Multiple sequence alignment - TraesCS1B01G075300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G075300 chr1B 100.000 3794 0 0 1 3794 58329038 58325245 0.000000e+00 7007.0
1 TraesCS1B01G075300 chr1B 86.821 2671 316 18 171 2825 57791828 57789178 0.000000e+00 2950.0
2 TraesCS1B01G075300 chr1A 91.777 2955 202 24 1 2940 37505684 37502756 0.000000e+00 4072.0
3 TraesCS1B01G075300 chr1A 85.138 2530 351 18 310 2822 36613124 36615645 0.000000e+00 2566.0
4 TraesCS1B01G075300 chr1A 90.183 438 39 4 2945 3381 37501997 37501563 5.500000e-158 568.0
5 TraesCS1B01G075300 chr1A 86.290 124 10 2 3634 3757 308812375 308812491 1.110000e-25 128.0
6 TraesCS1B01G075300 chr1D 91.031 2832 218 17 1 2809 38584385 38581567 0.000000e+00 3790.0
7 TraesCS1B01G075300 chr1D 88.913 2760 271 25 131 2864 38368275 38365525 0.000000e+00 3369.0
8 TraesCS1B01G075300 chr1D 87.570 2687 304 18 153 2825 38259890 38257220 0.000000e+00 3085.0
9 TraesCS1B01G075300 chr1D 94.672 1952 103 1 989 2940 38559673 38557723 0.000000e+00 3027.0
10 TraesCS1B01G075300 chr1D 85.862 2426 335 8 381 2803 36624586 36622166 0.000000e+00 2573.0
11 TraesCS1B01G075300 chr1D 85.353 2492 343 12 328 2803 36618239 36615754 0.000000e+00 2560.0
12 TraesCS1B01G075300 chr1D 89.571 863 69 9 109 962 38560518 38559668 0.000000e+00 1075.0
13 TraesCS1B01G075300 chr1D 87.879 429 40 6 2945 3372 38556997 38556580 9.470000e-136 494.0
14 TraesCS1B01G075300 chr1D 87.097 124 9 2 3634 3757 236807723 236807607 2.380000e-27 134.0
15 TraesCS1B01G075300 chr1D 95.556 45 1 1 3396 3440 38554157 38554114 1.890000e-08 71.3
16 TraesCS1B01G075300 chr4A 97.727 44 1 0 3751 3794 154922126 154922169 4.060000e-10 76.8
17 TraesCS1B01G075300 chr2B 95.745 47 2 0 3748 3794 104827209 104827255 4.060000e-10 76.8
18 TraesCS1B01G075300 chr2B 90.196 51 5 0 3744 3794 2136330 2136380 2.450000e-07 67.6
19 TraesCS1B01G075300 chr7B 100.000 39 0 0 3756 3794 77434234 77434196 5.260000e-09 73.1
20 TraesCS1B01G075300 chr2D 100.000 39 0 0 3756 3794 309085424 309085386 5.260000e-09 73.1
21 TraesCS1B01G075300 chr7D 95.349 43 1 1 3752 3794 107073131 107073090 2.450000e-07 67.6
22 TraesCS1B01G075300 chr5A 95.349 43 1 1 3752 3794 598048265 598048306 2.450000e-07 67.6
23 TraesCS1B01G075300 chr7A 97.368 38 1 0 3755 3792 86246528 86246565 8.800000e-07 65.8
24 TraesCS1B01G075300 chr3B 100.000 35 0 0 3760 3794 202579051 202579017 8.800000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G075300 chr1B 58325245 58329038 3793 True 7007.000 7007 100.0000 1 3794 1 chr1B.!!$R2 3793
1 TraesCS1B01G075300 chr1B 57789178 57791828 2650 True 2950.000 2950 86.8210 171 2825 1 chr1B.!!$R1 2654
2 TraesCS1B01G075300 chr1A 36613124 36615645 2521 False 2566.000 2566 85.1380 310 2822 1 chr1A.!!$F1 2512
3 TraesCS1B01G075300 chr1A 37501563 37505684 4121 True 2320.000 4072 90.9800 1 3381 2 chr1A.!!$R1 3380
4 TraesCS1B01G075300 chr1D 38581567 38584385 2818 True 3790.000 3790 91.0310 1 2809 1 chr1D.!!$R3 2808
5 TraesCS1B01G075300 chr1D 38365525 38368275 2750 True 3369.000 3369 88.9130 131 2864 1 chr1D.!!$R2 2733
6 TraesCS1B01G075300 chr1D 38257220 38259890 2670 True 3085.000 3085 87.5700 153 2825 1 chr1D.!!$R1 2672
7 TraesCS1B01G075300 chr1D 36615754 36624586 8832 True 2566.500 2573 85.6075 328 2803 2 chr1D.!!$R5 2475
8 TraesCS1B01G075300 chr1D 38554114 38560518 6404 True 1166.825 3027 91.9195 109 3440 4 chr1D.!!$R6 3331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
558 6593 0.036875 CTCCCTCAACGGCTTCCTTT 59.963 55.0 0.00 0.0 0.00 3.11 F
2005 8048 0.179073 CTTAGTCGGCCAGATGGGTG 60.179 60.0 2.24 0.0 39.65 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2449 8492 0.328258 ACCAACCCACTGGCTGATAC 59.672 55.0 0.0 0.0 40.45 2.24 R
3759 12956 0.036306 ACCCTGCCTAACCGAACAAG 59.964 55.0 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.856115 AAATTTGTCAAAGTTTGGCACG 57.144 36.364 22.06 0.00 46.32 5.34
127 135 1.320507 GGGACTGGATACTCCTCGTC 58.679 60.000 7.31 7.31 37.46 4.20
175 183 2.267006 CAGAGCACGCCCATGTCT 59.733 61.111 0.00 0.00 0.00 3.41
237 284 2.435120 TAGACAGTGTCCGGCCTCCA 62.435 60.000 19.71 0.00 32.18 3.86
291 387 3.710722 CCTCTGCCTCCGCCACTT 61.711 66.667 0.00 0.00 0.00 3.16
373 6400 1.264749 CCGATGTTCCACCTCCTCCA 61.265 60.000 0.00 0.00 0.00 3.86
558 6593 0.036875 CTCCCTCAACGGCTTCCTTT 59.963 55.000 0.00 0.00 0.00 3.11
654 6695 0.179111 CGTATGCCGAGAAGAAGCCA 60.179 55.000 0.00 0.00 39.56 4.75
658 6699 2.665000 CCGAGAAGAAGCCAGCCA 59.335 61.111 0.00 0.00 0.00 4.75
766 6807 4.082523 CGGCCGCTTCCTCAGGAA 62.083 66.667 14.67 5.84 39.66 3.36
820 6861 0.322975 TTCCTCAAGTGCCTCTGCTC 59.677 55.000 0.00 0.00 38.71 4.26
869 6910 0.841961 TGCTGCTTCATAGGATGCCT 59.158 50.000 12.08 0.00 42.00 4.75
957 6998 4.057428 GTCAGCGGGCACTCGACT 62.057 66.667 0.00 0.00 0.00 4.18
962 7003 2.571757 CGGGCACTCGACTTGCTA 59.428 61.111 12.75 0.00 40.07 3.49
967 7008 1.341606 GCACTCGACTTGCTACAGAC 58.658 55.000 6.96 0.00 37.00 3.51
968 7009 1.068194 GCACTCGACTTGCTACAGACT 60.068 52.381 6.96 0.00 37.00 3.24
1031 7072 4.805272 GCATATAGCACAGTCATCCATGGT 60.805 45.833 12.58 0.00 44.79 3.55
1124 7165 3.390135 CTGATGTGGTGACGTACAACTT 58.610 45.455 0.00 0.00 37.08 2.66
1155 7196 2.338015 ATTGTGCAAGGCCAGAGCG 61.338 57.895 5.01 0.00 41.24 5.03
1170 7211 0.391661 GAGCGATGGACAAGGCAGAA 60.392 55.000 0.00 0.00 0.00 3.02
1527 7568 2.446435 AGCAATGGTTTTGTAGCCGAT 58.554 42.857 0.00 0.00 0.00 4.18
1687 7729 2.124736 GATTGCGTAGGCTGGCCA 60.125 61.111 14.39 4.71 40.82 5.36
2005 8048 0.179073 CTTAGTCGGCCAGATGGGTG 60.179 60.000 2.24 0.00 39.65 4.61
2074 8117 9.899661 AGCCTAATGTTGTTACATATAGTTCAA 57.100 29.630 0.00 0.00 44.14 2.69
2494 8537 5.864474 CCTAATGCTTCTACTTACGGCATAG 59.136 44.000 0.00 0.00 41.85 2.23
2704 8747 5.424121 TGAAGCTTCAACTACTTCTTTGC 57.576 39.130 26.61 0.00 40.36 3.68
2848 8891 5.523188 CAGCATTGTTGAACCTTTTGCTTTA 59.477 36.000 8.13 0.00 36.87 1.85
2882 8925 6.351711 CCTCCTGCCAGTATAAGATATCCAAG 60.352 46.154 0.00 0.00 0.00 3.61
2922 8965 9.099454 GAAAGTAGATCCGTCACTATTTCATTT 57.901 33.333 0.00 0.00 0.00 2.32
2940 8983 5.483811 TCATTTAGTTCATTCTGCGGTGTA 58.516 37.500 0.00 0.00 0.00 2.90
2941 8984 5.580691 TCATTTAGTTCATTCTGCGGTGTAG 59.419 40.000 0.00 0.00 0.00 2.74
2943 9740 3.678056 AGTTCATTCTGCGGTGTAGAA 57.322 42.857 0.00 0.00 38.49 2.10
2953 9750 1.852942 CGGTGTAGAATGGTCATCCG 58.147 55.000 0.00 0.00 36.30 4.18
2960 9757 1.153369 AATGGTCATCCGGTGCTCG 60.153 57.895 0.00 0.00 36.30 5.03
2967 9764 1.445582 ATCCGGTGCTCGACGTTTC 60.446 57.895 0.00 0.00 42.43 2.78
2968 9765 1.874345 ATCCGGTGCTCGACGTTTCT 61.874 55.000 0.00 0.00 42.43 2.52
3008 9805 2.029844 GTGGGACGAAGCACTGCTC 61.030 63.158 3.40 0.00 38.25 4.26
3023 9820 2.664185 CTCCCAGCATCGCATCGG 60.664 66.667 0.00 0.00 0.00 4.18
3043 9840 0.947180 TTCGCTGTGTTTACGCCTCC 60.947 55.000 0.00 0.00 0.00 4.30
3046 9843 1.373435 CTGTGTTTACGCCTCCCCA 59.627 57.895 0.00 0.00 0.00 4.96
3055 9852 2.592993 CGCCTCCCCACTTCAGGAA 61.593 63.158 0.00 0.00 0.00 3.36
3070 9867 7.869937 CCACTTCAGGAACTCACATATATACAG 59.130 40.741 0.00 0.00 34.60 2.74
3084 9881 1.944177 ATACAGTGAGGAGTGTGCCT 58.056 50.000 0.00 0.00 42.17 4.75
3096 9893 2.189521 GTGCCTCCACCATACCCG 59.810 66.667 0.00 0.00 35.92 5.28
3099 9896 1.451387 GCCTCCACCATACCCGTTG 60.451 63.158 0.00 0.00 0.00 4.10
3111 9908 1.192803 ACCCGTTGGTCTCCCTCTTC 61.193 60.000 0.00 0.00 43.06 2.87
3112 9909 1.597461 CCGTTGGTCTCCCTCTTCC 59.403 63.158 0.00 0.00 0.00 3.46
3113 9910 0.905337 CCGTTGGTCTCCCTCTTCCT 60.905 60.000 0.00 0.00 0.00 3.36
3114 9911 0.247736 CGTTGGTCTCCCTCTTCCTG 59.752 60.000 0.00 0.00 0.00 3.86
3122 9919 2.158158 TCTCCCTCTTCCTGTTCCTCAA 60.158 50.000 0.00 0.00 0.00 3.02
