCTGGTGCACTCTATATAAA 59.653 45.833 17.98 0.00 0.00 1.40
70 71 3.901844 GGGTCCTGGTGCACTCTATATAA 59.098 47.826 17.98 0.00 0.00 0.98
71 72 3.507411 GGGTCCTGGTGCACTCTATATA 58.493 50.000 17.98 0.00 0.00 0.86
72 73 2.330216 GGGTCCTGGTGCACTCTATAT 58.670 52.381 17.98 0.00 0.00 0.86
73 74 1.691482 GGGGTCCTGGTGCACTCTATA 60.691 57.143 17.98 0.00 0.00 1.31
74 75 0.983378 GGGGTCCTGGTGCACTCTAT 60.983 60.000 17.98 0.00 0.00 1.98
75 76 1.612442 GGGGTCCTGGTGCACTCTA 60.612 63.158 17.98 2.80 0.00 2.43
76 77 2.930562 GGGGTCCTGGTGCACTCT 60.931 66.667 17.98 0.00 0.00 3.24
77 78 3.249189 TGGGGTCCTGGTGCACTC 61.249 66.667 17.98 7.60 0.00 3.51
78 79 3.252284 CTGGGGTCCTGGTGCACT 61.252 66.667 17.98 0.00 0.00 4.40
82 83 3.341629 ATGGCTGGGGTCCTGGTG 61.342 66.667 0.00 0.00 0.00 4.17
83 84 3.017581 GATGGCTGGGGTCCTGGT 61.018 66.667 0.00 0.00 0.00 4.00
84 85 3.813724 GGATGGCTGGGGTCCTGG 61.814 72.222 0.00 0.00 0.00 4.45
85 86 2.693864 AGGATGGCTGGGGTCCTG 60.694 66.667 0.00 0.00 40.75 3.86
86 87 2.367512 GAGGATGGCTGGGGTCCT 60.368 66.667 0.00 0.00 44.80 3.85
87 88 3.493303 GGAGGATGGCTGGGGTCC 61.493 72.222 0.00 0.00 0.00 4.46
88 89 1.649271 AATGGAGGATGGCTGGGGTC 61.649 60.000 0.00 0.00 0.00 4.46
89 90 0.328450 TAATGGAGGATGGCTGGGGT 60.328 55.000 0.00 0.00 0.00 4.95
90 91 0.111253 GTAATGGAGGATGGCTGGGG 59.889 60.000 0.00 0.00 0.00 4.96
91 92 0.846015 TGTAATGGAGGATGGCTGGG 59.154 55.000 0.00 0.00 0.00 4.45
92 93 2.511659 CATGTAATGGAGGATGGCTGG 58.488 52.381 0.00 0.00 41.79 4.85
104 105 6.687081 ACGTACATTAAACCCCATGTAATG 57.313 37.500 10.07 10.07 46.21 1.90
105 106 8.804912 TTTACGTACATTAAACCCCATGTAAT 57.195 30.769 0.00 0.00 37.57 1.89
106 107 7.882271 ACTTTACGTACATTAAACCCCATGTAA 59.118 33.333 0.00 0.00 37.57 2.41
107 108 7.393216 ACTTTACGTACATTAAACCCCATGTA 58.607 34.615 0.00 0.00 35.24 2.29
108 109 6.240145 ACTTTACGTACATTAAACCCCATGT 58.760 36.000 0.00 0.00 37.40 3.21
109 110 6.746745 ACTTTACGTACATTAAACCCCATG 57.253 37.500 0.00 0.00 0.00 3.66
110 111 7.049754 CCTACTTTACGTACATTAAACCCCAT 58.950 38.462 0.00 0.00 0.00 4.00
111 112 6.405538 CCTACTTTACGTACATTAAACCCCA 58.594 40.000 0.00 0.00 0.00 4.96
112 113 5.817296 CCCTACTTTACGTACATTAAACCCC 59.183 44.000 0.00 0.00 0.00 4.95
113 114 5.817296 CCCCTACTTTACGTACATTAAACCC 59.183 44.000 0.00 0.00 0.00 4.11
114 115 5.294306 GCCCCTACTTTACGTACATTAAACC 59.706 44.000 0.00 0.00 0.00 3.27
115 116 5.874261 TGCCCCTACTTTACGTACATTAAAC 59.126 40.000 0.00 0.00 0.00 2.01
116 117 6.047511 TGCCCCTACTTTACGTACATTAAA 57.952 37.500 0.00 0.00 0.00 1.52
117 118 5.674052 TGCCCCTACTTTACGTACATTAA 57.326 39.130 0.00 0.00 0.00 1.40
118 119 5.874897 ATGCCCCTACTTTACGTACATTA 57.125 39.130 0.00 0.00 0.00 1.90
119 120 4.765813 ATGCCCCTACTTTACGTACATT 57.234 40.909 0.00 0.00 0.00 2.71
120 121 4.765813 AATGCCCCTACTTTACGTACAT 57.234 40.909 0.00 0.00 0.00 2.29
121 122 4.465660 TGTAATGCCCCTACTTTACGTACA 59.534 41.667 0.00 0.00 34.54 2.90
122 123 5.009854 TGTAATGCCCCTACTTTACGTAC 57.990 43.478 0.00 0.00 34.54 3.67
123 124 4.099881 CCTGTAATGCCCCTACTTTACGTA 59.900 45.833 0.00 0.00 34.54 3.57
124 125 3.118519 CCTGTAATGCCCCTACTTTACGT 60.119 47.826 0.00 0.00 34.54 3.57
