Multiple sequence alignment - TraesCS1B01G078600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G078600 chr1B 100.000 6313 0 0 1 6313 61529628 61523316 0.000000e+00 11659.0
1 TraesCS1B01G078600 chr1D 96.110 2211 56 10 1600 3801 41510364 41508175 0.000000e+00 3579.0
2 TraesCS1B01G078600 chr1D 94.977 1951 68 14 3800 5741 41508093 41506164 0.000000e+00 3033.0
3 TraesCS1B01G078600 chr1D 94.018 652 30 3 914 1563 41511007 41510363 0.000000e+00 979.0
4 TraesCS1B01G078600 chr1D 95.238 399 10 5 5752 6147 41506183 41505791 1.930000e-174 623.0
5 TraesCS1B01G078600 chr1D 91.406 256 19 3 692 945 41511274 41511020 1.300000e-91 348.0
6 TraesCS1B01G078600 chr1D 92.157 102 7 1 3625 3726 337216894 337216794 6.600000e-30 143.0
7 TraesCS1B01G078600 chr1A 94.850 1398 58 6 2065 3456 41361081 41359692 0.000000e+00 2170.0
8 TraesCS1B01G078600 chr1A 95.271 1163 42 9 923 2081 41362250 41361097 0.000000e+00 1831.0
9 TraesCS1B01G078600 chr1A 91.837 1225 82 15 4482 5698 41358368 41357154 0.000000e+00 1692.0
10 TraesCS1B01G078600 chr1A 86.792 795 59 19 3707 4469 41359589 41358809 0.000000e+00 845.0
11 TraesCS1B01G078600 chr1A 95.376 346 8 3 5799 6143 41357125 41356787 1.550000e-150 544.0
12 TraesCS1B01G078600 chr1A 86.849 365 24 14 569 930 41362626 41362283 2.760000e-103 387.0
13 TraesCS1B01G078600 chr1A 89.344 122 13 0 3508 3629 41359705 41359584 3.050000e-33 154.0
14 TraesCS1B01G078600 chr6D 84.371 2329 228 73 970 3255 159350700 159348465 0.000000e+00 2159.0
15 TraesCS1B01G078600 chr6D 82.738 1877 210 52 3707 5533 159345237 159343425 0.000000e+00 1567.0
16 TraesCS1B01G078600 chr6D 87.126 334 38 5 3248 3578 159345622 159345291 2.150000e-99 374.0
17 TraesCS1B01G078600 chr6A 87.297 1850 171 41 1803 3629 217641855 217640047 0.000000e+00 2056.0
18 TraesCS1B01G078600 chr6A 84.010 813 102 12 4732 5533 217638857 217638062 0.000000e+00 756.0
19 TraesCS1B01G078600 chr6A 83.912 777 71 22 3707 4453 217640052 217639300 0.000000e+00 693.0
20 TraesCS1B01G078600 chr6A 80.025 786 97 31 970 1726 217642623 217641869 1.560000e-145 527.0
21 TraesCS1B01G078600 chr6B 84.576 1945 209 55 970 2868 289696983 289695084 0.000000e+00 1845.0
22 TraesCS1B01G078600 chr6B 84.264 1182 149 20 4368 5533 289689349 289688189 0.000000e+00 1118.0
23 TraesCS1B01G078600 chr6B 87.434 756 63 16 2886 3629 289694989 289694254 0.000000e+00 841.0
24 TraesCS1B01G078600 chr6B 86.032 494 38 16 3769 4233 289690134 289689643 9.450000e-138 501.0
25 TraesCS1B01G078600 chr5D 90.751 173 15 1 359 531 189021746 189021917 4.920000e-56 230.0
26 TraesCS1B01G078600 chr5D 91.429 105 8 1 3609 3712 267846577 267846681 6.600000e-30 143.0
27 TraesCS1B01G078600 chr3D 90.230 174 17 0 355 528 433161276 433161449 1.770000e-55 228.0
28 TraesCS1B01G078600 chr3D 90.476 168 16 0 361 528 54386251 54386084 8.240000e-54 222.0
29 TraesCS1B01G078600 chr3D 90.000 170 17 0 362 531 375698911 375699080 2.960000e-53 220.0
30 TraesCS1B01G078600 chr3D 87.568 185 22 1 345 529 2350742 2350559 4.960000e-51 213.0
31 TraesCS1B01G078600 chr3D 98.824 85 1 0 3628 3712 121985624 121985540 1.100000e-32 152.0
32 TraesCS1B01G078600 chr3D 98.824 85 1 0 3628 3712 180394992 180394908 1.100000e-32 152.0
33 TraesCS1B01G078600 chr5A 90.533 169 16 0 361 529 505768643 505768811 2.290000e-54 224.0
34 TraesCS1B01G078600 chr5A 90.476 105 8 1 3608 3712 13409909 13410011 3.070000e-28 137.0
35 TraesCS1B01G078600 chr2B 90.476 168 16 0 364 531 208426745 208426578 8.240000e-54 222.0
36 TraesCS1B01G078600 chr4B 87.302 189 22 2 347 534 618189786 618189973 1.380000e-51 215.0
37 TraesCS1B01G078600 chr2D 86.000 200 24 3 355 550 161647851 161648050 1.780000e-50 211.0
38 TraesCS1B01G078600 chr4D 95.652 92 3 1 3628 3719 224838523 224838613 5.100000e-31 147.0
39 TraesCS1B01G078600 chr4D 94.681 94 5 0 3620 3713 236940219 236940126 5.100000e-31 147.0
40 TraesCS1B01G078600 chr7D 92.929 99 6 1 3615 3713 141292076 141292173 6.600000e-30 143.0
41 TraesCS1B01G078600 chr7D 80.508 118 19 4 38 154 608143454 608143340 3.140000e-13 87.9
42 TraesCS1B01G078600 chr7A 81.356 118 18 4 38 154 700525247 700525361 6.740000e-15 93.5
43 TraesCS1B01G078600 chr4A 78.641 103 15 5 58 155 620931949 620931849 1.900000e-05 62.1
44 TraesCS1B01G078600 chr4A 86.792 53 2 4 44 93 654833625 654833575 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G078600 chr1B 61523316 61529628 6312 True 11659.000000 11659 100.000000 1 6313 1 chr1B.!!$R1 6312
1 TraesCS1B01G078600 chr1D 41505791 41511274 5483 True 1712.400000 3579 94.349800 692 6147 5 chr1D.!!$R2 5455
2 TraesCS1B01G078600 chr1A 41356787 41362626 5839 True 1089.000000 2170 91.474143 569 6143 7 chr1A.!!$R1 5574
3 TraesCS1B01G078600 chr6D 159343425 159350700 7275 True 1366.666667 2159 84.745000 970 5533 3 chr6D.!!$R1 4563
4 TraesCS1B01G078600 chr6A 217638062 217642623 4561 True 1008.000000 2056 83.811000 970 5533 4 chr6A.!!$R1 4563
5 TraesCS1B01G078600 chr6B 289694254 289696983 2729 True 1343.000000 1845 86.005000 970 3629 2 chr6B.!!$R2 2659
6 TraesCS1B01G078600 chr6B 289688189 289690134 1945 True 809.500000 1118 85.148000 3769 5533 2 chr6B.!!$R1 1764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 692 1.004560 CGTGCTCCACAGGACACAT 60.005 57.895 14.53 0.00 41.01 3.21 F
1182 1235 0.250234 CATCCCGCTTCTGGTGAGAA 59.750 55.000 0.00 0.00 36.72 2.87 F
2111 2237 0.737219 CTGCTGCTTATCCCTGTTGC 59.263 55.000 0.00 0.00 0.00 4.17 F
2513 2657 3.230976 CCTAGGGTGCAATATTTTCCCC 58.769 50.000 0.00 9.35 38.97 4.81 F
3094 3323 3.565307 GCATGGTGGGGATGAATTTCTA 58.435 45.455 0.00 0.00 0.00 2.10 F
4476 7895 0.604578 GGTGTGCATCATGGCTTTGT 59.395 50.000 0.00 0.00 34.04 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2078 2204 1.068055 GCAGCAGAACCCAACATCAAG 60.068 52.381 0.00 0.0 0.00 3.02 R
2779 2926 3.334583 ACGAGCCATATTGAACTGTGT 57.665 42.857 0.00 0.0 0.00 3.72 R
3943 7130 2.100252 CCCTTTCATGCTGCTACCAATG 59.900 50.000 0.00 0.0 0.00 2.82 R
4441 7853 0.452987 CACCGCCCTTTCACATCATG 59.547 55.000 0.00 0.0 0.00 3.07 R
4680 8755 0.178903 TGGAGAACCACCCAGCTACT 60.179 55.000 0.00 0.0 41.77 2.57 R
6242 10340 0.108585 TTTGTCCTGCTGACTCCACC 59.891 55.000 8.16 0.0 44.75 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 9.453572 AACTAATTTCACTCATTCAAGATAGCA 57.546 29.630 0.00 0.00 0.00 3.49
95 96 9.453572 ACTAATTTCACTCATTCAAGATAGCAA 57.546 29.630 0.00 0.00 0.00 3.91
100 101 9.630098 TTTCACTCATTCAAGATAGCAAATTTC 57.370 29.630 0.00 0.00 0.00 2.17
101 102 8.339344 TCACTCATTCAAGATAGCAAATTTCA 57.661 30.769 0.00 0.00 0.00 2.69
102 103 8.239314 TCACTCATTCAAGATAGCAAATTTCAC 58.761 33.333 0.00 0.00 0.00 3.18
103 104 8.242053 CACTCATTCAAGATAGCAAATTTCACT 58.758 33.333 0.00 0.00 0.00 3.41
104 105 8.457261 ACTCATTCAAGATAGCAAATTTCACTC 58.543 33.333 0.00 0.00 0.00 3.51
105 106 8.339344 TCATTCAAGATAGCAAATTTCACTCA 57.661 30.769 0.00 0.00 0.00 3.41
106 107 8.239314 TCATTCAAGATAGCAAATTTCACTCAC 58.761 33.333 0.00 0.00 0.00 3.51
107 108 6.500684 TCAAGATAGCAAATTTCACTCACC 57.499 37.500 0.00 0.00 0.00 4.02
108 109 5.122239 TCAAGATAGCAAATTTCACTCACCG 59.878 40.000 0.00 0.00 0.00 4.94
109 110 4.832248 AGATAGCAAATTTCACTCACCGA 58.168 39.130 0.00 0.00 0.00 4.69
110 111 5.245531 AGATAGCAAATTTCACTCACCGAA 58.754 37.500 0.00 0.00 0.00 4.30
111 112 5.705441 AGATAGCAAATTTCACTCACCGAAA 59.295 36.000 0.00 0.00 36.83 3.46
112 113 4.647424 AGCAAATTTCACTCACCGAAAA 57.353 36.364 0.00 0.00 36.06 2.29
113 114 5.004922 AGCAAATTTCACTCACCGAAAAA 57.995 34.783 0.00 0.00 36.06 1.94
178 179 6.687081 TTTTTAAAAGTCCGCTCTTCTCAA 57.313 33.333 0.14 0.00 0.00 3.02
179 180 6.687081 TTTTAAAAGTCCGCTCTTCTCAAA 57.313 33.333 0.00 0.00 0.00 2.69
180 181 6.687081 TTTAAAAGTCCGCTCTTCTCAAAA 57.313 33.333 0.00 0.00 0.00 2.44
181 182 4.820284 AAAAGTCCGCTCTTCTCAAAAG 57.180 40.909 0.00 0.00 0.00 2.27