3124 9921 3.260205 TCCCTCTTCCTGTTCCTCAAAT 58.740 45.455 0.00 0.00 0.00 2.32
3126 9923 3.265479 CCCTCTTCCTGTTCCTCAAATCT 59.735 47.826 0.00 0.00 0.00 2.40
3169 9967 7.335422 AGTGTAATCTGAAAATAGCAGAAGGTG 59.665 37.037 0.00 0.00 44.71 4.00
3173 9971 3.084039 TGAAAATAGCAGAAGGTGGCTG 58.916 45.455 0.00 0.00 41.25 4.85
3213 10011 3.216800 GCTTAATCATGGATGGACAGCA 58.783 45.455 0.00 0.00 0.00 4.41
3238 10036 5.495502 CGCTTAGACGTAAACTGTGTTTTT 58.504 37.500 0.94 0.00 0.00 1.94
3241 10039 7.795272 CGCTTAGACGTAAACTGTGTTTTTAAT 59.205 33.333 0.94 0.00 0.00 1.40
3310 10108 7.344612 TGGAAATATGGAACTCTAGAAGTAGCA 59.655 37.037 0.00 0.00 37.17 3.49
3327 10125 1.295423 CAGTAGGTGGTTGTCCCGG 59.705 63.158 0.00 0.00 35.15 5.73
3333 10131 0.604511 GGTGGTTGTCCCGGTAACTG 60.605 60.000 0.00 0.00 35.15 3.16
3376 10174 5.587289 TGTTGCTGAAACTTTGGTTACATC 58.413 37.500 0.00 0.00 39.70 3.06
3382 10180 7.224362 TGCTGAAACTTTGGTTACATCAAAATG 59.776 33.333 0.00 0.00 35.33 2.32
3383 10181 7.437862 GCTGAAACTTTGGTTACATCAAAATGA 59.562 33.333 0.00 0.00 34.21 2.57
3384 10182 9.480053 CTGAAACTTTGGTTACATCAAAATGAT 57.520 29.630 0.00 0.00 34.62 2.45
3385 10183 9.258826 TGAAACTTTGGTTACATCAAAATGATG 57.741 29.630 16.60 16.60 45.55 3.07
3386 10184 9.474920 GAAACTTTGGTTACATCAAAATGATGA 57.525 29.630 23.16 7.59 44.36 2.92
3387 10185 9.480053 AAACTTTGGTTACATCAAAATGATGAG 57.520 29.630 23.16 12.35 44.36 2.90
3465 12662 2.209838 CGTAGCATGTCATTCCGACT 57.790 50.000 0.00 0.00 45.60 4.18
3466 12663 1.854743 CGTAGCATGTCATTCCGACTG 59.145 52.381 0.00 0.00 45.60 3.51
3467 12664 2.205074 GTAGCATGTCATTCCGACTGG 58.795 52.381 0.00 0.00 45.60 4.00
3468 12665 0.107508 AGCATGTCATTCCGACTGGG 60.108 55.000 0.00 0.00 45.60 4.45
3469 12666 1.718757 GCATGTCATTCCGACTGGGC 61.719 60.000 0.00 0.00 45.60 5.36
3470 12667 0.107508 CATGTCATTCCGACTGGGCT 60.108 55.000 0.00 0.00 45.60 5.19
3471 12668 0.107508 ATGTCATTCCGACTGGGCTG 60.108 55.000 0.00 0.00 45.60 4.85
3472 12669 1.191489 TGTCATTCCGACTGGGCTGA 61.191 55.000 0.00 0.00 45.60 4.26
3473 12670 0.179000 GTCATTCCGACTGGGCTGAT 59.821 55.000 0.00 0.00 41.81 2.90
3474 12671 0.465705 TCATTCCGACTGGGCTGATC 59.534 55.000 0.00 0.00 35.24 2.92
3475 12672 0.877649 CATTCCGACTGGGCTGATCG 60.878 60.000 0.00 0.00 35.24 3.69
3476 12673 1.043116 ATTCCGACTGGGCTGATCGA 61.043 55.000 6.43 0.00 38.10 3.59
3477 12674 1.043116 TTCCGACTGGGCTGATCGAT 61.043 55.000 0.00 0.00 38.10 3.59
3478 12675 1.006805 CCGACTGGGCTGATCGATC 60.007 63.158 18.72 18.72 38.10 3.69
3479 12676 1.371022 CGACTGGGCTGATCGATCG 60.371 63.158 20.03 9.36 38.10 3.69
3480 12677 1.736586 GACTGGGCTGATCGATCGT 59.263 57.895 20.03 10.64 0.00 3.73
3481 12678 0.596083 GACTGGGCTGATCGATCGTG 60.596 60.000 20.03 15.72 0.00 4.35
3482 12679 1.323271 ACTGGGCTGATCGATCGTGT 61.323 55.000 20.03 5.18 0.00 4.49
3483 12680 0.596083 CTGGGCTGATCGATCGTGTC 60.596 60.000 20.03 15.91 0.00 3.67
3484 12681 1.319614 TGGGCTGATCGATCGTGTCA 61.320 55.000 20.03 18.10 0.00 3.58
3485 12682 0.179111 GGGCTGATCGATCGTGTCAA 60.179 55.000 20.03 0.87 0.00 3.18
3486 12683 1.640428 GGCTGATCGATCGTGTCAAA 58.360 50.000 20.03 0.14 0.00 2.69
3487 12684 1.590238 GGCTGATCGATCGTGTCAAAG 59.410 52.381 20.03 11.00 0.00 2.77
3488 12685 1.005557 GCTGATCGATCGTGTCAAAGC 60.006 52.381 20.03 16.56 0.00 3.51
3489 12686 2.262211 CTGATCGATCGTGTCAAAGCA 58.738 47.619 20.03 2.34 0.00 3.91
3490 12687 2.862536 CTGATCGATCGTGTCAAAGCAT 59.137 45.455 20.03 0.00 0.00 3.79
3491 12688 2.860136 TGATCGATCGTGTCAAAGCATC 59.140 45.455 20.03 7.77 0.00 3.91
3492 12689 1.640428 TCGATCGTGTCAAAGCATCC 58.360 50.000 15.94 0.00 0.00 3.51
3493 12690 0.652592 CGATCGTGTCAAAGCATCCC 59.347 55.000 7.03 0.00 0.00 3.85
3494 12691 0.652592 GATCGTGTCAAAGCATCCCG 59.347 55.000 0.00 0.00 0.00 5.14
3495 12692 0.036388 ATCGTGTCAAAGCATCCCGT 60.036 50.000 0.00 0.00 0.00 5.28
3496 12693 0.948623 TCGTGTCAAAGCATCCCGTG 60.949 55.000 0.00 0.00 0.00 4.94
3497 12694 1.875963 GTGTCAAAGCATCCCGTGG 59.124 57.895 0.00 0.00 0.00 4.94
3498 12695 0.889186 GTGTCAAAGCATCCCGTGGT 60.889 55.000 0.00 0.00 41.11 4.16
3503 12700 1.077716 AAGCATCCCGTGGTTAGGC 60.078 57.895 0.00 0.00 46.11 3.93
3504 12701 1.562672 AAGCATCCCGTGGTTAGGCT 61.563 55.000 0.00 0.00 46.11 4.58
3505 12702 1.077716 GCATCCCGTGGTTAGGCTT 60.078 57.895 0.00 0.00 0.00 4.35
3506 12703 0.679960 GCATCCCGTGGTTAGGCTTT 60.680 55.000 0.00 0.00 0.00 3.51
3507 12704 1.834188 CATCCCGTGGTTAGGCTTTT 58.166 50.000 0.00 0.00 0.00 2.27
3508 12705 1.472480 CATCCCGTGGTTAGGCTTTTG 59.528 52.381 0.00 0.00 0.00 2.44
3509 12706 0.766131 TCCCGTGGTTAGGCTTTTGA 59.234 50.000 0.00 0.00 0.00 2.69
3510 12707 1.165270 CCCGTGGTTAGGCTTTTGAG 58.835 55.000 0.00 0.00 0.00 3.02
3511 12708 1.271163 CCCGTGGTTAGGCTTTTGAGA 60.271 52.381 0.00 0.00 0.00 3.27
3512 12709 2.076863 CCGTGGTTAGGCTTTTGAGAG 58.923 52.381 0.00 0.00 0.00 3.20
3513 12710 2.550208 CCGTGGTTAGGCTTTTGAGAGT 60.550 50.000 0.00 0.00 0.00 3.24
3514 12711 3.139077 CGTGGTTAGGCTTTTGAGAGTT 58.861 45.455 0.00 0.00 0.00 3.01
3515 12712 3.564225 CGTGGTTAGGCTTTTGAGAGTTT 59.436 43.478 0.00 0.00 0.00 2.66
3516 12713 4.554723 CGTGGTTAGGCTTTTGAGAGTTTG 60.555 45.833 0.00 0.00 0.00 2.93
3517 12714 4.578928 GTGGTTAGGCTTTTGAGAGTTTGA 59.421 41.667 0.00 0.00 0.00 2.69
3518 12715 4.578928 TGGTTAGGCTTTTGAGAGTTTGAC 59.421 41.667 0.00 0.00 0.00 3.18
3519 12716 4.822350 GGTTAGGCTTTTGAGAGTTTGACT 59.178 41.667 0.00 0.00 0.00 3.41
3520 12717 5.049336 GGTTAGGCTTTTGAGAGTTTGACTC 60.049 44.000 0.00 0.00 45.38 3.36
3529 12726 2.218953 GAGTTTGACTCGTGGTGACA 57.781 50.000 0.00 0.00 35.28 3.58
3530 12727 2.546778 GAGTTTGACTCGTGGTGACAA 58.453 47.619 0.00 0.00 37.55 3.18
3531 12728 2.277084 AGTTTGACTCGTGGTGACAAC 58.723 47.619 0.00 0.00 46.06 3.32
3532 12729 1.005347 GTTTGACTCGTGGTGACAACG 60.005 52.381 6.08 6.08 46.06 4.10
3533 12730 0.456628 TTGACTCGTGGTGACAACGA 59.543 50.000 15.17 15.17 46.06 3.85
3534 12731 0.456628 TGACTCGTGGTGACAACGAA 59.543 50.000 16.72 0.00 46.06 3.85
3535 12732 1.135053 TGACTCGTGGTGACAACGAAA 60.135 47.619 16.72 2.53 46.06 3.46
3536 12733 1.257155 GACTCGTGGTGACAACGAAAC 59.743 52.381 16.72 9.40 46.06 2.78
3537 12734 1.282817 CTCGTGGTGACAACGAAACA 58.717 50.000 16.72 0.00 46.06 2.83
3538 12735 1.864711 CTCGTGGTGACAACGAAACAT 59.135 47.619 16.72 0.00 46.06 2.71
3539 12736 1.595328 TCGTGGTGACAACGAAACATG 59.405 47.619 13.54 0.00 46.06 3.21
3540 12737 1.753956 GTGGTGACAACGAAACATGC 58.246 50.000 0.00 0.00 46.06 4.06
3541 12738 1.064803 GTGGTGACAACGAAACATGCA 59.935 47.619 0.00 0.00 46.06 3.96
3542 12739 1.952990 TGGTGACAACGAAACATGCAT 59.047 42.857 0.00 0.00 37.44 3.96
3543 12740 2.287487 TGGTGACAACGAAACATGCATG 60.287 45.455 25.09 25.09 37.44 4.06
3544 12741 1.715519 GTGACAACGAAACATGCATGC 59.284 47.619 26.53 11.82 0.00 4.06
3545 12742 1.608109 TGACAACGAAACATGCATGCT 59.392 42.857 26.53 12.25 0.00 3.79
3546 12743 1.980844 GACAACGAAACATGCATGCTG 59.019 47.619 26.53 16.29 0.00 4.41
3547 12744 0.711670 CAACGAAACATGCATGCTGC 59.288 50.000 26.53 12.56 45.29 5.25
3548 12745 0.599558 AACGAAACATGCATGCTGCT 59.400 45.000 26.53 8.32 45.31 4.24
3549 12746 1.452110 ACGAAACATGCATGCTGCTA 58.548 45.000 26.53 0.00 45.31 3.49
3550 12747 1.399440 ACGAAACATGCATGCTGCTAG 59.601 47.619 26.53 14.81 45.31 3.42
3551 12748 1.399440 CGAAACATGCATGCTGCTAGT 59.601 47.619 26.53 1.90 45.31 2.57
3552 12749 2.790123 CGAAACATGCATGCTGCTAGTG 60.790 50.000 26.53 10.14 45.31 2.74
3553 12750 0.454600 AACATGCATGCTGCTAGTGC 59.545 50.000 26.53 14.97 45.31 4.40
3565 12762 2.354109 GCTAGTGCAAGCTTTTTCCC 57.646 50.000 0.00 0.00 39.50 3.97
3566 12763 1.613437 GCTAGTGCAAGCTTTTTCCCA 59.387 47.619 0.00 0.00 39.50 4.37
