Multiple sequence alignment - TraesCS1B01G078800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G078800 chr1B 100.000 3662 0 0 1 3662 61666322 61669983 0.000000e+00 6763.0
1 TraesCS1B01G078800 chr1B 94.340 106 6 0 1 106 61651078 61651183 2.930000e-36 163.0
2 TraesCS1B01G078800 chr1D 94.897 2175 90 7 814 2988 41596747 41598900 0.000000e+00 3382.0
3 TraesCS1B01G078800 chr1D 90.250 400 33 4 3024 3419 41598902 41599299 5.420000e-143 518.0
4 TraesCS1B01G078800 chr1D 93.464 153 8 2 3510 3662 41599348 41599498 3.680000e-55 226.0
5 TraesCS1B01G078800 chr1D 85.930 199 19 4 524 722 41596416 41596605 1.720000e-48 204.0
6 TraesCS1B01G078800 chr1D 92.045 88 7 0 3416 3503 45495873 45495786 1.380000e-24 124.0
7 TraesCS1B01G078800 chr1D 87.302 63 8 0 3433 3495 334450765 334450703 5.070000e-09 73.1
8 TraesCS1B01G078800 chr1A 95.047 2039 87 4 843 2874 41712103 41714134 0.000000e+00 3193.0
9 TraesCS1B01G078800 chr1A 89.286 168 15 1 524 691 41711821 41711985 1.330000e-49 207.0
10 TraesCS1B01G078800 chr6B 91.509 106 9 0 1 106 82775887 82775992 2.950000e-31 147.0
11 TraesCS1B01G078800 chr5D 92.045 88 7 0 3413 3500 223299415 223299502 1.380000e-24 124.0
12 TraesCS1B01G078800 chr2A 87.629 97 10 2 3416 3511 12011678 12011773 1.070000e-20 111.0
13 TraesCS1B01G078800 chr2A 85.882 85 12 0 3416 3500 197535138 197535054 1.400000e-14 91.6
14 TraesCS1B01G078800 chr3B 88.372 86 10 0 3418 3503 630593207 630593292 1.800000e-18 104.0
15 TraesCS1B01G078800 chr3B 92.683 41 2 1 3460 3500 249721633 249721672 1.420000e-04 58.4
16 TraesCS1B01G078800 chr7D 91.549 71 6 0 106 176 21207080 21207150 8.370000e-17 99.0
17 TraesCS1B01G078800 chr3A 84.946 93 14 0 3413 3505 429318109 429318201 1.080000e-15 95.3
18 TraesCS1B01G078800 chr5B 88.889 72 8 0 106 177 91090671 91090742 5.040000e-14 89.8
19 TraesCS1B01G078800 chr7B 91.304 46 4 0 3456 3501 742582788 742582743 3.050000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G078800 chr1B 61666322 61669983 3661 False 6763.0 6763 100.00000 1 3662 1 chr1B.!!$F2 3661
1 TraesCS1B01G078800 chr1D 41596416 41599498 3082 False 1082.5 3382 91.13525 524 3662 4 chr1D.!!$F1 3138
2 TraesCS1B01G078800 chr1A 41711821 41714134 2313 False 1700.0 3193 92.16650 524 2874 2 chr1A.!!$F1 2350

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.035152 TCAGGCCGCTGATCAACAAT 60.035 50.0 0.0 0.0 0.0 2.71 F
1810 1913 0.037975 CAACATTGTGCTGAAGGGCC 60.038 55.0 0.0 0.0 0.0 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1914 2017 0.745845 CCAATCCTCTCCGGCACAAG 60.746 60.0 0.00 0.0 0.00 3.16 R
3372 3479 0.527565 AATGGCCAATGCTTCGTCAC 59.472 50.0 10.96 0.0 37.74 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.985188 ACGAGTGACCGTTAGTATAGTTAA 57.015 37.500 0.00 0.00 40.17 2.01
33 34 6.776094 ACGAGTGACCGTTAGTATAGTTAAC 58.224 40.000 0.00 0.00 40.17 2.01
34 35 6.371548 ACGAGTGACCGTTAGTATAGTTAACA 59.628 38.462 8.61 0.00 40.17 2.41
35 36 6.904011 CGAGTGACCGTTAGTATAGTTAACAG 59.096 42.308 8.61 0.70 31.94 3.16
36 37 7.093322 AGTGACCGTTAGTATAGTTAACAGG 57.907 40.000 8.61 9.92 34.19 4.00
37 38 5.745769 GTGACCGTTAGTATAGTTAACAGGC 59.254 44.000 8.61 0.00 32.73 4.85
38 39 5.163519 TGACCGTTAGTATAGTTAACAGGCC 60.164 44.000 8.61 0.00 32.73 5.19
39 40 4.711355 ACCGTTAGTATAGTTAACAGGCCA 59.289 41.667 5.01 0.00 32.73 5.36
40 41 5.163478 ACCGTTAGTATAGTTAACAGGCCAG 60.163 44.000 5.01 0.00 32.73 4.85
41 42 5.287226 CGTTAGTATAGTTAACAGGCCAGG 58.713 45.833 5.01 0.00 31.94 4.45
42 43 5.163478 CGTTAGTATAGTTAACAGGCCAGGT 60.163 44.000 5.01 0.00 31.94 4.00
43 44 6.628844 CGTTAGTATAGTTAACAGGCCAGGTT 60.629 42.308 15.90 15.90 31.94 3.50
44 45 5.099042 AGTATAGTTAACAGGCCAGGTTG 57.901 43.478 19.66 5.67 0.00 3.77
45 46 4.534897 AGTATAGTTAACAGGCCAGGTTGT 59.465 41.667 19.66 6.32 0.00 3.32
46 47 5.722923 AGTATAGTTAACAGGCCAGGTTGTA 59.277 40.000 19.66 10.60 0.00 2.41
47 48 3.418684 AGTTAACAGGCCAGGTTGTAG 57.581 47.619 19.66 0.00 0.00 2.74
48 49 2.709397 AGTTAACAGGCCAGGTTGTAGT 59.291 45.455 19.66 9.74 0.00 2.73
49 50 3.072211 GTTAACAGGCCAGGTTGTAGTC 58.928 50.000 19.66 5.23 0.00 2.59
50 51 1.435256 AACAGGCCAGGTTGTAGTCT 58.565 50.000 5.01 0.00 0.00 3.24
51 52 1.435256 ACAGGCCAGGTTGTAGTCTT 58.565 50.000 5.01 0.00 0.00 3.01
52 53 1.774856 ACAGGCCAGGTTGTAGTCTTT 59.225 47.619 5.01 0.00 0.00 2.52
53 54 2.154462 CAGGCCAGGTTGTAGTCTTTG 58.846 52.381 5.01 0.00 0.00 2.77
54 55 2.054799 AGGCCAGGTTGTAGTCTTTGA 58.945 47.619 5.01 0.00 0.00 2.69
55 56 2.039084 AGGCCAGGTTGTAGTCTTTGAG 59.961 50.000 5.01 0.00 0.00 3.02
56 57 1.807142 GCCAGGTTGTAGTCTTTGAGC 59.193 52.381 0.00 0.00 0.00 4.26
57 58 2.427506 CCAGGTTGTAGTCTTTGAGCC 58.572 52.381 0.00 0.00 0.00 4.70
58 59 2.224523 CCAGGTTGTAGTCTTTGAGCCA 60.225 50.000 0.00 0.00 0.00 4.75
59 60 3.476552 CAGGTTGTAGTCTTTGAGCCAA 58.523 45.455 0.00 0.00 0.00 4.52
60 61 3.251004 CAGGTTGTAGTCTTTGAGCCAAC 59.749 47.826 0.00 0.00 33.27 3.77
61 62 2.223377 GGTTGTAGTCTTTGAGCCAACG 59.777 50.000 0.00 0.00 34.49 4.10
62 63 1.508632 TGTAGTCTTTGAGCCAACGC 58.491 50.000 0.00 0.00 0.00 4.84
63 64 0.438830 GTAGTCTTTGAGCCAACGCG 59.561 55.000 3.53 3.53 41.18 6.01
64 65 0.669318 TAGTCTTTGAGCCAACGCGG 60.669 55.000 12.47 0.00 41.18 6.46
65 66 2.110213 TCTTTGAGCCAACGCGGT 59.890 55.556 12.47 0.00 41.18 5.68
66 67 2.250939 TCTTTGAGCCAACGCGGTG 61.251 57.895 19.45 19.45 41.18 4.94
67 68 3.254014 CTTTGAGCCAACGCGGTGG 62.254 63.158 38.55 38.55 41.18 4.61
78 79 3.351416 GCGGTGGGTTGGTCGTTC 61.351 66.667 0.00 0.00 0.00 3.95
79 80 3.039588 CGGTGGGTTGGTCGTTCG 61.040 66.667 0.00 0.00 0.00 3.95
80 81 3.351416 GGTGGGTTGGTCGTTCGC 61.351 66.667 0.00 0.00 0.00 4.70
81 82 2.280592 GTGGGTTGGTCGTTCGCT 60.281 61.111 0.00 0.00 0.00 4.93
82 83 1.890510 GTGGGTTGGTCGTTCGCTT 60.891 57.895 0.00 0.00 0.00 4.68
83 84 1.890041 TGGGTTGGTCGTTCGCTTG 60.890 57.895 0.00 0.00 0.00 4.01
84 85 2.613506 GGGTTGGTCGTTCGCTTGG 61.614 63.158 0.00 0.00 0.00 3.61
85 86 2.613506 GGTTGGTCGTTCGCTTGGG 61.614 63.158 0.00 0.00 0.00 4.12
86 87 2.975799 TTGGTCGTTCGCTTGGGC 60.976 61.111 0.00 0.00 0.00 5.36
115 116 3.473647 CCCATCTCAGGCCGCTGA 61.474 66.667 0.00 0.00 0.00 4.26
116 117 2.815945 CCCATCTCAGGCCGCTGAT 61.816 63.158 0.00 0.00 32.39 2.90
117 118 1.301558 CCATCTCAGGCCGCTGATC 60.302 63.158 0.00 0.00 32.39 2.92
118 119 1.444672 CATCTCAGGCCGCTGATCA 59.555 57.895 0.00 0.00 32.39 2.92
119 120 0.179065 CATCTCAGGCCGCTGATCAA 60.179 55.000 0.00 0.00 32.39 2.57
120 121 0.179062 ATCTCAGGCCGCTGATCAAC 60.179 55.000 0.00 0.00 32.39 3.18
121 122 1.078918 CTCAGGCCGCTGATCAACA 60.079 57.895 0.00 0.00 32.39 3.33
122 123 0.674581 CTCAGGCCGCTGATCAACAA 60.675 55.000 0.00 0.00 32.39 2.83
123 124 0.035152 TCAGGCCGCTGATCAACAAT 60.035 50.000 0.00 0.00 0.00 2.71
124 125 1.209261 TCAGGCCGCTGATCAACAATA 59.791 47.619 0.00 0.00 0.00 1.90
125 126 1.600957 CAGGCCGCTGATCAACAATAG 59.399 52.381 0.00 0.00 0.00 1.73
126 127 0.308993 GGCCGCTGATCAACAATAGC 59.691 55.000 0.00 0.00 0.00 2.97
127 128 1.303309 GCCGCTGATCAACAATAGCT 58.697 50.000 0.00 0.00 34.13 3.32
128 129 1.262683 GCCGCTGATCAACAATAGCTC 59.737 52.381 0.00 0.00 34.13 4.09
129 130 1.524355 CCGCTGATCAACAATAGCTCG 59.476 52.381 0.00 0.00 34.13 5.03
130 131 2.196749 CGCTGATCAACAATAGCTCGT 58.803 47.619 0.00 0.00 34.13 4.18
131 132 2.217393 CGCTGATCAACAATAGCTCGTC 59.783 50.000 0.00 0.00 34.13 4.20
132 133 2.541762 GCTGATCAACAATAGCTCGTCC 59.458 50.000 0.00 0.00 33.53 4.79
133 134 3.126831 CTGATCAACAATAGCTCGTCCC 58.873 50.000 0.00 0.00 0.00 4.46
134 135 2.128035 GATCAACAATAGCTCGTCCCG 58.872 52.381 0.00 0.00 0.00 5.14
135 136 1.179152 TCAACAATAGCTCGTCCCGA 58.821 50.000 0.00 0.00 0.00 5.14
136 137 1.135199 TCAACAATAGCTCGTCCCGAC 60.135 52.381 0.00 0.00 0.00 4.79
137 138 1.135083 CAACAATAGCTCGTCCCGACT 60.135 52.381 0.00 0.00 0.00 4.18
138 139 0.456221 ACAATAGCTCGTCCCGACTG 59.544 55.000 0.00 0.00 0.00 3.51
139 140 0.738975 CAATAGCTCGTCCCGACTGA 59.261 55.000 0.00 0.00 0.00 3.41
140 141 1.134367 CAATAGCTCGTCCCGACTGAA 59.866 52.381 0.00 0.00 0.00 3.02
141 142 0.739561 ATAGCTCGTCCCGACTGAAC 59.260 55.000 0.00 0.00 0.00 3.18
142 143 1.310933 TAGCTCGTCCCGACTGAACC 61.311 60.000 0.00 0.00 0.00 3.62
143 144 2.927580 GCTCGTCCCGACTGAACCA 61.928 63.158 0.00 0.00 0.00 3.67
144 145 1.213013 CTCGTCCCGACTGAACCAG 59.787 63.158 0.00 0.00 37.52 4.00
145 146 2.432628 CGTCCCGACTGAACCAGC 60.433 66.667 0.00 0.00 34.37 4.85
146 147 2.432628 GTCCCGACTGAACCAGCG 60.433 66.667 0.00 0.00 34.37 5.18
147 148 3.691342 TCCCGACTGAACCAGCGG 61.691 66.667 16.90 16.90 44.38 5.52
148 149 4.003788 CCCGACTGAACCAGCGGT 62.004 66.667 19.92 0.00 43.80 5.68
156 157 2.430367 AACCAGCGGTTCAGTCCC 59.570 61.111 7.08 0.00 43.05 4.46