182 183 3.753294 AAGTCCGCTCTTCTCAAAAGA 57.247 42.857 0.00 0.00 0.00 2.52
183 184 3.033368 AGTCCGCTCTTCTCAAAAGAC 57.967 47.619 0.00 0.00 0.00 3.01
184 185 2.070028 GTCCGCTCTTCTCAAAAGACC 58.930 52.381 0.00 0.00 0.00 3.85
185 186 1.071605 CCGCTCTTCTCAAAAGACCG 58.928 55.000 0.00 0.00 0.00 4.79
186 187 1.336887 CCGCTCTTCTCAAAAGACCGA 60.337 52.381 4.53 0.00 29.46 4.69
187 188 2.611518 CGCTCTTCTCAAAAGACCGAT 58.388 47.619 0.00 0.00 29.46 4.18
188 189 2.996621 CGCTCTTCTCAAAAGACCGATT 59.003 45.455 0.00 0.00 29.46 3.34
189 190 3.433615 CGCTCTTCTCAAAAGACCGATTT 59.566 43.478 0.00 0.00 29.46 2.17
190 191 4.434857 CGCTCTTCTCAAAAGACCGATTTC 60.435 45.833 0.00 0.00 29.46 2.17
191 192 4.693095 GCTCTTCTCAAAAGACCGATTTCT 59.307 41.667 0.00 0.00 0.00 2.52
192 193 5.163903 GCTCTTCTCAAAAGACCGATTTCTC 60.164 44.000 0.00 0.00 0.00 2.87
193 194 6.102897 TCTTCTCAAAAGACCGATTTCTCT 57.897 37.500 0.00 0.00 0.00 3.10
194 195 7.228314 TCTTCTCAAAAGACCGATTTCTCTA 57.772 36.000 0.00 0.00 0.00 2.43
195 196 7.667557 TCTTCTCAAAAGACCGATTTCTCTAA 58.332 34.615 0.00 0.00 0.00 2.10
196 197 8.148351 TCTTCTCAAAAGACCGATTTCTCTAAA 58.852 33.333 0.00 0.00 0.00 1.85
197 198 7.653767 TCTCAAAAGACCGATTTCTCTAAAC 57.346 36.000 0.00 0.00 0.00 2.01
198 199 7.214381 TCTCAAAAGACCGATTTCTCTAAACA 58.786 34.615 0.00 0.00 0.00 2.83
199 200 7.713507 TCTCAAAAGACCGATTTCTCTAAACAA 59.286 33.333 0.00 0.00 0.00 2.83
200 201 8.215926 TCAAAAGACCGATTTCTCTAAACAAA 57.784 30.769 0.00 0.00 0.00 2.83
201 202 8.126700 TCAAAAGACCGATTTCTCTAAACAAAC 58.873 33.333 0.00 0.00 0.00 2.93
202 203 7.562454 AAAGACCGATTTCTCTAAACAAACA 57.438 32.000 0.00 0.00 0.00 2.83
203 204 7.562454 AAGACCGATTTCTCTAAACAAACAA 57.438 32.000 0.00 0.00 0.00 2.83
204 205 7.562454 AGACCGATTTCTCTAAACAAACAAA 57.438 32.000 0.00 0.00 0.00 2.83
205 206 7.992008 AGACCGATTTCTCTAAACAAACAAAA 58.008 30.769 0.00 0.00 0.00 2.44
206 207 8.129211 AGACCGATTTCTCTAAACAAACAAAAG 58.871 33.333 0.00 0.00 0.00 2.27
207 208 7.992008 ACCGATTTCTCTAAACAAACAAAAGA 58.008 30.769 0.00 0.00 0.00 2.52
208 209 8.630037 ACCGATTTCTCTAAACAAACAAAAGAT 58.370 29.630 0.00 0.00 0.00 2.40
209 210 9.463443 CCGATTTCTCTAAACAAACAAAAGATT 57.537 29.630 0.00 0.00 0.00 2.40
235 236 8.355809 CTTTCTTTTTGCGAAAGAAACAAAAG 57.644 30.769 24.83 16.48 45.76 2.27
236 237 7.644986 TTCTTTTTGCGAAAGAAACAAAAGA 57.355 28.000 19.50 7.08 42.38 2.52
237 238 7.826260 TCTTTTTGCGAAAGAAACAAAAGAT 57.174 28.000 11.37 0.00 42.38 2.40
238 239 8.250538 TCTTTTTGCGAAAGAAACAAAAGATT 57.749 26.923 11.37 0.00 42.38 2.40
239 240 8.379902 TCTTTTTGCGAAAGAAACAAAAGATTC 58.620 29.630 11.37 0.00 42.38 2.52
240 241 7.588143 TTTTGCGAAAGAAACAAAAGATTCA 57.412 28.000 0.00 0.00 38.11 2.57
241 242 6.567769 TTGCGAAAGAAACAAAAGATTCAC 57.432 33.333 0.00 0.00 0.00 3.18
242 243 5.890334 TGCGAAAGAAACAAAAGATTCACT 58.110 33.333 0.00 0.00 0.00 3.41
243 244 6.329496 TGCGAAAGAAACAAAAGATTCACTT 58.671 32.000 0.00 0.00 40.98 3.16
244 245 7.476667 TGCGAAAGAAACAAAAGATTCACTTA 58.523 30.769 0.00 0.00 37.93 2.24
245 246 8.134895 TGCGAAAGAAACAAAAGATTCACTTAT 58.865 29.630 0.00 0.00 37.93 1.73
246 247 8.968242 GCGAAAGAAACAAAAGATTCACTTATT 58.032 29.630 0.00 0.00 37.93 1.40
373 374 9.565090 TCATTCATTTCAAATATACTCCCTCTG 57.435 33.333 0.00 0.00 0.00 3.35
374 375 9.347240 CATTCATTTCAAATATACTCCCTCTGT 57.653 33.333 0.00 0.00 0.00 3.41
375 376 9.927081 ATTCATTTCAAATATACTCCCTCTGTT 57.073 29.630 0.00 0.00 0.00 3.16
376 377 8.964476 TCATTTCAAATATACTCCCTCTGTTC 57.036 34.615 0.00 0.00 0.00 3.18
377 378 7.993183 TCATTTCAAATATACTCCCTCTGTTCC 59.007 37.037 0.00 0.00 0.00 3.62
378 379 7.510675 TTTCAAATATACTCCCTCTGTTCCT 57.489 36.000 0.00 0.00 0.00 3.36
379 380 8.618240 TTTCAAATATACTCCCTCTGTTCCTA 57.382 34.615 0.00 0.00 0.00 2.94
380 381 8.618240 TTCAAATATACTCCCTCTGTTCCTAA 57.382 34.615 0.00 0.00 0.00 2.69
381 382 8.618240 TCAAATATACTCCCTCTGTTCCTAAA 57.382 34.615 0.00 0.00 0.00 1.85
382 383 9.225682 TCAAATATACTCCCTCTGTTCCTAAAT 57.774 33.333 0.00 0.00 0.00 1.40
388 389 9.900112 ATACTCCCTCTGTTCCTAAATATAAGT 57.100 33.333 0.00 0.00 0.00 2.24
390 391 9.900112 ACTCCCTCTGTTCCTAAATATAAGTAT 57.100 33.333 0.00 0.00 0.00 2.12
415 416 9.840427 ATTGTTAGAAATTTCAAATGGACTACG 57.160 29.630 19.99 0.00 0.00 3.51
416 417 8.610248 TGTTAGAAATTTCAAATGGACTACGA 57.390 30.769 19.99 0.00 0.00 3.43
417 418 8.500773 TGTTAGAAATTTCAAATGGACTACGAC 58.499 33.333 19.99 1.37 0.00 4.34
418 419 8.500773 GTTAGAAATTTCAAATGGACTACGACA 58.499 33.333 19.99 0.00 0.00 4.35
419 420 7.687941 AGAAATTTCAAATGGACTACGACAT 57.312 32.000 19.99 0.00 0.00 3.06
420 421 8.786826 AGAAATTTCAAATGGACTACGACATA 57.213 30.769 19.99 0.00 0.00 2.29
421 422 8.665685 AGAAATTTCAAATGGACTACGACATAC 58.334 33.333 19.99 0.00 0.00 2.39
423 424 4.968812 TCAAATGGACTACGACATACGA 57.031 40.909 0.00 0.00 45.77 3.43
424 425 5.313520 TCAAATGGACTACGACATACGAA 57.686 39.130 0.00 0.00 45.77 3.85
425 426 5.898174 TCAAATGGACTACGACATACGAAT 58.102 37.500 0.00 0.00 45.77 3.34
426 427 5.746721 TCAAATGGACTACGACATACGAATG 59.253 40.000 0.00 0.00 45.77 2.67
428 429 6.381481 AATGGACTACGACATACGAATGTA 57.619 37.500 0.00 0.00 46.49 2.29
429 430 6.570672 ATGGACTACGACATACGAATGTAT 57.429 37.500 0.00 0.00 46.49 2.29
430 431 7.677454 ATGGACTACGACATACGAATGTATA 57.323 36.000 0.00 0.00 46.49 1.47
431 432 7.677454 TGGACTACGACATACGAATGTATAT 57.323 36.000 0.00 0.00 46.49 0.86
432 433 7.524065 TGGACTACGACATACGAATGTATATG 58.476 38.462 0.00 0.00 46.49 1.78
433 434 6.965500 GGACTACGACATACGAATGTATATGG 59.035 42.308 0.00 0.00 46.49 2.74
434 435 7.148356 GGACTACGACATACGAATGTATATGGA 60.148 40.741 0.00 0.00 46.49 3.41
435 436 7.524912 ACTACGACATACGAATGTATATGGAC 58.475 38.462 0.00 0.00 46.49 4.02
436 437 6.321848 ACGACATACGAATGTATATGGACA 57.678 37.500 0.00 0.00 46.49 4.02
437 438 6.920817 ACGACATACGAATGTATATGGACAT 58.079 36.000 0.00 0.00 46.49 3.06
438 439 8.047413 ACGACATACGAATGTATATGGACATA 57.953 34.615 0.00 0.00 46.49 2.29
439 440 8.683615 ACGACATACGAATGTATATGGACATAT 58.316 33.333 9.53 9.53 46.49 1.78
440 441 9.516314 CGACATACGAATGTATATGGACATATT 57.484 33.333 9.84 0.00 46.49 1.28
467 468 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
468 469 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
469 470 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
470 471 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
471 472 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
472 473 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
473 474 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
474 475 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
475 476 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
476 477 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
477 478 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
478 479 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
479 480 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
480 481 5.339008 TCATTTTGCTCCGTATGTAGTCT 57.661 39.130 0.00 0.00 0.00 3.24
481 482 5.730550 TCATTTTGCTCCGTATGTAGTCTT 58.269 37.500 0.00 0.00 0.00 3.01
482 483 6.170506 TCATTTTGCTCCGTATGTAGTCTTT 58.829 36.000 0.00 0.00 0.00 2.52
483 484 6.653320 TCATTTTGCTCCGTATGTAGTCTTTT 59.347 34.615 0.00 0.00 0.00 2.27
484 485 5.856126 TTTGCTCCGTATGTAGTCTTTTG 57.144 39.130 0.00 0.00 0.00 2.44
485 486 4.530710 TGCTCCGTATGTAGTCTTTTGT 57.469 40.909 0.00 0.00 0.00 2.83
486 487 4.890088 TGCTCCGTATGTAGTCTTTTGTT 58.110 39.130 0.00 0.00 0.00 2.83
487 488 4.688879 TGCTCCGTATGTAGTCTTTTGTTG 59.311 41.667 0.00 0.00 0.00 3.33
488 489 4.092968 GCTCCGTATGTAGTCTTTTGTTGG 59.907 45.833 0.00 0.00 0.00 3.77
489 490 5.471556 TCCGTATGTAGTCTTTTGTTGGA 57.528 39.130 0.00 0.00 0.00 3.53
490 491 5.856156 TCCGTATGTAGTCTTTTGTTGGAA 58.144 37.500 0.00 0.00 0.00 3.53
491 492 6.469410 TCCGTATGTAGTCTTTTGTTGGAAT 58.531 36.000 0.00 0.00 0.00 3.01