3567 12764 2.035832 GCTAGTGCAAGCTTTTTCCCAA 59.964 45.455 0.00 0.00 39.50 4.12
3568 12765 3.492482 GCTAGTGCAAGCTTTTTCCCAAA 60.492 43.478 0.00 0.00 39.50 3.28
3569 12766 2.905075 AGTGCAAGCTTTTTCCCAAAC 58.095 42.857 0.00 0.00 0.00 2.93
3570 12767 2.235898 AGTGCAAGCTTTTTCCCAAACA 59.764 40.909 0.00 0.00 0.00 2.83
3571 12768 3.006247 GTGCAAGCTTTTTCCCAAACAA 58.994 40.909 0.00 0.00 0.00 2.83
3572 12769 3.063861 GTGCAAGCTTTTTCCCAAACAAG 59.936 43.478 0.00 0.00 0.00 3.16
3573 12770 3.055530 TGCAAGCTTTTTCCCAAACAAGA 60.056 39.130 0.00 0.00 0.00 3.02
3574 12771 4.129380 GCAAGCTTTTTCCCAAACAAGAT 58.871 39.130 0.00 0.00 0.00 2.40
3575 12772 4.024641 GCAAGCTTTTTCCCAAACAAGATG 60.025 41.667 0.00 0.00 0.00 2.90
3576 12773 5.358922 CAAGCTTTTTCCCAAACAAGATGA 58.641 37.500 0.00 0.00 0.00 2.92
3577 12774 5.612725 AGCTTTTTCCCAAACAAGATGAA 57.387 34.783 0.00 0.00 0.00 2.57
3578 12775 5.988287 AGCTTTTTCCCAAACAAGATGAAA 58.012 33.333 0.00 0.00 0.00 2.69
3579 12776 6.413892 AGCTTTTTCCCAAACAAGATGAAAA 58.586 32.000 0.00 0.00 34.22 2.29
3580 12777 7.056006 AGCTTTTTCCCAAACAAGATGAAAAT 58.944 30.769 0.00 0.00 35.54 1.82
3581 12778 7.227314 AGCTTTTTCCCAAACAAGATGAAAATC 59.773 33.333 0.00 0.00 35.54 2.17
3582 12779 7.227314 GCTTTTTCCCAAACAAGATGAAAATCT 59.773 33.333 0.00 0.00 35.54 2.40
3583 12780 8.661352 TTTTTCCCAAACAAGATGAAAATCTC 57.339 30.769 0.00 0.00 35.54 2.75
3584 12781 5.982890 TCCCAAACAAGATGAAAATCTCC 57.017 39.130 0.00 0.00 0.00 3.71
3585 12782 5.392995 TCCCAAACAAGATGAAAATCTCCA 58.607 37.500 0.00 0.00 0.00 3.86
3586 12783 5.837979 TCCCAAACAAGATGAAAATCTCCAA 59.162 36.000 0.00 0.00 0.00 3.53
3587 12784 5.928264 CCCAAACAAGATGAAAATCTCCAAC 59.072 40.000 0.00 0.00 0.00 3.77
3588 12785 6.239402 CCCAAACAAGATGAAAATCTCCAACT 60.239 38.462 0.00 0.00 0.00 3.16
3589 12786 6.865205 CCAAACAAGATGAAAATCTCCAACTC 59.135 38.462 0.00 0.00 0.00 3.01
3590 12787 6.581171 AACAAGATGAAAATCTCCAACTCC 57.419 37.500 0.00 0.00 0.00 3.85
3591 12788 5.885465 ACAAGATGAAAATCTCCAACTCCT 58.115 37.500 0.00 0.00 0.00 3.69
3592 12789 7.020827 ACAAGATGAAAATCTCCAACTCCTA 57.979 36.000 0.00 0.00 0.00 2.94
3593 12790 7.108847 ACAAGATGAAAATCTCCAACTCCTAG 58.891 38.462 0.00 0.00 0.00 3.02
3594 12791 6.882768 AGATGAAAATCTCCAACTCCTAGT 57.117 37.500 0.00 0.00 0.00 2.57
3595 12792 7.979786 AGATGAAAATCTCCAACTCCTAGTA 57.020 36.000 0.00 0.00 0.00 1.82
3596 12793 7.787028 AGATGAAAATCTCCAACTCCTAGTAC 58.213 38.462 0.00 0.00 0.00 2.73
3597 12794 6.928348 TGAAAATCTCCAACTCCTAGTACA 57.072 37.500 0.00 0.00 0.00 2.90
3598 12795 7.496346 TGAAAATCTCCAACTCCTAGTACAT 57.504 36.000 0.00 0.00 0.00 2.29
3599 12796 7.331026 TGAAAATCTCCAACTCCTAGTACATG 58.669 38.462 0.00 0.00 0.00 3.21
3600 12797 4.946478 ATCTCCAACTCCTAGTACATGC 57.054 45.455 0.00 0.00 0.00 4.06
3601 12798 3.708451 TCTCCAACTCCTAGTACATGCA 58.292 45.455 0.00 0.00 0.00 3.96
3602 12799 4.290093 TCTCCAACTCCTAGTACATGCAT 58.710 43.478 0.00 0.00 0.00 3.96
3603 12800 4.100035 TCTCCAACTCCTAGTACATGCATG 59.900 45.833 25.09 25.09 0.00 4.06
3604 12801 2.874701 CCAACTCCTAGTACATGCATGC 59.125 50.000 26.53 11.82 0.00 4.06
3605 12802 3.432749 CCAACTCCTAGTACATGCATGCT 60.433 47.826 26.53 17.96 0.00 3.79
3606 12803 4.202253 CCAACTCCTAGTACATGCATGCTA 60.202 45.833 26.53 18.12 0.00 3.49
3607 12804 4.862902 ACTCCTAGTACATGCATGCTAG 57.137 45.455 26.53 24.93 0.00 3.42
3608 12805 4.219115 ACTCCTAGTACATGCATGCTAGT 58.781 43.478 26.53 20.01 31.58 2.57
3609 12806 5.386060 ACTCCTAGTACATGCATGCTAGTA 58.614 41.667 26.53 20.05 31.58 1.82
3610 12807 5.241949 ACTCCTAGTACATGCATGCTAGTAC 59.758 44.000 29.59 29.59 37.65 2.73
3611 12808 5.137551 TCCTAGTACATGCATGCTAGTACA 58.862 41.667 33.81 24.66 39.33 2.90
3612 12809 5.596772 TCCTAGTACATGCATGCTAGTACAA 59.403 40.000 33.81 22.10 39.33 2.41
3613 12810 5.923114 CCTAGTACATGCATGCTAGTACAAG 59.077 44.000 33.81 24.47 39.33 3.16
3614 12811 4.122776 AGTACATGCATGCTAGTACAAGC 58.877 43.478 33.81 19.56 43.08 4.01
3615 12812 3.272574 ACATGCATGCTAGTACAAGCT 57.727 42.857 26.53 0.00 43.19 3.74
3616 12813 3.614092 ACATGCATGCTAGTACAAGCTT 58.386 40.909 26.53 0.00 43.19 3.74
3617 12814 3.624861 ACATGCATGCTAGTACAAGCTTC 59.375 43.478 26.53 0.00 43.19 3.86
3618 12815 3.333029 TGCATGCTAGTACAAGCTTCA 57.667 42.857 20.33 0.00 43.19 3.02
3619 12816 3.673902 TGCATGCTAGTACAAGCTTCAA 58.326 40.909 20.33 0.00 43.19 2.69
3620 12817 4.071423 TGCATGCTAGTACAAGCTTCAAA 58.929 39.130 20.33 0.00 43.19 2.69
3621 12818 4.083324 TGCATGCTAGTACAAGCTTCAAAC 60.083 41.667 20.33 0.00 43.19 2.93
3622 12819 4.641954 CATGCTAGTACAAGCTTCAAACG 58.358 43.478 0.00 0.00 43.19 3.60
3623 12820 3.985008 TGCTAGTACAAGCTTCAAACGA 58.015 40.909 0.00 0.00 43.19 3.85
3624 12821 4.566004 TGCTAGTACAAGCTTCAAACGAT 58.434 39.130 0.00 0.00 43.19 3.73
3625 12822 4.388773 TGCTAGTACAAGCTTCAAACGATG 59.611 41.667 0.00 0.00 43.19 3.84
3626 12823 4.625742 GCTAGTACAAGCTTCAAACGATGA 59.374 41.667 0.00 0.00 39.50 2.92
3627 12824 4.992381 AGTACAAGCTTCAAACGATGAC 57.008 40.909 0.00 0.00 37.92 3.06
3628 12825 4.377021 AGTACAAGCTTCAAACGATGACA 58.623 39.130 0.00 0.00 37.92 3.58
3629 12826 3.885484 ACAAGCTTCAAACGATGACAG 57.115 42.857 0.00 0.00 37.92 3.51
3630 12827 3.466836 ACAAGCTTCAAACGATGACAGA 58.533 40.909 0.00 0.00 37.92 3.41
3631 12828 3.496130 ACAAGCTTCAAACGATGACAGAG 59.504 43.478 0.00 0.00 37.92 3.35
3632 12829 2.693069 AGCTTCAAACGATGACAGAGG 58.307 47.619 0.00 0.00 37.92 3.69
3633 12830 2.300152 AGCTTCAAACGATGACAGAGGA 59.700 45.455 0.00 0.00 37.92 3.71
3634 12831 2.413453 GCTTCAAACGATGACAGAGGAC 59.587 50.000 0.00 0.00 37.92 3.85
3635 12832 3.862642 GCTTCAAACGATGACAGAGGACT 60.863 47.826 0.00 0.00 37.92 3.85
3637 12834 2.890945 TCAAACGATGACAGAGGACTGA 59.109 45.455 0.00 0.00 45.89 3.41
3638 12835 3.511540 TCAAACGATGACAGAGGACTGAT 59.488 43.478 0.00 0.00 45.89 2.90
3639 12836 3.791973 AACGATGACAGAGGACTGATC 57.208 47.619 0.00 0.00 46.03 2.92
3640 12837 2.728007 ACGATGACAGAGGACTGATCA 58.272 47.619 0.00 0.00 46.03 2.92
3641 12838 3.295093 ACGATGACAGAGGACTGATCAT 58.705 45.455 0.00 0.00 46.03 2.45
3642 12839 3.703556 ACGATGACAGAGGACTGATCATT 59.296 43.478 0.00 0.00 46.03 2.57
3643 12840 4.202101 ACGATGACAGAGGACTGATCATTC 60.202 45.833 4.52 4.52 46.03 2.67
3644 12841 4.202090 CGATGACAGAGGACTGATCATTCA 60.202 45.833 14.31 0.54 46.03 2.57
3645 12842 5.509332 CGATGACAGAGGACTGATCATTCAT 60.509 44.000 14.31 7.64 46.03 2.57
3646 12843 5.019785 TGACAGAGGACTGATCATTCATG 57.980 43.478 14.31 11.45 46.03 3.07
3647 12844 4.468868 TGACAGAGGACTGATCATTCATGT 59.531 41.667 14.31 14.04 46.03 3.21
3648 12845 4.767478 ACAGAGGACTGATCATTCATGTG 58.233 43.478 18.97 18.97 46.03 3.21
3649 12846 4.224594 ACAGAGGACTGATCATTCATGTGT 59.775 41.667 20.06 20.06 46.03 3.72
3650 12847 4.809958 CAGAGGACTGATCATTCATGTGTC 59.190 45.833 14.27 8.18 46.03 3.67
3651 12848 4.125703 GAGGACTGATCATTCATGTGTCC 58.874 47.826 16.45 16.45 41.78 4.02
3652 12849 3.520721 AGGACTGATCATTCATGTGTCCA 59.479 43.478 22.81 0.00 43.31 4.02
3653 12850 3.875727 GGACTGATCATTCATGTGTCCAG 59.124 47.826 18.36 0.00 41.29 3.86
3654 12851 3.276857 ACTGATCATTCATGTGTCCAGC 58.723 45.455 0.00 0.00 0.00 4.85
3655 12852 3.275999 CTGATCATTCATGTGTCCAGCA 58.724 45.455 0.00 0.00 0.00 4.41
3656 12853 3.688235 TGATCATTCATGTGTCCAGCAA 58.312 40.909 0.00 0.00 0.00 3.91
3657 12854 3.441222 TGATCATTCATGTGTCCAGCAAC 59.559 43.478 0.00 0.00 0.00 4.17
3658 12855 3.144657 TCATTCATGTGTCCAGCAACT 57.855 42.857 0.00 0.00 0.00 3.16
3659 12856 3.489355 TCATTCATGTGTCCAGCAACTT 58.511 40.909 0.00 0.00 0.00 2.66
3660 12857 3.890756 TCATTCATGTGTCCAGCAACTTT 59.109 39.130 0.00 0.00 0.00 2.66
3661 12858 3.713858 TTCATGTGTCCAGCAACTTTG 57.286 42.857 0.00 0.00 0.00 2.77
3662 12859 2.653726 TCATGTGTCCAGCAACTTTGT 58.346 42.857 0.00 0.00 0.00 2.83
