Multiple sequence alignment - TraesCS1B01G078300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G078300 chr1B 100.000 2291 0 0 1 2291 61318764 61321054 0.000000e+00 4231.0
1 TraesCS1B01G078300 chr1B 96.817 974 27 4 414 1384 550680420 550681392 0.000000e+00 1624.0
2 TraesCS1B01G078300 chr6B 96.914 972 27 3 414 1383 412283800 412282830 0.000000e+00 1626.0
3 TraesCS1B01G078300 chr6B 95.992 973 36 3 414 1384 708042981 708042010 0.000000e+00 1578.0
4 TraesCS1B01G078300 chr2B 96.197 973 33 4 414 1383 383360617 383361588 0.000000e+00 1589.0
5 TraesCS1B01G078300 chr1A 94.160 976 51 5 414 1386 373760056 373761028 0.000000e+00 1482.0
6 TraesCS1B01G078300 chr1A 87.243 972 120 4 415 1383 560399571 560400541 0.000000e+00 1105.0
7 TraesCS1B01G078300 chr3A 93.955 976 52 5 414 1383 11778816 11779790 0.000000e+00 1469.0
8 TraesCS1B01G078300 chr2A 93.004 972 62 5 414 1383 671342787 671341820 0.000000e+00 1413.0
9 TraesCS1B01G078300 chr4A 87.243 972 119 4 414 1383 67263147 67262179 0.000000e+00 1103.0
10 TraesCS1B01G078300 chrUn 92.683 738 41 13 1506 2236 456779542 456780273 0.000000e+00 1051.0
11 TraesCS1B01G078300 chr5B 92.105 570 41 4 1683 2250 380217392 380217959 0.000000e+00 800.0
12 TraesCS1B01G078300 chr5B 85.207 169 22 3 1503 1668 380217159 380217327 1.090000e-38 171.0
13 TraesCS1B01G078300 chr5B 96.364 55 2 0 1388 1442 394629984 394629930 8.720000e-15 91.6
14 TraesCS1B01G078300 chr7B 92.366 524 31 8 1683 2204 642833809 642833293 0.000000e+00 737.0
15 TraesCS1B01G078300 chr7B 93.125 480 29 4 1683 2161 649342133 649342609 0.000000e+00 701.0
16 TraesCS1B01G078300 chr7B 80.859 256 43 3 145 397 32563118 32562866 1.800000e-46 196.0
17 TraesCS1B01G078300 chr7B 84.795 171 13 4 1502 1669 642834032 642833872 2.360000e-35 159.0
18 TraesCS1B01G078300 chr7B 100.000 55 0 0 1615 1669 649342016 649342070 4.030000e-18 102.0
19 TraesCS1B01G078300 chr7B 94.000 50 3 0 1384 1433 604328958 604329007 2.440000e-10 76.8
20 TraesCS1B01G078300 chr3B 92.564 511 31 5 1683 2192 43544562 43545066 0.000000e+00 726.0
21 TraesCS1B01G078300 chr3B 89.474 171 15 3 1502 1669 43544329 43544499 1.780000e-51 213.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G078300 chr1B 61318764 61321054 2290 False 4231.0 4231 100.0000 1 2291 1 chr1B.!!$F1 2290
1 TraesCS1B01G078300 chr1B 550680420 550681392 972 False 1624.0 1624 96.8170 414 1384 1 chr1B.!!$F2 970
2 TraesCS1B01G078300 chr6B 412282830 412283800 970 True 1626.0 1626 96.9140 414 1383 1 chr6B.!!$R1 969
3 TraesCS1B01G078300 chr6B 708042010 708042981 971 True 1578.0 1578 95.9920 414 1384 1 chr6B.!!$R2 970
4 TraesCS1B01G078300 chr2B 383360617 383361588 971 False 1589.0 1589 96.1970 414 1383 1 chr2B.!!$F1 969
5 TraesCS1B01G078300 chr1A 373760056 373761028 972 False 1482.0 1482 94.1600 414 1386 1 chr1A.!!$F1 972
6 TraesCS1B01G078300 chr1A 560399571 560400541 970 False 1105.0 1105 87.2430 415 1383 1 chr1A.!!$F2 968
7 TraesCS1B01G078300 chr3A 11778816 11779790 974 False 1469.0 1469 93.9550 414 1383 1 chr3A.!!$F1 969
8 TraesCS1B01G078300 chr2A 671341820 671342787 967 True 1413.0 1413 93.0040 414 1383 1 chr2A.!!$R1 969
9 TraesCS1B01G078300 chr4A 67262179 67263147 968 True 1103.0 1103 87.2430 414 1383 1 chr4A.!!$R1 969
10 TraesCS1B01G078300 chrUn 456779542 456780273 731 False 1051.0 1051 92.6830 1506 2236 1 chrUn.!!$F1 730
11 TraesCS1B01G078300 chr5B 380217159 380217959 800 False 485.5 800 88.6560 1503 2250 2 chr5B.!!$F1 747
12 TraesCS1B01G078300 chr7B 642833293 642834032 739 True 448.0 737 88.5805 1502 2204 2 chr7B.!!$R2 702
13 TraesCS1B01G078300 chr7B 649342016 649342609 593 False 401.5 701 96.5625 1615 2161 2 chr7B.!!$F2 546
14 TraesCS1B01G078300 chr3B 43544329 43545066 737 False 469.5 726 91.0190 1502 2192 2 chr3B.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.028902 GAATTTACGGGCCGACATGC 59.971 55.0 35.78 15.6 0.0 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1396 1405 0.031585 TGCAGACGCGTAGAACAAGT 59.968 50.0 13.97 0.0 42.97 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.594603 AGTTGCTGCACTTATACTCGT 57.405 42.857 0.00 0.00 0.00 4.18
24 25 3.254060 AGTTGCTGCACTTATACTCGTG 58.746 45.455 0.00 0.00 0.00 4.35
25 26 2.293677 TGCTGCACTTATACTCGTGG 57.706 50.000 0.00 0.00 0.00 4.94
26 27 1.822371 TGCTGCACTTATACTCGTGGA 59.178 47.619 0.00 0.00 0.00 4.02
28 29 2.159226 GCTGCACTTATACTCGTGGAGT 60.159 50.000 14.63 3.52 46.95 3.85
29 30 3.066342 GCTGCACTTATACTCGTGGAGTA 59.934 47.826 7.84 7.84 46.95 2.59
30 31 4.599047 CTGCACTTATACTCGTGGAGTAC 58.401 47.826 7.58 0.00 46.06 2.73
31 32 4.011698 TGCACTTATACTCGTGGAGTACA 58.988 43.478 7.58 0.00 46.06 2.90
32 33 4.460034 TGCACTTATACTCGTGGAGTACAA 59.540 41.667 7.58 2.39 46.06 2.41
33 34 4.797349 GCACTTATACTCGTGGAGTACAAC 59.203 45.833 7.58 0.00 46.06 3.32
34 35 5.620654 GCACTTATACTCGTGGAGTACAACA 60.621 44.000 7.58 0.00 46.06 3.33
35 36 5.798934 CACTTATACTCGTGGAGTACAACAC 59.201 44.000 7.58 9.22 46.06 3.32
36 37 5.474532 ACTTATACTCGTGGAGTACAACACA 59.525 40.000 16.78 6.42 46.06 3.72
37 38 4.859304 ATACTCGTGGAGTACAACACAA 57.141 40.909 16.78 1.58 46.06 3.33
38 39 3.530265 ACTCGTGGAGTACAACACAAA 57.470 42.857 16.78 6.39 41.51 2.83
39 40 3.454375 ACTCGTGGAGTACAACACAAAG 58.546 45.455 16.78 14.83 41.51 2.77
40 41 2.206750 TCGTGGAGTACAACACAAAGC 58.793 47.619 16.78 0.00 37.45 3.51
41 42 1.937223 CGTGGAGTACAACACAAAGCA 59.063 47.619 16.78 0.00 37.45 3.91
42 43 2.353269 CGTGGAGTACAACACAAAGCAA 59.647 45.455 16.78 0.00 37.45 3.91
43 44 3.003275 CGTGGAGTACAACACAAAGCAAT 59.997 43.478 16.78 0.00 37.45 3.56
44 45 4.212425 CGTGGAGTACAACACAAAGCAATA 59.788 41.667 16.78 0.00 37.45 1.90
45 46 5.449304 GTGGAGTACAACACAAAGCAATAC 58.551 41.667 13.17 0.00 37.54 1.89
46 47 5.008217 GTGGAGTACAACACAAAGCAATACA 59.992 40.000 13.17 0.00 37.54 2.29
47 48 5.590663 TGGAGTACAACACAAAGCAATACAA 59.409 36.000 0.00 0.00 0.00 2.41
48 49 6.095580 TGGAGTACAACACAAAGCAATACAAA 59.904 34.615 0.00 0.00 0.00 2.83
49 50 7.145323 GGAGTACAACACAAAGCAATACAAAT 58.855 34.615 0.00 0.00 0.00 2.32
50 51 7.114811 GGAGTACAACACAAAGCAATACAAATG 59.885 37.037 0.00 0.00 0.00 2.32
51 52 7.711846 AGTACAACACAAAGCAATACAAATGA 58.288 30.769 0.00 0.00 0.00 2.57
52 53 6.826893 ACAACACAAAGCAATACAAATGAC 57.173 33.333 0.00 0.00 0.00 3.06
53 54 6.572519 ACAACACAAAGCAATACAAATGACT 58.427 32.000 0.00 0.00 0.00 3.41
54 55 6.476380 ACAACACAAAGCAATACAAATGACTG 59.524 34.615 0.00 0.00 0.00 3.51
55 56 4.984161 ACACAAAGCAATACAAATGACTGC 59.016 37.500 0.00 0.00 0.00 4.40
56 57 4.983538 CACAAAGCAATACAAATGACTGCA 59.016 37.500 0.00 0.00 35.44 4.41
57 58 5.462729 CACAAAGCAATACAAATGACTGCAA 59.537 36.000 0.00 0.00 35.44 4.08
58 59 6.146510 CACAAAGCAATACAAATGACTGCAAT 59.853 34.615 0.00 0.00 35.44 3.56
59 60 6.707161 ACAAAGCAATACAAATGACTGCAATT 59.293 30.769 0.00 0.00 35.44 2.32
60 61 6.956299 AAGCAATACAAATGACTGCAATTC 57.044 33.333 0.00 0.00 35.44 2.17
61 62 6.276832 AGCAATACAAATGACTGCAATTCT 57.723 33.333 0.00 0.00 35.44 2.40
62 63 6.097356 AGCAATACAAATGACTGCAATTCTG 58.903 36.000 0.00 0.00 35.44 3.02
63 64 5.865552 GCAATACAAATGACTGCAATTCTGT 59.134 36.000 0.00 0.00 33.19 3.41
64 65 7.028962 GCAATACAAATGACTGCAATTCTGTA 58.971 34.615 0.00 0.00 33.19 2.74
65 66 7.219535 GCAATACAAATGACTGCAATTCTGTAG 59.780 37.037 0.00 0.00 40.82 2.74
66 67 5.051891 ACAAATGACTGCAATTCTGTAGC 57.948 39.130 0.00 0.00 38.75 3.58
67 68 4.520111 ACAAATGACTGCAATTCTGTAGCA 59.480 37.500 0.00 0.00 38.75 3.49
71 72 3.963733 TGCAATTCTGTAGCAGCCT 57.036 47.368 0.00 0.00 33.75 4.58
72 73 2.205022 TGCAATTCTGTAGCAGCCTT 57.795 45.000 0.00 0.00 33.75 4.35
73 74 2.517959 TGCAATTCTGTAGCAGCCTTT 58.482 42.857 0.00 0.00 33.75 3.11
74 75 2.489329 TGCAATTCTGTAGCAGCCTTTC 59.511 45.455 0.00 0.00 33.75 2.62
75 76 2.751806 GCAATTCTGTAGCAGCCTTTCT 59.248 45.455 0.00 0.00 0.00 2.52
76 77 3.192212 GCAATTCTGTAGCAGCCTTTCTT 59.808 43.478 0.00 0.00 0.00 2.52
77 78 4.673841 GCAATTCTGTAGCAGCCTTTCTTC 60.674 45.833 0.00 0.00 0.00 2.87
78 79 3.769739 TTCTGTAGCAGCCTTTCTTCA 57.230 42.857 0.00 0.00 0.00 3.02
79 80 3.325293 TCTGTAGCAGCCTTTCTTCAG 57.675 47.619 0.00 0.00 0.00 3.02
80 81 2.899900 TCTGTAGCAGCCTTTCTTCAGA 59.100 45.455 0.00 0.00 35.38 3.27
81 82 2.999355 CTGTAGCAGCCTTTCTTCAGAC 59.001 50.000 0.00 0.00 31.86 3.51
82 83 2.634940 TGTAGCAGCCTTTCTTCAGACT 59.365 45.455 0.00 0.00 0.00 3.24
83 84 2.181954 AGCAGCCTTTCTTCAGACTG 57.818 50.000 0.00 0.00 0.00 3.51
84 85 1.163554 GCAGCCTTTCTTCAGACTGG 58.836 55.000 1.81 0.00 0.00 4.00
85 86 1.271054 GCAGCCTTTCTTCAGACTGGA 60.271 52.381 1.81 0.00 0.00 3.86
86 87 2.811873 GCAGCCTTTCTTCAGACTGGAA 60.812 50.000 1.81 0.00 0.00 3.53
87 88 2.810852 CAGCCTTTCTTCAGACTGGAAC 59.189 50.000 1.81 0.00 0.00 3.62