125 126 3.118519 ACCTGTAATGCCCCTACTTTACG 60.119 47.826 0.00 0.00 34.54 3.18
126 127 4.498894 ACCTGTAATGCCCCTACTTTAC 57.501 45.455 0.00 0.00 33.19 2.01
127 128 5.395546 CGTTACCTGTAATGCCCCTACTTTA 60.396 44.000 0.00 0.00 0.00 1.85
128 129 4.624604 CGTTACCTGTAATGCCCCTACTTT 60.625 45.833 0.00 0.00 0.00 2.66
129 130 3.118519 CGTTACCTGTAATGCCCCTACTT 60.119 47.826 0.00 0.00 0.00 2.24
130 131 2.433239 CGTTACCTGTAATGCCCCTACT 59.567 50.000 0.00 0.00 0.00 2.57
131 132 2.830104 CGTTACCTGTAATGCCCCTAC 58.170 52.381 0.00 0.00 0.00 3.18
132 133 1.139455 GCGTTACCTGTAATGCCCCTA 59.861 52.381 18.99 0.00 46.77 3.53
133 134 0.107361 GCGTTACCTGTAATGCCCCT 60.107 55.000 18.99 0.00 46.77 4.79
134 135 2.400911 GCGTTACCTGTAATGCCCC 58.599 57.895 18.99 0.00 46.77 5.80
138 139 3.194005 AGGATGGCGTTACCTGTAATG 57.806 47.619 5.14 5.14 40.22 1.90
139 140 3.926058 AAGGATGGCGTTACCTGTAAT 57.074 42.857 0.00 0.00 40.22 1.89
140 141 4.822685 TTAAGGATGGCGTTACCTGTAA 57.177 40.909 0.00 0.00 40.22 2.41
141 142 4.699637 CATTAAGGATGGCGTTACCTGTA 58.300 43.478 0.00 0.00 40.22 2.74
142 143 3.541632 CATTAAGGATGGCGTTACCTGT 58.458 45.455 0.00 0.00 40.22 4.00
143 144 2.290641 GCATTAAGGATGGCGTTACCTG 59.709 50.000 0.00 0.00 40.22 4.00
144 145 2.172717 AGCATTAAGGATGGCGTTACCT 59.827 45.455 0.00 0.00 40.22 3.08
145 146 2.572290 AGCATTAAGGATGGCGTTACC 58.428 47.619 0.00 0.00 36.21 2.85
146 147 5.468746 TCAATAGCATTAAGGATGGCGTTAC 59.531 40.000 0.00 0.00 36.21 2.50
147 148 5.616270 TCAATAGCATTAAGGATGGCGTTA 58.384 37.500 0.00 0.00 36.21 3.18
148 149 4.460263 TCAATAGCATTAAGGATGGCGTT 58.540 39.130 0.00 0.00 36.21 4.84
149 150 4.085357 TCAATAGCATTAAGGATGGCGT 57.915 40.909 0.00 0.00 36.21 5.68
150 151 4.696877 TCATCAATAGCATTAAGGATGGCG 59.303 41.667 0.00 0.00 36.21 5.69
151 152 5.105997 GGTCATCAATAGCATTAAGGATGGC 60.106 44.000 0.00 0.00 36.82 4.40
152 153 6.243900 AGGTCATCAATAGCATTAAGGATGG 58.756 40.000 0.00 0.00 36.21 3.51
153 154 7.756395 AAGGTCATCAATAGCATTAAGGATG 57.244 36.000 0.00 0.00 38.85 3.51
154 155 9.866655 TTTAAGGTCATCAATAGCATTAAGGAT 57.133 29.630 0.00 0.00 0.00 3.24
155 156 9.342308 CTTTAAGGTCATCAATAGCATTAAGGA 57.658 33.333 0.00 0.00 0.00 3.36
156 157 9.342308 TCTTTAAGGTCATCAATAGCATTAAGG 57.658 33.333 0.00 0.00 0.00 2.69
158 159 9.905713 AGTCTTTAAGGTCATCAATAGCATTAA 57.094 29.630 0.00 0.00 0.00 1.40
161 162 9.499479 CATAGTCTTTAAGGTCATCAATAGCAT 57.501 33.333 0.00 0.00 0.00 3.79
162 163 7.933577 CCATAGTCTTTAAGGTCATCAATAGCA 59.066 37.037 0.00 0.00 0.00 3.49
163 164 8.150945 TCCATAGTCTTTAAGGTCATCAATAGC 58.849 37.037 0.00 0.00 0.00 2.97
164 165 9.703892 CTCCATAGTCTTTAAGGTCATCAATAG 57.296 37.037 0.00 0.00 0.00 1.73
165 166 8.651389 CCTCCATAGTCTTTAAGGTCATCAATA 58.349 37.037 0.00 0.00 0.00 1.90
166 167 7.348274 TCCTCCATAGTCTTTAAGGTCATCAAT 59.652 37.037 0.00 0.00 0.00 2.57
167 168 6.672218 TCCTCCATAGTCTTTAAGGTCATCAA 59.328 38.462 0.00 0.00 0.00 2.57
168 169 6.202331 TCCTCCATAGTCTTTAAGGTCATCA 58.798 40.000 0.00 0.00 0.00 3.07
169 170 6.732896 TCCTCCATAGTCTTTAAGGTCATC 57.267 41.667 0.00 0.00 0.00 2.92
170 171 6.407074 CGTTCCTCCATAGTCTTTAAGGTCAT 60.407 42.308 0.00 0.00 0.00 3.06