3663 12860 2.618241 TCATGTGTCCAGCAACTTTGTC 59.382 45.455 0.00 0.00 0.00 3.18
3664 12861 1.388547 TGTGTCCAGCAACTTTGTCC 58.611 50.000 0.00 0.00 0.00 4.02
3665 12862 1.064758 TGTGTCCAGCAACTTTGTCCT 60.065 47.619 0.00 0.00 0.00 3.85
3666 12863 1.604278 GTGTCCAGCAACTTTGTCCTC 59.396 52.381 0.00 0.00 0.00 3.71
3667 12864 1.239347 GTCCAGCAACTTTGTCCTCC 58.761 55.000 0.00 0.00 0.00 4.30
3668 12865 1.140312 TCCAGCAACTTTGTCCTCCT 58.860 50.000 0.00 0.00 0.00 3.69
3669 12866 1.072331 TCCAGCAACTTTGTCCTCCTC 59.928 52.381 0.00 0.00 0.00 3.71
3670 12867 1.202806 CCAGCAACTTTGTCCTCCTCA 60.203 52.381 0.00 0.00 0.00 3.86
3671 12868 1.876156 CAGCAACTTTGTCCTCCTCAC 59.124 52.381 0.00 0.00 0.00 3.51
3672 12869 1.490490 AGCAACTTTGTCCTCCTCACA 59.510 47.619 0.00 0.00 0.00 3.58
3673 12870 1.876156 GCAACTTTGTCCTCCTCACAG 59.124 52.381 0.00 0.00 0.00 3.66
3674 12871 2.498167 CAACTTTGTCCTCCTCACAGG 58.502 52.381 0.00 0.00 36.46 4.00
3675 12872 1.059913 ACTTTGTCCTCCTCACAGGG 58.940 55.000 0.00 0.00 35.59 4.45
3676 12873 1.352083 CTTTGTCCTCCTCACAGGGA 58.648 55.000 0.00 0.00 35.59 4.20
3688 12885 2.608623 TCACAGGGAGACAACAGATGA 58.391 47.619 0.00 0.00 0.00 2.92
3689 12886 2.972021 TCACAGGGAGACAACAGATGAA 59.028 45.455 0.00 0.00 0.00 2.57
3690 12887 3.070018 CACAGGGAGACAACAGATGAAC 58.930 50.000 0.00 0.00 0.00 3.18
3691 12888 2.289072 ACAGGGAGACAACAGATGAACG 60.289 50.000 0.00 0.00 0.00 3.95
3692 12889 1.079503 GGGAGACAACAGATGAACGC 58.920 55.000 0.00 0.00 0.00 4.84
3693 12890 1.338200 GGGAGACAACAGATGAACGCT 60.338 52.381 0.00 0.00 0.00 5.07
3694 12891 2.094182 GGGAGACAACAGATGAACGCTA 60.094 50.000 0.00 0.00 0.00 4.26
3695 12892 3.182967 GGAGACAACAGATGAACGCTAG 58.817 50.000 0.00 0.00 0.00 3.42
3696 12893 2.600867 GAGACAACAGATGAACGCTAGC 59.399 50.000 4.06 4.06 0.00 3.42
3697 12894 2.232452 AGACAACAGATGAACGCTAGCT 59.768 45.455 13.93 0.00 0.00 3.32
3698 12895 2.600867 GACAACAGATGAACGCTAGCTC 59.399 50.000 13.93 5.01 0.00 4.09
3699 12896 1.929836 CAACAGATGAACGCTAGCTCC 59.070 52.381 13.93 2.06 0.00 4.70
3700 12897 1.186200 ACAGATGAACGCTAGCTCCA 58.814 50.000 13.93 8.02 0.00 3.86
3701 12898 1.135915 ACAGATGAACGCTAGCTCCAG 59.864 52.381 13.93 0.00 0.00 3.86
3702 12899 1.406898 CAGATGAACGCTAGCTCCAGA 59.593 52.381 13.93 0.00 0.00 3.86
3703 12900 2.035704 CAGATGAACGCTAGCTCCAGAT 59.964 50.000 13.93 0.00 0.00 2.90
3704 12901 3.254411 CAGATGAACGCTAGCTCCAGATA 59.746 47.826 13.93 0.00 0.00 1.98
3705 12902 3.891977 AGATGAACGCTAGCTCCAGATAA 59.108 43.478 13.93 0.00 0.00 1.75
3706 12903 3.438297 TGAACGCTAGCTCCAGATAAC 57.562 47.619 13.93 0.00 0.00 1.89
3707 12904 2.758423 TGAACGCTAGCTCCAGATAACA 59.242 45.455 13.93 0.00 0.00 2.41
3708 12905 2.873133 ACGCTAGCTCCAGATAACAC 57.127 50.000 13.93 0.00 0.00 3.32
3709 12906 1.409427 ACGCTAGCTCCAGATAACACC 59.591 52.381 13.93 0.00 0.00 4.16
3710 12907 1.269831 CGCTAGCTCCAGATAACACCC 60.270 57.143 13.93 0.00 0.00 4.61
3711 12908 1.762957 GCTAGCTCCAGATAACACCCA 59.237 52.381 7.70 0.00 0.00 4.51
3712 12909 2.170607 GCTAGCTCCAGATAACACCCAA 59.829 50.000 7.70 0.00 0.00 4.12
3713 12910 3.742640 GCTAGCTCCAGATAACACCCAAG 60.743 52.174 7.70 0.00 0.00 3.61
3714 12911 2.551270 AGCTCCAGATAACACCCAAGA 58.449 47.619 0.00 0.00 0.00 3.02
3715 12912 2.912956 AGCTCCAGATAACACCCAAGAA 59.087 45.455 0.00 0.00 0.00 2.52
3716 12913 3.330701 AGCTCCAGATAACACCCAAGAAA 59.669 43.478 0.00 0.00 0.00 2.52
3717 12914 3.691609 GCTCCAGATAACACCCAAGAAAG 59.308 47.826 0.00 0.00 0.00 2.62
3718 12915 4.265073 CTCCAGATAACACCCAAGAAAGG 58.735 47.826 0.00 0.00 0.00 3.11
3719 12916 3.913799 TCCAGATAACACCCAAGAAAGGA 59.086 43.478 0.00 0.00 0.00 3.36
3720 12917 4.019321 TCCAGATAACACCCAAGAAAGGAG 60.019 45.833 0.00 0.00 0.00 3.69
3721 12918 4.263506 CCAGATAACACCCAAGAAAGGAGT 60.264 45.833 0.00 0.00 0.00 3.85
3722 12919 4.938226 CAGATAACACCCAAGAAAGGAGTC 59.062 45.833 0.00 0.00 0.00 3.36
3723 12920 4.597507 AGATAACACCCAAGAAAGGAGTCA 59.402 41.667 0.00 0.00 0.00 3.41
3724 12921 3.662759 AACACCCAAGAAAGGAGTCAA 57.337 42.857 0.00 0.00 0.00 3.18
3725 12922 2.932261 ACACCCAAGAAAGGAGTCAAC 58.068 47.619 0.00 0.00 0.00 3.18
3726 12923 2.509964 ACACCCAAGAAAGGAGTCAACT 59.490 45.455 0.00 0.00 0.00 3.16
3727 12924 2.880890 CACCCAAGAAAGGAGTCAACTG 59.119 50.000 0.00 0.00 0.00 3.16
3728 12925 2.777692 ACCCAAGAAAGGAGTCAACTGA 59.222 45.455 0.00 0.00 0.00 3.41
3729 12926 3.202151 ACCCAAGAAAGGAGTCAACTGAA 59.798 43.478 0.00 0.00 0.00 3.02
3730 12927 3.565902 CCCAAGAAAGGAGTCAACTGAAC 59.434 47.826 0.00 0.00 0.00 3.18
3731 12928 3.565902 CCAAGAAAGGAGTCAACTGAACC 59.434 47.826 0.00 0.00 0.00 3.62
3732 12929 3.493767 AGAAAGGAGTCAACTGAACCC 57.506 47.619 0.00 0.00 0.00 4.11
3733 12930 3.049344 AGAAAGGAGTCAACTGAACCCT 58.951 45.455 0.00 0.00 31.95 4.34
3734 12931 4.232091 AGAAAGGAGTCAACTGAACCCTA 58.768 43.478 0.00 0.00 30.91 3.53
3735 12932 4.846940 AGAAAGGAGTCAACTGAACCCTAT 59.153 41.667 0.00 0.00 30.91 2.57
3736 12933 6.023603 AGAAAGGAGTCAACTGAACCCTATA 58.976 40.000 0.00 0.00 30.91 1.31
3737 12934 6.500751 AGAAAGGAGTCAACTGAACCCTATAA 59.499 38.462 0.00 0.00 30.91 0.98
3738 12935 5.941555 AGGAGTCAACTGAACCCTATAAG 57.058 43.478 0.00 0.00 0.00 1.73
3739 12936 4.162509 AGGAGTCAACTGAACCCTATAAGC 59.837 45.833 0.00 0.00 0.00 3.09
3740 12937 4.081087 GGAGTCAACTGAACCCTATAAGCA 60.081 45.833 0.00 0.00 0.00 3.91
3741 12938 5.091261 AGTCAACTGAACCCTATAAGCAG 57.909 43.478 0.00 0.00 0.00 4.24
3742 12939 4.777896 AGTCAACTGAACCCTATAAGCAGA 59.222 41.667 0.00 0.00 0.00 4.26
3743 12940 4.870991 GTCAACTGAACCCTATAAGCAGAC 59.129 45.833 0.00 0.00 0.00 3.51
3744 12941 4.081087 TCAACTGAACCCTATAAGCAGACC 60.081 45.833 0.00 0.00 0.00 3.85
3745 12942 2.431057 ACTGAACCCTATAAGCAGACCG 59.569 50.000 0.00 0.00 0.00 4.79
3746 12943 2.693591 CTGAACCCTATAAGCAGACCGA 59.306 50.000 0.00 0.00 0.00 4.69
3747 12944 2.693591 TGAACCCTATAAGCAGACCGAG 59.306 50.000 0.00 0.00 0.00 4.63
3748 12945 1.041437 ACCCTATAAGCAGACCGAGC 58.959 55.000 0.00 0.00 0.00 5.03
3749 12946 1.040646 CCCTATAAGCAGACCGAGCA 58.959 55.000 0.00 0.00 0.00 4.26
3750 12947 1.269831 CCCTATAAGCAGACCGAGCAC 60.270 57.143 0.00 0.00 0.00 4.40
3751 12948 1.269831 CCTATAAGCAGACCGAGCACC 60.270 57.143 0.00 0.00 0.00 5.01
3752 12949 1.683917 CTATAAGCAGACCGAGCACCT 59.316 52.381 0.00 0.00 0.00 4.00
3753 12950 0.905357 ATAAGCAGACCGAGCACCTT 59.095 50.000 0.00 0.00 0.00 3.50
3754 12951 0.246635 TAAGCAGACCGAGCACCTTC 59.753 55.000 0.00 0.00 0.00 3.46
3755 12952 1.758440 AAGCAGACCGAGCACCTTCA 61.758 55.000 0.00 0.00 0.00 3.02
3756 12953 1.739562 GCAGACCGAGCACCTTCAG 60.740 63.158 0.00 0.00 0.00 3.02
3757 12954 1.079543 CAGACCGAGCACCTTCAGG 60.080 63.158 0.00 0.00 42.17 3.86
3758 12955 2.435059 GACCGAGCACCTTCAGGC 60.435 66.667 0.00 0.00 39.32 4.85
3759 12956 3.959991 GACCGAGCACCTTCAGGCC 62.960 68.421 0.00 0.00 39.32 5.19
3760 12957 3.710722 CCGAGCACCTTCAGGCCT 61.711 66.667 0.00 0.00 39.32 5.19
3761 12958 2.348998 CGAGCACCTTCAGGCCTT 59.651 61.111 0.00 0.00 39.32 4.35
3762 12959 2.037136 CGAGCACCTTCAGGCCTTG 61.037 63.158 0.00 0.00 39.32 3.61
3763 12960 1.073897 GAGCACCTTCAGGCCTTGT 59.926 57.895 0.00 0.00 39.32 3.16
3764 12961 0.538287 GAGCACCTTCAGGCCTTGTT 60.538 55.000 0.00 0.00 39.32 2.83
3765 12962 0.538287 AGCACCTTCAGGCCTTGTTC 60.538 55.000 0.00 0.00 39.32 3.18
3766 12963 1.856265 GCACCTTCAGGCCTTGTTCG 61.856 60.000 0.00 0.00 39.32 3.95
3767 12964 1.073199 ACCTTCAGGCCTTGTTCGG 59.927 57.895 0.00 1.68 39.32 4.30
3768 12965 1.073199 CCTTCAGGCCTTGTTCGGT 59.927 57.895 0.00 0.00 0.00 4.69
3769 12966 0.537371 CCTTCAGGCCTTGTTCGGTT 60.537 55.000 0.00 0.00 0.00 4.44
3770 12967 1.271163 CCTTCAGGCCTTGTTCGGTTA 60.271 52.381 0.00 0.00 0.00 2.85