88 89 2.439507 AGCCTTTCTTCAGACTGGAACA 59.560 45.455 1.81 0.00 0.00 3.18
89 90 3.117888 AGCCTTTCTTCAGACTGGAACAA 60.118 43.478 1.81 0.00 38.70 2.83
90 91 3.823304 GCCTTTCTTCAGACTGGAACAAT 59.177 43.478 1.81 0.00 38.70 2.71
91 92 5.003804 GCCTTTCTTCAGACTGGAACAATA 58.996 41.667 1.81 0.00 38.70 1.90
92 93 5.106515 GCCTTTCTTCAGACTGGAACAATAC 60.107 44.000 1.81 0.00 38.70 1.89
93 94 6.234177 CCTTTCTTCAGACTGGAACAATACT 58.766 40.000 1.81 0.00 38.70 2.12
94 95 6.712547 CCTTTCTTCAGACTGGAACAATACTT 59.287 38.462 1.81 0.00 38.70 2.24
95 96 7.229506 CCTTTCTTCAGACTGGAACAATACTTT 59.770 37.037 1.81 0.00 38.70 2.66
96 97 8.519799 TTTCTTCAGACTGGAACAATACTTTT 57.480 30.769 1.81 0.00 38.70 2.27
97 98 8.519799 TTCTTCAGACTGGAACAATACTTTTT 57.480 30.769 1.81 0.00 38.70 1.94
98 99 8.154649 TCTTCAGACTGGAACAATACTTTTTC 57.845 34.615 1.81 0.00 38.70 2.29
99 100 7.993183 TCTTCAGACTGGAACAATACTTTTTCT 59.007 33.333 1.81 0.00 38.70 2.52
100 101 8.519799 TTCAGACTGGAACAATACTTTTTCTT 57.480 30.769 1.81 0.00 38.70 2.52
101 102 8.154649 TCAGACTGGAACAATACTTTTTCTTC 57.845 34.615 1.81 0.00 38.70 2.87
102 103 7.773224 TCAGACTGGAACAATACTTTTTCTTCA 59.227 33.333 1.81 0.00 38.70 3.02
103 104 8.072567 CAGACTGGAACAATACTTTTTCTTCAG 58.927 37.037 0.00 0.00 38.70 3.02
104 105 7.993183 AGACTGGAACAATACTTTTTCTTCAGA 59.007 33.333 0.00 0.00 38.70 3.27
105 106 8.697507 ACTGGAACAATACTTTTTCTTCAGAT 57.302 30.769 0.00 0.00 38.70 2.90
106 107 9.793259 ACTGGAACAATACTTTTTCTTCAGATA 57.207 29.630 0.00 0.00 38.70 1.98
112 113 9.678260 ACAATACTTTTTCTTCAGATATCAGCT 57.322 29.630 5.32 0.00 0.00 4.24
115 116 9.896645 ATACTTTTTCTTCAGATATCAGCTTGA 57.103 29.630 5.32 0.00 0.00 3.02
116 117 8.038492 ACTTTTTCTTCAGATATCAGCTTGAC 57.962 34.615 5.32 0.00 0.00 3.18
117 118 6.992063 TTTTCTTCAGATATCAGCTTGACC 57.008 37.500 5.32 0.00 0.00 4.02
118 119 4.679373 TCTTCAGATATCAGCTTGACCC 57.321 45.455 5.32 0.00 0.00 4.46
119 120 4.033009 TCTTCAGATATCAGCTTGACCCA 58.967 43.478 5.32 0.00 0.00 4.51
120 121 4.471025 TCTTCAGATATCAGCTTGACCCAA 59.529 41.667 5.32 0.00 0.00 4.12
121 122 4.142609 TCAGATATCAGCTTGACCCAAC 57.857 45.455 5.32 0.00 0.00 3.77
122 123 3.519107 TCAGATATCAGCTTGACCCAACA 59.481 43.478 5.32 0.00 0.00 3.33
123 124 3.624861 CAGATATCAGCTTGACCCAACAC 59.375 47.826 5.32 0.00 0.00 3.32
124 125 2.489938 TATCAGCTTGACCCAACACC 57.510 50.000 0.00 0.00 0.00 4.16
125 126 0.251341 ATCAGCTTGACCCAACACCC 60.251 55.000 0.00 0.00 0.00 4.61
126 127 2.113139 AGCTTGACCCAACACCCG 59.887 61.111 0.00 0.00 0.00 5.28
127 128 2.112297 GCTTGACCCAACACCCGA 59.888 61.111 0.00 0.00 0.00 5.14
128 129 1.303317 GCTTGACCCAACACCCGAT 60.303 57.895 0.00 0.00 0.00 4.18
129 130 1.586154 GCTTGACCCAACACCCGATG 61.586 60.000 0.00 0.00 0.00 3.84
130 131 0.960364 CTTGACCCAACACCCGATGG 60.960 60.000 0.00 0.00 34.88 3.51
131 132 1.419720 TTGACCCAACACCCGATGGA 61.420 55.000 0.00 0.00 37.24 3.41
132 133 1.377229 GACCCAACACCCGATGGAA 59.623 57.895 0.00 0.00 37.24 3.53
133 134 0.958876 GACCCAACACCCGATGGAAC 60.959 60.000 0.00 0.00 37.24 3.62
149 150 4.008074 TGGAACAACACTTCAGAGATCC 57.992 45.455 0.00 0.00 31.92 3.36
150 151 3.244561 TGGAACAACACTTCAGAGATCCC 60.245 47.826 0.00 0.00 31.92 3.85
151 152 3.008485 GGAACAACACTTCAGAGATCCCT 59.992 47.826 0.00 0.00 0.00 4.20
152 153 3.971245 ACAACACTTCAGAGATCCCTC 57.029 47.619 0.00 0.00 39.72 4.30
153 154 3.242867 ACAACACTTCAGAGATCCCTCA 58.757 45.455 0.00 0.00 41.87 3.86
154 155 3.648067 ACAACACTTCAGAGATCCCTCAA 59.352 43.478 0.00 0.00 41.87 3.02
155 156 4.288105 ACAACACTTCAGAGATCCCTCAAT 59.712 41.667 0.00 0.00 41.87 2.57
156 157 4.751767 ACACTTCAGAGATCCCTCAATC 57.248 45.455 0.00 0.00 41.87 2.67
157 158 3.131933 ACACTTCAGAGATCCCTCAATCG 59.868 47.826 0.00 0.00 41.87 3.34
158 159 3.382865 CACTTCAGAGATCCCTCAATCGA 59.617 47.826 0.00 0.00 41.87 3.59
159 160 3.383185 ACTTCAGAGATCCCTCAATCGAC 59.617 47.826 0.00 0.00 41.87 4.20
160 161 2.311463 TCAGAGATCCCTCAATCGACC 58.689 52.381 0.00 0.00 41.87 4.79
161 162 1.000827 CAGAGATCCCTCAATCGACCG 60.001 57.143 0.00 0.00 41.87 4.79
162 163 1.133761 AGAGATCCCTCAATCGACCGA 60.134 52.381 0.00 0.00 41.87 4.69
163 164 1.268352 GAGATCCCTCAATCGACCGAG 59.732 57.143 6.04 6.04 39.24 4.63
164 165 0.319125 GATCCCTCAATCGACCGAGC 60.319 60.000 7.29 0.00 0.00 5.03
165 166 1.749334 ATCCCTCAATCGACCGAGCC 61.749 60.000 7.29 0.00 0.00 4.70
166 167 2.278857 CCTCAATCGACCGAGCCG 60.279 66.667 7.29 0.00 0.00 5.52
167 168 2.956964 CTCAATCGACCGAGCCGC 60.957 66.667 0.32 0.00 0.00 6.53
168 169 3.699955 CTCAATCGACCGAGCCGCA 62.700 63.158 0.32 0.00 0.00 5.69
169 170 3.257561 CAATCGACCGAGCCGCAG 61.258 66.667 0.00 0.00 0.00 5.18
170 171 3.449227 AATCGACCGAGCCGCAGA 61.449 61.111 0.00 0.00 0.00 4.26
171 172 3.001902 AATCGACCGAGCCGCAGAA 62.002 57.895 0.00 0.00 0.00 3.02
172 173 2.501223 AATCGACCGAGCCGCAGAAA 62.501 55.000 0.00 0.00 0.00 2.52
173 174 2.298158 ATCGACCGAGCCGCAGAAAT 62.298 55.000 0.00 0.00 0.00 2.17
174 175 2.517450 CGACCGAGCCGCAGAAATC 61.517 63.158 0.00 0.00 0.00 2.17
175 176 2.509336 ACCGAGCCGCAGAAATCG 60.509 61.111 0.00 0.00 35.02 3.34
176 177 2.509336 CCGAGCCGCAGAAATCGT 60.509 61.111 0.00 0.00 33.43 3.73
177 178 2.100631 CCGAGCCGCAGAAATCGTT 61.101 57.895 0.00 0.00 33.43 3.85
178 179 1.635663 CCGAGCCGCAGAAATCGTTT 61.636 55.000 0.00 0.00 33.43 3.60
179 180 0.996462 CGAGCCGCAGAAATCGTTTA 59.004 50.000 0.00 0.00 0.00 2.01
180 181 1.266891 CGAGCCGCAGAAATCGTTTAC 60.267 52.381 0.00 0.00 0.00 2.01
181 182 0.719465 AGCCGCAGAAATCGTTTACG 59.281 50.000 0.00 0.00 41.45 3.18
182 183 0.247537 GCCGCAGAAATCGTTTACGG 60.248 55.000 2.09 0.00 41.97 4.02
183 184 0.372334 CCGCAGAAATCGTTTACGGG 59.628 55.000 2.09 0.00 40.29 5.28
184 185 0.247537 CGCAGAAATCGTTTACGGGC 60.248 55.000 2.09 0.00 40.29 6.13
185 186 1.084289 GCAGAAATCGTTTACGGGCT 58.916 50.000 2.09 0.00 40.29 5.19
186 187 1.062148 GCAGAAATCGTTTACGGGCTC 59.938 52.381 2.09 0.00 40.29 4.70
187 188 1.664151 CAGAAATCGTTTACGGGCTCC 59.336 52.381 2.09 0.00 40.29 4.70
188 189 1.012086 GAAATCGTTTACGGGCTCCC 58.988 55.000 2.09 0.00 40.29 4.30
199 200 3.875865 GGGCTCCCGTAAACAGAAT 57.124 52.632 0.00 0.00 0.00 2.40
200 201 2.124277 GGGCTCCCGTAAACAGAATT 57.876 50.000 0.00 0.00 0.00 2.17
201 202 2.443416 GGGCTCCCGTAAACAGAATTT 58.557 47.619 0.00 0.00 0.00 1.82
202 203 3.613030 GGGCTCCCGTAAACAGAATTTA 58.387 45.455 0.00 0.00 0.00 1.40
203 204 3.376234 GGGCTCCCGTAAACAGAATTTAC 59.624 47.826 0.00 0.41 0.00 2.01
209 210 3.394313 GTAAACAGAATTTACGGGCCG 57.606 47.619 27.06 27.06 0.00 6.13
210 211 2.188062 AAACAGAATTTACGGGCCGA 57.812 45.000 35.78 11.41 0.00 5.54
211 212 1.445871 AACAGAATTTACGGGCCGAC 58.554 50.000 35.78 15.27 0.00 4.79
212 213 0.322322 ACAGAATTTACGGGCCGACA 59.678 50.000 35.78 17.40 0.00 4.35
213 214 1.065709 ACAGAATTTACGGGCCGACAT 60.066 47.619 35.78 17.79 0.00 3.06
214 215 1.330521 CAGAATTTACGGGCCGACATG 59.669 52.381 35.78 16.16 0.00 3.21
215 216 0.028902 GAATTTACGGGCCGACATGC 59.971 55.000 35.78 15.60 0.00 4.06
223 224 4.408821 GCCGACATGCCACTGGGA 62.409 66.667 0.00 0.00 35.59 4.37
224 225 2.436646 CCGACATGCCACTGGGAC 60.437 66.667 0.00 0.00 35.59 4.46
225 226 2.347114 CGACATGCCACTGGGACA 59.653 61.111 0.00 0.00 35.59 4.02
226 227 2.034879 CGACATGCCACTGGGACAC 61.035 63.158 0.00 0.00 35.59 3.67
227 228 1.073025 GACATGCCACTGGGACACA 59.927 57.895 0.00 0.00 35.59 3.72
228 229 0.537143 GACATGCCACTGGGACACAA 60.537 55.000 0.00 0.00 35.59 3.33
229 230 0.112995 ACATGCCACTGGGACACAAT 59.887 50.000 0.00 0.00 35.59 2.71
230 231 1.354031 ACATGCCACTGGGACACAATA 59.646 47.619 0.00 0.00 35.59 1.90
231 232 2.019249 CATGCCACTGGGACACAATAG 58.981 52.381 0.00 0.00 35.59 1.73
232 233 1.357137 TGCCACTGGGACACAATAGA 58.643 50.000 0.00 0.00 35.59 1.98
233 234 1.915489 TGCCACTGGGACACAATAGAT 59.085 47.619 0.00 0.00 35.59 1.98
234 235 2.092968 TGCCACTGGGACACAATAGATC 60.093 50.000 0.00 0.00 35.59 2.75
235 236 2.746472 GCCACTGGGACACAATAGATCC 60.746 54.545 0.00 0.00 35.59 3.36
238 239 3.307379 GGGACACAATAGATCCCGC 57.693 57.895 0.00 0.00 42.78 6.13
239 240 0.468226 GGGACACAATAGATCCCGCA 59.532 55.000 0.00 0.00 42.78 5.69
240 241 1.072331 GGGACACAATAGATCCCGCAT 59.928 52.381 0.00 0.00 42.78 4.73
241 242 2.301870 GGGACACAATAGATCCCGCATA 59.698 50.000 0.00 0.00 42.78 3.14
242 243 3.055094 GGGACACAATAGATCCCGCATAT 60.055 47.826 0.00 0.00 42.78 1.78
243 244 4.161565 GGGACACAATAGATCCCGCATATA 59.838 45.833 0.00 0.00 42.78 0.86
244 245 5.163301 GGGACACAATAGATCCCGCATATAT 60.163 44.000 0.00 0.00 42.78 0.86
245 246 5.986135 GGACACAATAGATCCCGCATATATC 59.014 44.000 0.00 0.00 0.00 1.63
246 247 6.406961 GGACACAATAGATCCCGCATATATCA 60.407 42.308 0.00 0.00 0.00 2.15
247 248 7.129457 ACACAATAGATCCCGCATATATCAT 57.871 36.000 0.00 0.00 0.00 2.45
248 249 7.212976 ACACAATAGATCCCGCATATATCATC 58.787 38.462 0.00 0.00 0.00 2.92