492 493 6.592607 TCCGTATGTAGTCTTTTGTTGGAATC 59.407 38.462 0.00 0.00 0.00 2.52
493 494 6.594159 CCGTATGTAGTCTTTTGTTGGAATCT 59.406 38.462 0.00 0.00 0.00 2.40
494 495 7.201530 CCGTATGTAGTCTTTTGTTGGAATCTC 60.202 40.741 0.00 0.00 0.00 2.75
495 496 7.545965 CGTATGTAGTCTTTTGTTGGAATCTCT 59.454 37.037 0.00 0.00 0.00 3.10
496 497 9.871238 GTATGTAGTCTTTTGTTGGAATCTCTA 57.129 33.333 0.00 0.00 0.00 2.43
524 525 8.423906 AAGACTTACATTTAGGAACAGAGAGA 57.576 34.615 0.00 0.00 0.00 3.10
525 526 8.062065 AGACTTACATTTAGGAACAGAGAGAG 57.938 38.462 0.00 0.00 0.00 3.20
526 527 7.672239 AGACTTACATTTAGGAACAGAGAGAGT 59.328 37.037 0.00 0.00 0.00 3.24
527 528 8.880991 ACTTACATTTAGGAACAGAGAGAGTA 57.119 34.615 0.00 0.00 0.00 2.59
528 529 8.741841 ACTTACATTTAGGAACAGAGAGAGTAC 58.258 37.037 0.00 0.00 0.00 2.73
529 530 8.645814 TTACATTTAGGAACAGAGAGAGTACA 57.354 34.615 0.00 0.00 0.00 2.90
530 531 7.726033 ACATTTAGGAACAGAGAGAGTACAT 57.274 36.000 0.00 0.00 0.00 2.29
531 532 8.824756 ACATTTAGGAACAGAGAGAGTACATA 57.175 34.615 0.00 0.00 0.00 2.29
532 533 9.427821 ACATTTAGGAACAGAGAGAGTACATAT 57.572 33.333 0.00 0.00 0.00 1.78
538 539 9.482175 AGGAACAGAGAGAGTACATATTTTACT 57.518 33.333 0.00 0.00 32.23 2.24
562 563 9.045223 ACTAATTTCAAAAAGTTGATTTCAGCC 57.955 29.630 0.00 0.00 43.29 4.85
563 564 7.862512 AATTTCAAAAAGTTGATTTCAGCCA 57.137 28.000 0.00 0.00 43.29 4.75
564 565 8.454570 AATTTCAAAAAGTTGATTTCAGCCAT 57.545 26.923 0.00 0.00 43.29 4.40
565 566 7.862512 TTTCAAAAAGTTGATTTCAGCCATT 57.137 28.000 0.00 0.00 43.29 3.16
566 567 7.862512 TTCAAAAAGTTGATTTCAGCCATTT 57.137 28.000 0.00 0.00 43.29 2.32
567 568 7.862512 TCAAAAAGTTGATTTCAGCCATTTT 57.137 28.000 4.04 4.04 38.88 1.82
678 681 3.873883 GCAGCTGCATCGTGCTCC 61.874 66.667 33.36 0.00 45.31 4.70
679 682 2.435410 CAGCTGCATCGTGCTCCA 60.435 61.111 0.00 0.00 45.31 3.86
680 683 2.435586 AGCTGCATCGTGCTCCAC 60.436 61.111 1.02 0.00 45.31 4.02
681 684 2.743538 GCTGCATCGTGCTCCACA 60.744 61.111 10.54 0.00 45.31 4.17
682 685 2.747822 GCTGCATCGTGCTCCACAG 61.748 63.158 10.54 0.00 45.31 3.66
683 686 2.046988 TGCATCGTGCTCCACAGG 60.047 61.111 10.54 0.00 45.31 4.00
684 687 2.265739 GCATCGTGCTCCACAGGA 59.734 61.111 3.20 0.00 46.51 3.86
685 688 2.103042 GCATCGTGCTCCACAGGAC 61.103 63.158 3.20 0.00 45.37 3.85
686 689 1.293179 CATCGTGCTCCACAGGACA 59.707 57.895 0.00 0.00 45.37 4.02
687 690 1.016130 CATCGTGCTCCACAGGACAC 61.016 60.000 8.00 8.00 45.37 3.67
688 691 1.471829 ATCGTGCTCCACAGGACACA 61.472 55.000 14.53 1.41 45.37 3.72
689 692 1.004560 CGTGCTCCACAGGACACAT 60.005 57.895 14.53 0.00 41.01 3.21
690 693 1.293963 CGTGCTCCACAGGACACATG 61.294 60.000 14.53 0.00 41.01 3.21
903 907 4.853142 TAGCATCGTCCCGCCCCT 62.853 66.667 0.00 0.00 0.00 4.79
915 919 3.458163 GCCCCTCGACATCCACGA 61.458 66.667 0.00 0.00 38.11 4.35
920 924 1.514228 CTCGACATCCACGACACCG 60.514 63.158 0.00 0.00 42.50 4.94
1059 1109 1.412343 GCTCTCCTCATCCTCCTCAAC 59.588 57.143 0.00 0.00 0.00 3.18
1182 1235 0.250234 CATCCCGCTTCTGGTGAGAA 59.750 55.000 0.00 0.00 36.72 2.87
1198 1252 1.349357 GAGAACCCCTCTATCATGCCC 59.651 57.143 0.00 0.00 38.86 5.36
1271 1332 4.140536 TGTTGTGGATCAATGCAACTGTA 58.859 39.130 16.22 1.53 41.04 2.74
1272 1333 4.216042 TGTTGTGGATCAATGCAACTGTAG 59.784 41.667 16.22 0.00 41.04 2.74
1273 1334 4.284829 TGTGGATCAATGCAACTGTAGA 57.715 40.909 0.00 0.00 0.00 2.59
1274 1335 4.002982 TGTGGATCAATGCAACTGTAGAC 58.997 43.478 0.00 0.00 0.00 2.59
1275 1336 4.256920 GTGGATCAATGCAACTGTAGACT 58.743 43.478 0.00 0.00 0.00 3.24
1276 1337 4.093998 GTGGATCAATGCAACTGTAGACTG 59.906 45.833 0.00 0.00 0.00 3.51
1277 1338 4.256920 GGATCAATGCAACTGTAGACTGT 58.743 43.478 0.00 0.00 0.00 3.55
1318 1379 2.302733 TGCCAAATGTAGCAGTGAGAGA 59.697 45.455 0.00 0.00 33.08 3.10
1371 1432 4.088762 AAGTGCGCGCGGTTCATG 62.089 61.111 33.06 1.02 0.00 3.07
1439 1509 1.608055 TGAGTTTGTGCATCCCTGTG 58.392 50.000 0.00 0.00 0.00 3.66
1457 1533 6.492429 TCCCTGTGTGCTAAGTATTATATCGT 59.508 38.462 0.00 0.00 0.00 3.73
1928 2017 7.968405 GCACAATTGTAGTTTTTCCTCGAATAT 59.032 33.333 11.53 0.00 0.00 1.28
1968 2061 1.477700 AGGCGCATATGCACAATTGTT 59.522 42.857 26.52 0.00 42.21 2.83
2007 2101 4.082190 GCCAATGTTTTAGAAGTTCTCCCC 60.082 45.833 9.12 0.00 0.00 4.81
2078 2204 7.865385 TGTGGTTTATGCTTTTATGTTGTCTTC 59.135 33.333 0.00 0.00 0.00 2.87
2111 2237 0.737219 CTGCTGCTTATCCCTGTTGC 59.263 55.000 0.00 0.00 0.00 4.17
2230 2358 8.423349 ACAGTTATGCCATTATATGCAATTGTT 58.577 29.630 7.40 0.00 41.50 2.83
2361 2503 4.955811 TGATATGGCTTGTAATCCTCGT 57.044 40.909 0.00 0.00 0.00 4.18
2454 2596 8.980481 AGGTGAATCTCTTTTACTCTGAAAAA 57.020 30.769 0.00 0.00 0.00 1.94
2513 2657 3.230976 CCTAGGGTGCAATATTTTCCCC 58.769 50.000 0.00 9.35 38.97 4.81
2614 2759 4.062293 GCCACAGTAAATGACACACTACA 58.938 43.478 0.00 0.00 0.00 2.74
2775 2922 5.854010 TGGATACTTAAGGCACTCTACAG 57.146 43.478 7.53 0.00 34.70 2.74
2776 2923 5.269991 TGGATACTTAAGGCACTCTACAGT 58.730 41.667 7.53 0.00 34.70 3.55
2777 2924 5.360144 TGGATACTTAAGGCACTCTACAGTC 59.640 44.000 7.53 0.00 34.70 3.51
2778 2925 5.595133 GGATACTTAAGGCACTCTACAGTCT 59.405 44.000 7.53 0.00 38.49 3.24
2779 2926 6.771749 GGATACTTAAGGCACTCTACAGTCTA 59.228 42.308 7.53 0.00 38.49 2.59
2780 2927 5.900865 ACTTAAGGCACTCTACAGTCTAC 57.099 43.478 7.53 0.00 38.49 2.59
2781 2928 5.322754 ACTTAAGGCACTCTACAGTCTACA 58.677 41.667 7.53 0.00 38.49 2.74
2796 2943 5.046304 ACAGTCTACACAGTTCAATATGGCT 60.046 40.000 0.00 0.00 0.00 4.75
2797 2944 5.521735 CAGTCTACACAGTTCAATATGGCTC 59.478 44.000 0.00 0.00 0.00 4.70
2863 3010 4.383173 TGTCCACTCATAATGCTATGCAG 58.617 43.478 0.00 0.00 43.65 4.41
3094 3323 3.565307 GCATGGTGGGGATGAATTTCTA 58.435 45.455 0.00 0.00 0.00 2.10
3457 6544 6.771076 TCACAGACGTTCATATATTTGTTGC 58.229 36.000 0.00 0.00 0.00 4.17
3584 6680 8.367911 TGTTCTCCATATGACCATATACACTTC 58.632 37.037 3.65 0.00 33.01 3.01
3614 6710 6.513806 TTAGTTGTCGCTGTACATTACCTA 57.486 37.500 0.00 0.00 0.00 3.08
3634 6730 7.191593 ACCTATTTGTTACGAAATACTCCCT 57.808 36.000 0.00 0.00 0.00 4.20
3635 6731 7.270779 ACCTATTTGTTACGAAATACTCCCTC 58.729 38.462 0.00 0.00 0.00 4.30
3636 6732 7.125356 ACCTATTTGTTACGAAATACTCCCTCT 59.875 37.037 0.00 0.00 0.00 3.69
3705 6801 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
3712 6808 5.997384 ATATTATGGGACGGAGGAAGTAC 57.003 43.478 0.00 0.00 0.00 2.73
3861 7044 4.936411 GCTTGAGTAGACTTTACCCTTTCC 59.064 45.833 0.00 0.00 0.00 3.13
4064 7276 7.701539 TGTCATGAAGCTGGTTAATGTTAAT 57.298 32.000 14.82 0.00 29.61 1.40
4075 7287 8.034804 GCTGGTTAATGTTAATCATTTCTGGTT 58.965 33.333 8.06 0.00 43.33 3.67
4142 7354 5.301298 ACTTGCTTTCTTTGAGAAGCTGAAT 59.699 36.000 9.19 0.00 35.37 2.57
4270 7679 9.602568 TGTTGAACTTTGTGTTATGTCTTACTA 57.397 29.630 0.00 0.00 39.30 1.82
4456 7875 2.161855 TGTGACATGATGTGAAAGGGC 58.838 47.619 1.23 0.00 0.00 5.19
4472 7891 3.136123 GCGGTGTGCATCATGGCT 61.136 61.111 0.00 0.00 45.45 4.75
4473 7892 2.703798 GCGGTGTGCATCATGGCTT 61.704 57.895 0.00 0.00 45.45 4.35
4476 7895 0.604578 GGTGTGCATCATGGCTTTGT 59.395 50.000 0.00 0.00 34.04 2.83
4477 7896 1.670674 GGTGTGCATCATGGCTTTGTG 60.671 52.381 0.00 0.00 34.04 3.33
4479 7898 2.228582 GTGTGCATCATGGCTTTGTGTA 59.771 45.455 0.00 0.00 34.04 2.90
4480 7899 3.090790 TGTGCATCATGGCTTTGTGTAT 58.909 40.909 0.00 0.00 34.04 2.29
4710 8785 3.788227 TGGTTCTCCACATTAGCACTT 57.212 42.857 0.00 0.00 39.03 3.16
4728 8803 7.472334 AGCACTTGATCTTCATAATTTTGGT 57.528 32.000 0.00 0.00 0.00 3.67
4877 8952 5.920193 ATCTATCTCTAATGGCTGCTCTC 57.080 43.478 0.00 0.00 0.00 3.20
4880 8955 4.605640 ATCTCTAATGGCTGCTCTCTTC 57.394 45.455 0.00 0.00 0.00 2.87
4953 9033 6.639686 CAGTGACAAATTTCTTTGGATCAGTG 59.360 38.462 0.00 9.92 44.97 3.66
5101 9181 6.568869 AGAAGATCAAACATAGAAGAGACGG 58.431 40.000 0.00 0.00 0.00 4.79
5240 9321 2.165167 CAGCTGGAAGGCAAGAATTCA 58.835 47.619 5.57 0.00 34.17 2.57