3771 12968 2.076863 CTTCAGGCCTTGTTCGGTTAG 58.923 52.381 0.00 0.00 0.00 2.34
3772 12969 0.323629 TCAGGCCTTGTTCGGTTAGG 59.676 55.000 0.00 0.00 0.00 2.69
3776 12973 2.854522 CCTTGTTCGGTTAGGCAGG 58.145 57.895 0.00 0.00 0.00 4.85
3777 12974 0.676782 CCTTGTTCGGTTAGGCAGGG 60.677 60.000 0.00 0.00 0.00 4.45
3778 12975 0.036306 CTTGTTCGGTTAGGCAGGGT 59.964 55.000 0.00 0.00 0.00 4.34
3779 12976 0.475044 TTGTTCGGTTAGGCAGGGTT 59.525 50.000 0.00 0.00 0.00 4.11
3780 12977 0.475044 TGTTCGGTTAGGCAGGGTTT 59.525 50.000 0.00 0.00 0.00 3.27
3781 12978 0.879090 GTTCGGTTAGGCAGGGTTTG 59.121 55.000 0.00 0.00 0.00 2.93
3782 12979 0.766131 TTCGGTTAGGCAGGGTTTGA 59.234 50.000 0.00 0.00 0.00 2.69
3783 12980 0.766131 TCGGTTAGGCAGGGTTTGAA 59.234 50.000 0.00 0.00 0.00 2.69
3784 12981 1.165270 CGGTTAGGCAGGGTTTGAAG 58.835 55.000 0.00 0.00 0.00 3.02
3785 12982 1.271163 CGGTTAGGCAGGGTTTGAAGA 60.271 52.381 0.00 0.00 0.00 2.87
3786 12983 2.437413 GGTTAGGCAGGGTTTGAAGAG 58.563 52.381 0.00 0.00 0.00 2.85
3787 12984 2.437413 GTTAGGCAGGGTTTGAAGAGG 58.563 52.381 0.00 0.00 0.00 3.69
3788 12985 1.742308 TAGGCAGGGTTTGAAGAGGT 58.258 50.000 0.00 0.00 0.00 3.85
3789 12986 0.853530 AGGCAGGGTTTGAAGAGGTT 59.146 50.000 0.00 0.00 0.00 3.50
3790 12987 1.217942 AGGCAGGGTTTGAAGAGGTTT 59.782 47.619 0.00 0.00 0.00 3.27
3791 12988 1.341209 GGCAGGGTTTGAAGAGGTTTG 59.659 52.381 0.00 0.00 0.00 2.93
3792 12989 2.306847 GCAGGGTTTGAAGAGGTTTGA 58.693 47.619 0.00 0.00 0.00 2.69
3793 12990 2.693074 GCAGGGTTTGAAGAGGTTTGAA 59.307 45.455 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 5.391416 CCGTGCCAAACTTTGACAAATTTTT 60.391 36.000 12.16 7.43 0.00 1.94
8 9 3.118956 TCCGTGCCAAACTTTGACAAATT 60.119 39.130 0.05 0.00 0.00 1.82
93 98 2.114616 AGTCCCGATCTCAAATGCTCT 58.885 47.619 0.00 0.00 0.00 4.09
127 135 1.453928 GAAAGGGAGAATGGCCGGG 60.454 63.158 2.18 0.00 0.00 5.73
237 284 1.700985 GAGGAGGAGGAGGAGTGGT 59.299 63.158 0.00 0.00 0.00 4.16
291 387 3.695825 GGGGGACAGGGGAGGAGA 61.696 72.222 0.00 0.00 0.00 3.71
373 6400 4.704103 TGGAGGAGGAGCTGCGGT 62.704 66.667 0.00 0.00 0.00 5.68
588 6623 0.767375 GGGCCATCTCTAATGCAGGA 59.233 55.000 4.39 0.00 0.00 3.86
766 6807 1.988107 TCTCATTTGTCTTCAGGCCCT 59.012 47.619 0.00 0.00 0.00 5.19
820 6861 0.999406 CTCATCTGTACGTTTGGCGG 59.001 55.000 0.00 0.00 46.52 6.13
899 6940 5.083533 AGCTCTTCAGAACAATGGAGTAG 57.916 43.478 0.00 0.00 0.00 2.57
957 6998 1.005037 CCGCCACAGTCTGTAGCAA 60.005 57.895 20.98 0.00 34.68 3.91
962 7003 1.821061 CTCCTTCCGCCACAGTCTGT 61.821 60.000 0.00 0.00 0.00 3.41
967 7008 2.581354 CTCCTCCTTCCGCCACAG 59.419 66.667 0.00 0.00 0.00 3.66
968 7009 3.003173 CCTCCTCCTTCCGCCACA 61.003 66.667 0.00 0.00 0.00 4.17
1038 7079 3.069443 CCTTGCCTGTTTTGCCTTCTTTA 59.931 43.478 0.00 0.00 0.00 1.85
1155 7196 3.526534 GACTAGTTCTGCCTTGTCCATC 58.473 50.000 0.00 0.00 33.05 3.51
1170 7211 2.763448 GACCATCTGCTGAAGGACTAGT 59.237 50.000 20.11 0.00 34.87 2.57
1212 7253 7.040961 TGGATCATGCAATTATATGTCACTGTG 60.041 37.037 0.17 0.17 0.00 3.66
1334 7375 4.261994 GCTTGCAAAGGGAAGTCATTAACA 60.262 41.667 0.00 0.00 46.35 2.41
1418 7459 3.203442 GGTACGAGACGGCATCCA 58.797 61.111 0.00 0.00 0.00 3.41
1527 7568 8.316946 TCAATTAATATGGTGAAAACATGGCAA 58.683 29.630 0.00 0.00 0.00 4.52
1687 7729 6.182627 TCTCATTGAACTTGTCCATAGCATT 58.817 36.000 0.00 0.00 0.00 3.56
2074 8117 8.000709 TCCATTTCTACAATAGCCATCAAGAAT 58.999 33.333 0.00 0.00 0.00 2.40
2303 8346 4.083537 TCGCTTCGTCTGCACAATTATTTT 60.084 37.500 0.00 0.00 0.00 1.82
2449 8492 0.328258 ACCAACCCACTGGCTGATAC 59.672 55.000 0.00 0.00 40.45 2.24
2882 8925 0.386838 ACTTTCTGCAAGCAGGCAAC 59.613 50.000 20.78 0.00 44.40 4.17
2907 8950 9.694520 CAGAATGAACTAAATGAAATAGTGACG 57.305 33.333 0.00 0.00 39.69 4.35
2922 8965 4.794278 TTCTACACCGCAGAATGAACTA 57.206 40.909 0.00 0.00 39.69 2.24
2940 8983 0.179000 GAGCACCGGATGACCATTCT 59.821 55.000 9.46 0.00 35.59 2.40
2941 8984 1.154205 CGAGCACCGGATGACCATTC 61.154 60.000 9.46 0.00 35.59 2.67
2943 9740 2.058001 TCGAGCACCGGATGACCAT 61.058 57.895 9.46 0.00 39.14 3.55
2953 9750 0.384353 GCAAAGAAACGTCGAGCACC 60.384 55.000 0.00 0.00 0.00 5.01
2960 9757 6.855914 TGTGATTTAATCAGCAAAGAAACGTC 59.144 34.615 8.00 0.00 40.53 4.34
2967 9764 6.906659 ACTCAGTGTGATTTAATCAGCAAAG 58.093 36.000 8.00 9.67 40.53 2.77
2968 9765 6.882610 ACTCAGTGTGATTTAATCAGCAAA 57.117 33.333 8.00 0.00 40.53 3.68
3008 9805 2.514592 AACCGATGCGATGCTGGG 60.515 61.111 0.00 0.00 0.00 4.45
3023 9820 0.163146 GAGGCGTAAACACAGCGAAC 59.837 55.000 0.00 0.00 0.00 3.95
3043 9840 2.867109 ATGTGAGTTCCTGAAGTGGG 57.133 50.000 0.00 0.00 0.00 4.61
3046 9843 8.417106 CACTGTATATATGTGAGTTCCTGAAGT 58.583 37.037 11.22 0.00 33.95 3.01
3076 9873 1.562672 GGGTATGGTGGAGGCACACT 61.563 60.000 11.29 0.00 41.09 3.55
3111 9908 3.347077 AGCTGAGATTTGAGGAACAGG 57.653 47.619 0.00 0.00 0.00 4.00
3112 9909 4.577875 AGAAGCTGAGATTTGAGGAACAG 58.422 43.478 0.00 0.00 0.00 3.16
3113 9910 4.630644 AGAAGCTGAGATTTGAGGAACA 57.369 40.909 0.00 0.00 0.00 3.18
3114 9911 5.956068 AAAGAAGCTGAGATTTGAGGAAC 57.044 39.130 0.00 0.00 0.00 3.62
3122 9919 7.454225 ACACTAGGTAAAAAGAAGCTGAGATT 58.546 34.615 0.00 0.00 0.00 2.40
3124 9921 6.420913 ACACTAGGTAAAAAGAAGCTGAGA 57.579 37.500 0.00 0.00 0.00 3.27
3126 9923 8.594550 AGATTACACTAGGTAAAAAGAAGCTGA 58.405 33.333 7.58 0.00 44.70 4.26
3173 9971 1.093159 CAAGAGCATGAGAAGGGCAC 58.907 55.000 0.00 0.00 0.00 5.01
3185 9983 3.887110 CCATCCATGATTAAGCAAGAGCA 59.113 43.478 0.00 0.00 45.49 4.26
3213 10011 2.035066 ACACAGTTTACGTCTAAGCGGT 59.965 45.455 0.00 0.00 35.98 5.68
3238 10036 7.012327 CGCTTTCTAATCCACCTCAATTCATTA 59.988 37.037 0.00 0.00 0.00 1.90
3241 10039 4.635765 CGCTTTCTAATCCACCTCAATTCA 59.364 41.667 0.00 0.00 0.00 2.57
3310 10108 0.114954 TACCGGGACAACCACCTACT 59.885 55.000 6.32 0.00 40.22 2.57
3327 10125 5.241728 ACAGAATGAAGCCTTTTCCAGTTAC 59.758 40.000 0.00 0.00 39.69 2.50
3333 10131 5.904362 ACATACAGAATGAAGCCTTTTCC 57.096 39.130 0.00 0.00 39.69 3.13
3376 10174 6.037940 CCACTGTCATCTACCTCATCATTTTG 59.962 42.308 0.00 0.00 0.00 2.44
3382 10180 2.366916 CCCCACTGTCATCTACCTCATC 59.633 54.545 0.00 0.00 0.00 2.92
3383 10181 2.402564 CCCCACTGTCATCTACCTCAT 58.597 52.381 0.00 0.00 0.00 2.90
3384 10182 1.866015 CCCCACTGTCATCTACCTCA 58.134 55.000 0.00 0.00 0.00 3.86
3385 10183 0.466124 GCCCCACTGTCATCTACCTC 59.534 60.000 0.00 0.00 0.00 3.85
3386 10184 1.330655 CGCCCCACTGTCATCTACCT 61.331 60.000 0.00 0.00 0.00 3.08
3387 10185 1.144057 CGCCCCACTGTCATCTACC 59.856 63.158 0.00 0.00 0.00 3.18
3388 10186 0.249398 AACGCCCCACTGTCATCTAC 59.751 55.000 0.00 0.00 0.00 2.59
3389 10187 0.249120 CAACGCCCCACTGTCATCTA 59.751 55.000 0.00 0.00 0.00 1.98
3390 10188 1.003355 CAACGCCCCACTGTCATCT 60.003 57.895 0.00 0.00 0.00 2.90
3391 10189 1.003839 TCAACGCCCCACTGTCATC 60.004 57.895 0.00 0.00 0.00 2.92
3392 10190 1.003355 CTCAACGCCCCACTGTCAT 60.003 57.895 0.00 0.00 0.00 3.06
3393 10191 2.425592 CTCAACGCCCCACTGTCA 59.574 61.111 0.00 0.00 0.00 3.58
3394 10192 1.823169 TACCTCAACGCCCCACTGTC 61.823 60.000 0.00 0.00 0.00 3.51
3398 12595 0.462047 CATCTACCTCAACGCCCCAC 60.462 60.000 0.00 0.00 0.00 4.61
3435 12632 3.723235 ATGCTACGCAGAGGCCACG 62.723 63.158 5.01 5.64 43.65 4.94
3436 12633 2.176273 CATGCTACGCAGAGGCCAC 61.176 63.158 5.01 0.00 43.65 5.01
3437 12634 2.187685 CATGCTACGCAGAGGCCA 59.812 61.111 5.01 0.00 43.65 5.36
3439 12636 0.531532 ATGACATGCTACGCAGAGGC 60.532 55.000 0.00 0.00 43.65 4.70
3440 12637 1.863454 GAATGACATGCTACGCAGAGG 59.137 52.381 0.00 0.00 43.65 3.69
3441 12638 1.863454 GGAATGACATGCTACGCAGAG 59.137 52.381 0.00 0.00 43.65 3.35
3442 12639 1.802508 CGGAATGACATGCTACGCAGA 60.803 52.381 0.00 0.00 43.65 4.26