157 158 2.147387 AACCAGCGGTTCAGTCCCT 61.147 57.895 7.08 0.00 43.05 4.20
158 159 2.046892 CCAGCGGTTCAGTCCCTG 60.047 66.667 0.00 0.00 0.00 4.45
159 160 2.743928 CAGCGGTTCAGTCCCTGC 60.744 66.667 0.00 0.00 0.00 4.85
160 161 4.021925 AGCGGTTCAGTCCCTGCC 62.022 66.667 0.00 0.00 0.00 4.85
161 162 4.021925 GCGGTTCAGTCCCTGCCT 62.022 66.667 0.00 0.00 0.00 4.75
162 163 2.750350 CGGTTCAGTCCCTGCCTT 59.250 61.111 0.00 0.00 0.00 4.35
163 164 1.672356 CGGTTCAGTCCCTGCCTTG 60.672 63.158 0.00 0.00 0.00 3.61
164 165 1.303643 GGTTCAGTCCCTGCCTTGG 60.304 63.158 0.00 0.00 0.00 3.61
165 166 1.973812 GTTCAGTCCCTGCCTTGGC 60.974 63.158 4.43 4.43 0.00 4.52
166 167 3.551496 TTCAGTCCCTGCCTTGGCG 62.551 63.158 7.18 2.22 0.00 5.69
167 168 4.020617 CAGTCCCTGCCTTGGCGA 62.021 66.667 7.18 0.00 0.00 5.54
168 169 4.021925 AGTCCCTGCCTTGGCGAC 62.022 66.667 7.18 8.36 0.00 5.19
172 173 3.726517 CCTGCCTTGGCGACGTTG 61.727 66.667 7.18 0.00 0.00 4.10
173 174 2.664851 CTGCCTTGGCGACGTTGA 60.665 61.111 7.08 0.00 0.00 3.18
174 175 2.954753 CTGCCTTGGCGACGTTGAC 61.955 63.158 7.08 3.65 0.00 3.18
175 176 2.970324 GCCTTGGCGACGTTGACA 60.970 61.111 7.43 7.43 0.00 3.58
176 177 2.935955 CCTTGGCGACGTTGACAC 59.064 61.111 12.02 0.00 0.00 3.67
177 178 1.594293 CCTTGGCGACGTTGACACT 60.594 57.895 12.02 0.00 0.00 3.55
178 179 1.157870 CCTTGGCGACGTTGACACTT 61.158 55.000 12.02 0.00 0.00 3.16
179 180 0.232303 CTTGGCGACGTTGACACTTC 59.768 55.000 12.02 0.00 0.00 3.01
180 181 1.484227 TTGGCGACGTTGACACTTCG 61.484 55.000 12.02 0.00 45.19 3.79
181 182 1.947642 GGCGACGTTGACACTTCGT 60.948 57.895 7.08 0.00 44.45 3.85
182 183 1.198397 GCGACGTTGACACTTCGTG 59.802 57.895 7.08 0.00 44.45 4.35
196 197 5.159209 ACACTTCGTGTATAACTTTCTCCG 58.841 41.667 0.00 0.00 45.56 4.63
197 198 5.048504 ACACTTCGTGTATAACTTTCTCCGA 60.049 40.000 0.00 0.00 45.56 4.55
198 199 5.285607 CACTTCGTGTATAACTTTCTCCGAC 59.714 44.000 0.00 0.00 0.00 4.79
199 200 5.182760 ACTTCGTGTATAACTTTCTCCGACT 59.817 40.000 0.00 0.00 0.00 4.18
200 201 5.227238 TCGTGTATAACTTTCTCCGACTC 57.773 43.478 0.00 0.00 0.00 3.36
201 202 4.027065 CGTGTATAACTTTCTCCGACTCG 58.973 47.826 0.00 0.00 0.00 4.18
202 203 3.790288 GTGTATAACTTTCTCCGACTCGC 59.210 47.826 0.00 0.00 0.00 5.03
203 204 3.693085 TGTATAACTTTCTCCGACTCGCT 59.307 43.478 0.00 0.00 0.00 4.93
204 205 3.870633 ATAACTTTCTCCGACTCGCTT 57.129 42.857 0.00 0.00 0.00 4.68
205 206 1.784525 AACTTTCTCCGACTCGCTTG 58.215 50.000 0.00 0.00 0.00 4.01
206 207 0.667792 ACTTTCTCCGACTCGCTTGC 60.668 55.000 0.00 0.00 0.00 4.01
207 208 1.355066 CTTTCTCCGACTCGCTTGCC 61.355 60.000 0.00 0.00 0.00 4.52
208 209 3.626680 TTCTCCGACTCGCTTGCCG 62.627 63.158 0.00 0.00 38.61 5.69
212 213 4.735132 CGACTCGCTTGCCGGGAA 62.735 66.667 8.57 8.57 40.87 3.97
213 214 2.815647 GACTCGCTTGCCGGGAAG 60.816 66.667 29.63 29.63 40.87 3.46
218 219 3.741476 GCTTGCCGGGAAGCACTG 61.741 66.667 44.22 20.08 46.46 3.66
219 220 3.058160 CTTGCCGGGAAGCACTGG 61.058 66.667 23.50 0.00 43.97 4.00
228 229 4.892965 AAGCACTGGCACCCGCAA 62.893 61.111 1.46 0.00 44.61 4.85
229 230 4.892965 AGCACTGGCACCCGCAAA 62.893 61.111 1.46 0.00 44.61 3.68
230 231 3.683937 GCACTGGCACCCGCAAAT 61.684 61.111 0.00 0.00 41.24 2.32
231 232 2.259204 CACTGGCACCCGCAAATG 59.741 61.111 0.00 0.00 41.24 2.32
232 233 2.115052 ACTGGCACCCGCAAATGA 59.885 55.556 0.00 0.00 41.24 2.57
233 234 1.304381 ACTGGCACCCGCAAATGAT 60.304 52.632 0.00 0.00 41.24 2.45
234 235 1.315257 ACTGGCACCCGCAAATGATC 61.315 55.000 0.00 0.00 41.24 2.92
235 236 1.001020 TGGCACCCGCAAATGATCT 60.001 52.632 0.00 0.00 41.24 2.75
236 237 0.254462 TGGCACCCGCAAATGATCTA 59.746 50.000 0.00 0.00 41.24 1.98
237 238 0.663153 GGCACCCGCAAATGATCTAC 59.337 55.000 0.00 0.00 41.24 2.59
238 239 1.378531 GCACCCGCAAATGATCTACA 58.621 50.000 0.00 0.00 38.36 2.74
239 240 1.331756 GCACCCGCAAATGATCTACAG 59.668 52.381 0.00 0.00 38.36 2.74
240 241 2.905075 CACCCGCAAATGATCTACAGA 58.095 47.619 0.00 0.00 0.00 3.41
241 242 3.470709 CACCCGCAAATGATCTACAGAT 58.529 45.455 0.00 0.00 37.51 2.90
242 243 6.085808 GCACCCGCAAATGATCTACAGATC 62.086 50.000 11.56 11.56 43.54 2.75
275 276 8.669946 TTCTTGTGTATTCAAACTGTATGACA 57.330 30.769 0.00 0.00 0.00 3.58
288 289 4.174009 CTGTATGACAGTGGTTAAGGACG 58.826 47.826 0.00 0.00 41.19 4.79
289 290 3.575256 TGTATGACAGTGGTTAAGGACGT 59.425 43.478 0.00 0.00 0.00 4.34
290 291 2.519377 TGACAGTGGTTAAGGACGTG 57.481 50.000 0.00 0.00 0.00 4.49
291 292 2.033372 TGACAGTGGTTAAGGACGTGA 58.967 47.619 0.00 0.00 0.00 4.35
292 293 2.431419 TGACAGTGGTTAAGGACGTGAA 59.569 45.455 0.00 0.00 0.00 3.18
293 294 3.057734 GACAGTGGTTAAGGACGTGAAG 58.942 50.000 0.00 0.00 0.00 3.02
294 295 2.696707 ACAGTGGTTAAGGACGTGAAGA 59.303 45.455 0.00 0.00 0.00 2.87
295 296 3.133362 ACAGTGGTTAAGGACGTGAAGAA 59.867 43.478 0.00 0.00 0.00 2.52
296 297 3.741344 CAGTGGTTAAGGACGTGAAGAAG 59.259 47.826 0.00 0.00 0.00 2.85
297 298 3.640029 AGTGGTTAAGGACGTGAAGAAGA 59.360 43.478 0.00 0.00 0.00 2.87
298 299 4.100498 AGTGGTTAAGGACGTGAAGAAGAA 59.900 41.667 0.00 0.00 0.00 2.52
299 300 4.812626 GTGGTTAAGGACGTGAAGAAGAAA 59.187 41.667 0.00 0.00 0.00 2.52
300 301 5.469084 GTGGTTAAGGACGTGAAGAAGAAAT 59.531 40.000 0.00 0.00 0.00 2.17
301 302 6.017357 GTGGTTAAGGACGTGAAGAAGAAATT 60.017 38.462 0.00 0.00 0.00 1.82
302 303 6.544564 TGGTTAAGGACGTGAAGAAGAAATTT 59.455 34.615 0.00 0.00 0.00 1.82
303 304 7.067737 TGGTTAAGGACGTGAAGAAGAAATTTT 59.932 33.333 0.00 0.00 0.00 1.82
304 305 7.378728 GGTTAAGGACGTGAAGAAGAAATTTTG 59.621 37.037 0.00 0.00 0.00 2.44
305 306 6.693315 AAGGACGTGAAGAAGAAATTTTGA 57.307 33.333 0.00 0.00 0.00 2.69
306 307 6.305693 AGGACGTGAAGAAGAAATTTTGAG 57.694 37.500 0.00 0.00 0.00 3.02
307 308 5.239525 AGGACGTGAAGAAGAAATTTTGAGG 59.760 40.000 0.00 0.00 0.00 3.86
308 309 4.860072 ACGTGAAGAAGAAATTTTGAGGC 58.140 39.130 0.00 0.00 0.00 4.70
309 310 4.580580 ACGTGAAGAAGAAATTTTGAGGCT 59.419 37.500 0.00 0.00 0.00 4.58
310 311 4.913924 CGTGAAGAAGAAATTTTGAGGCTG 59.086 41.667 0.00 0.00 0.00 4.85
311 312 5.277974 CGTGAAGAAGAAATTTTGAGGCTGA 60.278 40.000 0.00 0.00 0.00 4.26
312 313 6.569226 CGTGAAGAAGAAATTTTGAGGCTGAT 60.569 38.462 0.00 0.00 0.00 2.90
313 314 7.361201 CGTGAAGAAGAAATTTTGAGGCTGATA 60.361 37.037 0.00 0.00 0.00 2.15
314 315 8.465201 GTGAAGAAGAAATTTTGAGGCTGATAT 58.535 33.333 0.00 0.00 0.00 1.63
315 316 8.464404 TGAAGAAGAAATTTTGAGGCTGATATG 58.536 33.333 0.00 0.00 0.00 1.78
316 317 7.344095 AGAAGAAATTTTGAGGCTGATATGG 57.656 36.000 0.00 0.00 0.00 2.74
317 318 6.894103 AGAAGAAATTTTGAGGCTGATATGGT 59.106 34.615 0.00 0.00 0.00 3.55
318 319 6.461110 AGAAATTTTGAGGCTGATATGGTG 57.539 37.500 0.00 0.00 0.00 4.17
319 320 4.660789 AATTTTGAGGCTGATATGGTGC 57.339 40.909 0.00 0.00 0.00 5.01
320 321 2.057137 TTTGAGGCTGATATGGTGCC 57.943 50.000 0.00 0.00 46.42 5.01
324 325 3.731716 GGCTGATATGGTGCCATCA 57.268 52.632 7.03 0.81 45.46 3.07
325 326 2.211250 GGCTGATATGGTGCCATCAT 57.789 50.000 7.03 0.00 45.46 2.45
326 327 2.089980 GGCTGATATGGTGCCATCATC 58.910 52.381 7.03 9.49 45.46 2.92
327 328 2.553685 GGCTGATATGGTGCCATCATCA 60.554 50.000 7.03 12.81 45.46 3.07
328 329 3.151554 GCTGATATGGTGCCATCATCAA 58.848 45.455 7.03 0.00 36.81 2.57
329 330 3.570975 GCTGATATGGTGCCATCATCAAA 59.429 43.478 7.03 0.00 36.81 2.69
330 331 4.321008 GCTGATATGGTGCCATCATCAAAG 60.321 45.833 7.03 6.37 36.81 2.77
331 332 5.051409 TGATATGGTGCCATCATCAAAGA 57.949 39.130 7.03 0.00 36.81 2.52
332 333 5.447757 TGATATGGTGCCATCATCAAAGAA 58.552 37.500 7.03 0.00 36.81 2.52
333 334 5.892686 TGATATGGTGCCATCATCAAAGAAA 59.107 36.000 7.03 0.00 36.81 2.52
334 335 6.380560 TGATATGGTGCCATCATCAAAGAAAA 59.619 34.615 7.03 0.00 36.81 2.29
335 336 5.687166 ATGGTGCCATCATCAAAGAAAAT 57.313 34.783 0.00 0.00 36.81 1.82
336 337 5.486735 TGGTGCCATCATCAAAGAAAATT 57.513 34.783 0.00 0.00 28.67 1.82
337 338 6.602410 TGGTGCCATCATCAAAGAAAATTA 57.398 33.333 0.00 0.00 28.67 1.40
338 339 7.002250 TGGTGCCATCATCAAAGAAAATTAA 57.998 32.000 0.00 0.00 28.67 1.40
339 340 7.622713 TGGTGCCATCATCAAAGAAAATTAAT 58.377 30.769 0.00 0.00 28.67 1.40
340 341 7.549842 TGGTGCCATCATCAAAGAAAATTAATG 59.450 33.333 0.00 0.00 28.67 1.90
341 342 7.404203 GTGCCATCATCAAAGAAAATTAATGC 58.596 34.615 0.00 0.00 0.00 3.56
342 343 7.064847 GTGCCATCATCAAAGAAAATTAATGCA 59.935 33.333 0.00 0.00 0.00 3.96
343 344 7.606839 TGCCATCATCAAAGAAAATTAATGCAA 59.393 29.630 0.00 0.00 0.00 4.08
344 345 8.120465 GCCATCATCAAAGAAAATTAATGCAAG 58.880 33.333 0.00 0.00 0.00 4.01
345 346 9.373603 CCATCATCAAAGAAAATTAATGCAAGA 57.626 29.630 0.00 0.00 0.00 3.02
354 355 9.649167 AAGAAAATTAATGCAAGATCAAAGGAG 57.351 29.630 0.00 0.00 0.00 3.69
355 356 8.810041 AGAAAATTAATGCAAGATCAAAGGAGT 58.190 29.630 0.00 0.00 0.00 3.85