249 250 7.147672 ACACAATAGATCCCGCATATATCATCA 60.148 37.037 0.00 0.00 0.00 3.07
250 251 7.384387 CACAATAGATCCCGCATATATCATCAG 59.616 40.741 0.00 0.00 0.00 2.90
251 252 7.288621 ACAATAGATCCCGCATATATCATCAGA 59.711 37.037 0.00 0.00 0.00 3.27
252 253 7.846101 ATAGATCCCGCATATATCATCAGAA 57.154 36.000 0.00 0.00 0.00 3.02
253 254 6.744175 AGATCCCGCATATATCATCAGAAT 57.256 37.500 0.00 0.00 0.00 2.40
254 255 7.134362 AGATCCCGCATATATCATCAGAATT 57.866 36.000 0.00 0.00 0.00 2.17
255 256 7.215789 AGATCCCGCATATATCATCAGAATTC 58.784 38.462 0.00 0.00 0.00 2.17
256 257 6.298441 TCCCGCATATATCATCAGAATTCA 57.702 37.500 8.44 0.00 0.00 2.57
257 258 6.710278 TCCCGCATATATCATCAGAATTCAA 58.290 36.000 8.44 0.00 0.00 2.69
258 259 6.595326 TCCCGCATATATCATCAGAATTCAAC 59.405 38.462 8.44 0.00 0.00 3.18
259 260 6.372381 CCCGCATATATCATCAGAATTCAACA 59.628 38.462 8.44 0.00 0.00 3.33
260 261 7.239271 CCGCATATATCATCAGAATTCAACAC 58.761 38.462 8.44 0.00 0.00 3.32
261 262 6.952083 CGCATATATCATCAGAATTCAACACG 59.048 38.462 8.44 0.00 0.00 4.49
262 263 7.148755 CGCATATATCATCAGAATTCAACACGA 60.149 37.037 8.44 0.00 0.00 4.35
263 264 8.663025 GCATATATCATCAGAATTCAACACGAT 58.337 33.333 8.44 5.58 0.00 3.73
267 268 6.799926 TCATCAGAATTCAACACGATTTCA 57.200 33.333 8.44 0.00 36.75 2.69
268 269 7.200778 TCATCAGAATTCAACACGATTTCAA 57.799 32.000 8.44 0.00 36.75 2.69
269 270 7.647228 TCATCAGAATTCAACACGATTTCAAA 58.353 30.769 8.44 0.00 36.75 2.69
270 271 8.134261 TCATCAGAATTCAACACGATTTCAAAA 58.866 29.630 8.44 0.00 36.75 2.44
271 272 8.754096 CATCAGAATTCAACACGATTTCAAAAA 58.246 29.630 8.44 0.00 36.75 1.94
272 273 8.114359 TCAGAATTCAACACGATTTCAAAAAC 57.886 30.769 8.44 0.00 36.75 2.43
273 274 7.973388 TCAGAATTCAACACGATTTCAAAAACT 59.027 29.630 8.44 0.00 36.75 2.66
274 275 9.232082 CAGAATTCAACACGATTTCAAAAACTA 57.768 29.630 8.44 0.00 36.75 2.24
275 276 9.450807 AGAATTCAACACGATTTCAAAAACTAG 57.549 29.630 8.44 0.00 36.75 2.57
276 277 9.233232 GAATTCAACACGATTTCAAAAACTAGT 57.767 29.630 0.00 0.00 35.16 2.57
278 279 9.878599 ATTCAACACGATTTCAAAAACTAGTAG 57.121 29.630 0.00 0.00 0.00 2.57
279 280 8.428186 TCAACACGATTTCAAAAACTAGTAGT 57.572 30.769 0.00 0.00 0.00 2.73
280 281 8.885722 TCAACACGATTTCAAAAACTAGTAGTT 58.114 29.630 9.85 9.85 40.80 2.24
282 283 9.498307 AACACGATTTCAAAAACTAGTAGTTTG 57.502 29.630 25.25 16.37 46.78 2.93
283 284 7.642586 ACACGATTTCAAAAACTAGTAGTTTGC 59.357 33.333 25.25 10.46 46.78 3.68
284 285 6.849305 ACGATTTCAAAAACTAGTAGTTTGCG 59.151 34.615 25.25 19.21 46.78 4.85
285 286 6.183359 CGATTTCAAAAACTAGTAGTTTGCGC 60.183 38.462 25.25 0.00 46.78 6.09
286 287 4.477302 TCAAAAACTAGTAGTTTGCGCC 57.523 40.909 25.25 0.00 46.78 6.53
287 288 3.878103 TCAAAAACTAGTAGTTTGCGCCA 59.122 39.130 25.25 8.51 46.78 5.69
288 289 4.517453 TCAAAAACTAGTAGTTTGCGCCAT 59.483 37.500 25.25 8.92 46.78 4.40
289 290 5.701750 TCAAAAACTAGTAGTTTGCGCCATA 59.298 36.000 25.25 7.73 46.78 2.74
290 291 6.205076 TCAAAAACTAGTAGTTTGCGCCATAA 59.795 34.615 25.25 6.45 46.78 1.90
291 292 6.753107 AAAACTAGTAGTTTGCGCCATAAT 57.247 33.333 25.25 6.96 46.78 1.28
292 293 6.753107 AAACTAGTAGTTTGCGCCATAATT 57.247 33.333 24.22 0.00 45.83 1.40
293 294 6.753107 AACTAGTAGTTTGCGCCATAATTT 57.247 33.333 9.85 0.00 34.11 1.82
294 295 7.852971 AACTAGTAGTTTGCGCCATAATTTA 57.147 32.000 9.85 0.00 34.11 1.40
295 296 7.242914 ACTAGTAGTTTGCGCCATAATTTAC 57.757 36.000 4.18 4.61 0.00 2.01
296 297 6.819649 ACTAGTAGTTTGCGCCATAATTTACA 59.180 34.615 4.18 0.00 0.00 2.41
297 298 6.693315 AGTAGTTTGCGCCATAATTTACAT 57.307 33.333 4.18 0.00 0.00 2.29
298 299 6.725246 AGTAGTTTGCGCCATAATTTACATC 58.275 36.000 4.18 0.00 0.00 3.06
299 300 5.574891 AGTTTGCGCCATAATTTACATCA 57.425 34.783 4.18 0.00 0.00 3.07
300 301 5.339990 AGTTTGCGCCATAATTTACATCAC 58.660 37.500 4.18 0.00 0.00 3.06
301 302 3.980646 TGCGCCATAATTTACATCACC 57.019 42.857 4.18 0.00 0.00 4.02
302 303 2.289274 TGCGCCATAATTTACATCACCG 59.711 45.455 4.18 0.00 0.00 4.94
303 304 2.350388 GCGCCATAATTTACATCACCGG 60.350 50.000 0.00 0.00 0.00 5.28
304 305 3.135225 CGCCATAATTTACATCACCGGA 58.865 45.455 9.46 0.00 0.00 5.14
305 306 3.186409 CGCCATAATTTACATCACCGGAG 59.814 47.826 9.46 0.00 0.00 4.63
306 307 4.134563 GCCATAATTTACATCACCGGAGT 58.865 43.478 9.46 3.40 0.00 3.85
307 308 4.578928 GCCATAATTTACATCACCGGAGTT 59.421 41.667 9.46 0.00 0.00 3.01
308 309 5.277828 GCCATAATTTACATCACCGGAGTTC 60.278 44.000 9.46 0.00 0.00 3.01
309 310 5.238650 CCATAATTTACATCACCGGAGTTCC 59.761 44.000 9.46 0.00 0.00 3.62
310 311 3.992943 ATTTACATCACCGGAGTTCCA 57.007 42.857 9.46 0.00 35.14 3.53
311 312 3.773418 TTTACATCACCGGAGTTCCAA 57.227 42.857 9.46 0.00 35.14 3.53
312 313 3.773418 TTACATCACCGGAGTTCCAAA 57.227 42.857 9.46 0.00 35.14 3.28
313 314 1.892209 ACATCACCGGAGTTCCAAAC 58.108 50.000 9.46 0.00 35.14 2.93
314 315 1.142060 ACATCACCGGAGTTCCAAACA 59.858 47.619 9.46 0.00 35.14 2.83
315 316 2.224769 ACATCACCGGAGTTCCAAACAT 60.225 45.455 9.46 0.00 35.14 2.71
316 317 3.008594 ACATCACCGGAGTTCCAAACATA 59.991 43.478 9.46 0.00 35.14 2.29
317 318 3.328382 TCACCGGAGTTCCAAACATAG 57.672 47.619 9.46 0.00 35.14 2.23
318 319 2.635915 TCACCGGAGTTCCAAACATAGT 59.364 45.455 9.46 0.00 35.14 2.12
319 320 2.742053 CACCGGAGTTCCAAACATAGTG 59.258 50.000 9.46 0.00 35.14 2.74
320 321 1.737793 CCGGAGTTCCAAACATAGTGC 59.262 52.381 0.00 0.00 35.14 4.40
321 322 2.422597 CGGAGTTCCAAACATAGTGCA 58.577 47.619 0.00 0.00 35.14 4.57
322 323 3.009723 CGGAGTTCCAAACATAGTGCAT 58.990 45.455 0.00 0.00 35.14 3.96
323 324 4.188462 CGGAGTTCCAAACATAGTGCATA 58.812 43.478 0.00 0.00 35.14 3.14
324 325 4.034048 CGGAGTTCCAAACATAGTGCATAC 59.966 45.833 0.00 0.00 35.14 2.39
325 326 4.941263 GGAGTTCCAAACATAGTGCATACA 59.059 41.667 0.00 0.00 35.64 2.29
326 327 5.414454 GGAGTTCCAAACATAGTGCATACAA 59.586 40.000 0.00 0.00 35.64 2.41
327 328 6.403636 GGAGTTCCAAACATAGTGCATACAAG 60.404 42.308 0.00 0.00 35.64 3.16
328 329 4.963276 TCCAAACATAGTGCATACAAGC 57.037 40.909 0.00 0.00 0.00 4.01
329 330 4.588899 TCCAAACATAGTGCATACAAGCT 58.411 39.130 0.00 0.00 34.99 3.74
330 331 5.009631 TCCAAACATAGTGCATACAAGCTT 58.990 37.500 0.00 0.00 34.99 3.74
331 332 6.176896 TCCAAACATAGTGCATACAAGCTTA 58.823 36.000 0.00 0.00 34.99 3.09
332 333 6.657117 TCCAAACATAGTGCATACAAGCTTAA 59.343 34.615 0.00 0.00 34.99 1.85
333 334 7.339212 TCCAAACATAGTGCATACAAGCTTAAT 59.661 33.333 0.00 0.00 34.99 1.40
334 335 7.975616 CCAAACATAGTGCATACAAGCTTAATT 59.024 33.333 0.00 0.00 34.99 1.40
337 338 9.613428 AACATAGTGCATACAAGCTTAATTAGA 57.387 29.630 0.00 0.00 34.99 2.10
338 339 9.046296 ACATAGTGCATACAAGCTTAATTAGAC 57.954 33.333 0.00 0.00 34.99 2.59
339 340 9.045223 CATAGTGCATACAAGCTTAATTAGACA 57.955 33.333 0.00 0.00 34.99 3.41
340 341 7.308782 AGTGCATACAAGCTTAATTAGACAC 57.691 36.000 0.00 2.51 34.99 3.67
341 342 6.878923 AGTGCATACAAGCTTAATTAGACACA 59.121 34.615 0.00 0.00 34.99 3.72
342 343 7.065085 AGTGCATACAAGCTTAATTAGACACAG 59.935 37.037 0.00 0.00 34.99 3.66
343 344 7.064609 GTGCATACAAGCTTAATTAGACACAGA 59.935 37.037 0.00 0.00 34.99 3.41
344 345 7.770433 TGCATACAAGCTTAATTAGACACAGAT 59.230 33.333 0.00 0.00 34.99 2.90
345 346 8.279103 GCATACAAGCTTAATTAGACACAGATC 58.721 37.037 0.00 0.00 0.00 2.75
346 347 9.317936 CATACAAGCTTAATTAGACACAGATCA 57.682 33.333 0.00 0.00 0.00 2.92
347 348 9.890629 ATACAAGCTTAATTAGACACAGATCAA 57.109 29.630 0.00 0.00 0.00 2.57
348 349 8.034058 ACAAGCTTAATTAGACACAGATCAAC 57.966 34.615 0.00 0.00 0.00 3.18
349 350 6.893958 AGCTTAATTAGACACAGATCAACG 57.106 37.500 0.00 0.00 0.00 4.10
350 351 5.812642 AGCTTAATTAGACACAGATCAACGG 59.187 40.000 0.00 0.00 0.00 4.44
351 352 5.810587 GCTTAATTAGACACAGATCAACGGA 59.189 40.000 0.00 0.00 0.00 4.69
352 353 6.312918 GCTTAATTAGACACAGATCAACGGAA 59.687 38.462 0.00 0.00 0.00 4.30
353 354 7.148474 GCTTAATTAGACACAGATCAACGGAAA 60.148 37.037 0.00 0.00 0.00 3.13
354 355 8.786826 TTAATTAGACACAGATCAACGGAAAT 57.213 30.769 0.00 0.00 0.00 2.17
355 356 7.687941 AATTAGACACAGATCAACGGAAATT 57.312 32.000 0.00 0.00 0.00 1.82
356 357 8.786826 AATTAGACACAGATCAACGGAAATTA 57.213 30.769 0.00 0.00 0.00 1.40
357 358 8.786826 ATTAGACACAGATCAACGGAAATTAA 57.213 30.769 0.00 0.00 0.00 1.40
358 359 8.610248 TTAGACACAGATCAACGGAAATTAAA 57.390 30.769 0.00 0.00 0.00 1.52
359 360 7.133891 AGACACAGATCAACGGAAATTAAAG 57.866 36.000 0.00 0.00 0.00 1.85
360 361 6.710744 AGACACAGATCAACGGAAATTAAAGT 59.289 34.615 0.00 0.00 0.00 2.66
361 362 7.876068 AGACACAGATCAACGGAAATTAAAGTA 59.124 33.333 0.00 0.00 0.00 2.24
362 363 8.029642 ACACAGATCAACGGAAATTAAAGTAG 57.970 34.615 0.00 0.00 0.00 2.57
363 364 7.660208 ACACAGATCAACGGAAATTAAAGTAGT 59.340 33.333 0.00 0.00 0.00 2.73
364 365 8.504005 CACAGATCAACGGAAATTAAAGTAGTT 58.496 33.333 0.00 0.00 0.00 2.24
365 366 8.718734 ACAGATCAACGGAAATTAAAGTAGTTC 58.281 33.333 0.00 0.00 0.00 3.01