171 172 5.105473 CGTTCCTCCATAGTCTTTAAGGTCA 60.105 44.000 0.00 0.00 0.00 4.02
172 173 5.349809 CGTTCCTCCATAGTCTTTAAGGTC 58.650 45.833 0.00 0.00 0.00 3.85
173 174 4.382793 GCGTTCCTCCATAGTCTTTAAGGT 60.383 45.833 0.00 0.00 0.00 3.50
174 175 4.120589 GCGTTCCTCCATAGTCTTTAAGG 58.879 47.826 0.00 0.00 0.00 2.69
175 176 5.012328 AGCGTTCCTCCATAGTCTTTAAG 57.988 43.478 0.00 0.00 0.00 1.85
176 177 5.175859 CAAGCGTTCCTCCATAGTCTTTAA 58.824 41.667 0.00 0.00 0.00 1.52
177 178 4.755411 CAAGCGTTCCTCCATAGTCTTTA 58.245 43.478 0.00 0.00 0.00 1.85
178 179 3.600388 CAAGCGTTCCTCCATAGTCTTT 58.400 45.455 0.00 0.00 0.00 2.52
179 180 2.678190 GCAAGCGTTCCTCCATAGTCTT 60.678 50.000 0.00 0.00 0.00 3.01
180 181 1.134670 GCAAGCGTTCCTCCATAGTCT 60.135 52.381 0.00 0.00 0.00 3.24
181 182 1.291132 GCAAGCGTTCCTCCATAGTC 58.709 55.000 0.00 0.00 0.00 2.59
182 183 0.107654 GGCAAGCGTTCCTCCATAGT 60.108 55.000 0.00 0.00 0.00 2.12
183 184 0.815615 GGGCAAGCGTTCCTCCATAG 60.816 60.000 0.00 0.00 0.00 2.23
184 185 1.223487 GGGCAAGCGTTCCTCCATA 59.777 57.895 0.00 0.00 0.00 2.74
185 186 2.044946 GGGCAAGCGTTCCTCCAT 60.045 61.111 0.00 0.00 0.00 3.41
186 187 2.424842 AATGGGCAAGCGTTCCTCCA 62.425 55.000 0.00 0.00 0.00 3.86
187 188 0.393808 TAATGGGCAAGCGTTCCTCC 60.394 55.000 0.00 0.00 0.00 4.30
188 189 0.733150 GTAATGGGCAAGCGTTCCTC 59.267 55.000 0.00 0.00 0.00 3.71
189 190 0.037590 TGTAATGGGCAAGCGTTCCT 59.962 50.000 0.00 0.00 0.00 3.36
190 191 0.885196 TTGTAATGGGCAAGCGTTCC 59.115 50.000 0.00 0.00 0.00 3.62
191 192 2.094752 ACATTGTAATGGGCAAGCGTTC 60.095 45.455 9.22 0.00 40.70 3.95
192 193 1.892474 ACATTGTAATGGGCAAGCGTT 59.108 42.857 9.22 0.00 40.70 4.84
193 194 1.544724 ACATTGTAATGGGCAAGCGT 58.455 45.000 9.22 0.00 40.70 5.07
194 195 2.094803 TCAACATTGTAATGGGCAAGCG 60.095 45.455 9.22 0.00 40.70 4.68
195 196 3.056607 ACTCAACATTGTAATGGGCAAGC 60.057 43.478 9.22 0.00 40.70 4.01
196 197 4.218200 TCACTCAACATTGTAATGGGCAAG 59.782 41.667 9.22 4.08 40.70 4.01
197 198 4.022416 GTCACTCAACATTGTAATGGGCAA 60.022 41.667 9.22 0.00 40.70 4.52
198 199 3.505680 GTCACTCAACATTGTAATGGGCA 59.494 43.478 9.22 0.00 40.70 5.36
199 200 3.758554 AGTCACTCAACATTGTAATGGGC 59.241 43.478 9.22 0.00 40.70 5.36
200 201 5.122869 CAGAGTCACTCAACATTGTAATGGG 59.877 44.000 7.77 1.80 35.40 4.00
201 202 5.122869 CCAGAGTCACTCAACATTGTAATGG 59.877 44.000 7.77 0.00 35.40 3.16
202 203 5.122869 CCCAGAGTCACTCAACATTGTAATG 59.877 44.000 7.77 3.17 36.36 1.90
203 204 5.221925 ACCCAGAGTCACTCAACATTGTAAT 60.222 40.000 7.77 0.00 32.06 1.89
204 205 4.102524 ACCCAGAGTCACTCAACATTGTAA 59.897 41.667 7.77 0.00 32.06 2.41
205 206 3.646162 ACCCAGAGTCACTCAACATTGTA 59.354 43.478 7.77 0.00 32.06 2.41
206 207 2.439507 ACCCAGAGTCACTCAACATTGT 59.560 45.455 7.77 0.00 32.06 2.71
207 208 3.070018 GACCCAGAGTCACTCAACATTG 58.930 50.000 7.77 0.00 45.55 2.82
208 209 3.409026 GACCCAGAGTCACTCAACATT 57.591 47.619 7.77 0.00 45.55 2.71
218 219 1.797025 CAAACCGAAGACCCAGAGTC 58.203 55.000 0.00 0.00 46.71 3.36
219 220 0.250338 GCAAACCGAAGACCCAGAGT 60.250 55.000 0.00 0.00 0.00 3.24
220 221 0.955919 GGCAAACCGAAGACCCAGAG 60.956 60.000 0.00 0.00 0.00 3.35
221 222 1.072505 GGCAAACCGAAGACCCAGA 59.927 57.895 0.00 0.00 0.00 3.86