356 357 9.428097 GAAAATTAATGCAAGATCAAAGGAGTT 57.572 29.630 0.00 0.00 0.00 3.01
357 358 8.992835 AAATTAATGCAAGATCAAAGGAGTTC 57.007 30.769 0.00 0.00 0.00 3.01
358 359 4.691860 AATGCAAGATCAAAGGAGTTCG 57.308 40.909 0.00 0.00 0.00 3.95
359 360 3.401033 TGCAAGATCAAAGGAGTTCGA 57.599 42.857 0.00 0.00 0.00 3.71
360 361 3.738982 TGCAAGATCAAAGGAGTTCGAA 58.261 40.909 0.00 0.00 0.00 3.71
361 362 4.133820 TGCAAGATCAAAGGAGTTCGAAA 58.866 39.130 0.00 0.00 0.00 3.46
362 363 4.214119 TGCAAGATCAAAGGAGTTCGAAAG 59.786 41.667 0.00 0.00 0.00 2.62
363 364 4.716943 CAAGATCAAAGGAGTTCGAAAGC 58.283 43.478 0.00 0.00 0.00 3.51
364 365 4.278975 AGATCAAAGGAGTTCGAAAGCT 57.721 40.909 0.00 0.00 0.00 3.74
365 366 3.999663 AGATCAAAGGAGTTCGAAAGCTG 59.000 43.478 0.00 0.00 0.00 4.24
366 367 1.873591 TCAAAGGAGTTCGAAAGCTGC 59.126 47.619 0.00 0.00 0.00 5.25
367 368 1.603802 CAAAGGAGTTCGAAAGCTGCA 59.396 47.619 0.00 0.00 0.00 4.41
368 369 1.967319 AAGGAGTTCGAAAGCTGCAA 58.033 45.000 0.00 0.00 0.00 4.08
369 370 1.967319 AGGAGTTCGAAAGCTGCAAA 58.033 45.000 0.00 0.00 0.00 3.68
370 371 2.508526 AGGAGTTCGAAAGCTGCAAAT 58.491 42.857 0.00 0.00 0.00 2.32
371 372 2.887152 AGGAGTTCGAAAGCTGCAAATT 59.113 40.909 0.00 0.00 0.00 1.82
372 373 3.057946 AGGAGTTCGAAAGCTGCAAATTC 60.058 43.478 0.00 2.68 0.00 2.17
373 374 3.304659 GGAGTTCGAAAGCTGCAAATTCA 60.305 43.478 0.00 0.00 0.00 2.57
374 375 4.479619 GAGTTCGAAAGCTGCAAATTCAT 58.520 39.130 0.00 0.00 0.00 2.57
375 376 4.874970 AGTTCGAAAGCTGCAAATTCATT 58.125 34.783 0.00 0.00 0.00 2.57
376 377 4.919754 AGTTCGAAAGCTGCAAATTCATTC 59.080 37.500 0.00 0.00 0.00 2.67
377 378 4.502171 TCGAAAGCTGCAAATTCATTCA 57.498 36.364 1.02 0.00 0.00 2.57
378 379 5.063180 TCGAAAGCTGCAAATTCATTCAT 57.937 34.783 1.02 0.00 0.00 2.57
379 380 4.860352 TCGAAAGCTGCAAATTCATTCATG 59.140 37.500 1.02 0.00 0.00 3.07
380 381 4.860352 CGAAAGCTGCAAATTCATTCATGA 59.140 37.500 1.02 0.00 34.44 3.07
381 382 5.004440 CGAAAGCTGCAAATTCATTCATGAG 59.996 40.000 1.02 0.00 38.19 2.90
382 383 5.654603 AAGCTGCAAATTCATTCATGAGA 57.345 34.783 1.02 0.00 38.19 3.27
383 384 5.250235 AGCTGCAAATTCATTCATGAGAG 57.750 39.130 1.02 0.00 38.19 3.20
384 385 4.705507 AGCTGCAAATTCATTCATGAGAGT 59.294 37.500 1.02 0.00 38.19 3.24
385 386 5.884232 AGCTGCAAATTCATTCATGAGAGTA 59.116 36.000 1.02 0.00 38.19 2.59
386 387 6.038382 AGCTGCAAATTCATTCATGAGAGTAG 59.962 38.462 1.02 0.00 38.19 2.57
387 388 6.183360 GCTGCAAATTCATTCATGAGAGTAGT 60.183 38.462 0.00 0.00 38.19 2.73
388 389 7.011763 GCTGCAAATTCATTCATGAGAGTAGTA 59.988 37.037 0.00 0.00 38.19 1.82
389 390 8.429493 TGCAAATTCATTCATGAGAGTAGTAG 57.571 34.615 0.00 0.00 38.19 2.57
390 391 8.260114 TGCAAATTCATTCATGAGAGTAGTAGA 58.740 33.333 0.00 0.00 38.19 2.59
391 392 9.102757 GCAAATTCATTCATGAGAGTAGTAGAA 57.897 33.333 0.00 0.00 38.19 2.10
441 442 9.785982 AGCTAAATTTTCTTTGTCTCTAGACTT 57.214 29.630 11.22 0.00 44.99 3.01
448 449 9.584008 TTTTCTTTGTCTCTAGACTTAGGTAGA 57.416 33.333 11.22 3.14 44.99 2.59
449 450 8.564509 TTCTTTGTCTCTAGACTTAGGTAGAC 57.435 38.462 11.22 0.00 44.99 2.59
450 451 7.687388 TCTTTGTCTCTAGACTTAGGTAGACA 58.313 38.462 11.22 4.66 44.99 3.41
451 452 8.330247 TCTTTGTCTCTAGACTTAGGTAGACAT 58.670 37.037 11.22 0.00 44.99 3.06
452 453 7.867305 TTGTCTCTAGACTTAGGTAGACATG 57.133 40.000 11.22 0.00 44.99 3.21
453 454 6.959904 TGTCTCTAGACTTAGGTAGACATGT 58.040 40.000 11.22 0.00 44.99 3.21
454 455 7.403671 TGTCTCTAGACTTAGGTAGACATGTT 58.596 38.462 11.22 0.00 44.99 2.71
455 456 7.889073 TGTCTCTAGACTTAGGTAGACATGTTT 59.111 37.037 11.22 0.00 44.99 2.83
456 457 8.185505 GTCTCTAGACTTAGGTAGACATGTTTG 58.814 40.741 0.00 0.00 41.65 2.93
457 458 8.107729 TCTCTAGACTTAGGTAGACATGTTTGA 58.892 37.037 0.00 0.00 0.00 2.69
458 459 8.824756 TCTAGACTTAGGTAGACATGTTTGAT 57.175 34.615 0.00 0.00 0.00 2.57
459 460 9.256228 TCTAGACTTAGGTAGACATGTTTGATT 57.744 33.333 0.00 0.00 0.00 2.57
460 461 9.307121 CTAGACTTAGGTAGACATGTTTGATTG 57.693 37.037 0.00 0.00 0.00 2.67
461 462 7.907389 AGACTTAGGTAGACATGTTTGATTGA 58.093 34.615 0.00 0.00 0.00 2.57
462 463 8.543774 AGACTTAGGTAGACATGTTTGATTGAT 58.456 33.333 0.00 0.00 0.00 2.57
463 464 9.167311 GACTTAGGTAGACATGTTTGATTGATT 57.833 33.333 0.00 0.00 0.00 2.57
464 465 9.167311 ACTTAGGTAGACATGTTTGATTGATTC 57.833 33.333 0.00 0.00 0.00 2.52
465 466 9.166173 CTTAGGTAGACATGTTTGATTGATTCA 57.834 33.333 0.00 0.00 0.00 2.57
466 467 9.685276 TTAGGTAGACATGTTTGATTGATTCAT 57.315 29.630 0.00 0.00 33.34 2.57
467 468 8.218338 AGGTAGACATGTTTGATTGATTCATC 57.782 34.615 0.00 0.00 33.34 2.92
468 469 8.051535 AGGTAGACATGTTTGATTGATTCATCT 58.948 33.333 0.00 0.00 33.34 2.90
469 470 8.127327 GGTAGACATGTTTGATTGATTCATCTG 58.873 37.037 0.00 0.00 33.34 2.90
470 471 6.561614 AGACATGTTTGATTGATTCATCTGC 58.438 36.000 0.00 0.00 33.34 4.26
471 472 6.152154 AGACATGTTTGATTGATTCATCTGCA 59.848 34.615 0.00 0.00 33.34 4.41
472 473 6.873997 ACATGTTTGATTGATTCATCTGCAT 58.126 32.000 0.00 0.00 33.34 3.96
473 474 6.756542 ACATGTTTGATTGATTCATCTGCATG 59.243 34.615 0.00 0.00 36.50 4.06
474 475 6.518208 TGTTTGATTGATTCATCTGCATGA 57.482 33.333 0.00 0.00 37.24 3.07
475 476 7.107639 TGTTTGATTGATTCATCTGCATGAT 57.892 32.000 0.00 0.00 38.89 2.45
476 477 8.228035 TGTTTGATTGATTCATCTGCATGATA 57.772 30.769 0.00 0.00 38.89 2.15
477 478 8.856103 TGTTTGATTGATTCATCTGCATGATAT 58.144 29.630 0.00 0.00 38.89 1.63
478 479 9.692749 GTTTGATTGATTCATCTGCATGATATT 57.307 29.630 0.00 0.00 38.89 1.28
479 480 9.691362 TTTGATTGATTCATCTGCATGATATTG 57.309 29.630 0.00 0.00 38.89 1.90
480 481 8.404107 TGATTGATTCATCTGCATGATATTGT 57.596 30.769 0.00 0.00 38.89 2.71
481 482 9.509956 TGATTGATTCATCTGCATGATATTGTA 57.490 29.630 0.00 0.00 38.89 2.41
485 486 9.509956 TGATTCATCTGCATGATATTGTAATGA 57.490 29.630 0.00 0.00 38.89 2.57
488 489 8.502105 TCATCTGCATGATATTGTAATGATCC 57.498 34.615 0.00 0.00 33.80 3.36
489 490 7.555195 TCATCTGCATGATATTGTAATGATCCC 59.445 37.037 0.00 0.00 33.80 3.85
490 491 7.024345 TCTGCATGATATTGTAATGATCCCT 57.976 36.000 0.00 0.00 0.00 4.20
491 492 7.464273 TCTGCATGATATTGTAATGATCCCTT 58.536 34.615 0.00 0.00 0.00 3.95
492 493 7.946219 TCTGCATGATATTGTAATGATCCCTTT 59.054 33.333 0.00 0.00 0.00 3.11
493 494 7.888424 TGCATGATATTGTAATGATCCCTTTG 58.112 34.615 0.00 0.00 0.00 2.77
494 495 7.724951 TGCATGATATTGTAATGATCCCTTTGA 59.275 33.333 0.00 0.00 0.00 2.69
495 496 8.579006 GCATGATATTGTAATGATCCCTTTGAA 58.421 33.333 0.00 0.00 0.00 2.69
496 497 9.903682 CATGATATTGTAATGATCCCTTTGAAC 57.096 33.333 0.00 0.00 0.00 3.18
497 498 9.872684 ATGATATTGTAATGATCCCTTTGAACT 57.127 29.630 0.00 0.00 0.00 3.01
498 499 9.699410 TGATATTGTAATGATCCCTTTGAACTT 57.301 29.630 0.00 0.00 0.00 2.66
504 505 9.527157 TGTAATGATCCCTTTGAACTTATTTGA 57.473 29.630 0.00 0.00 0.00 2.69
560 561 5.453567 TCACTCCATATGAAGATACCGTG 57.546 43.478 3.65 0.00 0.00 4.94
597 598 3.539253 GCACATTTAGCATGCCTCG 57.461 52.632 15.66 1.08 33.06 4.63
608 609 4.460948 AGCATGCCTCGAATTCATTTTT 57.539 36.364 15.66 0.00 0.00 1.94
651 652 2.427812 TGTGTATAGATTTCGCACGGGA 59.572 45.455 0.00 0.00 33.23 5.14
687 688 7.878127 AGGAGAAGTTTGAATTCGTTCTATTCA 59.122 33.333 10.46 0.00 39.54 2.57
697 698 8.982685 TGAATTCGTTCTATTCAGATATTGAGC 58.017 33.333 0.04 0.00 37.15 4.26
698 699 6.993175 TTCGTTCTATTCAGATATTGAGCG 57.007 37.500 0.00 0.00 37.07 5.03
708 709 3.941483 CAGATATTGAGCGGTCTTGGTTT 59.059 43.478 16.64 0.00 0.00 3.27
709 710 3.941483 AGATATTGAGCGGTCTTGGTTTG 59.059 43.478 16.64 0.00 0.00 2.93
722 723 6.704050 CGGTCTTGGTTTGAAATGGTTTAATT 59.296 34.615 0.00 0.00 0.00 1.40
723 724 7.225734 CGGTCTTGGTTTGAAATGGTTTAATTT 59.774 33.333 0.00 0.00 32.43 1.82
724 725 8.898761 GGTCTTGGTTTGAAATGGTTTAATTTT 58.101 29.630 0.00 0.00 29.89 1.82
775 776 7.201635 GGCTATTTGAAATGGTTTAATTGCCTG 60.202 37.037 0.00 0.00 41.06 4.85
830 926 4.905429 TGAGCTTGCTAAAGTTATGTCCA 58.095 39.130 0.00 0.00 35.69 4.02
869 965 2.742348 TGGAAGCCCAGATACGTTAGA 58.258 47.619 0.00 0.00 37.58 2.10
913 1010 0.662085 GGGCTTCGTAGTCTCGTAGG 59.338 60.000 0.00 0.00 0.00 3.18
914 1011 1.377536 GGCTTCGTAGTCTCGTAGGT 58.622 55.000 0.00 0.00 0.00 3.08
915 1012 1.063764 GGCTTCGTAGTCTCGTAGGTG 59.936 57.143 0.00 0.00 0.00 4.00
916 1013 1.736681 GCTTCGTAGTCTCGTAGGTGT 59.263 52.381 0.00 0.00 0.00 4.16
917 1014 2.932614 GCTTCGTAGTCTCGTAGGTGTA 59.067 50.000 0.00 0.00 0.00 2.90
918 1015 3.001127 GCTTCGTAGTCTCGTAGGTGTAG 59.999 52.174 0.00 0.00 0.00 2.74
919 1016 4.428209 CTTCGTAGTCTCGTAGGTGTAGA 58.572 47.826 0.00 0.00 0.00 2.59
1081 1178 0.623324 CCACCCATACCCTTCCCTCA 60.623 60.000 0.00 0.00 0.00 3.86
1118 1215 2.668212 CCTCAAACCGCGCCTCAA 60.668 61.111 0.00 0.00 0.00 3.02
1263 1360 4.240103 TCCATGGCGGGCATCGAG 62.240 66.667 14.79 6.73 42.43 4.04