366 367 8.717821 CAGATCAACGGAAATTAAAGTAGTTCA 58.282 33.333 0.00 0.00 0.00 3.18
367 368 9.449719 AGATCAACGGAAATTAAAGTAGTTCAT 57.550 29.630 0.00 0.00 0.00 2.57
384 385 6.388435 AGTTCATACTACACGGGATTCTAC 57.612 41.667 0.00 0.00 31.21 2.59
385 386 6.127793 AGTTCATACTACACGGGATTCTACT 58.872 40.000 0.00 0.00 31.21 2.57
386 387 6.606395 AGTTCATACTACACGGGATTCTACTT 59.394 38.462 0.00 0.00 31.21 2.24
387 388 6.630444 TCATACTACACGGGATTCTACTTC 57.370 41.667 0.00 0.00 0.00 3.01
388 389 6.363065 TCATACTACACGGGATTCTACTTCT 58.637 40.000 0.00 0.00 0.00 2.85
389 390 7.512130 TCATACTACACGGGATTCTACTTCTA 58.488 38.462 0.00 0.00 0.00 2.10
390 391 7.994911 TCATACTACACGGGATTCTACTTCTAA 59.005 37.037 0.00 0.00 0.00 2.10
391 392 8.794553 CATACTACACGGGATTCTACTTCTAAT 58.205 37.037 0.00 0.00 0.00 1.73
392 393 7.040473 ACTACACGGGATTCTACTTCTAATG 57.960 40.000 0.00 0.00 0.00 1.90
393 394 4.694339 ACACGGGATTCTACTTCTAATGC 58.306 43.478 0.00 0.00 0.00 3.56
394 395 4.161565 ACACGGGATTCTACTTCTAATGCA 59.838 41.667 0.00 0.00 0.00 3.96
395 396 5.163301 ACACGGGATTCTACTTCTAATGCAT 60.163 40.000 0.00 0.00 0.00 3.96
396 397 6.041637 ACACGGGATTCTACTTCTAATGCATA 59.958 38.462 0.00 0.00 0.00 3.14
397 398 6.587990 CACGGGATTCTACTTCTAATGCATAG 59.412 42.308 0.00 0.00 0.00 2.23
398 399 6.102663 CGGGATTCTACTTCTAATGCATAGG 58.897 44.000 0.00 0.00 32.09 2.57
399 400 6.295349 CGGGATTCTACTTCTAATGCATAGGT 60.295 42.308 0.00 0.00 32.09 3.08
400 401 7.100409 GGGATTCTACTTCTAATGCATAGGTC 58.900 42.308 0.00 0.00 32.09 3.85
401 402 7.100409 GGATTCTACTTCTAATGCATAGGTCC 58.900 42.308 0.00 0.34 32.09 4.46
402 403 7.256332 GGATTCTACTTCTAATGCATAGGTCCA 60.256 40.741 0.00 0.00 32.09 4.02
403 404 7.432148 TTCTACTTCTAATGCATAGGTCCAA 57.568 36.000 0.00 0.00 32.09 3.53
404 405 7.055667 TCTACTTCTAATGCATAGGTCCAAG 57.944 40.000 0.00 0.00 32.09 3.61
405 406 5.041191 ACTTCTAATGCATAGGTCCAAGG 57.959 43.478 0.00 0.00 32.09 3.61
406 407 4.475016 ACTTCTAATGCATAGGTCCAAGGT 59.525 41.667 0.00 0.00 32.09 3.50
407 408 4.689612 TCTAATGCATAGGTCCAAGGTC 57.310 45.455 0.00 0.00 32.09 3.85
408 409 2.736670 AATGCATAGGTCCAAGGTCC 57.263 50.000 0.00 0.00 0.00 4.46
409 410 1.595311 ATGCATAGGTCCAAGGTCCA 58.405 50.000 0.00 0.00 0.00 4.02
410 411 1.367346 TGCATAGGTCCAAGGTCCAA 58.633 50.000 5.21 0.00 0.00 3.53
411 412 1.281867 TGCATAGGTCCAAGGTCCAAG 59.718 52.381 5.21 0.00 0.00 3.61
412 413 1.282157 GCATAGGTCCAAGGTCCAAGT 59.718 52.381 5.21 0.00 0.00 3.16
467 469 1.423921 CTACCAAGGTCCAAGTTGGGT 59.576 52.381 21.85 12.53 46.53 4.51
533 535 1.893315 TAGGCCCAAGGACATAGCTT 58.107 50.000 0.00 0.00 29.21 3.74
607 612 5.944599 TCTACACGATAACTTCTGGACTTCT 59.055 40.000 0.00 0.00 0.00 2.85
608 613 5.470047 ACACGATAACTTCTGGACTTCTT 57.530 39.130 0.00 0.00 0.00 2.52
792 798 4.157656 GCAGTTTTATGGCCATACTGACAA 59.842 41.667 35.71 21.89 0.00 3.18
799 805 3.111484 TGGCCATACTGACAAGACCATA 58.889 45.455 0.00 0.00 0.00 2.74
915 922 1.071814 GTCGTGGGTGGCCAAACTA 59.928 57.895 7.24 0.00 0.00 2.24
952 959 1.134128 TGCAAGCAAGTTCAGGAGTCA 60.134 47.619 0.00 0.00 0.00 3.41
1069 1077 1.522258 GTGACGCGACTTCCGTTAAAA 59.478 47.619 15.93 0.00 39.30 1.52
1200 1208 7.095910 TCTTTCGTAATAATGTTGTTCCGGTA 58.904 34.615 0.00 0.00 0.00 4.02
1407 1416 7.757097 ACTTCTAATGCATACTTGTTCTACG 57.243 36.000 0.00 0.00 0.00 3.51
1408 1417 6.255887 ACTTCTAATGCATACTTGTTCTACGC 59.744 38.462 0.00 0.00 0.00 4.42
1409 1418 3.925688 AATGCATACTTGTTCTACGCG 57.074 42.857 3.53 3.53 0.00 6.01
1410 1419 2.357327 TGCATACTTGTTCTACGCGT 57.643 45.000 19.17 19.17 0.00 6.01
1411 1420 2.256174 TGCATACTTGTTCTACGCGTC 58.744 47.619 18.63 0.56 0.00 5.19
1412 1421 2.094906 TGCATACTTGTTCTACGCGTCT 60.095 45.455 18.63 0.00 0.00 4.18
1413 1422 2.279136 GCATACTTGTTCTACGCGTCTG 59.721 50.000 18.63 10.84 0.00 3.51
1414 1423 1.973138 TACTTGTTCTACGCGTCTGC 58.027 50.000 18.63 5.47 37.91 4.26
1415 1424 0.031585 ACTTGTTCTACGCGTCTGCA 59.968 50.000 18.63 8.43 42.97 4.41
1416 1425 0.435008 CTTGTTCTACGCGTCTGCAC 59.565 55.000 18.63 11.57 42.97 4.57
1417 1426 0.942410 TTGTTCTACGCGTCTGCACC 60.942 55.000 18.63 0.20 42.97 5.01
1418 1427 2.126618 TTCTACGCGTCTGCACCG 60.127 61.111 18.63 0.00 42.97 4.94
1419 1428 3.620300 TTCTACGCGTCTGCACCGG 62.620 63.158 18.63 0.00 42.97 5.28
1420 1429 4.111016 CTACGCGTCTGCACCGGA 62.111 66.667 18.63 0.00 42.97 5.14
1421 1430 4.111016 TACGCGTCTGCACCGGAG 62.111 66.667 18.63 0.00 42.97 4.63
1465 1474 2.805353 CGACTCGTTGCCGTGGAG 60.805 66.667 0.00 0.00 35.01 3.86
1466 1475 2.338984 GACTCGTTGCCGTGGAGT 59.661 61.111 0.00 0.00 43.32 3.85
1467 1476 2.022129 GACTCGTTGCCGTGGAGTG 61.022 63.158 0.00 0.00 40.88 3.51
1468 1477 3.414700 CTCGTTGCCGTGGAGTGC 61.415 66.667 0.00 0.00 35.01 4.40
1471 1480 4.012895 GTTGCCGTGGAGTGCGTG 62.013 66.667 0.00 0.00 0.00 5.34
1474 1483 4.367023 GCCGTGGAGTGCGTGGTA 62.367 66.667 0.00 0.00 0.00 3.25
1475 1484 2.126071 CCGTGGAGTGCGTGGTAG 60.126 66.667 0.00 0.00 0.00 3.18
1476 1485 2.632544 CCGTGGAGTGCGTGGTAGA 61.633 63.158 0.00 0.00 0.00 2.59
1477 1486 1.511305 CGTGGAGTGCGTGGTAGAT 59.489 57.895 0.00 0.00 0.00 1.98
1478 1487 0.525668 CGTGGAGTGCGTGGTAGATC 60.526 60.000 0.00 0.00 0.00 2.75
1479 1488 0.530744 GTGGAGTGCGTGGTAGATCA 59.469 55.000 0.00 0.00 0.00 2.92
1480 1489 0.817654 TGGAGTGCGTGGTAGATCAG 59.182 55.000 0.00 0.00 0.00 2.90
1481 1490 0.103208 GGAGTGCGTGGTAGATCAGG 59.897 60.000 0.00 0.00 0.00 3.86
1482 1491 0.103208 GAGTGCGTGGTAGATCAGGG 59.897 60.000 0.00 0.00 0.00 4.45
1483 1492 0.614979 AGTGCGTGGTAGATCAGGGT 60.615 55.000 0.00 0.00 0.00 4.34
1484 1493 0.460284 GTGCGTGGTAGATCAGGGTG 60.460 60.000 0.00 0.00 0.00 4.61
1485 1494 1.521681 GCGTGGTAGATCAGGGTGC 60.522 63.158 0.00 0.00 0.00 5.01
1486 1495 1.961180 GCGTGGTAGATCAGGGTGCT 61.961 60.000 0.00 0.00 0.00 4.40
1487 1496 0.179100 CGTGGTAGATCAGGGTGCTG 60.179 60.000 0.00 0.00 0.00 4.41
1488 1497 0.179000 GTGGTAGATCAGGGTGCTGG 59.821 60.000 0.00 0.00 0.00 4.85
1489 1498 1.147153 GGTAGATCAGGGTGCTGGC 59.853 63.158 0.00 0.00 0.00 4.85
1490 1499 1.341156 GGTAGATCAGGGTGCTGGCT 61.341 60.000 0.00 0.00 0.00 4.75
1491 1500 0.543749 GTAGATCAGGGTGCTGGCTT 59.456 55.000 0.00 0.00 0.00 4.35
1492 1501 1.762957 GTAGATCAGGGTGCTGGCTTA 59.237 52.381 0.00 0.00 0.00 3.09
1493 1502 0.835941 AGATCAGGGTGCTGGCTTAG 59.164 55.000 0.00 0.00 0.00 2.18
1554 1564 6.638610 TGGATGCTTTTTCTGTTTTCTTCAA 58.361 32.000 0.00 0.00 0.00 2.69
1557 1567 6.036577 TGCTTTTTCTGTTTTCTTCAAGGT 57.963 33.333 0.00 0.00 0.00 3.50
1558 1568 7.164230 TGCTTTTTCTGTTTTCTTCAAGGTA 57.836 32.000 0.00 0.00 0.00 3.08
1573 1583 8.229253 TCTTCAAGGTAGTACGCTTGATATAA 57.771 34.615 23.42 14.02 36.24 0.98
1887 1951 7.226523 ACTTTTCAAAAATCTTTCCATTTCCGG 59.773 33.333 0.00 0.00 0.00 5.14
2080 2145 5.257082 TGGAACTTTTCAGGCAGTAAAAC 57.743 39.130 0.00 0.00 0.00 2.43
2142 2208 5.861787 ACTTAAAAATAACAGGCGCAATGTC 59.138 36.000 16.61 0.00 0.00 3.06
2166 2232 8.188799 GTCTACTTTTTGTTTTAAAGCTCAGGT 58.811 33.333 3.62 0.00 36.33 4.00
2179 2245 1.609320 GCTCAGGTCCAGTTGTCTTCC 60.609 57.143 0.00 0.00 0.00 3.46
2192 2258 6.416750 CCAGTTGTCTTCCGTGTTTATTTTTC 59.583 38.462 0.00 0.00 0.00 2.29
2224 2292 0.407528 TTGGTGGCTCCTATTTGGCA 59.592 50.000 7.19 0.00 37.07 4.92
2229 2297 0.815615 GGCTCCTATTTGGCACGAGG 60.816 60.000 0.00 2.72 35.26 4.63
2236 2304 1.779061 ATTTGGCACGAGGGACCTGT 61.779 55.000 0.00 0.00 0.00 4.00
2267 2335 3.000819 CCCCACCCGCACTCACTA 61.001 66.667 0.00 0.00 0.00 2.74
2268 2336 2.264794 CCCACCCGCACTCACTAC 59.735 66.667 0.00 0.00 0.00 2.73
2269 2337 2.126071 CCACCCGCACTCACTACG 60.126 66.667 0.00 0.00 0.00 3.51
2270 2338 2.649034 CACCCGCACTCACTACGT 59.351 61.111 0.00 0.00 0.00 3.57
2271 2339 1.588824 CCACCCGCACTCACTACGTA 61.589 60.000 0.00 0.00 0.00 3.57
2272 2340 0.455633 CACCCGCACTCACTACGTAC 60.456 60.000 0.00 0.00 0.00 3.67
2273 2341 0.890542 ACCCGCACTCACTACGTACA 60.891 55.000 0.00 0.00 0.00 2.90
2274 2342 0.454600 CCCGCACTCACTACGTACAT 59.545 55.000 0.00 0.00 0.00 2.29
2275 2343 1.672363 CCCGCACTCACTACGTACATA 59.328 52.381 0.00 0.00 0.00 2.29
2276 2344 2.540361 CCCGCACTCACTACGTACATAC 60.540 54.545 0.00 0.00 0.00 2.39
2277 2345 2.353889 CCGCACTCACTACGTACATACT 59.646 50.000 0.00 0.00 0.00 2.12
2278 2346 3.181503 CCGCACTCACTACGTACATACTT 60.182 47.826 0.00 0.00 0.00 2.24
2279 2347 4.409570 CGCACTCACTACGTACATACTTT 58.590 43.478 0.00 0.00 0.00 2.66
2280 2348 4.855388 CGCACTCACTACGTACATACTTTT 59.145 41.667 0.00 0.00 0.00 2.27
2281 2349 5.344128 CGCACTCACTACGTACATACTTTTT 59.656 40.000 0.00 0.00 0.00 1.94
2282 2350 6.524239 CGCACTCACTACGTACATACTTTTTA 59.476 38.462 0.00 0.00 0.00 1.52
2283 2351 7.060979 CGCACTCACTACGTACATACTTTTTAA 59.939 37.037 0.00 0.00 0.00 1.52
2284 2352 8.702438 GCACTCACTACGTACATACTTTTTAAA 58.298 33.333 0.00 0.00 0.00 1.52