3443 12640 0.578683 CGGAATGACATGCTACGCAG 59.421 55.000 0.00 0.00 43.65 5.18
3444 12641 0.174617 TCGGAATGACATGCTACGCA 59.825 50.000 0.00 0.00 44.86 5.24
3445 12642 2.971997 TCGGAATGACATGCTACGC 58.028 52.632 0.00 0.00 0.00 4.42
3455 12652 0.465705 GATCAGCCCAGTCGGAATGA 59.534 55.000 7.07 0.00 32.95 2.57
3456 12653 0.877649 CGATCAGCCCAGTCGGAATG 60.878 60.000 0.00 0.00 0.00 2.67
3457 12654 1.043116 TCGATCAGCCCAGTCGGAAT 61.043 55.000 0.00 0.00 36.14 3.01
3458 12655 1.043116 ATCGATCAGCCCAGTCGGAA 61.043 55.000 0.00 0.00 36.14 4.30
3459 12656 1.455773 ATCGATCAGCCCAGTCGGA 60.456 57.895 0.00 0.00 36.14 4.55
3460 12657 1.006805 GATCGATCAGCCCAGTCGG 60.007 63.158 20.52 0.00 36.14 4.79
3461 12658 1.371022 CGATCGATCAGCCCAGTCG 60.371 63.158 24.40 5.56 36.75 4.18
3462 12659 0.596083 CACGATCGATCAGCCCAGTC 60.596 60.000 24.34 0.00 0.00 3.51
3463 12660 1.323271 ACACGATCGATCAGCCCAGT 61.323 55.000 24.34 10.49 0.00 4.00
3464 12661 0.596083 GACACGATCGATCAGCCCAG 60.596 60.000 24.34 9.86 0.00 4.45
3465 12662 1.319614 TGACACGATCGATCAGCCCA 61.320 55.000 24.34 13.45 0.00 5.36
3466 12663 0.179111 TTGACACGATCGATCAGCCC 60.179 55.000 24.34 11.19 0.00 5.19
3467 12664 1.590238 CTTTGACACGATCGATCAGCC 59.410 52.381 24.34 9.83 0.00 4.85
3468 12665 1.005557 GCTTTGACACGATCGATCAGC 60.006 52.381 24.34 18.61 0.00 4.26
3469 12666 2.262211 TGCTTTGACACGATCGATCAG 58.738 47.619 24.34 17.80 0.00 2.90
3470 12667 2.362169 TGCTTTGACACGATCGATCA 57.638 45.000 24.34 20.81 0.00 2.92
3471 12668 2.219674 GGATGCTTTGACACGATCGATC 59.780 50.000 24.34 18.44 0.00 3.69
3472 12669 2.205074 GGATGCTTTGACACGATCGAT 58.795 47.619 24.34 9.45 0.00 3.59
3473 12670 1.640428 GGATGCTTTGACACGATCGA 58.360 50.000 24.34 0.00 0.00 3.59
3474 12671 0.652592 GGGATGCTTTGACACGATCG 59.347 55.000 14.88 14.88 0.00 3.69
3475 12672 0.652592 CGGGATGCTTTGACACGATC 59.347 55.000 0.00 0.00 31.82 3.69
3476 12673 0.036388 ACGGGATGCTTTGACACGAT 60.036 50.000 0.00 0.00 34.43 3.73
3477 12674 0.948623 CACGGGATGCTTTGACACGA 60.949 55.000 0.00 0.00 34.43 4.35
3478 12675 1.497278 CACGGGATGCTTTGACACG 59.503 57.895 0.00 0.00 36.48 4.49
3479 12676 0.889186 ACCACGGGATGCTTTGACAC 60.889 55.000 0.00 0.00 0.00 3.67
3480 12677 0.179004 AACCACGGGATGCTTTGACA 60.179 50.000 0.00 0.00 0.00 3.58
3481 12678 1.737793 CTAACCACGGGATGCTTTGAC 59.262 52.381 0.00 0.00 0.00 3.18
3482 12679 1.339631 CCTAACCACGGGATGCTTTGA 60.340 52.381 0.00 0.00 0.00 2.69
3483 12680 1.094785 CCTAACCACGGGATGCTTTG 58.905 55.000 0.00 0.00 0.00 2.77
3484 12681 0.679960 GCCTAACCACGGGATGCTTT 60.680 55.000 0.00 0.00 0.00 3.51
3485 12682 1.077716 GCCTAACCACGGGATGCTT 60.078 57.895 0.00 0.00 0.00 3.91
3486 12683 1.562672 AAGCCTAACCACGGGATGCT 61.563 55.000 0.00 0.00 0.00 3.79
3487 12684 0.679960 AAAGCCTAACCACGGGATGC 60.680 55.000 0.00 0.00 0.00 3.91
3488 12685 1.472480 CAAAAGCCTAACCACGGGATG 59.528 52.381 0.00 0.00 0.00 3.51
3489 12686 1.353022 TCAAAAGCCTAACCACGGGAT 59.647 47.619 0.00 0.00 0.00 3.85
3490 12687 0.766131 TCAAAAGCCTAACCACGGGA 59.234 50.000 0.00 0.00 0.00 5.14
3491 12688 1.165270 CTCAAAAGCCTAACCACGGG 58.835 55.000 0.00 0.00 0.00 5.28
3492 12689 2.076863 CTCTCAAAAGCCTAACCACGG 58.923 52.381 0.00 0.00 0.00 4.94
3493 12690 2.767505 ACTCTCAAAAGCCTAACCACG 58.232 47.619 0.00 0.00 0.00 4.94
3494 12691 4.578928 TCAAACTCTCAAAAGCCTAACCAC 59.421 41.667 0.00 0.00 0.00 4.16
3495 12692 4.578928 GTCAAACTCTCAAAAGCCTAACCA 59.421 41.667 0.00 0.00 0.00 3.67
3496 12693 4.822350 AGTCAAACTCTCAAAAGCCTAACC 59.178 41.667 0.00 0.00 0.00 2.85
3497 12694 5.333416 CGAGTCAAACTCTCAAAAGCCTAAC 60.333 44.000 5.63 0.00 42.92 2.34
3498 12695 4.750098 CGAGTCAAACTCTCAAAAGCCTAA 59.250 41.667 5.63 0.00 42.92 2.69
3499 12696 4.202223 ACGAGTCAAACTCTCAAAAGCCTA 60.202 41.667 5.63 0.00 42.92 3.93
3500 12697 3.134458 CGAGTCAAACTCTCAAAAGCCT 58.866 45.455 5.63 0.00 42.92 4.58
3501 12698 2.872858 ACGAGTCAAACTCTCAAAAGCC 59.127 45.455 5.63 0.00 42.92 4.35
3502 12699 3.303395 CCACGAGTCAAACTCTCAAAAGC 60.303 47.826 5.63 0.00 42.92 3.51
3503 12700 3.871594 ACCACGAGTCAAACTCTCAAAAG 59.128 43.478 5.63 0.00 42.92 2.27
3504 12701 3.621268 CACCACGAGTCAAACTCTCAAAA 59.379 43.478 5.63 0.00 42.92 2.44
3505 12702 3.118920 TCACCACGAGTCAAACTCTCAAA 60.119 43.478 5.63 0.00 42.92 2.69
3506 12703 2.429250 TCACCACGAGTCAAACTCTCAA 59.571 45.455 5.63 0.00 42.92 3.02
3507 12704 2.028876 TCACCACGAGTCAAACTCTCA 58.971 47.619 5.63 0.00 42.92 3.27
3508 12705 2.223735 TGTCACCACGAGTCAAACTCTC 60.224 50.000 5.63 0.00 42.92 3.20
3509 12706 1.754803 TGTCACCACGAGTCAAACTCT 59.245 47.619 5.63 0.00 42.92 3.24
3510 12707 2.218953 TGTCACCACGAGTCAAACTC 57.781 50.000 0.00 0.00 41.71 3.01
3511 12708 2.277084 GTTGTCACCACGAGTCAAACT 58.723 47.619 0.00 0.00 0.00 2.66
3512 12709 1.005347 CGTTGTCACCACGAGTCAAAC 60.005 52.381 0.00 0.00 0.00 2.93
3513 12710 1.135053 TCGTTGTCACCACGAGTCAAA 60.135 47.619 0.00 0.00 0.00 2.69
3514 12711 0.456628 TCGTTGTCACCACGAGTCAA 59.543 50.000 0.00 0.00 0.00 3.18
3515 12712 0.456628 TTCGTTGTCACCACGAGTCA 59.543 50.000 4.11 0.00 37.20 3.41
3516 12713 1.257155 GTTTCGTTGTCACCACGAGTC 59.743 52.381 4.11 0.00 37.20 3.36
3517 12714 1.283736 GTTTCGTTGTCACCACGAGT 58.716 50.000 4.11 0.00 37.20 4.18
3518 12715 1.282817 TGTTTCGTTGTCACCACGAG 58.717 50.000 4.11 0.00 37.20 4.18
3519 12716 1.595328 CATGTTTCGTTGTCACCACGA 59.405 47.619 0.00 0.00 0.00 4.35
3520 12717 1.919839 GCATGTTTCGTTGTCACCACG 60.920 52.381 0.00 0.00 0.00 4.94
3521 12718 1.064803 TGCATGTTTCGTTGTCACCAC 59.935 47.619 0.00 0.00 0.00 4.16
3522 12719 1.383523 TGCATGTTTCGTTGTCACCA 58.616 45.000 0.00 0.00 0.00 4.17
3523 12720 2.318578 CATGCATGTTTCGTTGTCACC 58.681 47.619 18.91 0.00 0.00 4.02
3524 12721 1.715519 GCATGCATGTTTCGTTGTCAC 59.284 47.619 26.79 2.80 0.00 3.67
3525 12722 1.608109 AGCATGCATGTTTCGTTGTCA 59.392 42.857 26.79 0.00 0.00 3.58
3526 12723 1.980844 CAGCATGCATGTTTCGTTGTC 59.019 47.619 26.79 7.72 0.00 3.18
3527 12724 2.054687 CAGCATGCATGTTTCGTTGT 57.945 45.000 26.79 0.56 0.00 3.32
3546 12743 1.613437 TGGGAAAAAGCTTGCACTAGC 59.387 47.619 0.00 1.95 41.53 3.42
3547 12744 4.051237 GTTTGGGAAAAAGCTTGCACTAG 58.949 43.478 0.00 0.00 0.00 2.57
3548 12745 3.449018 TGTTTGGGAAAAAGCTTGCACTA 59.551 39.130 0.00 0.00 0.00 2.74
3549 12746 2.235898 TGTTTGGGAAAAAGCTTGCACT 59.764 40.909 0.00 0.00 0.00 4.40
3550 12747 2.626840 TGTTTGGGAAAAAGCTTGCAC 58.373 42.857 0.00 0.00 0.00 4.57
3551 12748 3.055530 TCTTGTTTGGGAAAAAGCTTGCA 60.056 39.130 0.00 0.00 0.00 4.08
3552 12749 3.530535 TCTTGTTTGGGAAAAAGCTTGC 58.469 40.909 0.00 0.00 0.00 4.01
3553 12750 5.358922 TCATCTTGTTTGGGAAAAAGCTTG 58.641 37.500 0.00 0.00 0.00 4.01
3554 12751 5.612725 TCATCTTGTTTGGGAAAAAGCTT 57.387 34.783 0.00 0.00 0.00 3.74
3555 12752 5.612725 TTCATCTTGTTTGGGAAAAAGCT 57.387 34.783 0.00 0.00 0.00 3.74
3556 12753 6.676237 TTTTCATCTTGTTTGGGAAAAAGC 57.324 33.333 0.00 0.00 35.30 3.51
3557 12754 8.667076 AGATTTTCATCTTGTTTGGGAAAAAG 57.333 30.769 0.00 0.00 39.85 2.27
3558 12755 7.714813 GGAGATTTTCATCTTGTTTGGGAAAAA 59.285 33.333 0.00 0.00 40.14 1.94
3559 12756 7.147585 TGGAGATTTTCATCTTGTTTGGGAAAA 60.148 33.333 0.00 0.00 40.14 2.29
3560 12757 6.326064 TGGAGATTTTCATCTTGTTTGGGAAA 59.674 34.615 0.00 0.00 40.14 3.13
3561 12758 5.837979 TGGAGATTTTCATCTTGTTTGGGAA 59.162 36.000 0.00 0.00 40.14 3.97
3562 12759 5.392995 TGGAGATTTTCATCTTGTTTGGGA 58.607 37.500 0.00 0.00 40.14 4.37
3563 12760 5.726980 TGGAGATTTTCATCTTGTTTGGG 57.273 39.130 0.00 0.00 40.14 4.12
3564 12761 6.752168 AGTTGGAGATTTTCATCTTGTTTGG 58.248 36.000 0.00 0.00 40.14 3.28
3565 12762 6.865205 GGAGTTGGAGATTTTCATCTTGTTTG 59.135 38.462 0.00 0.00 40.14 2.93
3566 12763 6.779539 AGGAGTTGGAGATTTTCATCTTGTTT 59.220 34.615 0.00 0.00 40.14 2.83