1527 1630 4.003788 AGGACCGACAACGCCCTG 62.004 66.667 0.00 0.00 38.71 4.45
1695 1798 2.341318 TCATCACCTACAACGTCGTG 57.659 50.000 0.00 0.00 0.00 4.35
1757 1860 1.003003 GGAGTTCTTGAAGAGCCTGCT 59.997 52.381 5.39 0.00 0.00 4.24
1762 1865 0.324285 CTTGAAGAGCCTGCTGTCCT 59.676 55.000 0.00 0.00 0.00 3.85
1764 1867 1.871418 TGAAGAGCCTGCTGTCCTAT 58.129 50.000 0.00 0.00 0.00 2.57
1776 1879 1.048160 TGTCCTATGGATGCGAGCCA 61.048 55.000 0.00 0.00 40.24 4.75
1782 1885 1.647545 ATGGATGCGAGCCAAACACG 61.648 55.000 0.00 0.00 39.21 4.49
1801 1904 1.135972 CGGTCAGCTACAACATTGTGC 60.136 52.381 7.53 8.81 42.31 4.57
1810 1913 0.037975 CAACATTGTGCTGAAGGGCC 60.038 55.000 0.00 0.00 0.00 5.80
1959 2062 2.481854 CCTGCGATGGAGATTCTTGAG 58.518 52.381 0.00 0.00 0.00 3.02
2019 2122 2.264005 ACAACCCAATACTTCACGCA 57.736 45.000 0.00 0.00 0.00 5.24
2079 2182 1.072331 GTGGAACTGATGGTGTCCAGT 59.928 52.381 0.00 0.00 44.69 4.00
2175 2278 3.198863 GTTGAGCTGCTTCATCAACTG 57.801 47.619 19.29 0.00 45.91 3.16
2265 2368 4.319177 GCAAGACAGAGGAAGCTTTAGAA 58.681 43.478 0.00 0.00 0.00 2.10
2283 2386 4.298103 AGAACTGCTGAATGAGATGGTT 57.702 40.909 0.00 0.00 0.00 3.67
2298 2401 0.854218 TGGTTACCAAAGGGCTCCAA 59.146 50.000 0.00 0.00 37.90 3.53
2442 2545 0.179108 ACGCGATACTTCTTGGGCTC 60.179 55.000 15.93 0.00 0.00 4.70
2491 2594 7.648112 GTGCTATCGATCTGTTTACTTACATGA 59.352 37.037 0.00 0.00 0.00 3.07
2496 2599 8.950403 TCGATCTGTTTACTTACATGATATCG 57.050 34.615 0.00 0.00 33.02 2.92
2607 2710 0.972134 CTGAGTTGTGCTCCAGAGGA 59.028 55.000 0.00 0.00 43.48 3.71
2643 2746 5.201243 ACTTTGGTAAATAAGGGAGCCATC 58.799 41.667 0.00 0.00 0.00 3.51
2662 2765 3.410631 TCCGGTTACTTGATGCTTGAA 57.589 42.857 0.00 0.00 0.00 2.69
2690 2793 9.774742 GAACTATGCATACTTAAAAAGGTTGAG 57.225 33.333 1.16 0.00 0.00 3.02
2730 2833 5.529060 GTGTGGATCCAGGAATATGTTCTTC 59.471 44.000 16.81 0.00 34.68 2.87
2792 2895 5.354054 AATGATGTCTTATTCGATGCTGC 57.646 39.130 0.00 0.00 0.00 5.25
2793 2896 3.133691 TGATGTCTTATTCGATGCTGCC 58.866 45.455 0.00 0.00 0.00 4.85
2813 2916 4.937620 TGCCTTCTTATGAACATGTGAGTC 59.062 41.667 0.00 0.00 0.00 3.36
2885 2988 7.963532 ACAAACTTGTACAGGATTCTTCTCTA 58.036 34.615 12.54 0.00 40.16 2.43
2941 3044 2.483106 TCGTCTCCGTAGAACTGTTCTG 59.517 50.000 28.46 15.23 40.94 3.02
2950 3053 5.047847 CGTAGAACTGTTCTGACTGGAAAA 58.952 41.667 28.46 6.55 40.94 2.29
2992 3095 9.442047 AGATTACACAGACTAAAGAAAGGATTG 57.558 33.333 0.00 0.00 0.00 2.67
2993 3096 5.948992 ACACAGACTAAAGAAAGGATTGC 57.051 39.130 0.00 0.00 0.00 3.56
2994 3097 5.376625 ACACAGACTAAAGAAAGGATTGCA 58.623 37.500 0.00 0.00 0.00 4.08
2995 3098 6.006449 ACACAGACTAAAGAAAGGATTGCAT 58.994 36.000 0.00 0.00 0.00 3.96
2996 3099 6.491403 ACACAGACTAAAGAAAGGATTGCATT 59.509 34.615 0.00 0.00 0.00 3.56
2997 3100 6.805271 CACAGACTAAAGAAAGGATTGCATTG 59.195 38.462 0.00 0.00 0.00 2.82
2998 3101 6.716628 ACAGACTAAAGAAAGGATTGCATTGA 59.283 34.615 0.00 0.00 0.00 2.57
2999 3102 7.025963 CAGACTAAAGAAAGGATTGCATTGAC 58.974 38.462 0.00 0.00 0.00 3.18
3000 3103 6.716628 AGACTAAAGAAAGGATTGCATTGACA 59.283 34.615 0.00 0.00 0.00 3.58
3001 3104 6.681777 ACTAAAGAAAGGATTGCATTGACAC 58.318 36.000 0.00 0.00 0.00 3.67
3002 3105 5.796424 AAAGAAAGGATTGCATTGACACT 57.204 34.783 0.00 0.00 0.00 3.55
3003 3106 5.382618 AAGAAAGGATTGCATTGACACTC 57.617 39.130 0.00 0.00 0.00 3.51
3004 3107 4.660168 AGAAAGGATTGCATTGACACTCT 58.340 39.130 0.00 0.00 0.00 3.24
3005 3108 5.809001 AGAAAGGATTGCATTGACACTCTA 58.191 37.500 0.00 0.00 0.00 2.43
3006 3109 6.421485 AGAAAGGATTGCATTGACACTCTAT 58.579 36.000 0.00 0.00 0.00 1.98
3007 3110 6.888632 AGAAAGGATTGCATTGACACTCTATT 59.111 34.615 0.00 0.00 0.00 1.73
3008 3111 6.690194 AAGGATTGCATTGACACTCTATTC 57.310 37.500 0.00 0.00 0.00 1.75
3009 3112 5.999044 AGGATTGCATTGACACTCTATTCT 58.001 37.500 0.00 0.00 0.00 2.40
3010 3113 5.821470 AGGATTGCATTGACACTCTATTCTG 59.179 40.000 0.00 0.00 0.00 3.02
3011 3114 5.819379 GGATTGCATTGACACTCTATTCTGA 59.181 40.000 0.00 0.00 0.00 3.27
3012 3115 6.485984 GGATTGCATTGACACTCTATTCTGAT 59.514 38.462 0.00 0.00 0.00 2.90
3013 3116 7.013083 GGATTGCATTGACACTCTATTCTGATT 59.987 37.037 0.00 0.00 0.00 2.57
3014 3117 6.915544 TGCATTGACACTCTATTCTGATTC 57.084 37.500 0.00 0.00 0.00 2.52
3015 3118 6.408869 TGCATTGACACTCTATTCTGATTCA 58.591 36.000 0.00 0.00 0.00 2.57
3016 3119 6.880529 TGCATTGACACTCTATTCTGATTCAA 59.119 34.615 0.00 0.00 0.00 2.69
3017 3120 7.391275 TGCATTGACACTCTATTCTGATTCAAA 59.609 33.333 0.00 0.00 0.00 2.69
3018 3121 7.695618 GCATTGACACTCTATTCTGATTCAAAC 59.304 37.037 0.00 0.00 0.00 2.93
3019 3122 8.944029 CATTGACACTCTATTCTGATTCAAACT 58.056 33.333 0.00 0.00 0.00 2.66
3021 3124 8.988064 TGACACTCTATTCTGATTCAAACTAC 57.012 34.615 0.00 0.00 0.00 2.73
3022 3125 8.807118 TGACACTCTATTCTGATTCAAACTACT 58.193 33.333 0.00 0.00 0.00 2.57
3036 3139 6.486253 TCAAACTACTTATGCTGCTTTCTG 57.514 37.500 0.00 0.00 0.00 3.02
3053 3156 3.156511 TCTGAGCTGAGTTCGCAATAG 57.843 47.619 0.00 0.00 0.00 1.73
3127 3231 9.860898 GATACATAAATTTTCTGAAGTTTGCCT 57.139 29.630 0.00 0.00 0.00 4.75
3136 3240 3.008375 TCTGAAGTTTGCCTATCTGCTGT 59.992 43.478 0.00 0.00 0.00 4.40
3148 3252 5.777802 CCTATCTGCTGTAACTATCCACTG 58.222 45.833 0.00 0.00 0.00 3.66
3151 3255 4.344978 TCTGCTGTAACTATCCACTGAGT 58.655 43.478 0.00 0.00 0.00 3.41
3153 3257 5.073311 TGCTGTAACTATCCACTGAGTTC 57.927 43.478 0.00 0.00 37.16 3.01
3165 3269 3.191371 CCACTGAGTTCTTTGGTTATGCC 59.809 47.826 0.00 0.00 37.90 4.40
3231 3338 3.508845 ACACCTGCATTTACTCTGGTT 57.491 42.857 0.00 0.00 33.11 3.67
3232 3339 4.634012 ACACCTGCATTTACTCTGGTTA 57.366 40.909 0.00 0.00 33.11 2.85
3236 3343 5.237344 CACCTGCATTTACTCTGGTTATAGC 59.763 44.000 0.00 0.00 33.11 2.97
3305 3412 2.053627 GAAACTTCAGTTGGCATTGCG 58.946 47.619 1.91 0.00 38.44 4.85
3315 3422 0.734309 TGGCATTGCGCTGTTCATAG 59.266 50.000 9.73 0.00 41.91 2.23
3337 3444 2.964464 TGTTGGATCCATGCAGTTTGTT 59.036 40.909 17.06 0.00 0.00 2.83
3362 3469 5.622346 TTCCCAGTTTGCATAAAAAGGTT 57.378 34.783 0.00 0.00 0.00 3.50
3367 3474 8.214364 TCCCAGTTTGCATAAAAAGGTTATTTT 58.786 29.630 0.00 0.00 36.52 1.82
3368 3475 8.288913 CCCAGTTTGCATAAAAAGGTTATTTTG 58.711 33.333 0.00 0.00 34.51 2.44
3389 3496 1.971167 GGTGACGAAGCATTGGCCA 60.971 57.895 0.00 0.00 42.56 5.36
3401 3508 1.475280 CATTGGCCATTGGTCAGAGTG 59.525 52.381 18.15 7.45 39.05 3.51
3402 3509 0.770499 TTGGCCATTGGTCAGAGTGA 59.230 50.000 6.09 0.00 39.05 3.41
3403 3510 0.036732 TGGCCATTGGTCAGAGTGAC 59.963 55.000 5.72 0.00 46.23 3.67
3419 3526 8.770828 GTCAGAGTGACAGAGTAGATATTACTC 58.229 40.741 13.10 13.10 46.22 2.59
3420 3527 7.934665 TCAGAGTGACAGAGTAGATATTACTCC 59.065 40.741 15.56 6.93 43.61 3.85
3421 3528 7.174253 CAGAGTGACAGAGTAGATATTACTCCC 59.826 44.444 15.56 9.69 43.61 4.30
3422 3529 7.073215 AGAGTGACAGAGTAGATATTACTCCCT 59.927 40.741 15.56 6.62 43.61 4.20
3423 3530 7.228590 AGTGACAGAGTAGATATTACTCCCTC 58.771 42.308 15.56 12.35 43.61 4.30
3424 3531 7.073215 AGTGACAGAGTAGATATTACTCCCTCT 59.927 40.741 15.56 11.02 43.61 3.69
3425 3532 7.174253 GTGACAGAGTAGATATTACTCCCTCTG 59.826 44.444 11.14 11.14 43.61 3.35
3427 3534 8.277720 ACAGAGTAGATATTACTCCCTCTGTA 57.722 38.462 15.52 0.00 45.90 2.74
3428 3535 8.158789 ACAGAGTAGATATTACTCCCTCTGTAC 58.841 40.741 15.52 0.00 45.90 2.90
3429 3536 7.332430 CAGAGTAGATATTACTCCCTCTGTACG 59.668 44.444 15.56 0.00 43.61 3.67
3430 3537 6.474630 AGTAGATATTACTCCCTCTGTACGG 58.525 44.000 0.00 0.00 0.00 4.02
3431 3538 5.579753 AGATATTACTCCCTCTGTACGGA 57.420 43.478 3.91 3.91 0.00 4.69
3432 3539 5.950023 AGATATTACTCCCTCTGTACGGAA 58.050 41.667 5.76 0.00 0.00 4.30
3433 3540 6.371278 AGATATTACTCCCTCTGTACGGAAA 58.629 40.000 5.76 0.00 0.00 3.13
3435 3542 8.168725 AGATATTACTCCCTCTGTACGGAAATA 58.831 37.037 5.76 6.32 0.00 1.40
3436 3543 8.896722 ATATTACTCCCTCTGTACGGAAATAT 57.103 34.615 5.76 8.23 0.00 1.28
3438 3545 8.716674 ATTACTCCCTCTGTACGGAAATATAA 57.283 34.615 5.76 2.38 0.00 0.98
3439 3546 6.651975 ACTCCCTCTGTACGGAAATATAAG 57.348 41.667 5.76 1.10 0.00 1.73
3441 3548 6.490721 ACTCCCTCTGTACGGAAATATAAGAG 59.509 42.308 5.76 6.74 0.00 2.85
3442 3549 5.243283 TCCCTCTGTACGGAAATATAAGAGC 59.757 44.000 5.76 0.00 0.00 4.09
3444 3551 6.295349 CCCTCTGTACGGAAATATAAGAGCAT 60.295 42.308 5.76 0.00 0.00 3.79
3447 3554 9.692749 CTCTGTACGGAAATATAAGAGCATTTA 57.307 33.333 5.76 0.00 0.00 1.40
3448 3555 9.692749 TCTGTACGGAAATATAAGAGCATTTAG 57.307 33.333 0.63 0.00 0.00 1.85
3449 3556 8.827177 TGTACGGAAATATAAGAGCATTTAGG 57.173 34.615 0.00 0.00 0.00 2.69
3450 3557 8.426489 TGTACGGAAATATAAGAGCATTTAGGT 58.574 33.333 0.00 0.00 0.00 3.08
3461 3568 5.803020 GAGCATTTAGGTCACCACTTTAG 57.197 43.478 0.00 0.00 44.14 1.85
3462 3569 5.242795 AGCATTTAGGTCACCACTTTAGT 57.757 39.130 0.00 0.00 0.00 2.24