2285 2353 9.999883 CACTCACTACGTACATACTTTTTAAAC 57.000 33.333 0.00 0.00 0.00 2.01
2286 2354 9.971922 ACTCACTACGTACATACTTTTTAAACT 57.028 29.630 0.00 0.00 0.00 2.66
2288 2356 9.748708 TCACTACGTACATACTTTTTAAACTGT 57.251 29.630 0.00 0.00 0.00 3.55
2289 2357 9.787626 CACTACGTACATACTTTTTAAACTGTG 57.212 33.333 0.00 0.00 0.00 3.66
2290 2358 8.490355 ACTACGTACATACTTTTTAAACTGTGC 58.510 33.333 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.347635 CACGAGTATAAGTGCAGCAACTAAA 59.652 40.000 0.00 0.00 0.00 1.85
1 2 4.862574 CACGAGTATAAGTGCAGCAACTAA 59.137 41.667 0.00 0.00 0.00 2.24
2 3 4.421058 CACGAGTATAAGTGCAGCAACTA 58.579 43.478 0.00 0.00 0.00 2.24
3 4 3.254060 CACGAGTATAAGTGCAGCAACT 58.746 45.455 0.00 0.00 0.00 3.16
4 5 2.348666 CCACGAGTATAAGTGCAGCAAC 59.651 50.000 0.00 0.00 37.07 4.17
5 6 2.232696 TCCACGAGTATAAGTGCAGCAA 59.767 45.455 0.00 0.00 37.07 3.91
6 7 1.822371 TCCACGAGTATAAGTGCAGCA 59.178 47.619 0.00 0.00 37.07 4.41
7 8 2.159226 ACTCCACGAGTATAAGTGCAGC 60.159 50.000 0.00 0.00 41.51 5.25
8 9 3.784701 ACTCCACGAGTATAAGTGCAG 57.215 47.619 0.00 0.00 41.51 4.41
9 10 4.011698 TGTACTCCACGAGTATAAGTGCA 58.988 43.478 4.90 0.00 45.21 4.57
10 11 4.627611 TGTACTCCACGAGTATAAGTGC 57.372 45.455 4.90 0.00 45.21 4.40
11 12 5.798934 GTGTTGTACTCCACGAGTATAAGTG 59.201 44.000 10.21 0.00 45.21 3.16
12 13 5.474532 TGTGTTGTACTCCACGAGTATAAGT 59.525 40.000 10.21 0.00 45.21 2.24
13 14 5.946298 TGTGTTGTACTCCACGAGTATAAG 58.054 41.667 10.21 0.00 45.21 1.73
14 15 5.963176 TGTGTTGTACTCCACGAGTATAA 57.037 39.130 4.90 5.96 45.21 0.98
15 16 5.963176 TTGTGTTGTACTCCACGAGTATA 57.037 39.130 4.90 0.00 45.21 1.47
16 17 4.859304 TTGTGTTGTACTCCACGAGTAT 57.141 40.909 4.90 0.00 45.21 2.12
17 18 4.613944 CTTTGTGTTGTACTCCACGAGTA 58.386 43.478 9.79 0.00 41.51 2.59
18 19 3.454375 CTTTGTGTTGTACTCCACGAGT 58.546 45.455 9.79 0.00 45.54 4.18
19 20 2.221055 GCTTTGTGTTGTACTCCACGAG 59.779 50.000 9.79 10.49 34.28 4.18
20 21 2.206750 GCTTTGTGTTGTACTCCACGA 58.793 47.619 9.79 6.27 34.28 4.35
21 22 1.937223 TGCTTTGTGTTGTACTCCACG 59.063 47.619 9.79 0.00 34.28 4.94
22 23 4.568152 ATTGCTTTGTGTTGTACTCCAC 57.432 40.909 8.10 8.10 0.00 4.02
23 24 5.126779 TGTATTGCTTTGTGTTGTACTCCA 58.873 37.500 0.00 0.00 0.00 3.86
24 25 5.682943 TGTATTGCTTTGTGTTGTACTCC 57.317 39.130 0.00 0.00 0.00 3.85
25 26 7.860373 TCATTTGTATTGCTTTGTGTTGTACTC 59.140 33.333 0.00 0.00 0.00 2.59
26 27 7.647715 GTCATTTGTATTGCTTTGTGTTGTACT 59.352 33.333 0.00 0.00 0.00 2.73
27 28 7.647715 AGTCATTTGTATTGCTTTGTGTTGTAC 59.352 33.333 0.00 0.00 0.00 2.90
28 29 7.647318 CAGTCATTTGTATTGCTTTGTGTTGTA 59.353 33.333 0.00 0.00 0.00 2.41
29 30 6.476380 CAGTCATTTGTATTGCTTTGTGTTGT 59.524 34.615 0.00 0.00 0.00 3.32
30 31 6.562640 GCAGTCATTTGTATTGCTTTGTGTTG 60.563 38.462 0.00 0.00 0.00 3.33
31 32 5.463061 GCAGTCATTTGTATTGCTTTGTGTT 59.537 36.000 0.00 0.00 0.00 3.32
32 33 4.984161 GCAGTCATTTGTATTGCTTTGTGT 59.016 37.500 0.00 0.00 0.00 3.72
33 34 4.983538 TGCAGTCATTTGTATTGCTTTGTG 59.016 37.500 0.00 0.00 35.85 3.33
34 35 5.199024 TGCAGTCATTTGTATTGCTTTGT 57.801 34.783 0.00 0.00 35.85 2.83
35 36 6.715344 ATTGCAGTCATTTGTATTGCTTTG 57.285 33.333 0.00 0.00 35.85 2.77
36 37 7.117236 CAGAATTGCAGTCATTTGTATTGCTTT 59.883 33.333 2.68 0.00 35.85 3.51
37 38 6.588756 CAGAATTGCAGTCATTTGTATTGCTT 59.411 34.615 2.68 0.00 35.85 3.91
38 39 6.097356 CAGAATTGCAGTCATTTGTATTGCT 58.903 36.000 2.68 0.00 35.85 3.91
39 40 5.865552 ACAGAATTGCAGTCATTTGTATTGC 59.134 36.000 2.68 0.00 35.42 3.56
40 41 7.219535 GCTACAGAATTGCAGTCATTTGTATTG 59.780 37.037 2.68 0.00 0.00 1.90
41 42 7.094248 TGCTACAGAATTGCAGTCATTTGTATT 60.094 33.333 2.68 0.00 33.87 1.89
42 43 6.375174 TGCTACAGAATTGCAGTCATTTGTAT 59.625 34.615 2.68 0.00 33.87 2.29
43 44 5.704978 TGCTACAGAATTGCAGTCATTTGTA 59.295 36.000 2.68 2.45 33.87 2.41
44 45 4.520111 TGCTACAGAATTGCAGTCATTTGT 59.480 37.500 2.68 1.52 33.87 2.83
45 46 5.050644 TGCTACAGAATTGCAGTCATTTG 57.949 39.130 2.68 0.00 33.87 2.32
53 54 2.205022 AAGGCTGCTACAGAATTGCA 57.795 45.000 0.00 0.00 36.66 4.08
54 55 2.751806 AGAAAGGCTGCTACAGAATTGC 59.248 45.455 0.00 0.00 32.44 3.56
55 56 4.456911 TGAAGAAAGGCTGCTACAGAATTG 59.543 41.667 0.00 0.00 32.44 2.32
56 57 4.655963 TGAAGAAAGGCTGCTACAGAATT 58.344 39.130 0.00 0.00 32.44 2.17
57 58 4.019860 TCTGAAGAAAGGCTGCTACAGAAT 60.020 41.667 0.00 0.00 32.44 2.40
58 59 3.324846 TCTGAAGAAAGGCTGCTACAGAA 59.675 43.478 0.00 0.00 32.44 3.02
59 60 2.899900 TCTGAAGAAAGGCTGCTACAGA 59.100 45.455 0.00 0.00 32.44 3.41
60 61 2.999355 GTCTGAAGAAAGGCTGCTACAG 59.001 50.000 0.00 0.00 34.12 2.74
61 62 2.634940 AGTCTGAAGAAAGGCTGCTACA 59.365 45.455 0.00 0.00 28.71 2.74
62 63 2.999355 CAGTCTGAAGAAAGGCTGCTAC 59.001 50.000 0.00 0.00 42.57 3.58
63 64 2.027745 CCAGTCTGAAGAAAGGCTGCTA 60.028 50.000 0.00 0.00 46.48 3.49
64 65 1.271271 CCAGTCTGAAGAAAGGCTGCT 60.271 52.381 0.00 0.00 46.48 4.24
65 66 1.163554 CCAGTCTGAAGAAAGGCTGC 58.836 55.000 0.00 0.00 46.48 5.25
67 68 2.439507 TGTTCCAGTCTGAAGAAAGGCT 59.560 45.455 0.00 0.00 30.27 4.58
68 69 2.851195 TGTTCCAGTCTGAAGAAAGGC 58.149 47.619 0.00 0.00 0.00 4.35
69 70 6.234177 AGTATTGTTCCAGTCTGAAGAAAGG 58.766 40.000 0.00 0.00 32.15 3.11
70 71 7.736447 AAGTATTGTTCCAGTCTGAAGAAAG 57.264 36.000 0.00 0.00 32.15 2.62
71 72 8.519799 AAAAGTATTGTTCCAGTCTGAAGAAA 57.480 30.769 0.00 0.00 32.15 2.52
72 73 8.519799 AAAAAGTATTGTTCCAGTCTGAAGAA 57.480 30.769 0.00 0.00 32.82 2.52
73 74 7.993183 AGAAAAAGTATTGTTCCAGTCTGAAGA 59.007 33.333 0.00 0.00 0.00 2.87
74 75 8.159344 AGAAAAAGTATTGTTCCAGTCTGAAG 57.841 34.615 0.00 0.00 0.00 3.02
75 76 8.519799 AAGAAAAAGTATTGTTCCAGTCTGAA 57.480 30.769 0.00 0.00 0.00 3.02
76 77 7.773224 TGAAGAAAAAGTATTGTTCCAGTCTGA 59.227 33.333 0.00 0.00 33.05 3.27
77 78 7.930217 TGAAGAAAAAGTATTGTTCCAGTCTG 58.070 34.615 0.00 0.00 33.05 3.51
78 79 7.993183 TCTGAAGAAAAAGTATTGTTCCAGTCT 59.007 33.333 0.00 0.00 33.05 3.24
79 80 8.154649 TCTGAAGAAAAAGTATTGTTCCAGTC 57.845 34.615 0.00 0.00 33.05 3.51
80 81 8.697507 ATCTGAAGAAAAAGTATTGTTCCAGT 57.302 30.769 0.00 0.00 33.05 4.00
86 87 9.678260 AGCTGATATCTGAAGAAAAAGTATTGT 57.322 29.630 13.33 0.00 0.00 2.71
89 90 9.896645 TCAAGCTGATATCTGAAGAAAAAGTAT 57.103 29.630 13.33 0.00 0.00 2.12
90 91 9.155975 GTCAAGCTGATATCTGAAGAAAAAGTA 57.844 33.333 13.33 0.00 0.00 2.24
91 92 7.120432 GGTCAAGCTGATATCTGAAGAAAAAGT 59.880 37.037 13.33 0.00 0.00 2.66
92 93 7.414984 GGGTCAAGCTGATATCTGAAGAAAAAG 60.415 40.741 13.33 0.00 0.00 2.27
93 94 6.375455 GGGTCAAGCTGATATCTGAAGAAAAA 59.625 38.462 13.33 0.00 0.00 1.94
94 95 5.882557 GGGTCAAGCTGATATCTGAAGAAAA 59.117 40.000 13.33 0.00 0.00 2.29
95 96 5.045651 TGGGTCAAGCTGATATCTGAAGAAA 60.046 40.000 13.33 0.00 0.00 2.52
96 97 4.471025 TGGGTCAAGCTGATATCTGAAGAA 59.529 41.667 13.33 0.00 0.00 2.52
97 98 4.033009 TGGGTCAAGCTGATATCTGAAGA 58.967 43.478 13.33 4.77 0.00 2.87
98 99 4.412796 TGGGTCAAGCTGATATCTGAAG 57.587 45.455 13.33 0.00 0.00 3.02
99 100 4.019411 TGTTGGGTCAAGCTGATATCTGAA 60.019 41.667 13.33 0.00 0.00 3.02
100 101 3.519107 TGTTGGGTCAAGCTGATATCTGA 59.481 43.478 13.33 1.25 0.00 3.27
101 102 3.624861 GTGTTGGGTCAAGCTGATATCTG 59.375 47.826 3.98 4.68 0.00 2.90
102 103 3.370953 GGTGTTGGGTCAAGCTGATATCT 60.371 47.826 3.98 0.00 0.00 1.98
103 104 2.945668 GGTGTTGGGTCAAGCTGATATC 59.054 50.000 0.00 0.00 0.00 1.63
104 105 2.357154 GGGTGTTGGGTCAAGCTGATAT 60.357 50.000 0.00 0.00 0.00 1.63
105 106 1.004277 GGGTGTTGGGTCAAGCTGATA 59.996 52.381 0.00 0.00 0.00 2.15
106 107 0.251341 GGGTGTTGGGTCAAGCTGAT 60.251 55.000 0.00 0.00 0.00 2.90
107 108 1.150536 GGGTGTTGGGTCAAGCTGA 59.849 57.895 0.00 0.00 0.00 4.26
108 109 2.260869 CGGGTGTTGGGTCAAGCTG 61.261 63.158 0.00 0.00 0.00 4.24
109 110 1.779061 ATCGGGTGTTGGGTCAAGCT 61.779 55.000 0.00 0.00 0.00 3.74
110 111 1.303317 ATCGGGTGTTGGGTCAAGC 60.303 57.895 0.00 0.00 0.00 4.01
111 112 0.960364 CCATCGGGTGTTGGGTCAAG 60.960 60.000 0.00 0.00 32.28 3.02
112 113 1.074072 CCATCGGGTGTTGGGTCAA 59.926 57.895 0.00 0.00 32.28 3.18
113 114 1.419720 TTCCATCGGGTGTTGGGTCA 61.420 55.000 0.00 0.00 35.92 4.02
114 115 0.958876 GTTCCATCGGGTGTTGGGTC 60.959 60.000 0.00 0.00 35.92 4.46
115 116 1.074248 GTTCCATCGGGTGTTGGGT 59.926 57.895 0.00 0.00 35.92 4.51
116 117 0.538516 TTGTTCCATCGGGTGTTGGG 60.539 55.000 0.00 0.00 35.92 4.12
117 118 0.596082 GTTGTTCCATCGGGTGTTGG 59.404 55.000 0.00 0.00 36.46 3.77
118 119 1.001815 GTGTTGTTCCATCGGGTGTTG 60.002 52.381 0.00 0.00 34.93 3.33
119 120 1.133915 AGTGTTGTTCCATCGGGTGTT 60.134 47.619 0.00 0.00 34.93 3.32
120 121 0.472471 AGTGTTGTTCCATCGGGTGT 59.528 50.000 0.00 0.00 34.93 4.16
121 122 1.535462 GAAGTGTTGTTCCATCGGGTG 59.465 52.381 0.00 0.00 34.93 4.61
122 123 1.142060 TGAAGTGTTGTTCCATCGGGT 59.858 47.619 0.00 0.00 34.93 5.28