222 223 3.668386 GGCAAACCGAAGACCCAG 58.332 61.111 0.00 0.00 0.00 4.45
232 233 1.029681 AAGGAAACACTCGGCAAACC 58.970 50.000 0.00 0.00 0.00 3.27
233 234 1.269051 CCAAGGAAACACTCGGCAAAC 60.269 52.381 0.00 0.00 0.00 2.93
234 235 1.028905 CCAAGGAAACACTCGGCAAA 58.971 50.000 0.00 0.00 0.00 3.68
235 236 0.821711 CCCAAGGAAACACTCGGCAA 60.822 55.000 0.00 0.00 0.00 4.52
236 237 1.228124 CCCAAGGAAACACTCGGCA 60.228 57.895 0.00 0.00 0.00 5.69
237 238 1.228154 ACCCAAGGAAACACTCGGC 60.228 57.895 0.00 0.00 0.00 5.54
238 239 0.889186 CCACCCAAGGAAACACTCGG 60.889 60.000 0.00 0.00 0.00 4.63
239 240 0.179029 ACCACCCAAGGAAACACTCG 60.179 55.000 0.00 0.00 0.00 4.18
240 241 1.605753 GACCACCCAAGGAAACACTC 58.394 55.000 0.00 0.00 0.00 3.51
241 242 0.179029 CGACCACCCAAGGAAACACT 60.179 55.000 0.00 0.00 0.00 3.55
242 243 0.179040 TCGACCACCCAAGGAAACAC 60.179 55.000 0.00 0.00 0.00 3.32
243 244 0.107831 CTCGACCACCCAAGGAAACA 59.892 55.000 0.00 0.00 0.00 2.83
244 245 0.108019 ACTCGACCACCCAAGGAAAC 59.892 55.000 0.00 0.00 0.00 2.78
245 246 0.107831 CACTCGACCACCCAAGGAAA 59.892 55.000 0.00 0.00 0.00 3.13
246 247 0.761323 TCACTCGACCACCCAAGGAA 60.761 55.000 0.00 0.00 0.00 3.36
247 248 1.152419 TCACTCGACCACCCAAGGA 60.152 57.895 0.00 0.00 0.00 3.36
248 249 1.004918 GTCACTCGACCACCCAAGG 60.005 63.158 0.00 0.00 36.02 3.61
249 250 0.105964 TTGTCACTCGACCACCCAAG 59.894 55.000 0.00 0.00 41.85 3.61
250 251 0.762418 ATTGTCACTCGACCACCCAA 59.238 50.000 0.00 0.00 41.85 4.12
251 252 1.548719 CTATTGTCACTCGACCACCCA 59.451 52.381 0.00 0.00 41.85 4.51
252 253 1.134788 CCTATTGTCACTCGACCACCC 60.135 57.143 0.00 0.00 41.85 4.61
253 254 1.549170 ACCTATTGTCACTCGACCACC 59.451 52.381 0.00 0.00 41.85 4.61
254 255 3.181489 CCTACCTATTGTCACTCGACCAC 60.181 52.174 0.00 0.00 41.85 4.16
255 256 3.021695 CCTACCTATTGTCACTCGACCA 58.978 50.000 0.00 0.00 41.85 4.02
256 257 3.285484 TCCTACCTATTGTCACTCGACC 58.715 50.000 0.00 0.00 41.85 4.79
257 258 3.315749 CCTCCTACCTATTGTCACTCGAC 59.684 52.174 0.00 0.00 42.93 4.20
258 259 3.201487 TCCTCCTACCTATTGTCACTCGA 59.799 47.826 0.00 0.00 0.00 4.04
259 260 3.315749 GTCCTCCTACCTATTGTCACTCG 59.684 52.174 0.00 0.00 0.00 4.18
260 261 4.538738 AGTCCTCCTACCTATTGTCACTC 58.461 47.826 0.00 0.00 0.00 3.51
261 262 4.538738 GAGTCCTCCTACCTATTGTCACT 58.461 47.826 0.00 0.00 0.00 3.41
262 263 3.637694 GGAGTCCTCCTACCTATTGTCAC 59.362 52.174 0.41 0.00 46.16 3.67
263 264 3.912248 GGAGTCCTCCTACCTATTGTCA 58.088 50.000 0.41 0.00 46.16 3.58
276 277 0.457851 CATGTCACTCGGGAGTCCTC 59.542 60.000 9.58 0.00 40.20 3.71
277 278 0.039764 TCATGTCACTCGGGAGTCCT 59.960 55.000 9.58 0.00 40.20 3.85
278 279 1.115467 ATCATGTCACTCGGGAGTCC 58.885 55.000 0.00 0.00 40.20 3.85
279 280 2.093973 ACAATCATGTCACTCGGGAGTC 60.094 50.000 0.00 0.00 33.12 3.36
280 281 1.902508 ACAATCATGTCACTCGGGAGT 59.097 47.619 0.00 0.00 33.41 3.85
281 282 2.680312 ACAATCATGTCACTCGGGAG 57.320 50.000 0.00 0.00 33.41 4.30
290 291 5.446473 GTGAATTCCACTCGACAATCATGTC 60.446 44.000 2.27 0.00 45.41 3.06
291 292 4.393062 GTGAATTCCACTCGACAATCATGT 59.607 41.667 2.27 0.00 41.74 3.21
292 293 4.901814 GTGAATTCCACTCGACAATCATG 58.098 43.478 2.27 0.00 42.44 3.07