3463 3570 5.003804 AGCATTTAGGTCACCACTTTAGTG 58.996 41.667 0.00 2.86 45.23 2.74
3495 3602 9.525826 AATGCTCTTATAATTCTTTATGGAGGG 57.474 33.333 0.00 0.00 33.91 4.30
3496 3603 8.275187 TGCTCTTATAATTCTTTATGGAGGGA 57.725 34.615 0.00 0.00 33.91 4.20
3497 3604 8.378565 TGCTCTTATAATTCTTTATGGAGGGAG 58.621 37.037 0.00 0.00 33.91 4.30
3498 3605 8.379331 GCTCTTATAATTCTTTATGGAGGGAGT 58.621 37.037 0.00 0.00 33.91 3.85
3506 3613 9.453830 AATTCTTTATGGAGGGAGTACTTATCT 57.546 33.333 0.00 0.00 0.00 1.98
3508 3615 8.937207 TCTTTATGGAGGGAGTACTTATCTAC 57.063 38.462 0.00 0.00 0.00 2.59
3509 3616 8.734763 TCTTTATGGAGGGAGTACTTATCTACT 58.265 37.037 0.00 0.00 0.00 2.57
3513 3620 8.709272 ATGGAGGGAGTACTTATCTACTAAAC 57.291 38.462 0.00 0.00 0.00 2.01
3514 3621 7.880623 TGGAGGGAGTACTTATCTACTAAACT 58.119 38.462 0.00 0.00 0.00 2.66
3515 3622 8.342270 TGGAGGGAGTACTTATCTACTAAACTT 58.658 37.037 0.00 0.00 0.00 2.66
3516 3623 8.631797 GGAGGGAGTACTTATCTACTAAACTTG 58.368 40.741 0.00 0.00 0.00 3.16
3517 3624 9.187996 GAGGGAGTACTTATCTACTAAACTTGT 57.812 37.037 0.00 0.00 0.00 3.16
3518 3625 8.968969 AGGGAGTACTTATCTACTAAACTTGTG 58.031 37.037 0.00 0.00 0.00 3.33
3519 3626 8.964772 GGGAGTACTTATCTACTAAACTTGTGA 58.035 37.037 0.00 0.00 0.00 3.58
3544 3651 7.674471 AGGAAGTTTTCAATAGTACTTCTGC 57.326 36.000 0.00 0.00 43.65 4.26
3546 3653 7.389053 AGGAAGTTTTCAATAGTACTTCTGCAG 59.611 37.037 7.63 7.63 43.65 4.41
3564 3671 7.601073 TCTGCAGTTACATTTCTACTGAATG 57.399 36.000 14.67 0.00 41.33 2.67
3579 3686 4.451900 ACTGAATGTTTGAGTCCGAGTTT 58.548 39.130 0.00 0.00 0.00 2.66
3631 3738 0.169672 CGAAGCATGACTTTGCCCAG 59.830 55.000 0.00 0.00 43.83 4.45
3639 3746 2.325484 TGACTTTGCCCAGACTGTAGA 58.675 47.619 0.93 0.00 0.00 2.59
3654 3761 7.315890 CAGACTGTAGACACAACTATGATTGA 58.684 38.462 0.00 0.00 33.22 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 6.371548 TGTTAACTATACTAACGGTCACTCGT 59.628 38.462 7.22 0.00 46.08 4.18
10 11 6.775088 TGTTAACTATACTAACGGTCACTCG 58.225 40.000 7.22 0.00 32.87 4.18
11 12 7.192232 CCTGTTAACTATACTAACGGTCACTC 58.808 42.308 7.22 0.00 34.94 3.51
12 13 6.405176 GCCTGTTAACTATACTAACGGTCACT 60.405 42.308 7.22 0.00 34.94 3.41
13 14 5.745769 GCCTGTTAACTATACTAACGGTCAC 59.254 44.000 7.22 0.00 34.94 3.67
14 15 5.163519 GGCCTGTTAACTATACTAACGGTCA 60.164 44.000 7.22 0.00 34.94 4.02
15 16 5.163519 TGGCCTGTTAACTATACTAACGGTC 60.164 44.000 3.32 7.60 34.94 4.79
16 17 4.711355 TGGCCTGTTAACTATACTAACGGT 59.289 41.667 3.32 0.00 34.94 4.83
17 18 5.266733 TGGCCTGTTAACTATACTAACGG 57.733 43.478 3.32 0.00 36.01 4.44
18 19 5.163478 ACCTGGCCTGTTAACTATACTAACG 60.163 44.000 3.32 0.00 32.87 3.18
19 20 6.231258 ACCTGGCCTGTTAACTATACTAAC 57.769 41.667 3.32 0.00 0.00 2.34
20 21 6.214005 ACAACCTGGCCTGTTAACTATACTAA 59.786 38.462 3.32 0.00 0.00 2.24
21 22 5.722923 ACAACCTGGCCTGTTAACTATACTA 59.277 40.000 3.32 0.00 0.00 1.82
22 23 4.534897 ACAACCTGGCCTGTTAACTATACT 59.465 41.667 3.32 0.00 0.00 2.12
23 24 4.840271 ACAACCTGGCCTGTTAACTATAC 58.160 43.478 3.32 0.00 0.00 1.47
24 25 5.722923 ACTACAACCTGGCCTGTTAACTATA 59.277 40.000 3.32 0.00 0.00 1.31
25 26 4.534897 ACTACAACCTGGCCTGTTAACTAT 59.465 41.667 3.32 0.00 0.00 2.12
26 27 3.905591 ACTACAACCTGGCCTGTTAACTA 59.094 43.478 3.32 0.00 0.00 2.24
27 28 2.709397 ACTACAACCTGGCCTGTTAACT 59.291 45.455 3.32 0.00 0.00 2.24
28 29 3.072211 GACTACAACCTGGCCTGTTAAC 58.928 50.000 3.32 0.00 0.00 2.01
29 30 2.976882 AGACTACAACCTGGCCTGTTAA 59.023 45.455 3.32 0.00 0.00 2.01
30 31 2.616524 AGACTACAACCTGGCCTGTTA 58.383 47.619 3.32 0.00 0.00 2.41
31 32 1.435256 AGACTACAACCTGGCCTGTT 58.565 50.000 3.32 4.66 0.00 3.16
32 33 1.435256 AAGACTACAACCTGGCCTGT 58.565 50.000 3.32 1.71 0.00 4.00
33 34 2.154462 CAAAGACTACAACCTGGCCTG 58.846 52.381 3.32 2.54 0.00 4.85
34 35 2.039084 CTCAAAGACTACAACCTGGCCT 59.961 50.000 3.32 0.00 0.00 5.19
35 36 2.427506 CTCAAAGACTACAACCTGGCC 58.572 52.381 0.00 0.00 0.00 5.36
36 37 1.807142 GCTCAAAGACTACAACCTGGC 59.193 52.381 0.00 0.00 0.00 4.85
37 38 2.224523 TGGCTCAAAGACTACAACCTGG 60.225 50.000 0.00 0.00 0.00 4.45
38 39 3.126001 TGGCTCAAAGACTACAACCTG 57.874 47.619 0.00 0.00 0.00 4.00
39 40 3.477530 GTTGGCTCAAAGACTACAACCT 58.522 45.455 0.00 0.00 33.90 3.50
40 41 2.223377 CGTTGGCTCAAAGACTACAACC 59.777 50.000 0.00 0.00 35.93 3.77
41 42 2.349532 GCGTTGGCTCAAAGACTACAAC 60.350 50.000 5.35 0.00 35.96 3.32
42 43 1.871039 GCGTTGGCTCAAAGACTACAA 59.129 47.619 5.35 0.00 27.79 2.41
43 44 1.508632 GCGTTGGCTCAAAGACTACA 58.491 50.000 5.35 0.00 27.79 2.74
44 45 0.438830 CGCGTTGGCTCAAAGACTAC 59.561 55.000 0.00 0.00 36.88 2.73
45 46 0.669318 CCGCGTTGGCTCAAAGACTA 60.669 55.000 4.92 0.00 36.88 2.59
46 47 1.961277 CCGCGTTGGCTCAAAGACT 60.961 57.895 4.92 0.00 36.88 3.24
47 48 2.251642 ACCGCGTTGGCTCAAAGAC 61.252 57.895 4.92 0.00 43.94 3.01
48 49 2.110213 ACCGCGTTGGCTCAAAGA 59.890 55.556 4.92 0.00 43.94 2.52
49 50 2.252260 CACCGCGTTGGCTCAAAG 59.748 61.111 4.92 0.00 43.94 2.77
50 51 3.283684 CCACCGCGTTGGCTCAAA 61.284 61.111 10.63 0.00 43.94 2.69
57 58 3.656045 GACCAACCCACCGCGTTG 61.656 66.667 4.92 0.00 40.25 4.10
61 62 3.351416 GAACGACCAACCCACCGC 61.351 66.667 0.00 0.00 0.00 5.68
62 63 3.039588 CGAACGACCAACCCACCG 61.040 66.667 0.00 0.00 0.00 4.94
63 64 3.351416 GCGAACGACCAACCCACC 61.351 66.667 0.00 0.00 0.00 4.61
64 65 1.890510 AAGCGAACGACCAACCCAC 60.891 57.895 0.00 0.00 0.00 4.61
65 66 1.890041 CAAGCGAACGACCAACCCA 60.890 57.895 0.00 0.00 0.00 4.51
66 67 2.613506 CCAAGCGAACGACCAACCC 61.614 63.158 0.00 0.00 0.00 4.11
67 68 2.613506 CCCAAGCGAACGACCAACC 61.614 63.158 0.00 0.00 0.00 3.77
68 69 2.943653 CCCAAGCGAACGACCAAC 59.056 61.111 0.00 0.00 0.00 3.77
69 70 2.975799 GCCCAAGCGAACGACCAA 60.976 61.111 0.00 0.00 0.00 3.67
98 99 3.473647 TCAGCGGCCTGAGATGGG 61.474 66.667 0.00 0.00 42.98 4.00
105 106 1.600957 CTATTGTTGATCAGCGGCCTG 59.399 52.381 0.00 0.00 40.54 4.85
106 107 1.959042 CTATTGTTGATCAGCGGCCT 58.041 50.000 0.00 0.00 0.00 5.19
107 108 0.308993 GCTATTGTTGATCAGCGGCC 59.691 55.000 5.02 0.00 0.00 6.13
108 109 1.262683 GAGCTATTGTTGATCAGCGGC 59.737 52.381 5.02 6.76 39.04 6.53
109 110 1.524355 CGAGCTATTGTTGATCAGCGG 59.476 52.381 5.02 0.00 39.04 5.52
110 111 2.196749 ACGAGCTATTGTTGATCAGCG 58.803 47.619 5.02 0.00 39.04 5.18
111 112 2.541762 GGACGAGCTATTGTTGATCAGC 59.458 50.000 2.05 2.05 0.00 4.26
112 113 3.126831 GGGACGAGCTATTGTTGATCAG 58.873 50.000 0.00 0.00 0.00 2.90
113 114 3.179443 GGGACGAGCTATTGTTGATCA 57.821 47.619 0.00 0.00 0.00 2.92
128 129 2.432628 GCTGGTTCAGTCGGGACG 60.433 66.667 0.00 0.00 42.58 4.79
129 130 2.432628 CGCTGGTTCAGTCGGGAC 60.433 66.667 0.00 0.00 33.43 4.46
130 131 3.691342 CCGCTGGTTCAGTCGGGA 61.691 66.667 16.89 0.00 42.64 5.14
131 132 3.530910 AACCGCTGGTTCAGTCGGG 62.531 63.158 23.46 13.86 43.05 5.14
132 133 2.030562 AACCGCTGGTTCAGTCGG 59.969 61.111 20.46 20.46 43.05 4.79
140 141 2.526873 AGGGACTGAACCGCTGGT 60.527 61.111 0.00 0.00 37.18 4.00
151 152 4.021925 GTCGCCAAGGCAGGGACT 62.022 66.667 12.19 0.00 42.25 3.85
155 156 3.726517 CAACGTCGCCAAGGCAGG 61.727 66.667 12.19 6.77 42.06 4.85
156 157 2.664851 TCAACGTCGCCAAGGCAG 60.665 61.111 12.19 4.35 42.06 4.85
157 158 2.970324 GTCAACGTCGCCAAGGCA 60.970 61.111 12.19 0.00 42.06 4.75
158 159 2.970324 TGTCAACGTCGCCAAGGC 60.970 61.111 0.00 0.00 37.85 4.35
159 160 1.157870 AAGTGTCAACGTCGCCAAGG 61.158 55.000 0.00 0.00 0.00 3.61
160 161 0.232303 GAAGTGTCAACGTCGCCAAG 59.768 55.000 0.00 0.00 0.00 3.61
161 162 2.303452 GAAGTGTCAACGTCGCCAA 58.697 52.632 0.00 0.00 0.00 4.52
162 163 4.021650 GAAGTGTCAACGTCGCCA 57.978 55.556 0.00 0.00 0.00 5.69
175 176 5.182760 AGTCGGAGAAAGTTATACACGAAGT 59.817 40.000 0.00 0.00 40.52 3.01
176 177 5.638783 AGTCGGAGAAAGTTATACACGAAG 58.361 41.667 0.00 0.00 39.69 3.79
177 178 5.633830 AGTCGGAGAAAGTTATACACGAA 57.366 39.130 0.00 0.00 39.69 3.85
178 179 4.201753 CGAGTCGGAGAAAGTTATACACGA 60.202 45.833 4.10 0.00 39.69 4.35
179 180 4.027065 CGAGTCGGAGAAAGTTATACACG 58.973 47.826 4.10 0.00 39.69 4.49
180 181 3.790288 GCGAGTCGGAGAAAGTTATACAC 59.210 47.826 15.52 0.00 39.69 2.90
181 182 3.693085 AGCGAGTCGGAGAAAGTTATACA 59.307 43.478 15.52 0.00 39.69 2.29
182 183 4.290104 AGCGAGTCGGAGAAAGTTATAC 57.710 45.455 15.52 0.00 39.69 1.47
183 184 4.669318 CAAGCGAGTCGGAGAAAGTTATA 58.331 43.478 15.52 0.00 39.69 0.98
184 185 3.512680 CAAGCGAGTCGGAGAAAGTTAT 58.487 45.455 15.52 0.00 39.69 1.89
185 186 2.925306 GCAAGCGAGTCGGAGAAAGTTA 60.925 50.000 15.52 0.00 39.69 2.24
186 187 1.784525 CAAGCGAGTCGGAGAAAGTT 58.215 50.000 15.52 0.00 39.69 2.66
187 188 0.667792 GCAAGCGAGTCGGAGAAAGT 60.668 55.000 15.52 0.00 39.69 2.66
188 189 1.355066 GGCAAGCGAGTCGGAGAAAG 61.355 60.000 15.52 0.00 39.69 2.62