123 124 1.806542 CTGAAGTGTTGTTCCATCGGG 59.193 52.381 0.00 0.00 0.00 5.14
124 125 2.738846 CTCTGAAGTGTTGTTCCATCGG 59.261 50.000 0.00 0.00 0.00 4.18
125 126 3.653344 TCTCTGAAGTGTTGTTCCATCG 58.347 45.455 0.00 0.00 0.00 3.84
126 127 4.633565 GGATCTCTGAAGTGTTGTTCCATC 59.366 45.833 0.00 0.00 0.00 3.51
127 128 4.566488 GGGATCTCTGAAGTGTTGTTCCAT 60.566 45.833 0.00 0.00 0.00 3.41
128 129 3.244561 GGGATCTCTGAAGTGTTGTTCCA 60.245 47.826 0.00 0.00 0.00 3.53
129 130 3.008485 AGGGATCTCTGAAGTGTTGTTCC 59.992 47.826 0.00 0.00 0.00 3.62
130 131 4.249661 GAGGGATCTCTGAAGTGTTGTTC 58.750 47.826 0.00 0.00 37.07 3.18
131 132 3.648067 TGAGGGATCTCTGAAGTGTTGTT 59.352 43.478 0.00 0.00 40.58 2.83
132 133 3.242867 TGAGGGATCTCTGAAGTGTTGT 58.757 45.455 0.00 0.00 40.58 3.32
133 134 3.969287 TGAGGGATCTCTGAAGTGTTG 57.031 47.619 0.00 0.00 40.58 3.33
134 135 4.382470 CGATTGAGGGATCTCTGAAGTGTT 60.382 45.833 0.00 0.00 40.58 3.32
135 136 3.131933 CGATTGAGGGATCTCTGAAGTGT 59.868 47.826 0.00 0.00 40.58 3.55
136 137 3.382865 TCGATTGAGGGATCTCTGAAGTG 59.617 47.826 0.00 0.00 40.58 3.16
137 138 3.383185 GTCGATTGAGGGATCTCTGAAGT 59.617 47.826 0.00 0.00 40.58 3.01
138 139 3.243704 GGTCGATTGAGGGATCTCTGAAG 60.244 52.174 0.00 0.00 40.58 3.02
139 140 2.695666 GGTCGATTGAGGGATCTCTGAA 59.304 50.000 0.00 0.00 40.58 3.02
140 141 2.311463 GGTCGATTGAGGGATCTCTGA 58.689 52.381 0.00 0.00 40.58 3.27
141 142 1.000827 CGGTCGATTGAGGGATCTCTG 60.001 57.143 0.00 0.00 40.58 3.35
142 143 1.133761 TCGGTCGATTGAGGGATCTCT 60.134 52.381 0.00 0.00 40.58 3.10
143 144 1.268352 CTCGGTCGATTGAGGGATCTC 59.732 57.143 8.55 0.00 40.36 2.75
144 145 1.323412 CTCGGTCGATTGAGGGATCT 58.677 55.000 8.55 0.00 0.00 2.75
145 146 0.319125 GCTCGGTCGATTGAGGGATC 60.319 60.000 15.86 0.00 32.78 3.36
146 147 1.742768 GCTCGGTCGATTGAGGGAT 59.257 57.895 15.86 0.00 32.78 3.85
147 148 2.423898 GGCTCGGTCGATTGAGGGA 61.424 63.158 15.86 0.00 32.78 4.20
148 149 2.107141 GGCTCGGTCGATTGAGGG 59.893 66.667 15.86 0.00 32.78 4.30
149 150 2.278857 CGGCTCGGTCGATTGAGG 60.279 66.667 15.86 0.54 29.41 3.86
150 151 2.956964 GCGGCTCGGTCGATTGAG 60.957 66.667 11.35 11.35 29.41 3.02
151 152 3.699955 CTGCGGCTCGGTCGATTGA 62.700 63.158 0.00 0.00 29.41 2.57
152 153 3.257561 CTGCGGCTCGGTCGATTG 61.258 66.667 0.00 0.00 29.41 2.67
153 154 2.501223 TTTCTGCGGCTCGGTCGATT 62.501 55.000 0.00 0.00 29.41 3.34
154 155 2.298158 ATTTCTGCGGCTCGGTCGAT 62.298 55.000 0.00 0.00 29.41 3.59
155 156 2.884087 GATTTCTGCGGCTCGGTCGA 62.884 60.000 0.00 0.00 29.41 4.20
156 157 2.509336 ATTTCTGCGGCTCGGTCG 60.509 61.111 0.00 0.00 0.00 4.79
157 158 2.517450 CGATTTCTGCGGCTCGGTC 61.517 63.158 0.00 0.00 0.00 4.79
158 159 2.509336 CGATTTCTGCGGCTCGGT 60.509 61.111 0.00 0.00 0.00 4.69
159 160 1.635663 AAACGATTTCTGCGGCTCGG 61.636 55.000 12.24 0.00 35.52 4.63
160 161 0.996462 TAAACGATTTCTGCGGCTCG 59.004 50.000 0.00 4.16 37.17 5.03
161 162 1.266891 CGTAAACGATTTCTGCGGCTC 60.267 52.381 0.00 0.00 43.02 4.70
162 163 0.719465 CGTAAACGATTTCTGCGGCT 59.281 50.000 0.00 0.00 43.02 5.52
163 164 0.247537 CCGTAAACGATTTCTGCGGC 60.248 55.000 3.65 0.00 43.02 6.53
164 165 0.372334 CCCGTAAACGATTTCTGCGG 59.628 55.000 3.65 0.00 43.02 5.69
165 166 0.247537 GCCCGTAAACGATTTCTGCG 60.248 55.000 3.65 0.00 43.02 5.18
166 167 1.062148 GAGCCCGTAAACGATTTCTGC 59.938 52.381 3.65 0.00 43.02 4.26
167 168 1.664151 GGAGCCCGTAAACGATTTCTG 59.336 52.381 3.65 0.00 43.02 3.02
168 169 1.406477 GGGAGCCCGTAAACGATTTCT 60.406 52.381 3.65 0.00 43.02 2.52
169 170 1.012086 GGGAGCCCGTAAACGATTTC 58.988 55.000 3.65 0.00 43.02 2.17
170 171 3.164026 GGGAGCCCGTAAACGATTT 57.836 52.632 3.65 0.00 43.02 2.17
171 172 4.948257 GGGAGCCCGTAAACGATT 57.052 55.556 3.65 0.00 43.02 3.34
181 182 2.124277 AATTCTGTTTACGGGAGCCC 57.876 50.000 0.00 0.00 0.00 5.19
182 183 4.611310 GTAAATTCTGTTTACGGGAGCC 57.389 45.455 0.00 0.00 0.00 4.70
189 190 3.002102 TCGGCCCGTAAATTCTGTTTAC 58.998 45.455 1.63 1.60 0.00 2.01
190 191 3.002102 GTCGGCCCGTAAATTCTGTTTA 58.998 45.455 1.63 0.00 0.00 2.01
191 192 1.808343 GTCGGCCCGTAAATTCTGTTT 59.192 47.619 1.63 0.00 0.00 2.83
192 193 1.270947 TGTCGGCCCGTAAATTCTGTT 60.271 47.619 1.63 0.00 0.00 3.16
193 194 0.322322 TGTCGGCCCGTAAATTCTGT 59.678 50.000 1.63 0.00 0.00 3.41
194 195 1.330521 CATGTCGGCCCGTAAATTCTG 59.669 52.381 1.63 0.00 0.00 3.02
195 196 1.663695 CATGTCGGCCCGTAAATTCT 58.336 50.000 1.63 0.00 0.00 2.40
196 197 0.028902 GCATGTCGGCCCGTAAATTC 59.971 55.000 1.63 0.00 0.00 2.17
197 198 2.103410 GCATGTCGGCCCGTAAATT 58.897 52.632 1.63 0.00 0.00 1.82
198 199 3.821995 GCATGTCGGCCCGTAAAT 58.178 55.556 1.63 0.00 0.00 1.40
206 207 4.408821 TCCCAGTGGCATGTCGGC 62.409 66.667 2.61 0.00 41.67 5.54
207 208 2.436646 GTCCCAGTGGCATGTCGG 60.437 66.667 2.61 0.00 0.00 4.79
208 209 2.034879 GTGTCCCAGTGGCATGTCG 61.035 63.158 2.61 0.00 0.00 4.35
209 210 0.537143 TTGTGTCCCAGTGGCATGTC 60.537 55.000 2.61 0.00 0.00 3.06
210 211 0.112995 ATTGTGTCCCAGTGGCATGT 59.887 50.000 2.61 0.00 0.00 3.21
211 212 2.019249 CTATTGTGTCCCAGTGGCATG 58.981 52.381 2.61 0.00 0.00 4.06
212 213 1.915489 TCTATTGTGTCCCAGTGGCAT 59.085 47.619 2.61 0.00 0.00 4.40
213 214 1.357137 TCTATTGTGTCCCAGTGGCA 58.643 50.000 2.61 0.00 0.00 4.92
214 215 2.565841 GATCTATTGTGTCCCAGTGGC 58.434 52.381 2.61 0.00 0.00 5.01
215 216 3.199880 GGATCTATTGTGTCCCAGTGG 57.800 52.381 0.63 0.63 0.00 4.00
220 221 0.468226 TGCGGGATCTATTGTGTCCC 59.532 55.000 9.21 9.21 46.63 4.46
221 222 2.550830 ATGCGGGATCTATTGTGTCC 57.449 50.000 0.00 0.00 0.00 4.02
222 223 6.573434 TGATATATGCGGGATCTATTGTGTC 58.427 40.000 0.00 0.00 0.00 3.67
223 224 6.544928 TGATATATGCGGGATCTATTGTGT 57.455 37.500 0.00 0.00 0.00 3.72
224 225 7.212274 TGATGATATATGCGGGATCTATTGTG 58.788 38.462 0.00 0.00 0.00 3.33
225 226 7.288621 TCTGATGATATATGCGGGATCTATTGT 59.711 37.037 0.00 0.00 0.00 2.71
226 227 7.664758 TCTGATGATATATGCGGGATCTATTG 58.335 38.462 0.00 0.00 0.00 1.90
227 228 7.846101 TCTGATGATATATGCGGGATCTATT 57.154 36.000 0.00 0.00 0.00 1.73
228 229 7.846101 TTCTGATGATATATGCGGGATCTAT 57.154 36.000 0.00 0.00 0.00 1.98
229 230 7.846101 ATTCTGATGATATATGCGGGATCTA 57.154 36.000 0.00 0.00 0.00 1.98
230 231 6.744175 ATTCTGATGATATATGCGGGATCT 57.256 37.500 0.00 0.00 0.00 2.75
231 232 6.988580 TGAATTCTGATGATATATGCGGGATC 59.011 38.462 7.05 0.00 0.00 3.36
232 233 6.892485 TGAATTCTGATGATATATGCGGGAT 58.108 36.000 7.05 0.00 0.00 3.85
233 234 6.298441 TGAATTCTGATGATATATGCGGGA 57.702 37.500 7.05 0.00 0.00 5.14
234 235 6.372381 TGTTGAATTCTGATGATATATGCGGG 59.628 38.462 7.05 0.00 0.00 6.13
235 236 7.239271 GTGTTGAATTCTGATGATATATGCGG 58.761 38.462 7.05 0.00 0.00 5.69
236 237 6.952083 CGTGTTGAATTCTGATGATATATGCG 59.048 38.462 7.05 0.00 0.00 4.73
237 238 8.021955 TCGTGTTGAATTCTGATGATATATGC 57.978 34.615 7.05 0.00 0.00 3.14
241 242 9.112725 TGAAATCGTGTTGAATTCTGATGATAT 57.887 29.630 7.05 0.00 37.39 1.63
242 243 8.491331 TGAAATCGTGTTGAATTCTGATGATA 57.509 30.769 7.05 0.00 37.39 2.15
243 244 7.381766 TGAAATCGTGTTGAATTCTGATGAT 57.618 32.000 7.05 4.29 37.39 2.45
244 245 6.799926 TGAAATCGTGTTGAATTCTGATGA 57.200 33.333 7.05 2.14 37.39 2.92
245 246 7.856492 TTTGAAATCGTGTTGAATTCTGATG 57.144 32.000 7.05 0.00 37.39 3.07
246 247 8.755018 GTTTTTGAAATCGTGTTGAATTCTGAT 58.245 29.630 7.05 0.23 37.39 2.90
247 248 7.973388 AGTTTTTGAAATCGTGTTGAATTCTGA 59.027 29.630 7.05 0.00 37.39 3.27
248 249 8.118893 AGTTTTTGAAATCGTGTTGAATTCTG 57.881 30.769 7.05 0.00 37.39 3.02
249 250 9.450807 CTAGTTTTTGAAATCGTGTTGAATTCT 57.549 29.630 7.05 0.00 37.39 2.40
250 251 9.233232 ACTAGTTTTTGAAATCGTGTTGAATTC 57.767 29.630 0.00 0.00 37.08 2.17
252 253 9.878599 CTACTAGTTTTTGAAATCGTGTTGAAT 57.121 29.630 0.00 0.00 0.00 2.57
253 254 8.885722 ACTACTAGTTTTTGAAATCGTGTTGAA 58.114 29.630 0.00 0.00 0.00 2.69
254 255 8.428186 ACTACTAGTTTTTGAAATCGTGTTGA 57.572 30.769 0.00 0.00 0.00 3.18
255 256 9.498307 AAACTACTAGTTTTTGAAATCGTGTTG 57.502 29.630 0.00 0.00 45.38 3.33
256 257 9.498307 CAAACTACTAGTTTTTGAAATCGTGTT 57.502 29.630 18.40 0.00 45.38 3.32
257 258 7.642586 GCAAACTACTAGTTTTTGAAATCGTGT 59.357 33.333 23.87 0.00 45.38 4.49
258 259 7.149351 CGCAAACTACTAGTTTTTGAAATCGTG 60.149 37.037 23.87 2.22 45.38 4.35
259 260 6.849305 CGCAAACTACTAGTTTTTGAAATCGT 59.151 34.615 23.87 0.00 45.38 3.73
260 261 6.183359 GCGCAAACTACTAGTTTTTGAAATCG 60.183 38.462 23.87 19.26 45.38 3.34
261 262 6.087687 GGCGCAAACTACTAGTTTTTGAAATC 59.912 38.462 23.87 11.47 45.38 2.17
262 263 5.918576 GGCGCAAACTACTAGTTTTTGAAAT 59.081 36.000 23.87 0.00 45.38 2.17
263 264 5.163642 TGGCGCAAACTACTAGTTTTTGAAA 60.164 36.000 23.87 9.87 45.38 2.69
264 265 4.335874 TGGCGCAAACTACTAGTTTTTGAA 59.664 37.500 23.87 10.11 45.38 2.69
265 266 3.878103 TGGCGCAAACTACTAGTTTTTGA 59.122 39.130 23.87 8.38 45.38 2.69
266 267 4.217754 TGGCGCAAACTACTAGTTTTTG 57.782 40.909 10.83 18.70 45.38 2.44