304 305 4.690748 TCAAAGATGTCGAGTGAATTCCAC 59.309 41.667 2.27 1.64 46.03 4.02
305 306 4.690748 GTCAAAGATGTCGAGTGAATTCCA 59.309 41.667 2.27 0.00 0.00 3.53
306 307 4.932200 AGTCAAAGATGTCGAGTGAATTCC 59.068 41.667 2.27 0.00 0.00 3.01
307 308 5.163913 CCAGTCAAAGATGTCGAGTGAATTC 60.164 44.000 0.00 0.00 32.85 2.17
308 309 4.692625 CCAGTCAAAGATGTCGAGTGAATT 59.307 41.667 0.00 0.00 32.85 2.17
309 310 4.248859 CCAGTCAAAGATGTCGAGTGAAT 58.751 43.478 0.00 0.00 32.85 2.57
310 311 3.554960 CCCAGTCAAAGATGTCGAGTGAA 60.555 47.826 0.00 0.00 32.85 3.18
311 312 2.029020 CCCAGTCAAAGATGTCGAGTGA 60.029 50.000 0.00 0.00 32.85 3.41
312 313 2.341257 CCCAGTCAAAGATGTCGAGTG 58.659 52.381 0.00 0.00 0.00 3.51
313 314 1.276421 CCCCAGTCAAAGATGTCGAGT 59.724 52.381 0.00 0.00 0.00 4.18
314 315 1.406069 CCCCCAGTCAAAGATGTCGAG 60.406 57.143 0.00 0.00 0.00 4.04
315 316 0.613260 CCCCCAGTCAAAGATGTCGA 59.387 55.000 0.00 0.00 0.00 4.20
316 317 0.324943 ACCCCCAGTCAAAGATGTCG 59.675 55.000 0.00 0.00 0.00 4.35
317 318 2.115343 GACCCCCAGTCAAAGATGTC 57.885 55.000 0.00 0.00 45.55 3.06
326 327 1.004918 CAACACGAGACCCCCAGTC 60.005 63.158 0.00 0.00 46.71 3.51
327 328 1.755393 GACAACACGAGACCCCCAGT 61.755 60.000 0.00 0.00 0.00 4.00
328 329 1.004918 GACAACACGAGACCCCCAG 60.005 63.158 0.00 0.00 0.00 4.45
329 330 1.458777 AGACAACACGAGACCCCCA 60.459 57.895 0.00 0.00 0.00 4.96
330 331 1.186267 AGAGACAACACGAGACCCCC 61.186 60.000 0.00 0.00 0.00 5.40
331 332 0.680061 AAGAGACAACACGAGACCCC 59.320 55.000 0.00 0.00 0.00 4.95
332 333 1.340248 TCAAGAGACAACACGAGACCC 59.660 52.381 0.00 0.00 0.00 4.46
333 334 2.795175 TCAAGAGACAACACGAGACC 57.205 50.000 0.00 0.00 0.00 3.85
334 335 3.707793 AGTTCAAGAGACAACACGAGAC 58.292 45.455 0.00 0.00 0.00 3.36
335 336 4.098044 AGAAGTTCAAGAGACAACACGAGA 59.902 41.667 5.50 0.00 0.00 4.04
336 337 4.363999 AGAAGTTCAAGAGACAACACGAG 58.636 43.478 5.50 0.00 0.00 4.18
337 338 4.386867 AGAAGTTCAAGAGACAACACGA 57.613 40.909 5.50 0.00 0.00 4.35
338 339 6.128795 GGATAAGAAGTTCAAGAGACAACACG 60.129 42.308 5.50 0.00 0.00 4.49
339 340 6.931840 AGGATAAGAAGTTCAAGAGACAACAC 59.068 38.462 5.50 0.00 0.00 3.32
340 341 7.015682 AGAGGATAAGAAGTTCAAGAGACAACA 59.984 37.037 5.50 0.00 0.00 3.33
341 342 7.382898 AGAGGATAAGAAGTTCAAGAGACAAC 58.617 38.462 5.50 0.00 0.00 3.32
342 343 7.546250 AGAGGATAAGAAGTTCAAGAGACAA 57.454 36.000 5.50 0.00 0.00 3.18
343 344 7.340743 CCTAGAGGATAAGAAGTTCAAGAGACA 59.659 40.741 5.50 0.00 37.39 3.41
344 345 7.201875 CCCTAGAGGATAAGAAGTTCAAGAGAC 60.202 44.444 5.50 0.00 38.24 3.36
345 346 6.836527 CCCTAGAGGATAAGAAGTTCAAGAGA 59.163 42.308 5.50 0.00 38.24 3.10
346 347 6.609616 ACCCTAGAGGATAAGAAGTTCAAGAG 59.390 42.308 5.50 0.00 39.89 2.85
347 348 6.503944 ACCCTAGAGGATAAGAAGTTCAAGA 58.496 40.000 5.50 0.00 39.89 3.02
348 349 6.800072 ACCCTAGAGGATAAGAAGTTCAAG 57.200 41.667 5.50 0.00 39.89 3.02
349 350 6.839657 CCTACCCTAGAGGATAAGAAGTTCAA 59.160 42.308 5.50 0.00 39.89 2.69
350 351 6.374588 CCTACCCTAGAGGATAAGAAGTTCA 58.625 44.000 5.50 0.00 39.89 3.18
351 352 5.776208 CCCTACCCTAGAGGATAAGAAGTTC 59.224 48.000 0.00 0.00 39.89 3.01
352 353 5.439059 TCCCTACCCTAGAGGATAAGAAGTT 59.561 44.000 0.00 0.00 39.89 2.66