189 190 1.374252 GGCAAGCGAGTCGGAGAAA 60.374 57.895 15.52 0.00 39.69 2.52
190 191 2.261671 GGCAAGCGAGTCGGAGAA 59.738 61.111 15.52 0.00 39.69 2.87
191 192 4.116328 CGGCAAGCGAGTCGGAGA 62.116 66.667 15.52 0.00 0.00 3.71
195 196 4.735132 TTCCCGGCAAGCGAGTCG 62.735 66.667 8.54 8.54 0.00 4.18
196 197 2.815647 CTTCCCGGCAAGCGAGTC 60.816 66.667 0.00 0.00 0.00 3.36
202 203 3.058160 CCAGTGCTTCCCGGCAAG 61.058 66.667 0.00 0.00 44.18 4.01
211 212 4.892965 TTGCGGGTGCCAGTGCTT 62.893 61.111 0.00 0.00 41.78 3.91
212 213 4.892965 TTTGCGGGTGCCAGTGCT 62.893 61.111 0.00 0.00 41.78 4.40
213 214 3.683937 ATTTGCGGGTGCCAGTGC 61.684 61.111 0.00 0.00 41.78 4.40
214 215 1.597797 ATCATTTGCGGGTGCCAGTG 61.598 55.000 0.00 0.00 41.78 3.66
215 216 1.304381 ATCATTTGCGGGTGCCAGT 60.304 52.632 0.00 0.00 41.78 4.00
216 217 1.033746 AGATCATTTGCGGGTGCCAG 61.034 55.000 0.00 0.00 41.78 4.85
217 218 0.254462 TAGATCATTTGCGGGTGCCA 59.746 50.000 0.00 0.00 41.78 4.92
218 219 0.663153 GTAGATCATTTGCGGGTGCC 59.337 55.000 0.00 0.00 41.78 5.01
219 220 1.331756 CTGTAGATCATTTGCGGGTGC 59.668 52.381 0.00 0.00 43.20 5.01
220 221 2.905075 TCTGTAGATCATTTGCGGGTG 58.095 47.619 0.00 0.00 0.00 4.61
221 222 3.845781 ATCTGTAGATCATTTGCGGGT 57.154 42.857 0.00 0.00 0.00 5.28
249 250 9.283768 TGTCATACAGTTTGAATACACAAGAAT 57.716 29.630 0.00 0.00 0.00 2.40
250 251 8.669946 TGTCATACAGTTTGAATACACAAGAA 57.330 30.769 0.00 0.00 0.00 2.52
251 252 8.310406 CTGTCATACAGTTTGAATACACAAGA 57.690 34.615 0.00 0.00 41.19 3.02
267 268 3.575256 ACGTCCTTAACCACTGTCATACA 59.425 43.478 0.00 0.00 0.00 2.29
268 269 3.924686 CACGTCCTTAACCACTGTCATAC 59.075 47.826 0.00 0.00 0.00 2.39
269 270 3.827876 TCACGTCCTTAACCACTGTCATA 59.172 43.478 0.00 0.00 0.00 2.15
270 271 2.631062 TCACGTCCTTAACCACTGTCAT 59.369 45.455 0.00 0.00 0.00 3.06
271 272 2.033372 TCACGTCCTTAACCACTGTCA 58.967 47.619 0.00 0.00 0.00 3.58
272 273 2.806608 TCACGTCCTTAACCACTGTC 57.193 50.000 0.00 0.00 0.00 3.51
273 274 2.696707 TCTTCACGTCCTTAACCACTGT 59.303 45.455 0.00 0.00 0.00 3.55
274 275 3.380479 TCTTCACGTCCTTAACCACTG 57.620 47.619 0.00 0.00 0.00 3.66
275 276 3.640029 TCTTCTTCACGTCCTTAACCACT 59.360 43.478 0.00 0.00 0.00 4.00
276 277 3.986277 TCTTCTTCACGTCCTTAACCAC 58.014 45.455 0.00 0.00 0.00 4.16
277 278 4.675976 TTCTTCTTCACGTCCTTAACCA 57.324 40.909 0.00 0.00 0.00 3.67
278 279 6.555812 AATTTCTTCTTCACGTCCTTAACC 57.444 37.500 0.00 0.00 0.00 2.85
279 280 8.126700 TCAAAATTTCTTCTTCACGTCCTTAAC 58.873 33.333 0.00 0.00 0.00 2.01
280 281 8.215926 TCAAAATTTCTTCTTCACGTCCTTAA 57.784 30.769 0.00 0.00 0.00 1.85
281 282 7.041372 CCTCAAAATTTCTTCTTCACGTCCTTA 60.041 37.037 0.00 0.00 0.00 2.69
282 283 6.238759 CCTCAAAATTTCTTCTTCACGTCCTT 60.239 38.462 0.00 0.00 0.00 3.36
283 284 5.239525 CCTCAAAATTTCTTCTTCACGTCCT 59.760 40.000 0.00 0.00 0.00 3.85
284 285 5.452777 CCTCAAAATTTCTTCTTCACGTCC 58.547 41.667 0.00 0.00 0.00 4.79
285 286 4.912187 GCCTCAAAATTTCTTCTTCACGTC 59.088 41.667 0.00 0.00 0.00 4.34
286 287 4.580580 AGCCTCAAAATTTCTTCTTCACGT 59.419 37.500 0.00 0.00 0.00 4.49
287 288 4.913924 CAGCCTCAAAATTTCTTCTTCACG 59.086 41.667 0.00 0.00 0.00 4.35
288 289 6.076981 TCAGCCTCAAAATTTCTTCTTCAC 57.923 37.500 0.00 0.00 0.00 3.18
289 290 6.906157 ATCAGCCTCAAAATTTCTTCTTCA 57.094 33.333 0.00 0.00 0.00 3.02
290 291 7.919621 CCATATCAGCCTCAAAATTTCTTCTTC 59.080 37.037 0.00 0.00 0.00 2.87
291 292 7.398332 ACCATATCAGCCTCAAAATTTCTTCTT 59.602 33.333 0.00 0.00 0.00 2.52
292 293 6.894103 ACCATATCAGCCTCAAAATTTCTTCT 59.106 34.615 0.00 0.00 0.00 2.85
293 294 6.976925 CACCATATCAGCCTCAAAATTTCTTC 59.023 38.462 0.00 0.00 0.00 2.87
294 295 6.628844 GCACCATATCAGCCTCAAAATTTCTT 60.629 38.462 0.00 0.00 0.00 2.52
295 296 5.163478 GCACCATATCAGCCTCAAAATTTCT 60.163 40.000 0.00 0.00 0.00 2.52
296 297 5.045872 GCACCATATCAGCCTCAAAATTTC 58.954 41.667 0.00 0.00 0.00 2.17
297 298 4.141869 GGCACCATATCAGCCTCAAAATTT 60.142 41.667 0.00 0.00 44.92 1.82
298 299 3.385755 GGCACCATATCAGCCTCAAAATT 59.614 43.478 0.00 0.00 44.92 1.82
299 300 2.961062 GGCACCATATCAGCCTCAAAAT 59.039 45.455 0.00 0.00 44.92 1.82
300 301 2.378038 GGCACCATATCAGCCTCAAAA 58.622 47.619 0.00 0.00 44.92 2.44
301 302 2.057137 GGCACCATATCAGCCTCAAA 57.943 50.000 0.00 0.00 44.92 2.69
302 303 3.806941 GGCACCATATCAGCCTCAA 57.193 52.632 0.00 0.00 44.92 3.02
307 308 2.786777 TGATGATGGCACCATATCAGC 58.213 47.619 1.19 1.85 39.47 4.26
308 309 5.067954 TCTTTGATGATGGCACCATATCAG 58.932 41.667 1.19 0.00 36.81 2.90
309 310 5.051409 TCTTTGATGATGGCACCATATCA 57.949 39.130 1.19 9.30 36.70 2.15
310 311 6.395426 TTTCTTTGATGATGGCACCATATC 57.605 37.500 1.19 7.06 36.70 1.63
311 312 6.795144 TTTTCTTTGATGATGGCACCATAT 57.205 33.333 1.19 0.00 36.70 1.78
312 313 6.795144 ATTTTCTTTGATGATGGCACCATA 57.205 33.333 1.19 0.00 36.70 2.74
313 314 5.687166 ATTTTCTTTGATGATGGCACCAT 57.313 34.783 0.66 0.66 39.69 3.55
314 315 5.486735 AATTTTCTTTGATGATGGCACCA 57.513 34.783 0.00 0.00 0.00 4.17
315 316 7.466320 GCATTAATTTTCTTTGATGATGGCACC 60.466 37.037 0.00 0.00 0.00 5.01
316 317 7.064847 TGCATTAATTTTCTTTGATGATGGCAC 59.935 33.333 0.00 0.00 0.00 5.01
317 318 7.104290 TGCATTAATTTTCTTTGATGATGGCA 58.896 30.769 0.00 0.00 0.00 4.92
318 319 7.542534 TGCATTAATTTTCTTTGATGATGGC 57.457 32.000 0.00 0.00 0.00 4.40
319 320 9.373603 TCTTGCATTAATTTTCTTTGATGATGG 57.626 29.630 0.00 0.00 0.00 3.51
328 329 9.649167 CTCCTTTGATCTTGCATTAATTTTCTT 57.351 29.630 0.00 0.00 0.00 2.52
329 330 8.810041 ACTCCTTTGATCTTGCATTAATTTTCT 58.190 29.630 0.00 0.00 0.00 2.52
330 331 8.992835 ACTCCTTTGATCTTGCATTAATTTTC 57.007 30.769 0.00 0.00 0.00 2.29
331 332 9.428097 GAACTCCTTTGATCTTGCATTAATTTT 57.572 29.630 0.00 0.00 0.00 1.82
332 333 7.756722 CGAACTCCTTTGATCTTGCATTAATTT 59.243 33.333 0.00 0.00 0.00 1.82
333 334 7.121168 TCGAACTCCTTTGATCTTGCATTAATT 59.879 33.333 0.00 0.00 0.00 1.40
334 335 6.599244 TCGAACTCCTTTGATCTTGCATTAAT 59.401 34.615 0.00 0.00 0.00 1.40
335 336 5.937540 TCGAACTCCTTTGATCTTGCATTAA 59.062 36.000 0.00 0.00 0.00 1.40
336 337 5.487433 TCGAACTCCTTTGATCTTGCATTA 58.513 37.500 0.00 0.00 0.00 1.90
337 338 4.326826 TCGAACTCCTTTGATCTTGCATT 58.673 39.130 0.00 0.00 0.00 3.56
338 339 3.942829 TCGAACTCCTTTGATCTTGCAT 58.057 40.909 0.00 0.00 0.00 3.96
339 340 3.401033 TCGAACTCCTTTGATCTTGCA 57.599 42.857 0.00 0.00 0.00 4.08
340 341 4.716943 CTTTCGAACTCCTTTGATCTTGC 58.283 43.478 0.00 0.00 0.00 4.01
341 342 4.453819 AGCTTTCGAACTCCTTTGATCTTG 59.546 41.667 0.00 0.00 0.00 3.02
342 343 4.453819 CAGCTTTCGAACTCCTTTGATCTT 59.546 41.667 0.00 0.00 0.00 2.40
343 344 3.999663 CAGCTTTCGAACTCCTTTGATCT 59.000 43.478 0.00 0.00 0.00 2.75
344 345 3.425492 GCAGCTTTCGAACTCCTTTGATC 60.425 47.826 0.00 0.00 0.00 2.92
345 346 2.485814 GCAGCTTTCGAACTCCTTTGAT 59.514 45.455 0.00 0.00 0.00 2.57
346 347 1.873591 GCAGCTTTCGAACTCCTTTGA 59.126 47.619 0.00 0.00 0.00 2.69
347 348 1.603802 TGCAGCTTTCGAACTCCTTTG 59.396 47.619 0.00 0.00 0.00 2.77
348 349 1.967319 TGCAGCTTTCGAACTCCTTT 58.033 45.000 0.00 0.00 0.00 3.11
349 350 1.967319 TTGCAGCTTTCGAACTCCTT 58.033 45.000 0.00 0.00 0.00 3.36
350 351 1.967319 TTTGCAGCTTTCGAACTCCT 58.033 45.000 0.00 0.00 0.00 3.69
351 352 2.997485 ATTTGCAGCTTTCGAACTCC 57.003 45.000 0.00 0.00 0.00 3.85
352 353 3.888934 TGAATTTGCAGCTTTCGAACTC 58.111 40.909 0.00 0.00 0.00 3.01
353 354 3.988379 TGAATTTGCAGCTTTCGAACT 57.012 38.095 0.00 0.00 0.00 3.01
354 355 4.681025 TGAATGAATTTGCAGCTTTCGAAC 59.319 37.500 0.00 0.00 0.00 3.95
355 356 4.869215 TGAATGAATTTGCAGCTTTCGAA 58.131 34.783 0.00 0.00 0.00 3.71
356 357 4.502171 TGAATGAATTTGCAGCTTTCGA 57.498 36.364 0.00 0.00 0.00 3.71
357 358 4.860352 TCATGAATGAATTTGCAGCTTTCG 59.140 37.500 0.00 0.00 33.08 3.46
358 359 6.097356 TCTCATGAATGAATTTGCAGCTTTC 58.903 36.000 0.00 0.00 36.18 2.62
359 360 6.032956 TCTCATGAATGAATTTGCAGCTTT 57.967 33.333 0.00 0.00 36.18 3.51
360 361 5.185249 ACTCTCATGAATGAATTTGCAGCTT 59.815 36.000 0.00 0.00 36.18 3.74
361 362 4.705507 ACTCTCATGAATGAATTTGCAGCT 59.294 37.500 0.00 0.00 36.18 4.24
362 363 4.995124 ACTCTCATGAATGAATTTGCAGC 58.005 39.130 0.00 0.00 36.18 5.25
363 364 7.317842 ACTACTCTCATGAATGAATTTGCAG 57.682 36.000 0.00 0.00 36.18 4.41
364 365 8.260114 TCTACTACTCTCATGAATGAATTTGCA 58.740 33.333 0.00 0.00 36.18 4.08
365 366 8.654230 TCTACTACTCTCATGAATGAATTTGC 57.346 34.615 0.00 0.00 36.18 3.68
430 431 7.868906 AACATGTCTACCTAAGTCTAGAGAC 57.131 40.000 0.00 1.17 45.08 3.36
431 432 8.107729 TCAAACATGTCTACCTAAGTCTAGAGA 58.892 37.037 0.00 0.00 0.00 3.10
432 433 8.282455 TCAAACATGTCTACCTAAGTCTAGAG 57.718 38.462 0.00 0.00 0.00 2.43
433 434 8.824756 ATCAAACATGTCTACCTAAGTCTAGA 57.175 34.615 0.00 0.00 0.00 2.43
434 435 9.307121 CAATCAAACATGTCTACCTAAGTCTAG 57.693 37.037 0.00 0.00 0.00 2.43