267 268 6.563222 TTATGGCGCAAACTACTAGTTTTT 57.437 33.333 10.83 0.00 45.38 1.94
268 269 6.753107 ATTATGGCGCAAACTACTAGTTTT 57.247 33.333 10.83 0.00 45.38 2.43
270 271 6.753107 AAATTATGGCGCAAACTACTAGTT 57.247 33.333 10.83 0.00 40.80 2.24
271 272 6.819649 TGTAAATTATGGCGCAAACTACTAGT 59.180 34.615 10.83 0.00 0.00 2.57
272 273 7.241663 TGTAAATTATGGCGCAAACTACTAG 57.758 36.000 10.83 0.00 0.00 2.57
273 274 7.496263 TGATGTAAATTATGGCGCAAACTACTA 59.504 33.333 10.83 0.00 0.00 1.82
274 275 6.317642 TGATGTAAATTATGGCGCAAACTACT 59.682 34.615 10.83 0.00 0.00 2.57
275 276 6.413818 GTGATGTAAATTATGGCGCAAACTAC 59.586 38.462 10.83 6.62 0.00 2.73
276 277 6.459024 GGTGATGTAAATTATGGCGCAAACTA 60.459 38.462 10.83 0.00 0.00 2.24
277 278 5.339990 GTGATGTAAATTATGGCGCAAACT 58.660 37.500 10.83 0.00 0.00 2.66
278 279 4.502645 GGTGATGTAAATTATGGCGCAAAC 59.497 41.667 10.83 0.00 0.00 2.93
279 280 4.677584 GGTGATGTAAATTATGGCGCAAA 58.322 39.130 10.83 0.00 0.00 3.68
280 281 3.242903 CGGTGATGTAAATTATGGCGCAA 60.243 43.478 10.83 0.00 0.00 4.85
281 282 2.289274 CGGTGATGTAAATTATGGCGCA 59.711 45.455 10.83 0.00 0.00 6.09
282 283 2.350388 CCGGTGATGTAAATTATGGCGC 60.350 50.000 0.00 0.00 0.00 6.53
283 284 3.135225 TCCGGTGATGTAAATTATGGCG 58.865 45.455 0.00 0.00 0.00 5.69
284 285 4.134563 ACTCCGGTGATGTAAATTATGGC 58.865 43.478 11.17 0.00 0.00 4.40
285 286 5.238650 GGAACTCCGGTGATGTAAATTATGG 59.761 44.000 11.17 0.00 0.00 2.74
286 287 5.820423 TGGAACTCCGGTGATGTAAATTATG 59.180 40.000 11.17 0.00 39.43 1.90
287 288 5.996644 TGGAACTCCGGTGATGTAAATTAT 58.003 37.500 11.17 0.00 39.43 1.28
288 289 5.423704 TGGAACTCCGGTGATGTAAATTA 57.576 39.130 11.17 0.00 39.43 1.40
289 290 4.295141 TGGAACTCCGGTGATGTAAATT 57.705 40.909 11.17 0.00 39.43 1.82
290 291 3.992943 TGGAACTCCGGTGATGTAAAT 57.007 42.857 11.17 0.00 39.43 1.40
291 292 3.773418 TTGGAACTCCGGTGATGTAAA 57.227 42.857 11.17 0.00 39.43 2.01
292 293 3.181453 TGTTTGGAACTCCGGTGATGTAA 60.181 43.478 11.17 0.00 39.43 2.41
293 294 2.369203 TGTTTGGAACTCCGGTGATGTA 59.631 45.455 11.17 0.00 39.43 2.29
294 295 1.142060 TGTTTGGAACTCCGGTGATGT 59.858 47.619 11.17 0.00 39.43 3.06
295 296 1.890876 TGTTTGGAACTCCGGTGATG 58.109 50.000 11.17 0.00 39.43 3.07
296 297 2.879103 ATGTTTGGAACTCCGGTGAT 57.121 45.000 11.17 0.00 39.43 3.06
297 298 2.635915 ACTATGTTTGGAACTCCGGTGA 59.364 45.455 11.17 0.00 39.43 4.02
298 299 2.742053 CACTATGTTTGGAACTCCGGTG 59.258 50.000 0.00 0.00 39.43 4.94
299 300 2.874457 GCACTATGTTTGGAACTCCGGT 60.874 50.000 0.00 0.00 39.43 5.28
300 301 1.737793 GCACTATGTTTGGAACTCCGG 59.262 52.381 0.00 0.00 39.43 5.14
301 302 2.422597 TGCACTATGTTTGGAACTCCG 58.577 47.619 0.00 0.00 39.43 4.63
302 303 4.941263 TGTATGCACTATGTTTGGAACTCC 59.059 41.667 0.00 0.00 0.00 3.85
303 304 6.494893 TTGTATGCACTATGTTTGGAACTC 57.505 37.500 0.00 0.00 0.00 3.01
304 305 5.106157 GCTTGTATGCACTATGTTTGGAACT 60.106 40.000 0.00 0.00 0.00 3.01
305 306 5.095490 GCTTGTATGCACTATGTTTGGAAC 58.905 41.667 0.00 0.00 0.00 3.62
306 307 5.009631 AGCTTGTATGCACTATGTTTGGAA 58.990 37.500 0.00 0.00 34.99 3.53
307 308 4.588899 AGCTTGTATGCACTATGTTTGGA 58.411 39.130 0.00 0.00 34.99 3.53
308 309 4.970662 AGCTTGTATGCACTATGTTTGG 57.029 40.909 0.00 0.00 34.99 3.28
309 310 8.915871 AATTAAGCTTGTATGCACTATGTTTG 57.084 30.769 9.86 0.00 34.99 2.93
311 312 9.613428 TCTAATTAAGCTTGTATGCACTATGTT 57.387 29.630 9.86 0.00 34.99 2.71
312 313 9.046296 GTCTAATTAAGCTTGTATGCACTATGT 57.954 33.333 9.86 0.00 34.99 2.29
313 314 9.045223 TGTCTAATTAAGCTTGTATGCACTATG 57.955 33.333 9.86 0.00 34.99 2.23
314 315 9.046296 GTGTCTAATTAAGCTTGTATGCACTAT 57.954 33.333 9.86 0.00 34.99 2.12
315 316 8.038351 TGTGTCTAATTAAGCTTGTATGCACTA 58.962 33.333 9.86 0.00 34.99 2.74
316 317 6.878923 TGTGTCTAATTAAGCTTGTATGCACT 59.121 34.615 9.86 0.00 34.99 4.40
317 318 7.064609 TCTGTGTCTAATTAAGCTTGTATGCAC 59.935 37.037 9.86 9.77 34.99 4.57
318 319 7.102993 TCTGTGTCTAATTAAGCTTGTATGCA 58.897 34.615 9.86 0.00 34.99 3.96
319 320 7.539712 TCTGTGTCTAATTAAGCTTGTATGC 57.460 36.000 9.86 0.00 0.00 3.14
320 321 9.317936 TGATCTGTGTCTAATTAAGCTTGTATG 57.682 33.333 9.86 0.00 0.00 2.39
321 322 9.890629 TTGATCTGTGTCTAATTAAGCTTGTAT 57.109 29.630 9.86 0.00 0.00 2.29
322 323 9.151471 GTTGATCTGTGTCTAATTAAGCTTGTA 57.849 33.333 9.86 0.00 0.00 2.41
323 324 7.148573 CGTTGATCTGTGTCTAATTAAGCTTGT 60.149 37.037 9.86 0.00 0.00 3.16
324 325 7.176075 CGTTGATCTGTGTCTAATTAAGCTTG 58.824 38.462 9.86 0.00 0.00 4.01
325 326 6.313905 CCGTTGATCTGTGTCTAATTAAGCTT 59.686 38.462 3.48 3.48 0.00 3.74
326 327 5.812642 CCGTTGATCTGTGTCTAATTAAGCT 59.187 40.000 0.00 0.00 0.00 3.74
327 328 5.810587 TCCGTTGATCTGTGTCTAATTAAGC 59.189 40.000 0.00 0.00 0.00 3.09
328 329 7.827819 TTCCGTTGATCTGTGTCTAATTAAG 57.172 36.000 0.00 0.00 0.00 1.85
329 330 8.786826 ATTTCCGTTGATCTGTGTCTAATTAA 57.213 30.769 0.00 0.00 0.00 1.40
330 331 8.786826 AATTTCCGTTGATCTGTGTCTAATTA 57.213 30.769 0.00 0.00 0.00 1.40
331 332 7.687941 AATTTCCGTTGATCTGTGTCTAATT 57.312 32.000 0.00 0.00 0.00 1.40
332 333 8.786826 TTAATTTCCGTTGATCTGTGTCTAAT 57.213 30.769 0.00 0.00 0.00 1.73
333 334 8.610248 TTTAATTTCCGTTGATCTGTGTCTAA 57.390 30.769 0.00 0.00 0.00 2.10
334 335 7.876068 ACTTTAATTTCCGTTGATCTGTGTCTA 59.124 33.333 0.00 0.00 0.00 2.59
335 336 6.710744 ACTTTAATTTCCGTTGATCTGTGTCT 59.289 34.615 0.00 0.00 0.00 3.41
336 337 6.899114 ACTTTAATTTCCGTTGATCTGTGTC 58.101 36.000 0.00 0.00 0.00 3.67
337 338 6.877611 ACTTTAATTTCCGTTGATCTGTGT 57.122 33.333 0.00 0.00 0.00 3.72
338 339 8.029642 ACTACTTTAATTTCCGTTGATCTGTG 57.970 34.615 0.00 0.00 0.00 3.66
339 340 8.617290 AACTACTTTAATTTCCGTTGATCTGT 57.383 30.769 0.00 0.00 0.00 3.41
340 341 8.717821 TGAACTACTTTAATTTCCGTTGATCTG 58.282 33.333 0.00 0.00 0.00 2.90
341 342 8.842358 TGAACTACTTTAATTTCCGTTGATCT 57.158 30.769 0.00 0.00 0.00 2.75
344 345 9.715121 AGTATGAACTACTTTAATTTCCGTTGA 57.285 29.630 0.00 0.00 37.39 3.18
360 361 7.285566 AGTAGAATCCCGTGTAGTATGAACTA 58.714 38.462 0.00 0.00 37.15 2.24
361 362 6.127793 AGTAGAATCCCGTGTAGTATGAACT 58.872 40.000 0.00 0.00 39.91 3.01
362 363 6.388435 AGTAGAATCCCGTGTAGTATGAAC 57.612 41.667 0.00 0.00 0.00 3.18
363 364 6.832384 AGAAGTAGAATCCCGTGTAGTATGAA 59.168 38.462 0.00 0.00 0.00 2.57
364 365 6.363065 AGAAGTAGAATCCCGTGTAGTATGA 58.637 40.000 0.00 0.00 0.00 2.15
365 366 6.636562 AGAAGTAGAATCCCGTGTAGTATG 57.363 41.667 0.00 0.00 0.00 2.39
366 367 8.794553 CATTAGAAGTAGAATCCCGTGTAGTAT 58.205 37.037 0.00 0.00 0.00 2.12
367 368 7.255381 GCATTAGAAGTAGAATCCCGTGTAGTA 60.255 40.741 0.00 0.00 0.00 1.82
368 369 6.461231 GCATTAGAAGTAGAATCCCGTGTAGT 60.461 42.308 0.00 0.00 0.00 2.73
369 370 5.921408 GCATTAGAAGTAGAATCCCGTGTAG 59.079 44.000 0.00 0.00 0.00 2.74
370 371 5.361571 TGCATTAGAAGTAGAATCCCGTGTA 59.638 40.000 0.00 0.00 0.00 2.90
371 372 4.161565 TGCATTAGAAGTAGAATCCCGTGT 59.838 41.667 0.00 0.00 0.00 4.49
372 373 4.693283 TGCATTAGAAGTAGAATCCCGTG 58.307 43.478 0.00 0.00 0.00 4.94
373 374 5.552870 ATGCATTAGAAGTAGAATCCCGT 57.447 39.130 0.00 0.00 0.00 5.28
374 375 6.102663 CCTATGCATTAGAAGTAGAATCCCG 58.897 44.000 3.54 0.00 0.00 5.14
375 376 7.010339 ACCTATGCATTAGAAGTAGAATCCC 57.990 40.000 3.54 0.00 0.00 3.85
376 377 7.100409 GGACCTATGCATTAGAAGTAGAATCC 58.900 42.308 3.54 1.54 0.00 3.01
377 378 7.671302 TGGACCTATGCATTAGAAGTAGAATC 58.329 38.462 3.54 0.00 0.00 2.52
378 379 7.618019 TGGACCTATGCATTAGAAGTAGAAT 57.382 36.000 3.54 0.00 0.00 2.40
379 380 7.419057 CCTTGGACCTATGCATTAGAAGTAGAA 60.419 40.741 3.54 0.00 0.00 2.10
380 381 6.042093 CCTTGGACCTATGCATTAGAAGTAGA 59.958 42.308 3.54 0.00 0.00 2.59
381 382 6.183361 ACCTTGGACCTATGCATTAGAAGTAG 60.183 42.308 3.54 0.00 0.00 2.57
382 383 5.665812 ACCTTGGACCTATGCATTAGAAGTA 59.334 40.000 3.54 0.00 0.00 2.24
383 384 4.475016 ACCTTGGACCTATGCATTAGAAGT 59.525 41.667 3.54 0.00 0.00 3.01
384 385 5.041191 ACCTTGGACCTATGCATTAGAAG 57.959 43.478 3.54 0.00 0.00 2.85
385 386 4.141482 GGACCTTGGACCTATGCATTAGAA 60.141 45.833 3.54 0.00 0.00 2.10
386 387 3.391296 GGACCTTGGACCTATGCATTAGA 59.609 47.826 3.54 0.00 0.00 2.10
387 388 3.136443 TGGACCTTGGACCTATGCATTAG 59.864 47.826 3.54 0.00 0.00 1.73
388 389 3.119319 TGGACCTTGGACCTATGCATTA 58.881 45.455 3.54 0.00 0.00 1.90
389 390 1.922447 TGGACCTTGGACCTATGCATT 59.078 47.619 3.54 0.00 0.00 3.56
390 391 1.595311 TGGACCTTGGACCTATGCAT 58.405 50.000 3.79 3.79 0.00 3.96
391 392 1.281867 CTTGGACCTTGGACCTATGCA 59.718 52.381 9.35 0.00 0.00 3.96
392 393 1.282157 ACTTGGACCTTGGACCTATGC 59.718 52.381 9.35 0.00 0.00 3.14
393 394 3.721087 AACTTGGACCTTGGACCTATG 57.279 47.619 9.35 2.97 0.00 2.23
394 395 3.397955 ACAAACTTGGACCTTGGACCTAT 59.602 43.478 9.35 0.00 0.00 2.57
395 396 2.781174 ACAAACTTGGACCTTGGACCTA 59.219 45.455 9.35 1.52 0.00 3.08