3567 12764 6.310149 AGGAGTTGGAGATTTTCATCTTGTT 58.690 36.000 0.00 0.00 40.14 2.83
3568 12765 5.885465 AGGAGTTGGAGATTTTCATCTTGT 58.115 37.500 0.00 0.00 40.14 3.16
3569 12766 7.108847 ACTAGGAGTTGGAGATTTTCATCTTG 58.891 38.462 0.00 0.00 40.14 3.02
3570 12767 7.264294 ACTAGGAGTTGGAGATTTTCATCTT 57.736 36.000 0.00 0.00 40.14 2.40
3571 12768 6.882768 ACTAGGAGTTGGAGATTTTCATCT 57.117 37.500 0.00 0.00 43.03 2.90
3572 12769 7.556844 TGTACTAGGAGTTGGAGATTTTCATC 58.443 38.462 0.00 0.00 0.00 2.92
3573 12770 7.496346 TGTACTAGGAGTTGGAGATTTTCAT 57.504 36.000 0.00 0.00 0.00 2.57
3574 12771 6.928348 TGTACTAGGAGTTGGAGATTTTCA 57.072 37.500 0.00 0.00 0.00 2.69
3575 12772 6.258947 GCATGTACTAGGAGTTGGAGATTTTC 59.741 42.308 0.00 0.00 0.00 2.29
3576 12773 6.116126 GCATGTACTAGGAGTTGGAGATTTT 58.884 40.000 0.00 0.00 0.00 1.82
3577 12774 5.189736 TGCATGTACTAGGAGTTGGAGATTT 59.810 40.000 0.00 0.00 0.00 2.17
3578 12775 4.716784 TGCATGTACTAGGAGTTGGAGATT 59.283 41.667 0.00 0.00 0.00 2.40
3579 12776 4.290093 TGCATGTACTAGGAGTTGGAGAT 58.710 43.478 0.00 0.00 0.00 2.75
3580 12777 3.708451 TGCATGTACTAGGAGTTGGAGA 58.292 45.455 0.00 0.00 0.00 3.71
3581 12778 4.375272 CATGCATGTACTAGGAGTTGGAG 58.625 47.826 18.91 0.00 0.00 3.86
3582 12779 3.432186 GCATGCATGTACTAGGAGTTGGA 60.432 47.826 26.79 0.00 0.00 3.53
3583 12780 2.874701 GCATGCATGTACTAGGAGTTGG 59.125 50.000 26.79 0.00 0.00 3.77
3584 12781 3.801698 AGCATGCATGTACTAGGAGTTG 58.198 45.455 26.79 0.00 0.00 3.16
3585 12782 4.651503 ACTAGCATGCATGTACTAGGAGTT 59.348 41.667 29.48 15.79 37.11 3.01
3586 12783 4.219115 ACTAGCATGCATGTACTAGGAGT 58.781 43.478 29.48 17.85 37.11 3.85
3587 12784 4.862902 ACTAGCATGCATGTACTAGGAG 57.137 45.455 29.48 17.39 37.11 3.69
3588 12785 5.137551 TGTACTAGCATGCATGTACTAGGA 58.862 41.667 32.86 24.17 37.11 2.94
3589 12786 5.453567 TGTACTAGCATGCATGTACTAGG 57.546 43.478 32.86 18.75 37.11 3.02
3590 12787 5.403766 GCTTGTACTAGCATGCATGTACTAG 59.596 44.000 32.87 32.87 40.89 2.57
3591 12788 5.069119 AGCTTGTACTAGCATGCATGTACTA 59.931 40.000 32.86 28.31 43.68 1.82
3592 12789 4.122776 GCTTGTACTAGCATGCATGTACT 58.877 43.478 32.86 18.39 40.89 2.73
3593 12790 4.122776 AGCTTGTACTAGCATGCATGTAC 58.877 43.478 29.84 29.84 43.68 2.90
3594 12791 4.406648 AGCTTGTACTAGCATGCATGTA 57.593 40.909 27.17 18.20 43.68 2.29
3595 12792 3.272574 AGCTTGTACTAGCATGCATGT 57.727 42.857 27.17 19.24 43.68 3.21
3596 12793 3.624410 TGAAGCTTGTACTAGCATGCATG 59.376 43.478 27.17 22.70 43.68 4.06
3597 12794 3.877559 TGAAGCTTGTACTAGCATGCAT 58.122 40.909 27.17 7.44 43.68 3.96
3598 12795 3.333029 TGAAGCTTGTACTAGCATGCA 57.667 42.857 27.17 19.03 43.68 3.96
3599 12796 4.406943 GTTTGAAGCTTGTACTAGCATGC 58.593 43.478 27.17 10.51 43.68 4.06
3600 12797 4.388773 TCGTTTGAAGCTTGTACTAGCATG 59.611 41.667 27.17 13.77 43.68 4.06
3601 12798 4.566004 TCGTTTGAAGCTTGTACTAGCAT 58.434 39.130 27.17 18.07 43.68 3.79
3602 12799 3.985008 TCGTTTGAAGCTTGTACTAGCA 58.015 40.909 27.17 7.77 43.68 3.49
3603 12800 4.625742 TCATCGTTTGAAGCTTGTACTAGC 59.374 41.667 19.89 19.89 41.53 3.42
3604 12801 5.633601 TGTCATCGTTTGAAGCTTGTACTAG 59.366 40.000 2.10 0.00 35.70 2.57
3605 12802 5.534407 TGTCATCGTTTGAAGCTTGTACTA 58.466 37.500 2.10 0.00 35.70 1.82
3606 12803 4.377021 TGTCATCGTTTGAAGCTTGTACT 58.623 39.130 2.10 0.00 35.70 2.73
3607 12804 4.447724 TCTGTCATCGTTTGAAGCTTGTAC 59.552 41.667 2.10 0.00 35.70 2.90
3608 12805 4.627058 TCTGTCATCGTTTGAAGCTTGTA 58.373 39.130 2.10 0.00 35.70 2.41
3609 12806 3.466836 TCTGTCATCGTTTGAAGCTTGT 58.533 40.909 2.10 0.00 35.70 3.16
3610 12807 3.120408 CCTCTGTCATCGTTTGAAGCTTG 60.120 47.826 2.10 0.00 35.70 4.01
3611 12808 3.070018 CCTCTGTCATCGTTTGAAGCTT 58.930 45.455 0.00 0.00 35.70 3.74
3612 12809 2.300152 TCCTCTGTCATCGTTTGAAGCT 59.700 45.455 0.00 0.00 35.70 3.74
3613 12810 2.413453 GTCCTCTGTCATCGTTTGAAGC 59.587 50.000 0.00 0.00 35.70 3.86
3614 12811 3.677121 CAGTCCTCTGTCATCGTTTGAAG 59.323 47.826 0.00 0.00 35.70 3.02
3615 12812 3.320826 TCAGTCCTCTGTCATCGTTTGAA 59.679 43.478 0.00 0.00 41.91 2.69
3616 12813 2.890945 TCAGTCCTCTGTCATCGTTTGA 59.109 45.455 0.00 0.00 41.91 2.69
3617 12814 3.303881 TCAGTCCTCTGTCATCGTTTG 57.696 47.619 0.00 0.00 41.91 2.93
3618 12815 3.511540 TGATCAGTCCTCTGTCATCGTTT 59.488 43.478 0.00 0.00 41.91 3.60
3619 12816 3.092301 TGATCAGTCCTCTGTCATCGTT 58.908 45.455 0.00 0.00 41.91 3.85
3620 12817 2.728007 TGATCAGTCCTCTGTCATCGT 58.272 47.619 0.00 0.00 41.91 3.73
3621 12818 4.202090 TGAATGATCAGTCCTCTGTCATCG 60.202 45.833 19.70 0.00 39.27 3.84
3622 12819 5.273674 TGAATGATCAGTCCTCTGTCATC 57.726 43.478 19.70 0.00 39.27 2.92
3623 12820 5.130643 ACATGAATGATCAGTCCTCTGTCAT 59.869 40.000 19.70 3.31 40.49 3.06
3624 12821 4.468868 ACATGAATGATCAGTCCTCTGTCA 59.531 41.667 19.70 0.90 41.91 3.58
3625 12822 4.809958 CACATGAATGATCAGTCCTCTGTC 59.190 45.833 19.70 0.00 41.91 3.51
3626 12823 4.224594 ACACATGAATGATCAGTCCTCTGT 59.775 41.667 19.70 16.33 41.91 3.41
3627 12824 4.767478 ACACATGAATGATCAGTCCTCTG 58.233 43.478 19.70 15.76 39.39 3.35
3628 12825 4.141756 GGACACATGAATGATCAGTCCTCT 60.142 45.833 19.70 2.74 40.57 3.69
3629 12826 4.125703 GGACACATGAATGATCAGTCCTC 58.874 47.826 19.70 6.94 40.57 3.71
3630 12827 3.520721 TGGACACATGAATGATCAGTCCT 59.479 43.478 19.70 7.91 43.31 3.85
3631 12828 3.875727 CTGGACACATGAATGATCAGTCC 59.124 47.826 19.70 18.21 43.24 3.85
3632 12829 3.311871 GCTGGACACATGAATGATCAGTC 59.688 47.826 16.08 16.08 39.39 3.51
3633 12830 3.276857 GCTGGACACATGAATGATCAGT 58.723 45.455 0.00 0.00 39.39 3.41
3634 12831 3.275999 TGCTGGACACATGAATGATCAG 58.724 45.455 0.00 3.42 39.39 2.90
3635 12832 3.353370 TGCTGGACACATGAATGATCA 57.647 42.857 0.00 0.00 40.57 2.92
3636 12833 3.693085 AGTTGCTGGACACATGAATGATC 59.307 43.478 0.00 0.00 0.00 2.92
3637 12834 3.693807 AGTTGCTGGACACATGAATGAT 58.306 40.909 0.00 0.00 0.00 2.45
3638 12835 3.144657 AGTTGCTGGACACATGAATGA 57.855 42.857 0.00 0.00 0.00 2.57
3639 12836 3.928727 AAGTTGCTGGACACATGAATG 57.071 42.857 0.00 0.00 0.00 2.67
3640 12837 3.638160 ACAAAGTTGCTGGACACATGAAT 59.362 39.130 0.00 0.00 0.00 2.57
3641 12838 3.023119 ACAAAGTTGCTGGACACATGAA 58.977 40.909 0.00 0.00 0.00 2.57
3642 12839 2.618241 GACAAAGTTGCTGGACACATGA 59.382 45.455 0.00 0.00 0.00 3.07
3643 12840 2.287788 GGACAAAGTTGCTGGACACATG 60.288 50.000 0.00 0.00 0.00 3.21
3644 12841 1.956477 GGACAAAGTTGCTGGACACAT 59.044 47.619 0.00 0.00 0.00 3.21
3645 12842 1.064758 AGGACAAAGTTGCTGGACACA 60.065 47.619 0.00 0.00 0.00 3.72
3646 12843 1.604278 GAGGACAAAGTTGCTGGACAC 59.396 52.381 0.00 0.00 0.00 3.67
3647 12844 1.476833 GGAGGACAAAGTTGCTGGACA 60.477 52.381 0.00 0.00 0.00 4.02
3648 12845 1.202818 AGGAGGACAAAGTTGCTGGAC 60.203 52.381 0.00 0.00 0.00 4.02
3649 12846 1.072331 GAGGAGGACAAAGTTGCTGGA 59.928 52.381 0.00 0.00 0.00 3.86
3650 12847 1.202806 TGAGGAGGACAAAGTTGCTGG 60.203 52.381 0.00 0.00 0.00 4.85
3651 12848 1.876156 GTGAGGAGGACAAAGTTGCTG 59.124 52.381 0.00 0.00 0.00 4.41
3652 12849 1.490490 TGTGAGGAGGACAAAGTTGCT 59.510 47.619 0.00 0.00 0.00 3.91
3653 12850 1.876156 CTGTGAGGAGGACAAAGTTGC 59.124 52.381 0.00 0.00 0.00 4.17
3654 12851 2.498167 CCTGTGAGGAGGACAAAGTTG 58.502 52.381 0.00 0.00 37.67 3.16
3655 12852 1.421646 CCCTGTGAGGAGGACAAAGTT 59.578 52.381 0.00 0.00 37.67 2.66
3656 12853 1.059913 CCCTGTGAGGAGGACAAAGT 58.940 55.000 0.00 0.00 37.67 2.66
3657 12854 1.352083 TCCCTGTGAGGAGGACAAAG 58.648 55.000 0.00 0.00 37.67 2.77
3658 12855 3.569827 TCCCTGTGAGGAGGACAAA 57.430 52.632 0.00 0.00 37.67 2.83
3665 12862 1.133167 TCTGTTGTCTCCCTGTGAGGA 60.133 52.381 0.00 0.00 41.76 3.71
3666 12863 1.342074 TCTGTTGTCTCCCTGTGAGG 58.658 55.000 0.00 0.00 41.76 3.86
3667 12864 2.564504 TCATCTGTTGTCTCCCTGTGAG 59.435 50.000 0.00 0.00 42.90 3.51