435 436 9.031537 TCAATCAAACATGTCTACCTAAGTCTA 57.968 33.333 0.00 0.00 0.00 2.59
436 437 7.907389 TCAATCAAACATGTCTACCTAAGTCT 58.093 34.615 0.00 0.00 0.00 3.24
437 438 8.723942 ATCAATCAAACATGTCTACCTAAGTC 57.276 34.615 0.00 0.00 0.00 3.01
438 439 9.167311 GAATCAATCAAACATGTCTACCTAAGT 57.833 33.333 0.00 0.00 0.00 2.24
439 440 9.166173 TGAATCAATCAAACATGTCTACCTAAG 57.834 33.333 0.00 0.00 34.30 2.18
440 441 9.685276 ATGAATCAATCAAACATGTCTACCTAA 57.315 29.630 0.00 0.00 42.54 2.69
441 442 9.330063 GATGAATCAATCAAACATGTCTACCTA 57.670 33.333 0.00 0.00 42.54 3.08
442 443 8.051535 AGATGAATCAATCAAACATGTCTACCT 58.948 33.333 0.00 0.00 42.54 3.08
443 444 8.127327 CAGATGAATCAATCAAACATGTCTACC 58.873 37.037 0.00 0.00 42.54 3.18
444 445 7.642978 GCAGATGAATCAATCAAACATGTCTAC 59.357 37.037 0.00 0.00 42.54 2.59
445 446 7.337436 TGCAGATGAATCAATCAAACATGTCTA 59.663 33.333 0.00 0.00 42.54 2.59
446 447 6.152154 TGCAGATGAATCAATCAAACATGTCT 59.848 34.615 0.00 0.00 42.54 3.41
447 448 6.327154 TGCAGATGAATCAATCAAACATGTC 58.673 36.000 0.00 0.00 42.54 3.06
448 449 6.275494 TGCAGATGAATCAATCAAACATGT 57.725 33.333 0.00 0.00 42.54 3.21
449 450 6.978080 TCATGCAGATGAATCAATCAAACATG 59.022 34.615 0.00 0.00 42.54 3.21
450 451 7.107639 TCATGCAGATGAATCAATCAAACAT 57.892 32.000 0.00 0.00 42.54 2.71
451 452 6.518208 TCATGCAGATGAATCAATCAAACA 57.482 33.333 0.00 0.00 42.54 2.83
452 453 9.692749 AATATCATGCAGATGAATCAATCAAAC 57.307 29.630 8.40 0.00 42.02 2.93
453 454 9.691362 CAATATCATGCAGATGAATCAATCAAA 57.309 29.630 8.40 0.00 42.02 2.69
454 455 8.856103 ACAATATCATGCAGATGAATCAATCAA 58.144 29.630 8.40 0.00 42.02 2.57
455 456 8.404107 ACAATATCATGCAGATGAATCAATCA 57.596 30.769 8.40 0.00 42.02 2.57
459 460 9.509956 TCATTACAATATCATGCAGATGAATCA 57.490 29.630 8.40 0.00 42.02 2.57
462 463 8.953313 GGATCATTACAATATCATGCAGATGAA 58.047 33.333 8.40 0.00 42.02 2.57
463 464 7.555195 GGGATCATTACAATATCATGCAGATGA 59.445 37.037 8.40 1.06 42.92 2.92
464 465 7.556635 AGGGATCATTACAATATCATGCAGATG 59.443 37.037 8.40 0.00 37.57 2.90
465 466 7.640313 AGGGATCATTACAATATCATGCAGAT 58.360 34.615 0.00 0.00 40.86 2.90
466 467 7.024345 AGGGATCATTACAATATCATGCAGA 57.976 36.000 0.00 0.00 0.00 4.26
467 468 7.698506 AAGGGATCATTACAATATCATGCAG 57.301 36.000 0.00 0.00 0.00 4.41
468 469 7.724951 TCAAAGGGATCATTACAATATCATGCA 59.275 33.333 0.00 0.00 0.00 3.96
469 470 8.114331 TCAAAGGGATCATTACAATATCATGC 57.886 34.615 0.00 0.00 0.00 4.06
470 471 9.903682 GTTCAAAGGGATCATTACAATATCATG 57.096 33.333 0.00 0.00 0.00 3.07
471 472 9.872684 AGTTCAAAGGGATCATTACAATATCAT 57.127 29.630 0.00 0.00 0.00 2.45
472 473 9.699410 AAGTTCAAAGGGATCATTACAATATCA 57.301 29.630 0.00 0.00 0.00 2.15
478 479 9.527157 TCAAATAAGTTCAAAGGGATCATTACA 57.473 29.630 0.00 0.00 0.00 2.41
548 549 3.937814 ACTTGAATGCACGGTATCTTCA 58.062 40.909 0.00 0.00 0.00 3.02
560 561 3.187022 GTGCCCAATGAAAACTTGAATGC 59.813 43.478 0.00 0.00 0.00 3.56
630 631 2.427812 TCCCGTGCGAAATCTATACACA 59.572 45.455 0.00 0.00 0.00 3.72
631 632 3.088194 TCCCGTGCGAAATCTATACAC 57.912 47.619 0.00 0.00 0.00 2.90
632 633 3.804786 TTCCCGTGCGAAATCTATACA 57.195 42.857 0.00 0.00 0.00 2.29
638 639 2.699251 AAAGTTTCCCGTGCGAAATC 57.301 45.000 0.00 0.00 34.41 2.17
687 688 3.914426 AACCAAGACCGCTCAATATCT 57.086 42.857 0.00 0.00 0.00 1.98
691 692 2.270352 TCAAACCAAGACCGCTCAAT 57.730 45.000 0.00 0.00 0.00 2.57
692 693 2.045561 TTCAAACCAAGACCGCTCAA 57.954 45.000 0.00 0.00 0.00 3.02
693 694 2.045561 TTTCAAACCAAGACCGCTCA 57.954 45.000 0.00 0.00 0.00 4.26
694 695 2.351738 CCATTTCAAACCAAGACCGCTC 60.352 50.000 0.00 0.00 0.00 5.03
695 696 1.613437 CCATTTCAAACCAAGACCGCT 59.387 47.619 0.00 0.00 0.00 5.52
696 697 1.339929 ACCATTTCAAACCAAGACCGC 59.660 47.619 0.00 0.00 0.00 5.68
697 698 3.726291 AACCATTTCAAACCAAGACCG 57.274 42.857 0.00 0.00 0.00 4.79
698 699 8.445275 AAATTAAACCATTTCAAACCAAGACC 57.555 30.769 0.00 0.00 0.00 3.85
746 747 8.729756 GCAATTAAACCATTTCAAATAGCCTTT 58.270 29.630 0.00 0.00 0.00 3.11
747 748 7.336679 GGCAATTAAACCATTTCAAATAGCCTT 59.663 33.333 0.00 0.00 32.49 4.35
748 749 6.823182 GGCAATTAAACCATTTCAAATAGCCT 59.177 34.615 0.00 0.00 32.49 4.58
749 750 6.823182 AGGCAATTAAACCATTTCAAATAGCC 59.177 34.615 0.00 0.00 35.26 3.93
750 751 7.677041 GCAGGCAATTAAACCATTTCAAATAGC 60.677 37.037 0.00 0.00 0.00 2.97
751 752 7.333921 TGCAGGCAATTAAACCATTTCAAATAG 59.666 33.333 0.00 0.00 0.00 1.73
752 753 7.164122 TGCAGGCAATTAAACCATTTCAAATA 58.836 30.769 0.00 0.00 0.00 1.40
753 754 6.002704 TGCAGGCAATTAAACCATTTCAAAT 58.997 32.000 0.00 0.00 0.00 2.32
754 755 5.371526 TGCAGGCAATTAAACCATTTCAAA 58.628 33.333 0.00 0.00 0.00 2.69
755 756 4.965814 TGCAGGCAATTAAACCATTTCAA 58.034 34.783 0.00 0.00 0.00 2.69
756 757 4.613925 TGCAGGCAATTAAACCATTTCA 57.386 36.364 0.00 0.00 0.00 2.69
757 758 7.790823 ATTATGCAGGCAATTAAACCATTTC 57.209 32.000 0.00 0.00 0.00 2.17
758 759 8.460428 CAAATTATGCAGGCAATTAAACCATTT 58.540 29.630 0.00 0.00 0.00 2.32
759 760 7.067251 CCAAATTATGCAGGCAATTAAACCATT 59.933 33.333 0.00 0.00 0.00 3.16
760 761 6.543100 CCAAATTATGCAGGCAATTAAACCAT 59.457 34.615 0.00 0.00 0.00 3.55
761 762 5.879223 CCAAATTATGCAGGCAATTAAACCA 59.121 36.000 0.00 0.00 0.00 3.67
762 763 5.296531 CCCAAATTATGCAGGCAATTAAACC 59.703 40.000 0.00 0.00 0.00 3.27
763 764 5.220835 GCCCAAATTATGCAGGCAATTAAAC 60.221 40.000 6.04 0.00 43.32 2.01
764 765 4.880696 GCCCAAATTATGCAGGCAATTAAA 59.119 37.500 6.04 0.00 43.32 1.52
765 766 4.450053 GCCCAAATTATGCAGGCAATTAA 58.550 39.130 6.04 0.00 43.32 1.40
766 767 4.070630 GCCCAAATTATGCAGGCAATTA 57.929 40.909 6.04 0.00 43.32 1.40
775 776 2.282407 CAAAGGCTGCCCAAATTATGC 58.718 47.619 16.57 0.00 0.00 3.14
807 808 5.181245 GTGGACATAACTTTAGCAAGCTCAA 59.819 40.000 0.00 0.00 32.57 3.02
808 809 4.695455 GTGGACATAACTTTAGCAAGCTCA 59.305 41.667 0.00 0.00 32.57 4.26
810 811 4.651778 TGTGGACATAACTTTAGCAAGCT 58.348 39.130 0.00 0.00 32.57 3.74
811 812 5.371115 TTGTGGACATAACTTTAGCAAGC 57.629 39.130 0.00 0.00 32.57 4.01
812 813 7.648142 TCTTTTGTGGACATAACTTTAGCAAG 58.352 34.615 0.00 0.00 35.92 4.01
822 918 6.587206 TTCATGCATCTTTTGTGGACATAA 57.413 33.333 0.00 0.00 0.00 1.90
825 921 4.933505 TTTCATGCATCTTTTGTGGACA 57.066 36.364 0.00 0.00 0.00 4.02
826 922 6.347888 CCATTTTTCATGCATCTTTTGTGGAC 60.348 38.462 0.00 0.00 0.00 4.02
830 926 6.072893 GCTTCCATTTTTCATGCATCTTTTGT 60.073 34.615 0.00 0.00 0.00 2.83
859 955 5.463724 CAGGCCTCATTTTCTCTAACGTATC 59.536 44.000 0.00 0.00 0.00 2.24
860 956 5.360591 CAGGCCTCATTTTCTCTAACGTAT 58.639 41.667 0.00 0.00 0.00 3.06
869 965 1.542492 CTGTGCAGGCCTCATTTTCT 58.458 50.000 0.00 0.00 0.00 2.52
1103 1200 2.975799 GGTTGAGGCGCGGTTTGA 60.976 61.111 8.83 0.00 0.00 2.69
1527 1630 2.016704 CATATCGTCGAGCACCGCC 61.017 63.158 0.00 0.00 38.37 6.13
1677 1780 1.336517 ACCACGACGTTGTAGGTGATG 60.337 52.381 21.86 5.15 32.23 3.07
1713 1816 1.152652 ATCATCGACTCGCCCCTCT 60.153 57.895 0.00 0.00 0.00 3.69
1757 1860 1.048160 TGGCTCGCATCCATAGGACA 61.048 55.000 0.00 0.00 32.98 4.02
1762 1865 1.378531 GTGTTTGGCTCGCATCCATA 58.621 50.000 0.00 0.00 32.92 2.74
1764 1867 2.324330 CGTGTTTGGCTCGCATCCA 61.324 57.895 0.00 0.00 0.00 3.41
1776 1879 2.319136 TGTTGTAGCTGACCGTGTTT 57.681 45.000 0.00 0.00 0.00 2.83
1782 1885 2.154462 AGCACAATGTTGTAGCTGACC 58.846 47.619 16.42 0.00 40.97 4.02
1801 1904 2.674380 GGTGCACAGGCCCTTCAG 60.674 66.667 20.43 0.00 40.13 3.02
1914 2017 0.745845 CCAATCCTCTCCGGCACAAG 60.746 60.000 0.00 0.00 0.00 3.16
2019 2122 4.525487 TCCATCTTCTTTTGCTTGCAGAAT 59.475 37.500 0.00 0.00 0.00 2.40
2079 2182 1.600107 GATGTCGGGGTAACAGCCA 59.400 57.895 0.00 0.00 37.54 4.75
2136 2239 3.508840 GCGGCATCAACTTCCCCG 61.509 66.667 0.00 0.00 41.72 5.73
2142 2245 1.580845 GCTCAACAGCGGCATCAACT 61.581 55.000 1.45 0.00 35.39 3.16
2175 2278 1.527433 GGGTGCAGCCTTTGTCCTTC 61.527 60.000 27.63 0.00 37.43 3.46
2265 2368 3.264193 TGGTAACCATCTCATTCAGCAGT 59.736 43.478 0.00 0.00 0.00 4.40
2283 2386 1.377229 CGGTTGGAGCCCTTTGGTA 59.623 57.895 0.00 0.00 0.00 3.25
2298 2401 3.949754 TCGAGTAAGTGATTATGTCCGGT 59.050 43.478 0.00 0.00 0.00 5.28
2442 2545 1.199624 GTGTTTCACGCCTTTTGCAG 58.800 50.000 0.00 0.00 41.33 4.41
2607 2710 5.881923 TTACCAAAGTCTTACTCACCACT 57.118 39.130 0.00 0.00 0.00 4.00
2643 2746 2.420022 CCTTCAAGCATCAAGTAACCGG 59.580 50.000 0.00 0.00 0.00 5.28
2662 2765 8.739972 CAACCTTTTTAAGTATGCATAGTTCCT 58.260 33.333 26.30 9.15 0.00 3.36
2690 2793 0.969894 ACACACTCCTACTGGTCTGC 59.030 55.000 0.00 0.00 34.23 4.26
2787 2890 3.441222 CACATGTTCATAAGAAGGCAGCA 59.559 43.478 0.00 0.00 33.63 4.41
2792 2895 5.814705 GGAGACTCACATGTTCATAAGAAGG 59.185 44.000 4.53 0.00 33.63 3.46