5323 9404 5.301555 GCTATCAATGTAGGAAGGAACTCC 58.698 45.833 0.00 0.00 38.49 3.85
5329 9410 4.038271 TGTAGGAAGGAACTCCGAAGTA 57.962 45.455 0.00 0.00 38.49 2.24
5512 9605 6.705782 CGTAGTTTTTGTATGGTATGCTCTG 58.294 40.000 0.00 0.00 0.00 3.35
5514 9607 5.256474 AGTTTTTGTATGGTATGCTCTGCT 58.744 37.500 0.00 0.00 0.00 4.24
5515 9608 5.711976 AGTTTTTGTATGGTATGCTCTGCTT 59.288 36.000 0.00 0.00 0.00 3.91
5553 9647 7.288389 ACGTAGGAAACTATATTGGTGGACATA 59.712 37.037 0.00 0.00 46.56 2.29
5717 9811 8.549548 CAAATGTGCAAAAATTCAGATGTTACA 58.450 29.630 0.00 0.00 0.00 2.41
5730 9824 8.918202 TTCAGATGTTACATAAGGAAAACACT 57.082 30.769 0.00 0.00 34.89 3.55
5734 9828 8.947115 AGATGTTACATAAGGAAAACACTAAGC 58.053 33.333 0.00 0.00 34.89 3.09
5735 9829 8.630054 ATGTTACATAAGGAAAACACTAAGCA 57.370 30.769 0.00 0.00 34.89 3.91
5736 9830 8.094798 TGTTACATAAGGAAAACACTAAGCAG 57.905 34.615 0.00 0.00 0.00 4.24
5737 9831 7.717875 TGTTACATAAGGAAAACACTAAGCAGT 59.282 33.333 0.00 0.00 34.42 4.40
5738 9832 6.803154 ACATAAGGAAAACACTAAGCAGTC 57.197 37.500 0.00 0.00 30.46 3.51
5739 9833 6.534634 ACATAAGGAAAACACTAAGCAGTCT 58.465 36.000 0.00 0.00 30.46 3.24
5740 9834 6.998673 ACATAAGGAAAACACTAAGCAGTCTT 59.001 34.615 0.00 0.00 36.35 3.01
5741 9835 7.502561 ACATAAGGAAAACACTAAGCAGTCTTT 59.497 33.333 0.00 0.00 33.85 2.52
5742 9836 6.775594 AAGGAAAACACTAAGCAGTCTTTT 57.224 33.333 0.00 0.00 36.10 2.27
5743 9837 6.775594 AGGAAAACACTAAGCAGTCTTTTT 57.224 33.333 0.00 0.00 34.30 1.94
5769 9863 3.067833 GTGGGAGAAACACTAAGCAGTC 58.932 50.000 0.00 0.00 35.98 3.51
5788 9882 7.038659 AGCAGTCTTAGTGTTATGCTTAGAAG 58.961 38.462 0.00 0.00 40.95 2.85
6046 10144 5.885352 TCTGCATAGATGAGTATAGCTCCTC 59.115 44.000 0.00 0.00 43.48 3.71
6047 10145 4.952957 TGCATAGATGAGTATAGCTCCTCC 59.047 45.833 0.00 0.00 43.48 4.30
6048 10146 5.200483 GCATAGATGAGTATAGCTCCTCCT 58.800 45.833 0.00 0.00 43.48 3.69
6139 10237 3.307242 CGGCTGCTGATAACACTTCTTAC 59.693 47.826 1.17 0.00 0.00 2.34
6143 10241 6.708054 GGCTGCTGATAACACTTCTTACATAT 59.292 38.462 0.00 0.00 0.00 1.78
6155 10253 8.512138 ACACTTCTTACATATTAAAACAGTGGC 58.488 33.333 0.00 0.00 33.67 5.01
6156 10254 7.692291 CACTTCTTACATATTAAAACAGTGGCG 59.308 37.037 0.00 0.00 0.00 5.69
6157 10255 6.114221 TCTTACATATTAAAACAGTGGCGC 57.886 37.500 0.00 0.00 0.00 6.53
6158 10256 5.644206 TCTTACATATTAAAACAGTGGCGCA 59.356 36.000 10.83 0.00 0.00 6.09
6159 10257 4.355543 ACATATTAAAACAGTGGCGCAG 57.644 40.909 10.83 0.00 0.00 5.18
6160 10258 3.128589 ACATATTAAAACAGTGGCGCAGG 59.871 43.478 10.83 0.00 0.00 4.85
6177 10275 3.021451 GGCCATACCTACATGTGCC 57.979 57.895 9.11 7.00 36.08 5.01
6178 10276 0.182537 GGCCATACCTACATGTGCCA 59.817 55.000 9.11 0.00 39.81 4.92
6179 10277 1.202927 GGCCATACCTACATGTGCCAT 60.203 52.381 9.11 0.00 39.81 4.40
6180 10278 1.881973 GCCATACCTACATGTGCCATG 59.118 52.381 9.11 12.06 0.00 3.66
6181 10279 2.749466 GCCATACCTACATGTGCCATGT 60.749 50.000 20.03 20.03 36.13 3.21
6182 10280 3.141398 CCATACCTACATGTGCCATGTC 58.859 50.000 19.83 0.00 33.76 3.06
6183 10281 3.141398 CATACCTACATGTGCCATGTCC 58.859 50.000 19.83 0.00 33.76 4.02
6184 10282 1.289160 ACCTACATGTGCCATGTCCT 58.711 50.000 19.83 5.65 33.76 3.85
6185 10283 1.065199 ACCTACATGTGCCATGTCCTG 60.065 52.381 19.83 13.49 33.76 3.86
6186 10284 1.019673 CTACATGTGCCATGTCCTGC 58.980 55.000 19.83 0.00 33.76 4.85
6187 10285 0.620030 TACATGTGCCATGTCCTGCT 59.380 50.000 19.83 2.72 33.76 4.24
6188 10286 0.251474 ACATGTGCCATGTCCTGCTT 60.251 50.000 13.17 0.00 0.00 3.91
6189 10287 0.454600 CATGTGCCATGTCCTGCTTC 59.545 55.000 6.93 0.00 0.00 3.86
6190 10288 1.028330 ATGTGCCATGTCCTGCTTCG 61.028 55.000 0.00 0.00 0.00 3.79
6191 10289 1.375908 GTGCCATGTCCTGCTTCGA 60.376 57.895 0.00 0.00 0.00 3.71
6192 10290 0.745845 GTGCCATGTCCTGCTTCGAT 60.746 55.000 0.00 0.00 0.00 3.59
6193 10291 0.462581 TGCCATGTCCTGCTTCGATC 60.463 55.000 0.00 0.00 0.00 3.69
6194 10292 0.179062 GCCATGTCCTGCTTCGATCT 60.179 55.000 0.00 0.00 0.00 2.75
6195 10293 1.579698 CCATGTCCTGCTTCGATCTG 58.420 55.000 0.00 0.00 0.00 2.90
6196 10294 1.137675 CCATGTCCTGCTTCGATCTGA 59.862 52.381 0.00 0.00 0.00 3.27
6197 10295 2.200067 CATGTCCTGCTTCGATCTGAC 58.800 52.381 0.00 0.00 0.00 3.51
6198 10296 1.256812 TGTCCTGCTTCGATCTGACA 58.743 50.000 0.00 0.00 0.00 3.58
6199 10297 1.618343 TGTCCTGCTTCGATCTGACAA 59.382 47.619 0.00 0.00 0.00 3.18
6200 10298 2.037121 TGTCCTGCTTCGATCTGACAAA 59.963 45.455 0.00 0.00 0.00 2.83
6201 10299 3.067106 GTCCTGCTTCGATCTGACAAAA 58.933 45.455 0.00 0.00 0.00 2.44
6202 10300 3.498397 GTCCTGCTTCGATCTGACAAAAA 59.502 43.478 0.00 0.00 0.00 1.94
6203 10301 3.498397 TCCTGCTTCGATCTGACAAAAAC 59.502 43.478 0.00 0.00 0.00 2.43
6204 10302 3.365364 CCTGCTTCGATCTGACAAAAACC 60.365 47.826 0.00 0.00 0.00 3.27
6205 10303 3.210227 TGCTTCGATCTGACAAAAACCA 58.790 40.909 0.00 0.00 0.00 3.67
6206 10304 3.820467 TGCTTCGATCTGACAAAAACCAT 59.180 39.130 0.00 0.00 0.00 3.55
6207 10305 4.278170 TGCTTCGATCTGACAAAAACCATT 59.722 37.500 0.00 0.00 0.00 3.16
6208 10306 5.221224 TGCTTCGATCTGACAAAAACCATTT 60.221 36.000 0.00 0.00 0.00 2.32
6209 10307 5.117592 GCTTCGATCTGACAAAAACCATTTG 59.882 40.000 0.00 0.00 35.64 2.32
6210 10308 4.545610 TCGATCTGACAAAAACCATTTGC 58.454 39.130 1.08 0.00 32.93 3.68
6211 10309 4.037327 TCGATCTGACAAAAACCATTTGCA 59.963 37.500 1.08 0.00 32.93 4.08
6212 10310 4.148696 CGATCTGACAAAAACCATTTGCAC 59.851 41.667 0.00 0.00 32.93 4.57
6213 10311 3.443037 TCTGACAAAAACCATTTGCACG 58.557 40.909 0.00 0.00 32.93 5.34
6214 10312 2.539274 CTGACAAAAACCATTTGCACGG 59.461 45.455 0.00 0.00 32.93 4.94
6215 10313 1.864082 GACAAAAACCATTTGCACGGG 59.136 47.619 0.00 0.00 32.93 5.28
6216 10314 1.208293 ACAAAAACCATTTGCACGGGT 59.792 42.857 0.00 0.00 36.19 5.28
6217 10315 2.431057 ACAAAAACCATTTGCACGGGTA 59.569 40.909 3.74 0.00 33.71 3.69
6218 10316 3.070302 ACAAAAACCATTTGCACGGGTAT 59.930 39.130 3.74 0.00 33.71 2.73
6219 10317 3.586100 AAAACCATTTGCACGGGTATC 57.414 42.857 3.74 0.00 33.71 2.24
6220 10318 2.208132 AACCATTTGCACGGGTATCA 57.792 45.000 3.74 0.00 33.71 2.15
6221 10319 2.208132 ACCATTTGCACGGGTATCAA 57.792 45.000 1.43 0.00 31.89 2.57
6222 10320 2.733956 ACCATTTGCACGGGTATCAAT 58.266 42.857 1.43 0.00 31.89 2.57
6223 10321 3.892284 ACCATTTGCACGGGTATCAATA 58.108 40.909 1.43 0.00 31.89 1.90
6224 10322 3.630312 ACCATTTGCACGGGTATCAATAC 59.370 43.478 1.43 0.00 31.89 1.89
6225 10323 3.303725 CCATTTGCACGGGTATCAATACG 60.304 47.826 0.00 0.00 34.11 3.06
6226 10324 2.676632 TTGCACGGGTATCAATACGT 57.323 45.000 0.00 0.00 40.60 3.57
6227 10325 2.676632 TGCACGGGTATCAATACGTT 57.323 45.000 0.00 0.00 37.48 3.99
6228 10326 2.272678 TGCACGGGTATCAATACGTTG 58.727 47.619 0.00 0.00 37.48 4.10
6237 10335 1.374560 TCAATACGTTGATTGGGCGG 58.625 50.000 10.39 0.00 39.36 6.13
6238 10336 1.091537 CAATACGTTGATTGGGCGGT 58.908 50.000 0.00 0.00 37.53 5.68
6239 10337 1.470890 CAATACGTTGATTGGGCGGTT 59.529 47.619 0.00 0.00 37.53 4.44
6240 10338 1.375551 ATACGTTGATTGGGCGGTTC 58.624 50.000 0.00 0.00 0.00 3.62
6241 10339 0.322322 TACGTTGATTGGGCGGTTCT 59.678 50.000 0.00 0.00 0.00 3.01
6242 10340 1.234615 ACGTTGATTGGGCGGTTCTG 61.235 55.000 0.00 0.00 0.00 3.02
6243 10341 1.883021 GTTGATTGGGCGGTTCTGG 59.117 57.895 0.00 0.00 0.00 3.86
6244 10342 0.893727 GTTGATTGGGCGGTTCTGGT 60.894 55.000 0.00 0.00 0.00 4.00
6245 10343 0.893270 TTGATTGGGCGGTTCTGGTG 60.893 55.000 0.00 0.00 0.00 4.17
6246 10344 2.035626 ATTGGGCGGTTCTGGTGG 59.964 61.111 0.00 0.00 0.00 4.61
6247 10345 2.478335 GATTGGGCGGTTCTGGTGGA 62.478 60.000 0.00 0.00 0.00 4.02
6248 10346 2.484287 ATTGGGCGGTTCTGGTGGAG 62.484 60.000 0.00 0.00 0.00 3.86
6249 10347 3.637273 GGGCGGTTCTGGTGGAGT 61.637 66.667 0.00 0.00 0.00 3.85
6250 10348 2.047179 GGCGGTTCTGGTGGAGTC 60.047 66.667 0.00 0.00 0.00 3.36
6251 10349 2.741092 GCGGTTCTGGTGGAGTCA 59.259 61.111 0.00 0.00 0.00 3.41