353 354 4.989545 TCCCTACCCTAGAGGATAAGAAGT 59.010 45.833 0.00 0.00 39.89 3.01
354 355 5.326900 GTCCCTACCCTAGAGGATAAGAAG 58.673 50.000 0.00 0.00 39.89 2.85
355 356 4.107636 GGTCCCTACCCTAGAGGATAAGAA 59.892 50.000 0.00 0.00 40.21 2.52
356 357 3.661654 GGTCCCTACCCTAGAGGATAAGA 59.338 52.174 0.00 0.00 40.21 2.10
357 358 4.050315 GGTCCCTACCCTAGAGGATAAG 57.950 54.545 0.00 0.00 40.21 1.73
369 370 0.340908 TCCTACCCAAGGTCCCTACC 59.659 60.000 0.00 0.00 46.62 3.18
370 371 1.493861 GTCCTACCCAAGGTCCCTAC 58.506 60.000 0.00 0.00 46.62 3.18
371 372 0.032813 CGTCCTACCCAAGGTCCCTA 60.033 60.000 0.00 0.00 46.62 3.53
372 373 1.305887 CGTCCTACCCAAGGTCCCT 60.306 63.158 0.00 0.00 46.62 4.20
373 374 0.324645 TACGTCCTACCCAAGGTCCC 60.325 60.000 0.00 0.00 46.62 4.46
374 375 1.785647 ATACGTCCTACCCAAGGTCC 58.214 55.000 0.00 0.00 46.62 4.46
375 376 3.305881 GCATATACGTCCTACCCAAGGTC 60.306 52.174 0.00 0.00 46.62 3.85
376 377 2.631545 GCATATACGTCCTACCCAAGGT 59.368 50.000 0.00 0.00 46.62 3.50
378 379 2.631062 TGGCATATACGTCCTACCCAAG 59.369 50.000 0.00 0.00 0.00 3.61
379 380 2.631062 CTGGCATATACGTCCTACCCAA 59.369 50.000 0.00 0.00 0.00 4.12
380 381 2.244695 CTGGCATATACGTCCTACCCA 58.755 52.381 0.00 0.00 0.00 4.51
381 382 1.549170 CCTGGCATATACGTCCTACCC 59.451 57.143 0.00 0.00 0.00 3.69
382 383 1.067071 GCCTGGCATATACGTCCTACC 60.067 57.143 15.17 0.00 0.00 3.18
383 384 1.067071 GGCCTGGCATATACGTCCTAC 60.067 57.143 22.05 0.00 0.00 3.18
384 385 1.203137 AGGCCTGGCATATACGTCCTA 60.203 52.381 22.05 0.00 0.00 2.94
385 386 0.471971 AGGCCTGGCATATACGTCCT 60.472 55.000 22.05 1.43 0.00 3.85
386 387 1.263356 TAGGCCTGGCATATACGTCC 58.737 55.000 22.05 0.00 0.00 4.79
387 388 2.496070 TCATAGGCCTGGCATATACGTC 59.504 50.000 23.79 2.36 33.13 4.34
388 389 2.233922 GTCATAGGCCTGGCATATACGT 59.766 50.000 23.79 1.83 33.13 3.57
389 390 2.418746 GGTCATAGGCCTGGCATATACG 60.419 54.545 23.79 13.76 33.13 3.06
390 391 2.092914 GGGTCATAGGCCTGGCATATAC 60.093 54.545 23.79 19.75 33.13 1.47
391 392 2.196595 GGGTCATAGGCCTGGCATATA 58.803 52.381 23.79 12.08 33.13 0.86
392 393 0.995024 GGGTCATAGGCCTGGCATAT 59.005 55.000 19.37 19.37 35.89 1.78
393 394 0.104462 AGGGTCATAGGCCTGGCATA 60.104 55.000 22.05 19.07 0.00 3.14
394 395 0.104462 TAGGGTCATAGGCCTGGCAT 60.104 55.000 22.05 17.16 0.00 4.40
395 396 1.054406 GTAGGGTCATAGGCCTGGCA 61.054 60.000 22.05 0.00 0.00 4.92
396 397 1.755384 GTAGGGTCATAGGCCTGGC 59.245 63.158 17.99 11.05 0.00 4.85
397 398 1.128188 GGGTAGGGTCATAGGCCTGG 61.128 65.000 17.99 7.85 0.00 4.45
398 399 1.128188 GGGGTAGGGTCATAGGCCTG 61.128 65.000 17.99 0.00 0.00 4.85
399 400 1.239235 GGGGTAGGGTCATAGGCCT 59.761 63.158 11.78 11.78 0.00 5.19
400 401 0.696485 TTGGGGTAGGGTCATAGGCC 60.696 60.000 0.00 0.00 0.00 5.19
401 402 1.218844 TTTGGGGTAGGGTCATAGGC 58.781 55.000 0.00 0.00 0.00 3.93
402 403 4.601857 ACATATTTGGGGTAGGGTCATAGG 59.398 45.833 0.00 0.00 0.00 2.57
403 404 5.843019 ACATATTTGGGGTAGGGTCATAG 57.157 43.478 0.00 0.00 0.00 2.23
404 405 6.445786 GGATACATATTTGGGGTAGGGTCATA 59.554 42.308 0.00 0.00 0.00 2.15
405 406 5.253096 GGATACATATTTGGGGTAGGGTCAT 59.747 44.000 0.00 0.00 0.00 3.06