2793 2896 6.638610 AGGAGACTCACATGTTCATAAGAAG 58.361 40.000 4.53 0.00 32.90 2.85
2813 2916 3.436704 TGCGCTTCACATTAAGAAAGGAG 59.563 43.478 9.73 0.00 0.00 3.69
2924 3027 3.366476 CCAGTCAGAACAGTTCTACGGAG 60.366 52.174 15.73 3.50 38.11 4.63
2975 3078 6.716628 TGTCAATGCAATCCTTTCTTTAGTCT 59.283 34.615 0.00 0.00 0.00 3.24
2988 3091 6.915544 TCAGAATAGAGTGTCAATGCAATC 57.084 37.500 0.00 0.00 34.13 2.67
2989 3092 7.555195 TGAATCAGAATAGAGTGTCAATGCAAT 59.445 33.333 0.00 0.00 0.00 3.56
2990 3093 6.880529 TGAATCAGAATAGAGTGTCAATGCAA 59.119 34.615 0.00 0.00 0.00 4.08
2991 3094 6.408869 TGAATCAGAATAGAGTGTCAATGCA 58.591 36.000 0.00 0.00 0.00 3.96
2992 3095 6.915544 TGAATCAGAATAGAGTGTCAATGC 57.084 37.500 0.00 0.00 0.00 3.56
2993 3096 8.944029 AGTTTGAATCAGAATAGAGTGTCAATG 58.056 33.333 0.00 0.00 0.00 2.82
2995 3098 9.424319 GTAGTTTGAATCAGAATAGAGTGTCAA 57.576 33.333 0.00 0.00 0.00 3.18
2996 3099 8.807118 AGTAGTTTGAATCAGAATAGAGTGTCA 58.193 33.333 0.00 0.00 0.00 3.58
2997 3100 9.646427 AAGTAGTTTGAATCAGAATAGAGTGTC 57.354 33.333 0.00 0.00 0.00 3.67
3004 3107 8.830580 GCAGCATAAGTAGTTTGAATCAGAATA 58.169 33.333 0.00 0.00 0.00 1.75
3005 3108 7.555554 AGCAGCATAAGTAGTTTGAATCAGAAT 59.444 33.333 0.00 0.00 0.00 2.40
3006 3109 6.881065 AGCAGCATAAGTAGTTTGAATCAGAA 59.119 34.615 0.00 0.00 0.00 3.02
3007 3110 6.409704 AGCAGCATAAGTAGTTTGAATCAGA 58.590 36.000 0.00 0.00 0.00 3.27
3008 3111 6.674694 AGCAGCATAAGTAGTTTGAATCAG 57.325 37.500 0.00 0.00 0.00 2.90
3009 3112 7.391554 AGAAAGCAGCATAAGTAGTTTGAATCA 59.608 33.333 0.00 0.00 0.00 2.57
3010 3113 7.695618 CAGAAAGCAGCATAAGTAGTTTGAATC 59.304 37.037 0.00 0.00 0.00 2.52
3011 3114 7.391554 TCAGAAAGCAGCATAAGTAGTTTGAAT 59.608 33.333 0.00 0.00 0.00 2.57
3012 3115 6.710295 TCAGAAAGCAGCATAAGTAGTTTGAA 59.290 34.615 0.00 0.00 0.00 2.69
3013 3116 6.230472 TCAGAAAGCAGCATAAGTAGTTTGA 58.770 36.000 0.00 0.00 0.00 2.69
3014 3117 6.486253 TCAGAAAGCAGCATAAGTAGTTTG 57.514 37.500 0.00 0.00 0.00 2.93
3015 3118 6.734104 CTCAGAAAGCAGCATAAGTAGTTT 57.266 37.500 0.00 0.00 0.00 2.66
3036 3139 3.929610 AGTTTCTATTGCGAACTCAGCTC 59.070 43.478 0.00 0.00 35.28 4.09
3047 3150 6.500684 TGGATTTGTCTCAGTTTCTATTGC 57.499 37.500 0.00 0.00 0.00 3.56
3053 3156 9.132521 CATAAACATTGGATTTGTCTCAGTTTC 57.867 33.333 0.00 0.00 0.00 2.78
3101 3204 9.860898 AGGCAAACTTCAGAAAATTTATGTATC 57.139 29.630 0.07 0.00 0.00 2.24
3104 3207 9.860898 GATAGGCAAACTTCAGAAAATTTATGT 57.139 29.630 0.07 0.00 0.00 2.29
3117 3221 4.938226 AGTTACAGCAGATAGGCAAACTTC 59.062 41.667 0.00 0.00 32.93 3.01
3127 3231 6.129874 ACTCAGTGGATAGTTACAGCAGATA 58.870 40.000 0.00 0.00 0.00 1.98
3136 3240 6.681729 ACCAAAGAACTCAGTGGATAGTTA 57.318 37.500 5.87 0.00 36.10 2.24
3232 3339 9.587772 GAATATATAACTGAACATCACCGCTAT 57.412 33.333 0.00 0.00 0.00 2.97
3305 3412 3.609853 TGGATCCAACACTATGAACAGC 58.390 45.455 13.46 0.00 0.00 4.40
3315 3422 2.297033 ACAAACTGCATGGATCCAACAC 59.703 45.455 20.67 11.68 0.00 3.32
3337 3444 5.365314 ACCTTTTTATGCAAACTGGGAAAGA 59.635 36.000 0.00 0.00 0.00 2.52
3362 3469 5.123186 CCAATGCTTCGTCACCTACAAAATA 59.877 40.000 0.00 0.00 0.00 1.40
3367 3474 1.943968 GCCAATGCTTCGTCACCTACA 60.944 52.381 0.00 0.00 33.53 2.74
3368 3475 0.727398 GCCAATGCTTCGTCACCTAC 59.273 55.000 0.00 0.00 33.53 3.18
3372 3479 0.527565 AATGGCCAATGCTTCGTCAC 59.472 50.000 10.96 0.00 37.74 3.67
3389 3496 4.667573 TCTACTCTGTCACTCTGACCAAT 58.332 43.478 0.00 0.00 46.40 3.16
3401 3508 7.681939 CAGAGGGAGTAATATCTACTCTGTC 57.318 44.000 17.25 14.75 41.29 3.51
3402 3509 7.156694 ACAGAGGGAGTAATATCTACTCTGT 57.843 40.000 16.14 16.14 46.83 3.41
3403 3510 7.332430 CGTACAGAGGGAGTAATATCTACTCTG 59.668 44.444 15.00 15.00 45.78 3.35
3419 3526 5.010719 TGCTCTTATATTTCCGTACAGAGGG 59.989 44.000 0.00 0.00 0.00 4.30
3420 3527 6.085555 TGCTCTTATATTTCCGTACAGAGG 57.914 41.667 0.00 0.00 0.00 3.69
3421 3528 8.594881 AAATGCTCTTATATTTCCGTACAGAG 57.405 34.615 0.00 0.00 0.00 3.35
3422 3529 9.692749 CTAAATGCTCTTATATTTCCGTACAGA 57.307 33.333 0.00 0.00 0.00 3.41
3423 3530 8.926710 CCTAAATGCTCTTATATTTCCGTACAG 58.073 37.037 0.00 0.00 0.00 2.74
3424 3531 8.426489 ACCTAAATGCTCTTATATTTCCGTACA 58.574 33.333 0.00 0.00 0.00 2.90
3425 3532 8.828688 ACCTAAATGCTCTTATATTTCCGTAC 57.171 34.615 0.00 0.00 0.00 3.67
3427 3534 7.441458 GTGACCTAAATGCTCTTATATTTCCGT 59.559 37.037 0.00 0.00 0.00 4.69
3428 3535 7.095187 GGTGACCTAAATGCTCTTATATTTCCG 60.095 40.741 0.00 0.00 0.00 4.30
3429 3536 7.719633 TGGTGACCTAAATGCTCTTATATTTCC 59.280 37.037 2.11 0.00 0.00 3.13
3430 3537 8.560374 GTGGTGACCTAAATGCTCTTATATTTC 58.440 37.037 2.11 0.00 0.00 2.17
3431 3538 8.275040 AGTGGTGACCTAAATGCTCTTATATTT 58.725 33.333 2.11 0.00 0.00 1.40
3432 3539 7.806180 AGTGGTGACCTAAATGCTCTTATATT 58.194 34.615 2.11 0.00 0.00 1.28
3433 3540 7.380423 AGTGGTGACCTAAATGCTCTTATAT 57.620 36.000 2.11 0.00 0.00 0.86
3435 3542 5.700402 AGTGGTGACCTAAATGCTCTTAT 57.300 39.130 2.11 0.00 0.00 1.73
3436 3543 5.499004 AAGTGGTGACCTAAATGCTCTTA 57.501 39.130 2.11 0.00 0.00 2.10
3438 3545 4.373156 AAAGTGGTGACCTAAATGCTCT 57.627 40.909 2.11 0.00 0.00 4.09
3439 3546 5.122396 CACTAAAGTGGTGACCTAAATGCTC 59.878 44.000 2.11 0.00 42.10 4.26
3441 3548 5.001232 TCACTAAAGTGGTGACCTAAATGC 58.999 41.667 10.11 0.00 45.65 3.56
3442 3549 7.106239 AGATCACTAAAGTGGTGACCTAAATG 58.894 38.462 10.11 0.00 44.82 2.32
3444 3551 6.681729 AGATCACTAAAGTGGTGACCTAAA 57.318 37.500 10.11 0.00 44.82 1.85
3447 3554 6.681729 TTTAGATCACTAAAGTGGTGACCT 57.318 37.500 10.11 0.00 44.82 3.85
3448 3555 6.183360 GCATTTAGATCACTAAAGTGGTGACC 60.183 42.308 10.11 0.00 46.97 4.02
3449 3556 6.595716 AGCATTTAGATCACTAAAGTGGTGAC 59.404 38.462 10.11 0.00 46.97 3.67
3450 3557 6.711277 AGCATTTAGATCACTAAAGTGGTGA 58.289 36.000 10.11 0.25 46.97 4.02
3452 3559 6.951971 AGAGCATTTAGATCACTAAAGTGGT 58.048 36.000 10.11 2.63 46.97 4.16
3453 3560 7.856145 AAGAGCATTTAGATCACTAAAGTGG 57.144 36.000 10.11 0.00 46.97 4.00
3469 3576 9.525826 CCCTCCATAAAGAATTATAAGAGCATT 57.474 33.333 0.00 0.00 33.65 3.56
3471 3578 8.275187 TCCCTCCATAAAGAATTATAAGAGCA 57.725 34.615 0.00 0.00 33.65 4.26
3472 3579 8.379331 ACTCCCTCCATAAAGAATTATAAGAGC 58.621 37.037 0.00 0.00 33.65 4.09
3480 3587 9.453830 AGATAAGTACTCCCTCCATAAAGAATT 57.546 33.333 0.00 0.00 0.00 2.17
3482 3589 9.364653 GTAGATAAGTACTCCCTCCATAAAGAA 57.635 37.037 0.00 0.00 0.00 2.52
3483 3590 8.734763 AGTAGATAAGTACTCCCTCCATAAAGA 58.265 37.037 0.00 0.00 0.00 2.52
3484 3591 8.943594 AGTAGATAAGTACTCCCTCCATAAAG 57.056 38.462 0.00 0.00 0.00 1.85
3487 3594 9.804977 GTTTAGTAGATAAGTACTCCCTCCATA 57.195 37.037 0.00 0.00 34.91 2.74
3488 3595 8.512813 AGTTTAGTAGATAAGTACTCCCTCCAT 58.487 37.037 0.00 0.00 34.91 3.41
3489 3596 7.880623 AGTTTAGTAGATAAGTACTCCCTCCA 58.119 38.462 0.00 0.00 34.91 3.86
3490 3597 8.631797 CAAGTTTAGTAGATAAGTACTCCCTCC 58.368 40.741 0.00 0.00 34.91 4.30
3491 3598 9.187996 ACAAGTTTAGTAGATAAGTACTCCCTC 57.812 37.037 0.00 0.00 34.91 4.30
3492 3599 8.968969 CACAAGTTTAGTAGATAAGTACTCCCT 58.031 37.037 0.00 0.00 34.91 4.20
3493 3600 8.964772 TCACAAGTTTAGTAGATAAGTACTCCC 58.035 37.037 0.00 0.00 34.91 4.30
3499 3606 9.930693 CTTCCTTCACAAGTTTAGTAGATAAGT 57.069 33.333 0.00 0.00 0.00 2.24
3500 3607 9.930693 ACTTCCTTCACAAGTTTAGTAGATAAG 57.069 33.333 0.00 0.00 29.29 1.73
3511 3618 8.293699 ACTATTGAAAACTTCCTTCACAAGTT 57.706 30.769 0.00 0.00 44.34 2.66
3512 3619 7.881775 ACTATTGAAAACTTCCTTCACAAGT 57.118 32.000 0.00 0.00 35.51 3.16
3513 3620 9.057089 AGTACTATTGAAAACTTCCTTCACAAG 57.943 33.333 0.00 0.00 32.61 3.16
3514 3621 8.974060 AGTACTATTGAAAACTTCCTTCACAA 57.026 30.769 0.00 0.00 32.61 3.33
3515 3622 8.974060 AAGTACTATTGAAAACTTCCTTCACA 57.026 30.769 0.00 0.00 32.61 3.58
3516 3623 9.274206 AGAAGTACTATTGAAAACTTCCTTCAC 57.726 33.333 9.73 0.00 45.75 3.18
3517 3624 9.273016 CAGAAGTACTATTGAAAACTTCCTTCA 57.727 33.333 9.73 0.00 45.75 3.02
3518 3625 8.231161 GCAGAAGTACTATTGAAAACTTCCTTC 58.769 37.037 9.95 0.00 45.75 3.46
3519 3626 7.719633 TGCAGAAGTACTATTGAAAACTTCCTT 59.280 33.333 9.95 0.00 45.75 3.36
3520 3627 7.224297 TGCAGAAGTACTATTGAAAACTTCCT 58.776 34.615 9.95 0.00 45.75 3.36
3521 3628 7.173390 ACTGCAGAAGTACTATTGAAAACTTCC 59.827 37.037 23.35 0.00 45.75 3.46
3544 3651 9.817365 CTCAAACATTCAGTAGAAATGTAACTG 57.183 33.333 2.24 0.00 37.29 3.16
3546 3653 9.813080 GACTCAAACATTCAGTAGAAATGTAAC 57.187 33.333 2.24 0.00 37.29 2.50
3564 3671 5.735324 GTTTACAGAAACTCGGACTCAAAC 58.265 41.667 0.00 0.00 41.55 2.93
3579 3686 2.886523 TCGGAACTCGGAAGTTTACAGA 59.113 45.455 0.00 0.00 45.80 3.41
3590 3697 2.683968 TGAAATTCTGTCGGAACTCGG 58.316 47.619 0.00 0.00 39.77 4.63
3631 3738 7.436673 GGATCAATCATAGTTGTGTCTACAGTC 59.563 40.741 0.00 0.00 38.23 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.