6252 10350 1.374758 GCGGTTCTGGTGGAGTCAG 60.375 63.158 0.00 0.00 0.00 3.51
6253 10351 1.374758 CGGTTCTGGTGGAGTCAGC 60.375 63.158 0.00 0.00 41.42 4.26
6258 10356 3.471620 TGGTGGAGTCAGCAGGAC 58.528 61.111 0.61 0.61 45.21 3.85
6269 10367 4.370364 GTCAGCAGGACAAAGAAAACAA 57.630 40.909 3.89 0.00 46.19 2.83
6270 10368 4.354587 GTCAGCAGGACAAAGAAAACAAG 58.645 43.478 3.89 0.00 46.19 3.16
6271 10369 4.096382 GTCAGCAGGACAAAGAAAACAAGA 59.904 41.667 3.89 0.00 46.19 3.02
6272 10370 4.889409 TCAGCAGGACAAAGAAAACAAGAT 59.111 37.500 0.00 0.00 0.00 2.40
6273 10371 4.980434 CAGCAGGACAAAGAAAACAAGATG 59.020 41.667 0.00 0.00 0.00 2.90
6274 10372 3.737774 GCAGGACAAAGAAAACAAGATGC 59.262 43.478 0.00 0.00 0.00 3.91
6275 10373 4.737352 GCAGGACAAAGAAAACAAGATGCA 60.737 41.667 0.00 0.00 0.00 3.96
6276 10374 5.535333 CAGGACAAAGAAAACAAGATGCAT 58.465 37.500 0.00 0.00 0.00 3.96
6277 10375 5.987347 CAGGACAAAGAAAACAAGATGCATT 59.013 36.000 0.00 0.00 0.00 3.56
6278 10376 5.987347 AGGACAAAGAAAACAAGATGCATTG 59.013 36.000 0.00 0.00 36.22 2.82
6279 10377 5.178067 GGACAAAGAAAACAAGATGCATTGG 59.822 40.000 0.00 0.00 34.36 3.16
6280 10378 5.916318 ACAAAGAAAACAAGATGCATTGGA 58.084 33.333 0.00 0.00 34.36 3.53
6281 10379 6.527423 ACAAAGAAAACAAGATGCATTGGAT 58.473 32.000 0.00 0.00 34.36 3.41
6282 10380 6.647895 ACAAAGAAAACAAGATGCATTGGATC 59.352 34.615 9.93 9.93 34.36 3.36
6283 10381 5.988310 AGAAAACAAGATGCATTGGATCA 57.012 34.783 18.79 0.00 34.36 2.92
6284 10382 5.962433 AGAAAACAAGATGCATTGGATCAG 58.038 37.500 18.79 13.18 34.36 2.90
6285 10383 3.795623 AACAAGATGCATTGGATCAGC 57.204 42.857 18.79 0.00 34.36 4.26
6286 10384 3.014304 ACAAGATGCATTGGATCAGCT 57.986 42.857 18.79 1.99 34.36 4.24
6287 10385 2.688446 ACAAGATGCATTGGATCAGCTG 59.312 45.455 18.79 7.63 34.36 4.24
6288 10386 1.982660 AGATGCATTGGATCAGCTGG 58.017 50.000 18.79 0.00 0.00 4.85
6289 10387 0.959553 GATGCATTGGATCAGCTGGG 59.040 55.000 15.13 0.00 0.00 4.45
6290 10388 0.554305 ATGCATTGGATCAGCTGGGA 59.446 50.000 15.13 0.00 0.00 4.37
6291 10389 0.332293 TGCATTGGATCAGCTGGGAA 59.668 50.000 15.13 2.02 0.00 3.97
6292 10390 1.272592 TGCATTGGATCAGCTGGGAAA 60.273 47.619 15.13 4.24 0.00 3.13
6293 10391 1.826720 GCATTGGATCAGCTGGGAAAA 59.173 47.619 15.13 4.61 0.00 2.29
6294 10392 2.234414 GCATTGGATCAGCTGGGAAAAA 59.766 45.455 15.13 3.14 0.00 1.94
6295 10393 3.853475 CATTGGATCAGCTGGGAAAAAC 58.147 45.455 15.13 0.00 0.00 2.43
6296 10394 2.978156 TGGATCAGCTGGGAAAAACT 57.022 45.000 15.13 0.00 0.00 2.66
6297 10395 3.243359 TGGATCAGCTGGGAAAAACTT 57.757 42.857 15.13 0.00 0.00 2.66
6298 10396 4.380843 TGGATCAGCTGGGAAAAACTTA 57.619 40.909 15.13 0.00 0.00 2.24
6299 10397 4.934356 TGGATCAGCTGGGAAAAACTTAT 58.066 39.130 15.13 0.00 0.00 1.73
6300 10398 4.949856 TGGATCAGCTGGGAAAAACTTATC 59.050 41.667 15.13 5.06 0.00 1.75
6301 10399 4.339530 GGATCAGCTGGGAAAAACTTATCC 59.660 45.833 15.13 10.67 34.85 2.59
6302 10400 4.380843 TCAGCTGGGAAAAACTTATCCA 57.619 40.909 15.13 0.00 37.46 3.41
6303 10401 4.735369 TCAGCTGGGAAAAACTTATCCAA 58.265 39.130 15.13 0.00 37.46 3.53
6304 10402 5.144100 TCAGCTGGGAAAAACTTATCCAAA 58.856 37.500 15.13 0.00 37.46 3.28
6305 10403 5.600484 TCAGCTGGGAAAAACTTATCCAAAA 59.400 36.000 15.13 0.00 37.46 2.44
6306 10404 5.696270 CAGCTGGGAAAAACTTATCCAAAAC 59.304 40.000 5.57 0.00 37.46 2.43
6307 10405 5.602561 AGCTGGGAAAAACTTATCCAAAACT 59.397 36.000 0.00 0.00 37.46 2.66
6308 10406 5.696270 GCTGGGAAAAACTTATCCAAAACTG 59.304 40.000 0.00 0.00 37.46 3.16
6309 10407 6.462347 GCTGGGAAAAACTTATCCAAAACTGA 60.462 38.462 0.00 0.00 37.46 3.41
6310 10408 7.425224 TGGGAAAAACTTATCCAAAACTGAA 57.575 32.000 0.00 0.00 37.46 3.02
6311 10409 7.852263 TGGGAAAAACTTATCCAAAACTGAAA 58.148 30.769 0.00 0.00 37.46 2.69
6312 10410 8.322091 TGGGAAAAACTTATCCAAAACTGAAAA 58.678 29.630 0.00 0.00 37.46 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 9.453572 TGCTATCTTGAATGAGTGAAATTAGTT 57.546 29.630 0.00 0.00 0.00 2.24
69 70 9.453572 TTGCTATCTTGAATGAGTGAAATTAGT 57.546 29.630 0.00 0.00 0.00 2.24
74 75 9.630098 GAAATTTGCTATCTTGAATGAGTGAAA 57.370 29.630 0.00 0.00 0.00 2.69
75 76 8.795513 TGAAATTTGCTATCTTGAATGAGTGAA 58.204 29.630 0.00 0.00 0.00 3.18
76 77 8.239314 GTGAAATTTGCTATCTTGAATGAGTGA 58.761 33.333 0.00 0.00 0.00 3.41
77 78 8.242053 AGTGAAATTTGCTATCTTGAATGAGTG 58.758 33.333 0.00 0.00 0.00 3.51
78 79 8.345724 AGTGAAATTTGCTATCTTGAATGAGT 57.654 30.769 0.00 0.00 0.00 3.41
79 80 8.456471 TGAGTGAAATTTGCTATCTTGAATGAG 58.544 33.333 0.00 0.00 0.00 2.90
80 81 8.239314 GTGAGTGAAATTTGCTATCTTGAATGA 58.761 33.333 0.00 0.00 0.00 2.57
81 82 7.487189 GGTGAGTGAAATTTGCTATCTTGAATG 59.513 37.037 0.00 0.00 0.00 2.67
82 83 7.542025 GGTGAGTGAAATTTGCTATCTTGAAT 58.458 34.615 0.00 0.00 0.00 2.57
83 84 6.348458 CGGTGAGTGAAATTTGCTATCTTGAA 60.348 38.462 0.00 0.00 0.00 2.69
84 85 5.122239 CGGTGAGTGAAATTTGCTATCTTGA 59.878 40.000 0.00 0.00 0.00 3.02
85 86 5.122239 TCGGTGAGTGAAATTTGCTATCTTG 59.878 40.000 0.00 0.00 0.00 3.02
86 87 5.245531 TCGGTGAGTGAAATTTGCTATCTT 58.754 37.500 0.00 0.00 0.00 2.40
87 88 4.832248 TCGGTGAGTGAAATTTGCTATCT 58.168 39.130 0.00 0.00 0.00 1.98
88 89 5.545658 TTCGGTGAGTGAAATTTGCTATC 57.454 39.130 0.00 0.00 0.00 2.08
89 90 5.957842 TTTCGGTGAGTGAAATTTGCTAT 57.042 34.783 0.00 0.00 30.75 2.97
90 91 5.759506 TTTTCGGTGAGTGAAATTTGCTA 57.240 34.783 0.00 0.00 35.43 3.49
91 92 4.647424 TTTTCGGTGAGTGAAATTTGCT 57.353 36.364 0.00 0.00 35.43 3.91
155 156 6.687081 TTGAGAAGAGCGGACTTTTAAAAA 57.313 33.333 1.66 0.00 0.00 1.94
156 157 6.687081 TTTGAGAAGAGCGGACTTTTAAAA 57.313 33.333 0.00 0.00 0.00 1.52
157 158 6.540914 TCTTTTGAGAAGAGCGGACTTTTAAA 59.459 34.615 0.00 0.00 0.00 1.52
158 159 6.018180 GTCTTTTGAGAAGAGCGGACTTTTAA 60.018 38.462 0.00 0.00 0.00 1.52
159 160 5.465724 GTCTTTTGAGAAGAGCGGACTTTTA 59.534 40.000 0.00 0.00 0.00 1.52
160 161 4.273724 GTCTTTTGAGAAGAGCGGACTTTT 59.726 41.667 0.00 0.00 0.00 2.27
161 162 3.810386 GTCTTTTGAGAAGAGCGGACTTT 59.190 43.478 0.00 0.00 0.00 2.66
162 163 3.394719 GTCTTTTGAGAAGAGCGGACTT 58.605 45.455 0.00 0.00 0.00 3.01
163 164 2.289133 GGTCTTTTGAGAAGAGCGGACT 60.289 50.000 0.00 0.00 35.45 3.85
164 165 2.070028 GGTCTTTTGAGAAGAGCGGAC 58.930 52.381 0.00 0.00 35.45 4.79
165 166 2.457366 GGTCTTTTGAGAAGAGCGGA 57.543 50.000 0.00 0.00 35.45 5.54
168 169 4.693095 AGAAATCGGTCTTTTGAGAAGAGC 59.307 41.667 4.99 4.99 40.35 4.09
169 170 6.162777 AGAGAAATCGGTCTTTTGAGAAGAG 58.837 40.000 0.00 0.00 0.00 2.85
170 171 6.102897 AGAGAAATCGGTCTTTTGAGAAGA 57.897 37.500 0.00 0.00 0.00 2.87
171 172 7.891183 TTAGAGAAATCGGTCTTTTGAGAAG 57.109 36.000 0.00 0.00 0.00 2.85
172 173 7.713507 TGTTTAGAGAAATCGGTCTTTTGAGAA 59.286 33.333 0.00 0.00 0.00 2.87
173 174 7.214381 TGTTTAGAGAAATCGGTCTTTTGAGA 58.786 34.615 0.00 0.00 0.00 3.27
174 175 7.421530 TGTTTAGAGAAATCGGTCTTTTGAG 57.578 36.000 0.00 0.00 0.00 3.02
175 176 7.795482 TTGTTTAGAGAAATCGGTCTTTTGA 57.205 32.000 0.00 0.00 0.00 2.69
176 177 7.913297 TGTTTGTTTAGAGAAATCGGTCTTTTG 59.087 33.333 0.00 0.00 0.00 2.44
177 178 7.992008 TGTTTGTTTAGAGAAATCGGTCTTTT 58.008 30.769 0.00 0.00 0.00 2.27
178 179 7.562454 TGTTTGTTTAGAGAAATCGGTCTTT 57.438 32.000 0.00 0.00 0.00 2.52
179 180 7.562454 TTGTTTGTTTAGAGAAATCGGTCTT 57.438 32.000 0.00 0.00 0.00 3.01
180 181 7.562454 TTTGTTTGTTTAGAGAAATCGGTCT 57.438 32.000 0.00 0.00 0.00 3.85
181 182 8.126700 TCTTTTGTTTGTTTAGAGAAATCGGTC 58.873 33.333 0.00 0.00 0.00 4.79
182 183 7.992008 TCTTTTGTTTGTTTAGAGAAATCGGT 58.008 30.769 0.00 0.00 0.00 4.69
183 184 9.463443 AATCTTTTGTTTGTTTAGAGAAATCGG 57.537 29.630 0.00 0.00 0.00 4.18
212 213 7.644986 TCTTTTGTTTCTTTCGCAAAAAGAA 57.355 28.000 16.15 16.15 42.53 2.52
213 214 7.826260 ATCTTTTGTTTCTTTCGCAAAAAGA 57.174 28.000 9.93 9.93 40.23 2.52
214 215 8.167985 TGAATCTTTTGTTTCTTTCGCAAAAAG 58.832 29.630 0.00 2.83 40.23 2.27
215 216 7.954786 GTGAATCTTTTGTTTCTTTCGCAAAAA 59.045 29.630 0.00 0.00 40.23 1.94