396 397 1.569072 ACAAACTTGGACCTTGGACCT 59.431 47.619 9.35 0.00 0.00 3.85
397 398 1.681264 CACAAACTTGGACCTTGGACC 59.319 52.381 1.27 1.27 0.00 4.46
398 399 2.650322 TCACAAACTTGGACCTTGGAC 58.350 47.619 0.00 0.00 0.00 4.02
399 400 3.117701 TCATCACAAACTTGGACCTTGGA 60.118 43.478 0.00 0.00 0.00 3.53
400 401 3.004734 GTCATCACAAACTTGGACCTTGG 59.995 47.826 0.00 0.00 0.00 3.61
401 402 3.631686 TGTCATCACAAACTTGGACCTTG 59.368 43.478 0.00 0.00 0.00 3.61
402 403 3.897239 TGTCATCACAAACTTGGACCTT 58.103 40.909 0.00 0.00 0.00 3.50
403 404 3.576078 TGTCATCACAAACTTGGACCT 57.424 42.857 0.00 0.00 0.00 3.85
404 405 4.278170 TCATTGTCATCACAAACTTGGACC 59.722 41.667 0.00 0.00 45.78 4.46
405 406 5.215160 GTCATTGTCATCACAAACTTGGAC 58.785 41.667 0.00 0.00 45.78 4.02
406 407 4.278170 GGTCATTGTCATCACAAACTTGGA 59.722 41.667 0.00 0.00 45.78 3.53
407 408 4.549458 GGTCATTGTCATCACAAACTTGG 58.451 43.478 0.00 0.00 45.78 3.61
408 409 4.024133 TCGGTCATTGTCATCACAAACTTG 60.024 41.667 0.00 0.00 45.78 3.16
409 410 4.133820 TCGGTCATTGTCATCACAAACTT 58.866 39.130 0.00 0.00 45.78 2.66
410 411 3.738982 TCGGTCATTGTCATCACAAACT 58.261 40.909 0.00 0.00 45.78 2.66
411 412 3.745975 TCTCGGTCATTGTCATCACAAAC 59.254 43.478 0.00 0.00 45.78 2.93
412 413 4.001618 TCTCGGTCATTGTCATCACAAA 57.998 40.909 0.00 0.00 45.78 2.83
533 535 6.697395 TCTTCGACAAGTCATAGATTTTGGA 58.303 36.000 0.72 0.00 0.00 3.53
607 612 3.526899 TCCCTGAAGAATGTCCACCTAA 58.473 45.455 0.00 0.00 0.00 2.69
608 613 3.199442 TCCCTGAAGAATGTCCACCTA 57.801 47.619 0.00 0.00 0.00 3.08
775 781 3.521531 TGGTCTTGTCAGTATGGCCATAA 59.478 43.478 27.04 11.45 42.68 1.90
792 798 5.505780 TCCAAATGGTCGAAATTATGGTCT 58.494 37.500 15.21 0.00 36.34 3.85
799 805 6.165577 CCAAATCTTCCAAATGGTCGAAATT 58.834 36.000 0.00 0.00 36.34 1.82
915 922 4.399303 GCTTGCATAGTGGACAAAGGTTAT 59.601 41.667 0.00 0.00 0.00 1.89
1191 1199 1.300971 CGACGACTCCTACCGGAACA 61.301 60.000 9.46 0.00 39.29 3.18
1200 1208 0.322277 TCCTAGCAACGACGACTCCT 60.322 55.000 0.00 0.00 0.00 3.69
1386 1395 4.738252 CGCGTAGAACAAGTATGCATTAGA 59.262 41.667 3.54 0.00 32.78 2.10
1387 1396 4.503007 ACGCGTAGAACAAGTATGCATTAG 59.497 41.667 11.67 0.00 32.78 1.73
1388 1397 4.426416 ACGCGTAGAACAAGTATGCATTA 58.574 39.130 11.67 0.00 32.78 1.90
1389 1398 3.259064 ACGCGTAGAACAAGTATGCATT 58.741 40.909 11.67 0.00 32.78 3.56
1390 1399 2.858344 GACGCGTAGAACAAGTATGCAT 59.142 45.455 13.97 3.79 32.78 3.96
1391 1400 2.094906 AGACGCGTAGAACAAGTATGCA 60.095 45.455 13.97 0.00 32.78 3.96
1392 1401 2.279136 CAGACGCGTAGAACAAGTATGC 59.721 50.000 13.97 0.00 0.00 3.14
1393 1402 2.279136 GCAGACGCGTAGAACAAGTATG 59.721 50.000 13.97 0.00 0.00 2.39
1394 1403 2.094906 TGCAGACGCGTAGAACAAGTAT 60.095 45.455 13.97 0.00 42.97 2.12
1395 1404 1.267533 TGCAGACGCGTAGAACAAGTA 59.732 47.619 13.97 0.00 42.97 2.24
1396 1405 0.031585 TGCAGACGCGTAGAACAAGT 59.968 50.000 13.97 0.00 42.97 3.16
1397 1406 0.435008 GTGCAGACGCGTAGAACAAG 59.565 55.000 13.97 0.00 42.97 3.16
1398 1407 0.942410 GGTGCAGACGCGTAGAACAA 60.942 55.000 13.97 0.00 42.97 2.83
1399 1408 1.372499 GGTGCAGACGCGTAGAACA 60.372 57.895 13.97 5.58 42.97 3.18
1400 1409 2.434134 CGGTGCAGACGCGTAGAAC 61.434 63.158 13.97 13.12 42.97 3.01
1401 1410 2.126618 CGGTGCAGACGCGTAGAA 60.127 61.111 13.97 0.00 42.97 2.10
1402 1411 4.111016 CCGGTGCAGACGCGTAGA 62.111 66.667 13.97 0.00 42.97 2.59
1403 1412 4.111016 TCCGGTGCAGACGCGTAG 62.111 66.667 13.97 9.63 42.97 3.51
1404 1413 4.111016 CTCCGGTGCAGACGCGTA 62.111 66.667 13.97 0.00 42.97 4.42
1454 1463 4.012895 CACGCACTCCACGGCAAC 62.013 66.667 0.00 0.00 34.00 4.17
1457 1466 4.367023 TACCACGCACTCCACGGC 62.367 66.667 0.00 0.00 34.00 5.68
1458 1467 1.945354 ATCTACCACGCACTCCACGG 61.945 60.000 0.00 0.00 34.00 4.94
1459 1468 0.525668 GATCTACCACGCACTCCACG 60.526 60.000 0.00 0.00 0.00 4.94
1460 1469 0.530744 TGATCTACCACGCACTCCAC 59.469 55.000 0.00 0.00 0.00 4.02
1461 1470 0.817654 CTGATCTACCACGCACTCCA 59.182 55.000 0.00 0.00 0.00 3.86
1462 1471 0.103208 CCTGATCTACCACGCACTCC 59.897 60.000 0.00 0.00 0.00 3.85
1463 1472 0.103208 CCCTGATCTACCACGCACTC 59.897 60.000 0.00 0.00 0.00 3.51
1464 1473 0.614979 ACCCTGATCTACCACGCACT 60.615 55.000 0.00 0.00 0.00 4.40
1465 1474 0.460284 CACCCTGATCTACCACGCAC 60.460 60.000 0.00 0.00 0.00 5.34
1466 1475 1.897423 CACCCTGATCTACCACGCA 59.103 57.895 0.00 0.00 0.00 5.24
1467 1476 1.521681 GCACCCTGATCTACCACGC 60.522 63.158 0.00 0.00 0.00 5.34
1468 1477 0.179100 CAGCACCCTGATCTACCACG 60.179 60.000 0.00 0.00 41.77 4.94
1469 1478 0.179000 CCAGCACCCTGATCTACCAC 59.821 60.000 0.00 0.00 41.77 4.16
1470 1479 1.626356 GCCAGCACCCTGATCTACCA 61.626 60.000 0.00 0.00 41.77 3.25
1471 1480 1.147153 GCCAGCACCCTGATCTACC 59.853 63.158 0.00 0.00 41.77 3.18
1472 1481 0.543749 AAGCCAGCACCCTGATCTAC 59.456 55.000 0.00 0.00 41.77 2.59
1473 1482 2.042464 CTAAGCCAGCACCCTGATCTA 58.958 52.381 0.00 0.00 41.77 1.98
1474 1483 0.835941 CTAAGCCAGCACCCTGATCT 59.164 55.000 0.00 0.00 41.77 2.75
1475 1484 3.393472 CTAAGCCAGCACCCTGATC 57.607 57.895 0.00 0.00 41.77 2.92
1488 1497 1.809684 AGTTCGAAACCTGGCTAAGC 58.190 50.000 0.00 0.00 0.00 3.09
1489 1498 2.742589 GGAAGTTCGAAACCTGGCTAAG 59.257 50.000 0.00 0.00 0.00 2.18
1490 1499 2.551504 GGGAAGTTCGAAACCTGGCTAA 60.552 50.000 0.00 0.00 0.00 3.09
1491 1500 1.002773 GGGAAGTTCGAAACCTGGCTA 59.997 52.381 0.00 0.00 0.00 3.93
1492 1501 0.250770 GGGAAGTTCGAAACCTGGCT 60.251 55.000 0.00 0.00 0.00 4.75
1493 1502 1.574702 CGGGAAGTTCGAAACCTGGC 61.575 60.000 0.00 0.00 0.00 4.85
1494 1503 1.574702 GCGGGAAGTTCGAAACCTGG 61.575 60.000 20.21 12.62 0.00 4.45
1495 1504 1.866925 GCGGGAAGTTCGAAACCTG 59.133 57.895 16.73 16.73 0.00 4.00
1496 1505 1.666872 CGCGGGAAGTTCGAAACCT 60.667 57.895 0.00 0.00 0.00 3.50
1497 1506 2.858158 CGCGGGAAGTTCGAAACC 59.142 61.111 0.00 4.03 0.00 3.27
1498 1507 2.172659 GCGCGGGAAGTTCGAAAC 59.827 61.111 8.83 0.00 0.00 2.78
1499 1508 3.408020 CGCGCGGGAAGTTCGAAA 61.408 61.111 24.84 0.00 0.00 3.46
1554 1564 8.571336 ACGTTATTTATATCAAGCGTACTACCT 58.429 33.333 0.00 0.00 0.00 3.08
1557 1567 9.734620 ACAACGTTATTTATATCAAGCGTACTA 57.265 29.630 0.00 0.00 0.00 1.82
1558 1568 8.638685 ACAACGTTATTTATATCAAGCGTACT 57.361 30.769 0.00 0.00 0.00 2.73
1573 1583 4.457466 ACAGTGGAAAGGACAACGTTATT 58.543 39.130 0.00 0.00 0.00 1.40
1576 1586 2.413310 ACAGTGGAAAGGACAACGTT 57.587 45.000 0.00 0.00 0.00 3.99
1577 1587 2.433239 AGTACAGTGGAAAGGACAACGT 59.567 45.455 0.00 0.00 0.00 3.99
1611 1623 0.790495 CACGCGCGTACTCGAAAGTA 60.790 55.000 37.24 0.00 39.71 2.24
1613 1625 2.681666 CACGCGCGTACTCGAAAG 59.318 61.111 37.24 17.08 39.71 2.62
1671 1683 6.073548 AGCATTTGCATCTTATTAGTAGCGAC 60.074 38.462 5.20 0.00 45.16 5.19
1822 1884 8.532186 TGTATATTGTGGCCAGTATTTGATTT 57.468 30.769 5.11 0.00 0.00 2.17
1823 1885 8.532186 TTGTATATTGTGGCCAGTATTTGATT 57.468 30.769 5.11 0.00 0.00 2.57
1824 1886 8.532186 TTTGTATATTGTGGCCAGTATTTGAT 57.468 30.769 5.11 0.00 0.00 2.57
1874 1938 5.988561 TGAACAAAAATCCGGAAATGGAAAG 59.011 36.000 9.01 0.00 42.46 2.62
1975 2040 2.094258 CGTGGTTGCATGTGACAGATAC 59.906 50.000 0.00 0.00 0.00 2.24
1981 2046 4.097714 CAATATTCGTGGTTGCATGTGAC 58.902 43.478 0.00 0.00 0.00 3.67
2142 2208 7.648112 GGACCTGAGCTTTAAAACAAAAAGTAG 59.352 37.037 0.00 0.00 36.52 2.57
2166 2232 2.702592 AAACACGGAAGACAACTGGA 57.297 45.000 0.00 0.00 0.00 3.86
2179 2245 3.879427 TGAGCACGGAAAAATAAACACG 58.121 40.909 0.00 0.00 0.00 4.49
2209 2276 0.107703 CTCGTGCCAAATAGGAGCCA 60.108 55.000 0.00 0.00 41.22 4.75
2224 2292 2.426023 GCACAACAGGTCCCTCGT 59.574 61.111 0.00 0.00 0.00 4.18
2229 2297 2.597510 GGGGTGCACAACAGGTCC 60.598 66.667 20.43 8.37 0.00 4.46
2250 2318 3.000819 TAGTGAGTGCGGGTGGGG 61.001 66.667 0.00 0.00 0.00 4.96
2251 2319 2.264794 GTAGTGAGTGCGGGTGGG 59.735 66.667 0.00 0.00 0.00 4.61
2252 2320 1.588824 TACGTAGTGAGTGCGGGTGG 61.589 60.000 2.37 0.00 45.73 4.61
2253 2321 0.455633 GTACGTAGTGAGTGCGGGTG 60.456 60.000 2.37 0.00 45.73 4.61
2254 2322 0.890542 TGTACGTAGTGAGTGCGGGT 60.891 55.000 2.37 0.00 45.73 5.28
2255 2323 0.454600 ATGTACGTAGTGAGTGCGGG 59.545 55.000 2.37 0.00 45.73 6.13
2256 2324 2.353889 AGTATGTACGTAGTGAGTGCGG 59.646 50.000 2.37 0.00 45.73 5.69
2257 2325 3.670311 AGTATGTACGTAGTGAGTGCG 57.330 47.619 0.00 0.00 45.73 5.34
2258 2326 6.701432 AAAAAGTATGTACGTAGTGAGTGC 57.299 37.500 3.15 0.00 45.73 4.40
2259 2327 9.999883 GTTTAAAAAGTATGTACGTAGTGAGTG 57.000 33.333 3.15 0.00 45.73 3.51
2260 2328 9.971922 AGTTTAAAAAGTATGTACGTAGTGAGT 57.028 29.630 3.15 0.00 45.73 3.41
2262 2330 9.748708 ACAGTTTAAAAAGTATGTACGTAGTGA 57.251 29.630 3.15 0.00 45.73 3.41
2263 2331 9.787626 CACAGTTTAAAAAGTATGTACGTAGTG 57.212 33.333 3.15 0.00 45.73 2.74
2265 2333 8.855330 GCACAGTTTAAAAAGTATGTACGTAG 57.145 34.615 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.