406 407 4.600111 GGATACATATTTGGGGTAGGGTCA 59.400 45.833 0.00 0.00 0.00 4.02
407 408 4.850386 AGGATACATATTTGGGGTAGGGTC 59.150 45.833 0.00 0.00 41.41 4.46
408 409 4.850386 GAGGATACATATTTGGGGTAGGGT 59.150 45.833 0.00 0.00 41.41 4.34
409 410 4.849810 TGAGGATACATATTTGGGGTAGGG 59.150 45.833 0.00 0.00 41.41 3.53
410 411 6.642733 ATGAGGATACATATTTGGGGTAGG 57.357 41.667 0.00 0.00 41.41 3.18
428 429 1.302832 GCGATGGGGCCTAATGAGG 60.303 63.158 0.84 0.00 46.93 3.86
429 430 1.669115 CGCGATGGGGCCTAATGAG 60.669 63.158 0.00 0.00 0.00 2.90
430 431 2.425592 CGCGATGGGGCCTAATGA 59.574 61.111 0.00 0.00 0.00 2.57
431 432 2.111043 ACGCGATGGGGCCTAATG 59.889 61.111 15.93 0.00 0.00 1.90
432 433 2.111043 CACGCGATGGGGCCTAAT 59.889 61.111 15.93 0.00 0.00 1.73
433 434 3.395702 ACACGCGATGGGGCCTAA 61.396 61.111 15.93 0.00 0.00 2.69
434 435 4.155733 CACACGCGATGGGGCCTA 62.156 66.667 15.93 0.00 0.00 3.93
441 442 3.657448 TACTGGCCCACACGCGATG 62.657 63.158 15.93 10.97 0.00 3.84
442 443 3.371097 CTACTGGCCCACACGCGAT 62.371 63.158 15.93 0.00 0.00 4.58
443 444 4.063967 CTACTGGCCCACACGCGA 62.064 66.667 15.93 0.00 0.00 5.87
445 446 4.778143 CCCTACTGGCCCACACGC 62.778 72.222 0.00 0.00 0.00 5.34
446 447 4.096003 CCCCTACTGGCCCACACG 62.096 72.222 0.00 0.00 0.00 4.49
447 448 2.609610 TCCCCTACTGGCCCACAC 60.610 66.667 0.00 0.00 0.00 3.82
448 449 2.609610 GTCCCCTACTGGCCCACA 60.610 66.667 0.00 0.00 0.00 4.17
449 450 2.609610 TGTCCCCTACTGGCCCAC 60.610 66.667 0.00 0.00 0.00 4.61
450 451 2.609610 GTGTCCCCTACTGGCCCA 60.610 66.667 0.00 0.00 0.00 5.36
451 452 2.001269 ATGTGTCCCCTACTGGCCC 61.001 63.158 0.00 0.00 0.00 5.80
452 453 1.224592 CATGTGTCCCCTACTGGCC 59.775 63.158 0.00 0.00 0.00 5.36
453 454 1.452108 GCATGTGTCCCCTACTGGC 60.452 63.158 0.00 0.00 0.00 4.85
454 455 0.107508 CTGCATGTGTCCCCTACTGG 60.108 60.000 0.00 0.00 0.00 4.00
455 456 0.745845 GCTGCATGTGTCCCCTACTG 60.746 60.000 0.00 0.00 0.00 2.74
456 457 1.200760 TGCTGCATGTGTCCCCTACT 61.201 55.000 0.00 0.00 0.00 2.57
457 458 0.745845 CTGCTGCATGTGTCCCCTAC 60.746 60.000 1.31 0.00 0.00 3.18
458 459 1.603842 CTGCTGCATGTGTCCCCTA 59.396 57.895 1.31 0.00 0.00 3.53
459 460 2.353958 CTGCTGCATGTGTCCCCT 59.646 61.111 1.31 0.00 0.00 4.79
460 461 3.446570 GCTGCTGCATGTGTCCCC 61.447 66.667 11.11 0.00 39.41 4.81
461 462 3.446570 GGCTGCTGCATGTGTCCC 61.447 66.667 17.89 0.00 41.91 4.46
472 473 4.827087 CGTCCATGCGAGGCTGCT 62.827 66.667 0.00 0.00 35.36 4.24
511 512 2.733671 CGCTGGACACATGCTGACG 61.734 63.158 0.00 0.00 0.00 4.35
521 522 1.803334 GGACACATTTACGCTGGACA 58.197 50.000 0.00 0.00 0.00 4.02
530 531 1.377987 GGGCTGGCGGACACATTTA 60.378 57.895 0.00 0.00 0.00 1.40
537 538 3.682292 ATTCGAAGGGCTGGCGGAC 62.682 63.158 3.35 0.00 0.00 4.79
538 539 1.618876 TAATTCGAAGGGCTGGCGGA 61.619 55.000 3.35 0.00 0.00 5.54
539 540 0.535102 ATAATTCGAAGGGCTGGCGG 60.535 55.000 3.35 0.00 0.00 6.13
540 541 1.264288 GAATAATTCGAAGGGCTGGCG 59.736 52.381 3.35 0.00 0.00 5.69
541 542 1.609072 GGAATAATTCGAAGGGCTGGC 59.391 52.381 3.35 0.00 0.00 4.85
543 544 3.142174 GAGGGAATAATTCGAAGGGCTG 58.858 50.000 3.35 0.00 0.00 4.85
544 545 3.049344 AGAGGGAATAATTCGAAGGGCT 58.951 45.455 3.35 0.00 0.00 5.19