216 217 7.330700 AGTGAATCTTTTGTTTCTTTCGCAAAA 59.669 29.630 0.00 0.00 39.03 2.44
217 218 6.811170 AGTGAATCTTTTGTTTCTTTCGCAAA 59.189 30.769 0.00 0.00 0.00 3.68
218 219 6.329496 AGTGAATCTTTTGTTTCTTTCGCAA 58.671 32.000 0.00 0.00 0.00 4.85
219 220 5.890334 AGTGAATCTTTTGTTTCTTTCGCA 58.110 33.333 0.00 0.00 0.00 5.10
220 221 6.812481 AAGTGAATCTTTTGTTTCTTTCGC 57.188 33.333 0.00 0.00 31.57 4.70
347 348 9.565090 CAGAGGGAGTATATTTGAAATGAATGA 57.435 33.333 0.00 0.00 0.00 2.57
348 349 9.347240 ACAGAGGGAGTATATTTGAAATGAATG 57.653 33.333 0.00 0.00 0.00 2.67
349 350 9.927081 AACAGAGGGAGTATATTTGAAATGAAT 57.073 29.630 0.00 0.00 0.00 2.57
350 351 9.396022 GAACAGAGGGAGTATATTTGAAATGAA 57.604 33.333 0.00 0.00 0.00 2.57
351 352 7.993183 GGAACAGAGGGAGTATATTTGAAATGA 59.007 37.037 0.00 0.00 0.00 2.57
352 353 7.995488 AGGAACAGAGGGAGTATATTTGAAATG 59.005 37.037 0.00 0.00 0.00 2.32
353 354 8.107196 AGGAACAGAGGGAGTATATTTGAAAT 57.893 34.615 0.00 0.00 0.00 2.17
354 355 7.510675 AGGAACAGAGGGAGTATATTTGAAA 57.489 36.000 0.00 0.00 0.00 2.69
355 356 8.618240 TTAGGAACAGAGGGAGTATATTTGAA 57.382 34.615 0.00 0.00 0.00 2.69
356 357 8.618240 TTTAGGAACAGAGGGAGTATATTTGA 57.382 34.615 0.00 0.00 0.00 2.69
362 363 9.900112 ACTTATATTTAGGAACAGAGGGAGTAT 57.100 33.333 0.00 0.00 0.00 2.12
364 365 9.900112 ATACTTATATTTAGGAACAGAGGGAGT 57.100 33.333 0.00 0.00 0.00 3.85
389 390 9.840427 CGTAGTCCATTTGAAATTTCTAACAAT 57.160 29.630 18.64 9.04 0.00 2.71
390 391 9.058174 TCGTAGTCCATTTGAAATTTCTAACAA 57.942 29.630 18.64 3.04 0.00 2.83
391 392 8.500773 GTCGTAGTCCATTTGAAATTTCTAACA 58.499 33.333 18.64 3.65 0.00 2.41
392 393 8.500773 TGTCGTAGTCCATTTGAAATTTCTAAC 58.499 33.333 18.64 6.86 0.00 2.34
393 394 8.610248 TGTCGTAGTCCATTTGAAATTTCTAA 57.390 30.769 18.64 17.10 0.00 2.10
394 395 8.786826 ATGTCGTAGTCCATTTGAAATTTCTA 57.213 30.769 18.64 8.95 0.00 2.10
395 396 7.687941 ATGTCGTAGTCCATTTGAAATTTCT 57.312 32.000 18.64 0.00 0.00 2.52
396 397 7.634817 CGTATGTCGTAGTCCATTTGAAATTTC 59.365 37.037 11.41 11.41 34.52 2.17
397 398 7.332430 TCGTATGTCGTAGTCCATTTGAAATTT 59.668 33.333 0.00 0.00 40.80 1.82
398 399 6.814644 TCGTATGTCGTAGTCCATTTGAAATT 59.185 34.615 0.00 0.00 40.80 1.82
399 400 6.334989 TCGTATGTCGTAGTCCATTTGAAAT 58.665 36.000 0.00 0.00 40.80 2.17
400 401 5.712004 TCGTATGTCGTAGTCCATTTGAAA 58.288 37.500 0.00 0.00 40.80 2.69
401 402 5.313520 TCGTATGTCGTAGTCCATTTGAA 57.686 39.130 0.00 0.00 40.80 2.69
402 403 4.968812 TCGTATGTCGTAGTCCATTTGA 57.031 40.909 0.00 0.00 40.80 2.69
403 404 5.518847 ACATTCGTATGTCGTAGTCCATTTG 59.481 40.000 1.31 0.00 41.07 2.32
404 405 5.657474 ACATTCGTATGTCGTAGTCCATTT 58.343 37.500 1.31 0.00 41.07 2.32
405 406 5.258456 ACATTCGTATGTCGTAGTCCATT 57.742 39.130 1.31 0.00 41.07 3.16
406 407 4.913335 ACATTCGTATGTCGTAGTCCAT 57.087 40.909 1.31 0.00 41.07 3.41
407 408 7.361457 CCATATACATTCGTATGTCGTAGTCCA 60.361 40.741 11.21 0.00 43.81 4.02
408 409 6.965500 CCATATACATTCGTATGTCGTAGTCC 59.035 42.308 11.21 0.00 43.81 3.85
409 410 7.691463 GTCCATATACATTCGTATGTCGTAGTC 59.309 40.741 11.21 0.00 43.81 2.59
410 411 7.173735 TGTCCATATACATTCGTATGTCGTAGT 59.826 37.037 11.21 0.00 43.81 2.73
411 412 7.524065 TGTCCATATACATTCGTATGTCGTAG 58.476 38.462 11.21 1.51 43.81 3.51
412 413 7.437793 TGTCCATATACATTCGTATGTCGTA 57.562 36.000 11.21 6.77 43.81 3.43
413 414 6.321848 TGTCCATATACATTCGTATGTCGT 57.678 37.500 11.21 4.80 43.81 4.34
414 415 9.516314 AATATGTCCATATACATTCGTATGTCG 57.484 33.333 11.21 0.00 43.81 4.35
441 442 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
442 443 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
443 444 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
444 445 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
445 446 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
446 447 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
447 448 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
448 449 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
449 450 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
450 451 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
451 452 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
452 453 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
453 454 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
454 455 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
455 456 6.258727 AGACTACATACGGAGCAAAATGAATG 59.741 38.462 0.00 0.00 0.00 2.67
456 457 6.349300 AGACTACATACGGAGCAAAATGAAT 58.651 36.000 0.00 0.00 0.00 2.57
457 458 5.730550 AGACTACATACGGAGCAAAATGAA 58.269 37.500 0.00 0.00 0.00 2.57
458 459 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
459 460 6.422776 AAAGACTACATACGGAGCAAAATG 57.577 37.500 0.00 0.00 0.00 2.32
460 461 6.430000 ACAAAAGACTACATACGGAGCAAAAT 59.570 34.615 0.00 0.00 0.00 1.82
461 462 5.761234 ACAAAAGACTACATACGGAGCAAAA 59.239 36.000 0.00 0.00 0.00 2.44
462 463 5.302360 ACAAAAGACTACATACGGAGCAAA 58.698 37.500 0.00 0.00 0.00 3.68
463 464 4.890088 ACAAAAGACTACATACGGAGCAA 58.110 39.130 0.00 0.00 0.00 3.91
464 465 4.530710 ACAAAAGACTACATACGGAGCA 57.469 40.909 0.00 0.00 0.00 4.26
465 466 4.092968 CCAACAAAAGACTACATACGGAGC 59.907 45.833 0.00 0.00 0.00 4.70
466 467 5.475719 TCCAACAAAAGACTACATACGGAG 58.524 41.667 0.00 0.00 0.00 4.63
467 468 5.471556 TCCAACAAAAGACTACATACGGA 57.528 39.130 0.00 0.00 0.00 4.69
468 469 6.594159 AGATTCCAACAAAAGACTACATACGG 59.406 38.462 0.00 0.00 0.00 4.02
469 470 7.545965 AGAGATTCCAACAAAAGACTACATACG 59.454 37.037 0.00 0.00 0.00 3.06
470 471 8.779354 AGAGATTCCAACAAAAGACTACATAC 57.221 34.615 0.00 0.00 0.00 2.39
498 499 8.871125 TCTCTCTGTTCCTAAATGTAAGTCTTT 58.129 33.333 0.00 0.00 0.00 2.52
499 500 8.423906 TCTCTCTGTTCCTAAATGTAAGTCTT 57.576 34.615 0.00 0.00 0.00 3.01
500 501 7.672239 ACTCTCTCTGTTCCTAAATGTAAGTCT 59.328 37.037 0.00 0.00 0.00 3.24
501 502 7.832769 ACTCTCTCTGTTCCTAAATGTAAGTC 58.167 38.462 0.00 0.00 0.00 3.01
502 503 7.784470 ACTCTCTCTGTTCCTAAATGTAAGT 57.216 36.000 0.00 0.00 0.00 2.24
503 504 8.740906 TGTACTCTCTCTGTTCCTAAATGTAAG 58.259 37.037 0.00 0.00 0.00 2.34
504 505 8.645814 TGTACTCTCTCTGTTCCTAAATGTAA 57.354 34.615 0.00 0.00 0.00 2.41
505 506 8.824756 ATGTACTCTCTCTGTTCCTAAATGTA 57.175 34.615 0.00 0.00 0.00 2.29
506 507 7.726033 ATGTACTCTCTCTGTTCCTAAATGT 57.274 36.000 0.00 0.00 0.00 2.71
512 513 9.482175 AGTAAAATATGTACTCTCTCTGTTCCT 57.518 33.333 0.00 0.00 0.00 3.36
536 537 9.045223 GGCTGAAATCAACTTTTTGAAATTAGT 57.955 29.630 0.00 0.00 45.01 2.24
537 538 9.044150 TGGCTGAAATCAACTTTTTGAAATTAG 57.956 29.630 0.00 0.00 45.01 1.73
538 539 8.954950 TGGCTGAAATCAACTTTTTGAAATTA 57.045 26.923 0.00 0.00 45.01 1.40
539 540 7.862512 TGGCTGAAATCAACTTTTTGAAATT 57.137 28.000 0.00 0.00 45.01 1.82
540 541 8.454570 AATGGCTGAAATCAACTTTTTGAAAT 57.545 26.923 0.00 0.00 45.01 2.17
541 542 7.862512 AATGGCTGAAATCAACTTTTTGAAA 57.137 28.000 0.00 0.00 45.01 2.69
542 543 7.862512 AAATGGCTGAAATCAACTTTTTGAA 57.137 28.000 0.00 0.00 45.01 2.69
543 544 7.862512 AAAATGGCTGAAATCAACTTTTTGA 57.137 28.000 8.94 0.00 45.93 2.69
669 672 1.293498 GTGTCCTGTGGAGCACGAT 59.707 57.895 0.00 0.00 37.14 3.73
670 673 1.471829 ATGTGTCCTGTGGAGCACGA 61.472 55.000 0.00 5.30 36.92 4.35
671 674 1.004560 ATGTGTCCTGTGGAGCACG 60.005 57.895 11.58 0.00 36.92 5.34
672 675 0.035317 TCATGTGTCCTGTGGAGCAC 59.965 55.000 0.00 10.29 35.70 4.40
673 676 0.035317 GTCATGTGTCCTGTGGAGCA 59.965 55.000 0.00 0.00 29.39 4.26
674 677 1.016130 CGTCATGTGTCCTGTGGAGC 61.016 60.000 0.00 0.00 29.39 4.70
676 679 0.830023 TCCGTCATGTGTCCTGTGGA 60.830 55.000 0.00 0.00 0.00 4.02
678 681 2.002586 GAATCCGTCATGTGTCCTGTG 58.997 52.381 0.00 0.00 0.00 3.66
679 682 1.404181 CGAATCCGTCATGTGTCCTGT 60.404 52.381 0.00 0.00 0.00 4.00
680 683 1.280982 CGAATCCGTCATGTGTCCTG 58.719 55.000 0.00 0.00 0.00 3.86
681 684 3.741029 CGAATCCGTCATGTGTCCT 57.259 52.632 0.00 0.00 0.00 3.85
742 745 5.186198 ACCGTTAGATCAGAAATGAAAGGG 58.814 41.667 0.00 0.00 0.00 3.95
903 907 2.564458 CGGTGTCGTGGATGTCGA 59.436 61.111 0.00 0.00 34.91 4.20
949 999 3.385384 CTGCCCTGAGCTGACGGA 61.385 66.667 0.00 0.00 42.76 4.69
1182 1235 2.520536 GCGGGCATGATAGAGGGGT 61.521 63.158 0.00 0.00 0.00 4.95
1198 1252 2.156446 GTGGTGACGGTATGACGCG 61.156 63.158 3.53 3.53 37.37 6.01
1237 1291 4.244802 ACAACAAACGGGCGCACG 62.245 61.111 33.55 33.55 40.31 5.34
1243 1297 2.926159 GCATTGATCCACAACAAACGGG 60.926 50.000 0.00 0.00 41.52 5.28
1271 1332 2.400467 ACCTGAACCCACTACAGTCT 57.600 50.000 0.00 0.00 0.00 3.24
1272 1333 2.367567 TGAACCTGAACCCACTACAGTC 59.632 50.000 0.00 0.00 0.00 3.51
1273 1334 2.368875 CTGAACCTGAACCCACTACAGT 59.631 50.000 0.00 0.00 0.00 3.55
1274 1335 2.368875 ACTGAACCTGAACCCACTACAG 59.631 50.000 0.00 0.00 0.00 2.74
1275 1336 2.104111 CACTGAACCTGAACCCACTACA 59.896 50.000 0.00 0.00 0.00 2.74
1276 1337 2.104281 ACACTGAACCTGAACCCACTAC 59.896 50.000 0.00 0.00 0.00 2.73
1277 1338 2.104111 CACACTGAACCTGAACCCACTA 59.896 50.000 0.00 0.00 0.00 2.74
1318 1379 4.042187 AGCAACACCCTTGTTTCTCTAGAT 59.958 41.667 0.00 0.00 43.89 1.98
1439 1509 8.798748 AGTGACAACGATATAATACTTAGCAC 57.201 34.615 0.00 0.00 0.00 4.40
1457 1533 2.967599 ATCGCTCTGCATAGTGACAA 57.032 45.000 16.57 0.00 38.74 3.18
1467 1544 4.726416 TGAGAAAAATCAAATCGCTCTGC 58.274 39.130 0.00 0.00 0.00 4.26
1469 1546 6.327934 CCAATGAGAAAAATCAAATCGCTCT 58.672 36.000 0.00 0.00 31.76 4.09
1676 1761 2.703798 CGGCTTGCCCAGGTTCATG 61.704 63.158 6.02 0.00 0.00 3.07
1778 1864 4.627467 CCCACAGAGAGAACGAATAAACTG 59.373 45.833 0.00 0.00 0.00 3.16
1928 2017 3.504906 CCTTCTTGCATTCTTCTTCTGCA 59.495 43.478 0.00 0.00 43.69 4.41
1968 2061 4.830046 ACATTGGCTGGTATTAACACAACA 59.170 37.500 0.00 0.00 0.00 3.33
2007 2101 4.701651 TGGGAACTAAACATGCATCTCAAG 59.298 41.667 0.00 0.00 0.00 3.02
2078 2204 1.068055 GCAGCAGAACCCAACATCAAG 60.068 52.381 0.00 0.00 0.00 3.02
2361 2503 4.929479 ACACTTGGGCAGGATAATTGTTA 58.071 39.130 0.00 0.00 0.00 2.41
2454 2596 7.101054 ACAATGTTATGAATTCAGCAGCAATT 58.899 30.769 14.54 6.24 0.00 2.32
2592 2737 4.062293 TGTAGTGTGTCATTTACTGTGGC 58.938 43.478 0.00 0.00 0.00 5.01
2614 2759 7.393515 ACTTGTTGAAAAAGAGGTCAAGTAGTT 59.606 33.333 1.38 0.00 40.98 2.24
2775 2922 4.504461 CGAGCCATATTGAACTGTGTAGAC 59.496 45.833 0.00 0.00 0.00 2.59
2776 2923 4.159693 ACGAGCCATATTGAACTGTGTAGA 59.840 41.667 0.00 0.00 0.00 2.59
2777 2924 4.433615 ACGAGCCATATTGAACTGTGTAG 58.566 43.478 0.00 0.00 0.00 2.74
2778 2925 4.465632 ACGAGCCATATTGAACTGTGTA 57.534 40.909 0.00 0.00 0.00 2.90
2779 2926 3.334583 ACGAGCCATATTGAACTGTGT 57.665 42.857 0.00 0.00 0.00 3.72
2780 2927 4.271049 CCTAACGAGCCATATTGAACTGTG 59.729 45.833 0.00 0.00 0.00 3.66
2781 2928 4.081087 ACCTAACGAGCCATATTGAACTGT 60.081 41.667 0.00 0.00 0.00 3.55
2796 2943 3.511146 ACCTTCCGTAAATGACCTAACGA 59.489 43.478 0.00 0.00 37.53 3.85
2797 2944 3.615496 CACCTTCCGTAAATGACCTAACG 59.385 47.826 0.00 0.00 35.20 3.18
2901 3130 6.476378 ACCAAAAGAGTAACATCAGCATACT 58.524 36.000 0.00 0.00 32.76 2.12
3094 3323 9.354673 TGAAGTTCTTCATTATCTTGGAACTTT 57.645 29.630 16.36 4.91 46.77 2.66
3457 6544 4.156556 ACATGCTATAGTTTGCACACTTGG 59.843 41.667 11.39 3.36 42.26 3.61
3584 6680 4.618067 TGTACAGCGACAACTAATGTTACG 59.382 41.667 0.00 0.00 44.12 3.18
3614 6710 6.708285 ACAGAGGGAGTATTTCGTAACAAAT 58.292 36.000 0.00 0.00 0.00 2.32
3667 6763 7.958053 ATAAGAGCGTTTTTAACACTACACT 57.042 32.000 0.00 0.00 0.00 3.55
3705 6801 5.681639 ACTATATGCCAAACAGGTACTTCC 58.318 41.667 0.00 0.00 40.61 3.46
3712 6808 3.815401 GCCACTACTATATGCCAAACAGG 59.185 47.826 0.00 0.00 41.84 4.00
3824 7007 3.747854 CTCAAGCAGAGCAGATCCATA 57.252 47.619 0.00 0.00 37.59 2.74
3826 7009 5.942744 GTCTACTCAAGCAGAGCAGATCCA 61.943 50.000 11.02 0.00 45.96 3.41
3852 7035 6.488769 TCATATAGAAAAGCGGAAAGGGTA 57.511 37.500 0.00 0.00 0.00 3.69
3943 7130 2.100252 CCCTTTCATGCTGCTACCAATG 59.900 50.000 0.00 0.00 0.00 2.82
4075 7287 3.023119 ACAACAGAAACACCAATCTGCA 58.977 40.909 2.86 0.00 45.50 4.41
4311 7723 2.894126 ACAAAGTTCAACACCCAACACA 59.106 40.909 0.00 0.00 0.00 3.72
4441 7853 0.452987 CACCGCCCTTTCACATCATG 59.547 55.000 0.00 0.00 0.00 3.07
4456 7875 0.457166 CAAAGCCATGATGCACACCG 60.457 55.000 0.00 0.00 0.00 4.94
4470 7889 5.464168 AGAAAGCACATTGATACACAAAGC 58.536 37.500 0.00 0.00 42.03 3.51
4472 7891 7.978414 TCAAAAGAAAGCACATTGATACACAAA 59.022 29.630 0.00 0.00 42.03 2.83
4473 7892 7.487484 TCAAAAGAAAGCACATTGATACACAA 58.513 30.769 0.00 0.00 42.95 3.33
4476 7895 7.715657 AGTTCAAAAGAAAGCACATTGATACA 58.284 30.769 0.00 0.00 30.81 2.29
4477 7896 8.579682 AAGTTCAAAAGAAAGCACATTGATAC 57.420 30.769 0.00 0.00 30.81 2.24
4479 7898 8.196771 TGTAAGTTCAAAAGAAAGCACATTGAT 58.803 29.630 0.00 0.00 30.81 2.57
4480 7899 7.542890 TGTAAGTTCAAAAGAAAGCACATTGA 58.457 30.769 0.00 0.00 0.00 2.57
4680 8755 0.178903 TGGAGAACCACCCAGCTACT 60.179 55.000 0.00 0.00 41.77 2.57
4877 8952 4.637977 GGAAAAGGCTTAGTCATGGAGAAG 59.362 45.833 0.00 0.00 0.00 2.85
4880 8955 3.282885 GGGAAAAGGCTTAGTCATGGAG 58.717 50.000 0.00 0.00 0.00 3.86
4953 9033 4.592485 ATCGGTGTGGATAGTCTTCATC 57.408 45.455 0.00 0.00 0.00 2.92
5240 9321 3.696051 GGCCATACATCACAACAACATCT 59.304 43.478 0.00 0.00 0.00 2.90
5323 9404 6.243551 CAAGATGTGTTAACAGCATACTTCG 58.756 40.000 8.98 10.72 45.36 3.79
5329 9410 4.074259 TCTGCAAGATGTGTTAACAGCAT 58.926 39.130 15.65 16.81 45.36 3.79
5553 9647 5.772825 ACTGTAACAACAGATGCACAAAT 57.227 34.783 12.23 0.00 39.99 2.32
5638 9732 7.172703 GGGTTTTGAGTACATATTCTTATCCGG 59.827 40.741 0.00 0.00 0.00 5.14
5717 9811 8.465273 AAAAGACTGCTTAGTGTTTTCCTTAT 57.535 30.769 8.83 0.00 39.89 1.73
5742 9836 4.035909 GCTTAGTGTTTCTCCCACGAAAAA 59.964 41.667 0.00 0.00 37.88 1.94
5743 9837 3.562557 GCTTAGTGTTTCTCCCACGAAAA 59.437 43.478 0.00 0.00 37.88 2.29
5744 9838 3.135994 GCTTAGTGTTTCTCCCACGAAA 58.864 45.455 0.00 0.00 37.88 3.46
5745 9839 2.103432 TGCTTAGTGTTTCTCCCACGAA 59.897 45.455 0.00 0.00 37.88 3.85
5746 9840 1.689813 TGCTTAGTGTTTCTCCCACGA 59.310 47.619 0.00 0.00 37.88 4.35
5747 9841 2.069273 CTGCTTAGTGTTTCTCCCACG 58.931 52.381 0.00 0.00 37.88 4.94
5748 9842 3.067833 GACTGCTTAGTGTTTCTCCCAC 58.932 50.000 0.00 0.00 0.00 4.61
5749 9843 2.972713 AGACTGCTTAGTGTTTCTCCCA 59.027 45.455 0.00 0.00 0.00 4.37
5750 9844 3.686916 AGACTGCTTAGTGTTTCTCCC 57.313 47.619 0.00 0.00 0.00 4.30
5769 9863 7.493367 ACTAGCCTTCTAAGCATAACACTAAG 58.507 38.462 0.00 0.00 0.00 2.18
5773 9867 5.524281 GGAACTAGCCTTCTAAGCATAACAC 59.476 44.000 0.00 0.00 0.00 3.32
5775 9869 5.755861 CAGGAACTAGCCTTCTAAGCATAAC 59.244 44.000 0.00 0.00 36.02 1.89
5788 9882 0.678048 CTTGGTGCCAGGAACTAGCC 60.678 60.000 0.00 0.00 44.01 3.93
6046 10144 8.498054 TTTCATGAGCAAATAGACTTTAGAGG 57.502 34.615 0.00 0.00 0.00 3.69
6088 10186 8.349983 GGCAACCGTTTTAAGATGTGAATATAT 58.650 33.333 0.00 0.00 0.00 0.86
6139 10237 3.694734 CCTGCGCCACTGTTTTAATATG 58.305 45.455 4.18 0.00 0.00 1.78
6143 10241 1.657556 GCCTGCGCCACTGTTTTAA 59.342 52.632 4.18 0.00 0.00 1.52
6159 10257 0.182537 TGGCACATGTAGGTATGGCC 59.817 55.000 12.84 12.84 41.14 5.36
6160 10258 3.798794 TGGCACATGTAGGTATGGC 57.201 52.632 0.00 0.00 38.08 4.40
6173 10271 0.745845 ATCGAAGCAGGACATGGCAC 60.746 55.000 0.00 0.00 0.00 5.01
6174 10272 0.462581 GATCGAAGCAGGACATGGCA 60.463 55.000 0.00 0.00 0.00 4.92
6175 10273 0.179062 AGATCGAAGCAGGACATGGC 60.179 55.000 0.00 0.00 0.00 4.40
6176 10274 1.137675 TCAGATCGAAGCAGGACATGG 59.862 52.381 0.00 0.00 0.00 3.66
6177 10275 2.200067 GTCAGATCGAAGCAGGACATG 58.800 52.381 0.00 0.00 0.00 3.21
6178 10276 1.827344 TGTCAGATCGAAGCAGGACAT 59.173 47.619 0.00 0.00 30.99 3.06
6179 10277 1.256812 TGTCAGATCGAAGCAGGACA 58.743 50.000 0.00 0.80 33.31 4.02
6180 10278 2.370281 TTGTCAGATCGAAGCAGGAC 57.630 50.000 0.00 0.00 0.00 3.85