545 546 3.403968 GAGAGGGAATAATTCGAAGGGC 58.596 50.000 3.35 0.00 0.00 5.19
547 548 4.323553 ACGAGAGGGAATAATTCGAAGG 57.676 45.455 3.35 0.00 35.42 3.46
548 549 5.109903 ACAACGAGAGGGAATAATTCGAAG 58.890 41.667 3.35 0.00 35.42 3.79
549 550 5.080969 ACAACGAGAGGGAATAATTCGAA 57.919 39.130 0.00 0.00 35.42 3.71
550 551 4.401519 AGACAACGAGAGGGAATAATTCGA 59.598 41.667 0.00 0.00 35.42 3.71
551 552 4.504461 CAGACAACGAGAGGGAATAATTCG 59.496 45.833 0.00 0.00 37.31 3.34
552 553 5.292101 CACAGACAACGAGAGGGAATAATTC 59.708 44.000 0.00 0.00 0.00 2.17
553 554 5.178797 CACAGACAACGAGAGGGAATAATT 58.821 41.667 0.00 0.00 0.00 1.40
554 555 4.759782 CACAGACAACGAGAGGGAATAAT 58.240 43.478 0.00 0.00 0.00 1.28
555 556 3.616560 GCACAGACAACGAGAGGGAATAA 60.617 47.826 0.00 0.00 0.00 1.40
556 557 2.094182 GCACAGACAACGAGAGGGAATA 60.094 50.000 0.00 0.00 0.00 1.75
557 558 1.338200 GCACAGACAACGAGAGGGAAT 60.338 52.381 0.00 0.00 0.00 3.01
558 559 0.033504 GCACAGACAACGAGAGGGAA 59.966 55.000 0.00 0.00 0.00 3.97
559 560 0.827925 AGCACAGACAACGAGAGGGA 60.828 55.000 0.00 0.00 0.00 4.20
560 561 0.389166 GAGCACAGACAACGAGAGGG 60.389 60.000 0.00 0.00 0.00 4.30
561 562 0.730834 CGAGCACAGACAACGAGAGG 60.731 60.000 0.00 0.00 0.00 3.69
562 563 0.730834 CCGAGCACAGACAACGAGAG 60.731 60.000 0.00 0.00 0.00 3.20
563 564 1.285950 CCGAGCACAGACAACGAGA 59.714 57.895 0.00 0.00 0.00 4.04
564 565 1.734477 CCCGAGCACAGACAACGAG 60.734 63.158 0.00 0.00 0.00 4.18
565 566 2.197605 TCCCGAGCACAGACAACGA 61.198 57.895 0.00 0.00 0.00 3.85
615 616 5.826208 ACAAGAGGTTAAAATTCAACGACCT 59.174 36.000 0.00 0.00 40.04 3.85
629 630 4.157289 GGTGATACGACTCACAAGAGGTTA 59.843 45.833 18.81 0.00 45.95 2.85
636 637 3.693807 AGTAGGGTGATACGACTCACAA 58.306 45.455 18.81 5.99 45.95 3.33
638 639 5.061853 TCATAGTAGGGTGATACGACTCAC 58.938 45.833 11.88 11.88 43.90 3.51
814 822 2.347490 GAAGTGGAGGAAGGCGCA 59.653 61.111 10.83 0.00 0.00 6.09
827 835 1.295423 CGGTGGGATTCGGTGAAGT 59.705 57.895 0.00 0.00 0.00 3.01
832 840 4.404098 GCCACGGTGGGATTCGGT 62.404 66.667 27.41 0.00 38.19 4.69
837 845 1.901464 GTTTGTGCCACGGTGGGAT 60.901 57.895 27.41 0.00 40.94 3.85
846 854 0.592637 CGATGAGCTTGTTTGTGCCA 59.407 50.000 0.00 0.00 0.00 4.92
856 864 2.507102 CCACGCGTCGATGAGCTT 60.507 61.111 9.86 0.00 0.00 3.74
862 870 2.431942 GTTGACCCACGCGTCGAT 60.432 61.111 9.86 0.00 35.40 3.59
870 878 2.258726 GCGAACCTGGTTGACCCAC 61.259 63.158 18.42 0.00 38.72 4.61
924 932 4.439700 CCGACGCTCAAGAGAAAGGTATAA 60.440 45.833 0.32 0.00 0.00 0.98
1080 1091 2.274760 GCAGGGGCTGAGCTTGAT 59.725 61.111 3.72 0.00 36.96 2.57
1246 1263 3.977244 CTTGCCAACACCGCCCAC 61.977 66.667 0.00 0.00 0.00 4.61
1718 1735 0.610232 AGCCCAATTCTGCAGGTGAC 60.610 55.000 15.13 5.98 0.00 3.67
1925 1942 6.017192 AGGAATCATCTCTTTAGGCGGTATA 58.983 40.000 0.00 0.00 0.00 1.47
1935 1952 6.766944 CACTGCAATAGAGGAATCATCTCTTT 59.233 38.462 0.00 0.00 41.37 2.52
1944 1961 5.846714 AGGGTATACACTGCAATAGAGGAAT 59.153 40.000 6.90 0.00 0.00 3.01
2007 2024 6.226787 CACTATCAAACCTTGGGCTATCTAG 58.773 44.000 0.00 0.00 0.00 2.43
2009 2026 4.141390 CCACTATCAAACCTTGGGCTATCT 60.141 45.833 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.