6181 10279 3.401033 TTTTGTCAGATCGAAGCAGGA 57.599 42.857 0.00 0.00 0.00 3.86
6182 10280 3.365364 GGTTTTTGTCAGATCGAAGCAGG 60.365 47.826 0.00 0.00 0.00 4.85
6183 10281 3.250762 TGGTTTTTGTCAGATCGAAGCAG 59.749 43.478 0.00 0.00 0.00 4.24
6184 10282 3.210227 TGGTTTTTGTCAGATCGAAGCA 58.790 40.909 0.00 0.00 0.00 3.91
6185 10283 3.896648 TGGTTTTTGTCAGATCGAAGC 57.103 42.857 0.00 0.00 0.00 3.86
6186 10284 5.117592 GCAAATGGTTTTTGTCAGATCGAAG 59.882 40.000 0.00 0.00 0.00 3.79
6187 10285 4.981674 GCAAATGGTTTTTGTCAGATCGAA 59.018 37.500 0.00 0.00 0.00 3.71
6188 10286 4.037327 TGCAAATGGTTTTTGTCAGATCGA 59.963 37.500 0.00 0.00 0.00 3.59
6189 10287 4.148696 GTGCAAATGGTTTTTGTCAGATCG 59.851 41.667 0.00 0.00 0.00 3.69
6190 10288 4.148696 CGTGCAAATGGTTTTTGTCAGATC 59.851 41.667 0.00 0.00 0.00 2.75
6191 10289 4.050553 CGTGCAAATGGTTTTTGTCAGAT 58.949 39.130 0.00 0.00 0.00 2.90
6192 10290 3.443037 CGTGCAAATGGTTTTTGTCAGA 58.557 40.909 0.00 0.00 0.00 3.27
6193 10291 2.539274 CCGTGCAAATGGTTTTTGTCAG 59.461 45.455 0.00 0.00 0.00 3.51
6194 10292 2.544685 CCGTGCAAATGGTTTTTGTCA 58.455 42.857 0.00 0.00 0.00 3.58
6195 10293 1.864082 CCCGTGCAAATGGTTTTTGTC 59.136 47.619 0.00 0.00 0.00 3.18
6196 10294 1.208293 ACCCGTGCAAATGGTTTTTGT 59.792 42.857 0.00 0.00 0.00 2.83
6197 10295 1.946745 ACCCGTGCAAATGGTTTTTG 58.053 45.000 0.00 0.00 0.00 2.44
6198 10296 3.322254 TGATACCCGTGCAAATGGTTTTT 59.678 39.130 8.21 0.00 33.55 1.94
6199 10297 2.894126 TGATACCCGTGCAAATGGTTTT 59.106 40.909 8.21 0.00 33.55 2.43
6200 10298 2.520069 TGATACCCGTGCAAATGGTTT 58.480 42.857 8.21 1.43 33.55 3.27
6201 10299 2.208132 TGATACCCGTGCAAATGGTT 57.792 45.000 8.21 0.00 33.55 3.67
6202 10300 2.208132 TTGATACCCGTGCAAATGGT 57.792 45.000 8.02 8.02 36.15 3.55
6203 10301 3.303725 CGTATTGATACCCGTGCAAATGG 60.304 47.826 0.00 0.00 0.00 3.16
6204 10302 3.311322 ACGTATTGATACCCGTGCAAATG 59.689 43.478 0.00 0.00 31.43 2.32
6205 10303 3.537580 ACGTATTGATACCCGTGCAAAT 58.462 40.909 0.00 0.00 31.43 2.32
6206 10304 2.975266 ACGTATTGATACCCGTGCAAA 58.025 42.857 0.00 0.00 31.43 3.68
6207 10305 2.673862 CAACGTATTGATACCCGTGCAA 59.326 45.455 0.00 0.00 38.15 4.08
6208 10306 2.094130 TCAACGTATTGATACCCGTGCA 60.094 45.455 0.00 0.00 40.01 4.57
6209 10307 2.542597 TCAACGTATTGATACCCGTGC 58.457 47.619 0.00 0.00 40.01 5.34
6219 10317 1.091537 ACCGCCCAATCAACGTATTG 58.908 50.000 4.37 4.37 36.74 1.90
6220 10318 1.741145 GAACCGCCCAATCAACGTATT 59.259 47.619 0.00 0.00 0.00 1.89
6221 10319 1.065709 AGAACCGCCCAATCAACGTAT 60.066 47.619 0.00 0.00 0.00 3.06
6222 10320 0.322322 AGAACCGCCCAATCAACGTA 59.678 50.000 0.00 0.00 0.00 3.57
6223 10321 1.072505 AGAACCGCCCAATCAACGT 59.927 52.632 0.00 0.00 0.00 3.99
6224 10322 1.501741 CAGAACCGCCCAATCAACG 59.498 57.895 0.00 0.00 0.00 4.10
6225 10323 0.893727 ACCAGAACCGCCCAATCAAC 60.894 55.000 0.00 0.00 0.00 3.18
6226 10324 0.893270 CACCAGAACCGCCCAATCAA 60.893 55.000 0.00 0.00 0.00 2.57
6227 10325 1.303236 CACCAGAACCGCCCAATCA 60.303 57.895 0.00 0.00 0.00 2.57
6228 10326 2.046285 CCACCAGAACCGCCCAATC 61.046 63.158 0.00 0.00 0.00 2.67
6229 10327 2.035626 CCACCAGAACCGCCCAAT 59.964 61.111 0.00 0.00 0.00 3.16
6230 10328 3.172106 TCCACCAGAACCGCCCAA 61.172 61.111 0.00 0.00 0.00 4.12
6231 10329 3.636231 CTCCACCAGAACCGCCCA 61.636 66.667 0.00 0.00 0.00 5.36
6232 10330 3.607370 GACTCCACCAGAACCGCCC 62.607 68.421 0.00 0.00 0.00 6.13
6233 10331 2.047179 GACTCCACCAGAACCGCC 60.047 66.667 0.00 0.00 0.00 6.13
6234 10332 1.374758 CTGACTCCACCAGAACCGC 60.375 63.158 0.00 0.00 33.65 5.68
6235 10333 1.374758 GCTGACTCCACCAGAACCG 60.375 63.158 0.00 0.00 33.65 4.44
6236 10334 0.321122 CTGCTGACTCCACCAGAACC 60.321 60.000 0.00 0.00 33.65 3.62
6237 10335 0.321122 CCTGCTGACTCCACCAGAAC 60.321 60.000 0.00 0.00 33.65 3.01
6238 10336 0.471780 TCCTGCTGACTCCACCAGAA 60.472 55.000 0.00 0.00 33.65 3.02
6239 10337 1.156095 TCCTGCTGACTCCACCAGA 59.844 57.895 0.00 0.00 33.65 3.86
6240 10338 1.294780 GTCCTGCTGACTCCACCAG 59.705 63.158 0.00 0.00 41.03 4.00
6241 10339 1.053835 TTGTCCTGCTGACTCCACCA 61.054 55.000 8.16 0.00 44.75 4.17
6242 10340 0.108585 TTTGTCCTGCTGACTCCACC 59.891 55.000 8.16 0.00 44.75 4.61
6243 10341 1.070758 TCTTTGTCCTGCTGACTCCAC 59.929 52.381 8.16 0.00 44.75 4.02
6244 10342 1.423584 TCTTTGTCCTGCTGACTCCA 58.576 50.000 8.16 0.00 44.75 3.86
6245 10343 2.550830 TTCTTTGTCCTGCTGACTCC 57.449 50.000 8.16 0.00 44.75 3.85
6246 10344 3.627577 TGTTTTCTTTGTCCTGCTGACTC 59.372 43.478 8.16 0.00 44.75 3.36
6247 10345 3.620488 TGTTTTCTTTGTCCTGCTGACT 58.380 40.909 8.16 0.00 44.75 3.41
6248 10346 4.096382 TCTTGTTTTCTTTGTCCTGCTGAC 59.904 41.667 0.00 0.00 44.72 3.51
6249 10347 4.269183 TCTTGTTTTCTTTGTCCTGCTGA 58.731 39.130 0.00 0.00 0.00 4.26
6250 10348 4.637483 TCTTGTTTTCTTTGTCCTGCTG 57.363 40.909 0.00 0.00 0.00 4.41
6251 10349 4.500375 GCATCTTGTTTTCTTTGTCCTGCT 60.500 41.667 0.00 0.00 0.00 4.24
6252 10350 3.737774 GCATCTTGTTTTCTTTGTCCTGC 59.262 43.478 0.00 0.00 0.00 4.85
6253 10351 4.935702 TGCATCTTGTTTTCTTTGTCCTG 58.064 39.130 0.00 0.00 0.00 3.86
6254 10352 5.796424 ATGCATCTTGTTTTCTTTGTCCT 57.204 34.783 0.00 0.00 0.00 3.85
6255 10353 5.178067 CCAATGCATCTTGTTTTCTTTGTCC 59.822 40.000 0.00 0.00 0.00 4.02
6256 10354 5.984926 TCCAATGCATCTTGTTTTCTTTGTC 59.015 36.000 0.00 0.00 0.00 3.18
6257 10355 5.916318 TCCAATGCATCTTGTTTTCTTTGT 58.084 33.333 0.00 0.00 0.00 2.83
6258 10356 6.647481 TGATCCAATGCATCTTGTTTTCTTTG 59.353 34.615 0.00 0.00 0.00 2.77
6259 10357 6.761312 TGATCCAATGCATCTTGTTTTCTTT 58.239 32.000 0.00 0.00 0.00 2.52
6260 10358 6.349243 TGATCCAATGCATCTTGTTTTCTT 57.651 33.333 0.00 0.00 0.00 2.52
6261 10359 5.623824 GCTGATCCAATGCATCTTGTTTTCT 60.624 40.000 0.00 0.00 0.00 2.52
6262 10360 4.565564 GCTGATCCAATGCATCTTGTTTTC 59.434 41.667 0.00 0.00 0.00 2.29
6263 10361 4.222145 AGCTGATCCAATGCATCTTGTTTT 59.778 37.500 0.00 0.00 0.00 2.43
6264 10362 3.767673 AGCTGATCCAATGCATCTTGTTT 59.232 39.130 0.00 0.00 0.00 2.83
6265 10363 3.130516 CAGCTGATCCAATGCATCTTGTT 59.869 43.478 8.42 0.00 0.00 2.83
6266 10364 2.688446 CAGCTGATCCAATGCATCTTGT 59.312 45.455 8.42 0.00 0.00 3.16
6267 10365 2.034685 CCAGCTGATCCAATGCATCTTG 59.965 50.000 17.39 0.00 0.00 3.02
6268 10366 2.307768 CCAGCTGATCCAATGCATCTT 58.692 47.619 17.39 0.00 0.00 2.40
6269 10367 1.478837 CCCAGCTGATCCAATGCATCT 60.479 52.381 17.39 0.00 0.00 2.90
6270 10368 0.959553 CCCAGCTGATCCAATGCATC 59.040 55.000 17.39 0.00 0.00 3.91
6271 10369 0.554305 TCCCAGCTGATCCAATGCAT 59.446 50.000 17.39 0.00 0.00 3.96
6272 10370 0.332293 TTCCCAGCTGATCCAATGCA 59.668 50.000 17.39 0.00 0.00 3.96
6273 10371 1.477553 TTTCCCAGCTGATCCAATGC 58.522 50.000 17.39 0.00 0.00 3.56
6274 10372 3.512724 AGTTTTTCCCAGCTGATCCAATG 59.487 43.478 17.39 0.00 0.00 2.82
6275 10373 3.782992 AGTTTTTCCCAGCTGATCCAAT 58.217 40.909 17.39 0.00 0.00 3.16
6276 10374 3.243359 AGTTTTTCCCAGCTGATCCAA 57.757 42.857 17.39 0.00 0.00 3.53
6277 10375 2.978156 AGTTTTTCCCAGCTGATCCA 57.022 45.000 17.39 0.00 0.00 3.41
6278 10376 4.339530 GGATAAGTTTTTCCCAGCTGATCC 59.660 45.833 17.39 11.44 33.29 3.36
6279 10377 4.949856 TGGATAAGTTTTTCCCAGCTGATC 59.050 41.667 17.39 5.73 0.00 2.92
6280 10378 4.934356 TGGATAAGTTTTTCCCAGCTGAT 58.066 39.130 17.39 0.00 0.00 2.90
6281 10379 4.380843 TGGATAAGTTTTTCCCAGCTGA 57.619 40.909 17.39 0.00 0.00 4.26
6282 10380 5.467035 TTTGGATAAGTTTTTCCCAGCTG 57.533 39.130 6.78 6.78 0.00 4.24
6283 10381 5.602561 AGTTTTGGATAAGTTTTTCCCAGCT 59.397 36.000 2.94 0.00 0.00 4.24
6284 10382 5.696270 CAGTTTTGGATAAGTTTTTCCCAGC 59.304 40.000 2.94 0.00 0.00 4.85
6285 10383 7.049799 TCAGTTTTGGATAAGTTTTTCCCAG 57.950 36.000 2.94 0.00 0.00 4.45
6286 10384 7.425224 TTCAGTTTTGGATAAGTTTTTCCCA 57.575 32.000 2.94 0.00 0.00 4.37
6287 10385 8.725405 TTTTCAGTTTTGGATAAGTTTTTCCC 57.275 30.769 2.94 0.00 0.00 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.