3668 12865 2.608623 TCATCTGTTGTCTCCCTGTGA 58.391 47.619 0.00 0.00 0.00 3.58
3669 12866 3.070018 GTTCATCTGTTGTCTCCCTGTG 58.930 50.000 0.00 0.00 0.00 3.66
3670 12867 2.289072 CGTTCATCTGTTGTCTCCCTGT 60.289 50.000 0.00 0.00 0.00 4.00
3671 12868 2.341257 CGTTCATCTGTTGTCTCCCTG 58.659 52.381 0.00 0.00 0.00 4.45
3672 12869 1.338200 GCGTTCATCTGTTGTCTCCCT 60.338 52.381 0.00 0.00 0.00 4.20
3673 12870 1.079503 GCGTTCATCTGTTGTCTCCC 58.920 55.000 0.00 0.00 0.00 4.30
3674 12871 2.086054 AGCGTTCATCTGTTGTCTCC 57.914 50.000 0.00 0.00 0.00 3.71
3675 12872 2.600867 GCTAGCGTTCATCTGTTGTCTC 59.399 50.000 0.00 0.00 0.00 3.36
3676 12873 2.232452 AGCTAGCGTTCATCTGTTGTCT 59.768 45.455 9.55 0.00 0.00 3.41
3677 12874 2.600867 GAGCTAGCGTTCATCTGTTGTC 59.399 50.000 9.55 0.00 0.00 3.18
3678 12875 2.611518 GAGCTAGCGTTCATCTGTTGT 58.388 47.619 9.55 0.00 0.00 3.32
3679 12876 1.929836 GGAGCTAGCGTTCATCTGTTG 59.070 52.381 9.55 0.00 0.00 3.33
3680 12877 1.550524 TGGAGCTAGCGTTCATCTGTT 59.449 47.619 9.55 0.00 0.00 3.16
3681 12878 1.135915 CTGGAGCTAGCGTTCATCTGT 59.864 52.381 9.55 0.00 0.00 3.41
3682 12879 1.406898 TCTGGAGCTAGCGTTCATCTG 59.593 52.381 9.55 1.59 0.00 2.90
3683 12880 1.769026 TCTGGAGCTAGCGTTCATCT 58.231 50.000 9.55 0.00 0.00 2.90
3684 12881 2.810439 ATCTGGAGCTAGCGTTCATC 57.190 50.000 9.55 0.17 0.00 2.92
3685 12882 3.384789 TGTTATCTGGAGCTAGCGTTCAT 59.615 43.478 9.55 1.96 0.00 2.57
3686 12883 2.758423 TGTTATCTGGAGCTAGCGTTCA 59.242 45.455 9.55 8.19 0.00 3.18
3687 12884 3.117046 GTGTTATCTGGAGCTAGCGTTC 58.883 50.000 9.55 1.82 0.00 3.95
3688 12885 2.159085 GGTGTTATCTGGAGCTAGCGTT 60.159 50.000 9.55 0.00 0.00 4.84
3689 12886 1.409427 GGTGTTATCTGGAGCTAGCGT 59.591 52.381 9.55 0.00 0.00 5.07
3690 12887 1.269831 GGGTGTTATCTGGAGCTAGCG 60.270 57.143 9.55 0.00 0.00 4.26
3691 12888 1.762957 TGGGTGTTATCTGGAGCTAGC 59.237 52.381 6.62 6.62 0.00 3.42
3692 12889 3.706594 TCTTGGGTGTTATCTGGAGCTAG 59.293 47.826 0.00 0.00 0.00 3.42
3693 12890 3.719871 TCTTGGGTGTTATCTGGAGCTA 58.280 45.455 0.00 0.00 0.00 3.32
3694 12891 2.551270 TCTTGGGTGTTATCTGGAGCT 58.449 47.619 0.00 0.00 0.00 4.09
3695 12892 3.350219 TTCTTGGGTGTTATCTGGAGC 57.650 47.619 0.00 0.00 0.00 4.70
3696 12893 4.019321 TCCTTTCTTGGGTGTTATCTGGAG 60.019 45.833 0.00 0.00 0.00 3.86
3697 12894 3.913799 TCCTTTCTTGGGTGTTATCTGGA 59.086 43.478 0.00 0.00 0.00 3.86
3698 12895 4.263506 ACTCCTTTCTTGGGTGTTATCTGG 60.264 45.833 0.00 0.00 0.00 3.86
3699 12896 4.911390 ACTCCTTTCTTGGGTGTTATCTG 58.089 43.478 0.00 0.00 0.00 2.90
3700 12897 4.597507 TGACTCCTTTCTTGGGTGTTATCT 59.402 41.667 0.00 0.00 31.76 1.98
3701 12898 4.906618 TGACTCCTTTCTTGGGTGTTATC 58.093 43.478 0.00 0.00 31.76 1.75
3702 12899 4.993705 TGACTCCTTTCTTGGGTGTTAT 57.006 40.909 0.00 0.00 31.76 1.89
3703 12900 4.165372 AGTTGACTCCTTTCTTGGGTGTTA 59.835 41.667 0.00 0.00 31.76 2.41
3704 12901 3.053619 AGTTGACTCCTTTCTTGGGTGTT 60.054 43.478 0.00 0.00 31.76 3.32
3705 12902 2.509964 AGTTGACTCCTTTCTTGGGTGT 59.490 45.455 0.00 0.00 33.90 4.16
3706 12903 2.880890 CAGTTGACTCCTTTCTTGGGTG 59.119 50.000 0.00 0.00 0.00 4.61
3707 12904 2.777692 TCAGTTGACTCCTTTCTTGGGT 59.222 45.455 0.00 0.00 0.00 4.51
3708 12905 3.492102 TCAGTTGACTCCTTTCTTGGG 57.508 47.619 0.00 0.00 0.00 4.12
3709 12906 3.565902 GGTTCAGTTGACTCCTTTCTTGG 59.434 47.826 0.00 0.00 0.00 3.61
3710 12907 3.565902 GGGTTCAGTTGACTCCTTTCTTG 59.434 47.826 3.63 0.00 0.00 3.02
3711 12908 3.459969 AGGGTTCAGTTGACTCCTTTCTT 59.540 43.478 0.00 0.00 0.00 2.52
3712 12909 3.049344 AGGGTTCAGTTGACTCCTTTCT 58.951 45.455 0.00 0.00 0.00 2.52
3713 12910 3.493767 AGGGTTCAGTTGACTCCTTTC 57.506 47.619 0.00 0.00 0.00 2.62
3714 12911 6.697641 TTATAGGGTTCAGTTGACTCCTTT 57.302 37.500 7.48 4.04 31.78 3.11
3715 12912 5.338463 GCTTATAGGGTTCAGTTGACTCCTT 60.338 44.000 7.48 1.72 31.78 3.36
3716 12913 4.162509 GCTTATAGGGTTCAGTTGACTCCT 59.837 45.833 7.37 7.37 33.28 3.69
3717 12914 4.081087 TGCTTATAGGGTTCAGTTGACTCC 60.081 45.833 0.00 0.00 0.00 3.85
3718 12915 5.086104 TGCTTATAGGGTTCAGTTGACTC 57.914 43.478 0.00 0.00 0.00 3.36
3719 12916 4.777896 TCTGCTTATAGGGTTCAGTTGACT 59.222 41.667 0.00 0.00 0.00 3.41
3720 12917 4.870991 GTCTGCTTATAGGGTTCAGTTGAC 59.129 45.833 0.00 0.00 0.00 3.18
3721 12918 4.081087 GGTCTGCTTATAGGGTTCAGTTGA 60.081 45.833 0.00 0.00 0.00 3.18
3722 12919 4.192317 GGTCTGCTTATAGGGTTCAGTTG 58.808 47.826 0.00 0.00 0.00 3.16
3723 12920 3.118738 CGGTCTGCTTATAGGGTTCAGTT 60.119 47.826 0.00 0.00 0.00 3.16
3724 12921 2.431057 CGGTCTGCTTATAGGGTTCAGT 59.569 50.000 0.00 0.00 0.00 3.41
3725 12922 2.693591 TCGGTCTGCTTATAGGGTTCAG 59.306 50.000 0.00 0.00 0.00 3.02
3726 12923 2.693591 CTCGGTCTGCTTATAGGGTTCA 59.306 50.000 0.00 0.00 0.00 3.18
3727 12924 2.546162 GCTCGGTCTGCTTATAGGGTTC 60.546 54.545 0.00 0.00 0.00 3.62
3728 12925 1.413077 GCTCGGTCTGCTTATAGGGTT 59.587 52.381 0.00 0.00 0.00 4.11
3729 12926 1.041437 GCTCGGTCTGCTTATAGGGT 58.959 55.000 0.00 0.00 0.00 4.34
3730 12927 1.040646 TGCTCGGTCTGCTTATAGGG 58.959 55.000 0.00 0.00 0.00 3.53
3731 12928 1.269831 GGTGCTCGGTCTGCTTATAGG 60.270 57.143 0.00 0.00 0.00 2.57
3732 12929 1.683917 AGGTGCTCGGTCTGCTTATAG 59.316 52.381 0.00 0.00 0.00 1.31
3733 12930 1.776662 AGGTGCTCGGTCTGCTTATA 58.223 50.000 0.00 0.00 0.00 0.98
3734 12931 0.905357 AAGGTGCTCGGTCTGCTTAT 59.095 50.000 0.00 0.00 0.00 1.73
3735 12932 0.246635 GAAGGTGCTCGGTCTGCTTA 59.753 55.000 0.00 0.00 0.00 3.09
3736 12933 1.004440 GAAGGTGCTCGGTCTGCTT 60.004 57.895 0.00 0.00 0.00 3.91
3737 12934 2.164865 CTGAAGGTGCTCGGTCTGCT 62.165 60.000 0.00 0.00 0.00 4.24
3738 12935 1.739562 CTGAAGGTGCTCGGTCTGC 60.740 63.158 0.00 0.00 0.00 4.26
3739 12936 1.079543 CCTGAAGGTGCTCGGTCTG 60.080 63.158 0.00 0.00 0.00 3.51
3740 12937 2.948720 GCCTGAAGGTGCTCGGTCT 61.949 63.158 0.00 0.00 37.57 3.85
3741 12938 2.435059 GCCTGAAGGTGCTCGGTC 60.435 66.667 0.00 0.00 37.57 4.79
3742 12939 4.021925 GGCCTGAAGGTGCTCGGT 62.022 66.667 0.00 0.00 37.57 4.69
3743 12940 3.259633 AAGGCCTGAAGGTGCTCGG 62.260 63.158 5.69 0.00 37.57 4.63
3744 12941 2.037136 CAAGGCCTGAAGGTGCTCG 61.037 63.158 5.69 0.00 37.57 5.03
3745 12942 0.538287 AACAAGGCCTGAAGGTGCTC 60.538 55.000 5.69 0.00 37.57 4.26
3746 12943 0.538287 GAACAAGGCCTGAAGGTGCT 60.538 55.000 5.69 0.00 37.57 4.40
3747 12944 1.856265 CGAACAAGGCCTGAAGGTGC 61.856 60.000 5.69 0.00 37.57 5.01
3748 12945 1.237285 CCGAACAAGGCCTGAAGGTG 61.237 60.000 5.69 2.00 37.57 4.00
3749 12946 1.073199 CCGAACAAGGCCTGAAGGT 59.927 57.895 5.69 0.00 37.57 3.50
3750 12947 0.537371 AACCGAACAAGGCCTGAAGG 60.537 55.000 5.69 8.82 38.53 3.46
3751 12948 2.076863 CTAACCGAACAAGGCCTGAAG 58.923 52.381 5.69 1.47 33.69 3.02
3752 12949 1.271163 CCTAACCGAACAAGGCCTGAA 60.271 52.381 5.69 0.00 33.69 3.02
3753 12950 0.323629 CCTAACCGAACAAGGCCTGA 59.676 55.000 5.69 0.00 33.69 3.86
3754 12951 2.854522 CCTAACCGAACAAGGCCTG 58.145 57.895 5.69 2.82 33.69 4.85
3758 12955 0.676782 CCCTGCCTAACCGAACAAGG 60.677 60.000 0.00 0.00 37.30 3.61
3759 12956 0.036306 ACCCTGCCTAACCGAACAAG 59.964 55.000 0.00 0.00 0.00 3.16
3760 12957 0.475044 AACCCTGCCTAACCGAACAA 59.525 50.000 0.00 0.00 0.00 2.83
3761 12958 0.475044 AAACCCTGCCTAACCGAACA 59.525 50.000 0.00 0.00 0.00 3.18
3762 12959 0.879090 CAAACCCTGCCTAACCGAAC 59.121 55.000 0.00 0.00 0.00 3.95
3763 12960 0.766131 TCAAACCCTGCCTAACCGAA 59.234 50.000 0.00 0.00 0.00 4.30
3764 12961 0.766131 TTCAAACCCTGCCTAACCGA 59.234 50.000 0.00 0.00 0.00 4.69
3765 12962 1.165270 CTTCAAACCCTGCCTAACCG 58.835 55.000 0.00 0.00 0.00 4.44
3766 12963 2.437413 CTCTTCAAACCCTGCCTAACC 58.563 52.381 0.00 0.00 0.00 2.85
3767 12964 2.224793 ACCTCTTCAAACCCTGCCTAAC 60.225 50.000 0.00 0.00 0.00 2.34
3768 12965 2.062636 ACCTCTTCAAACCCTGCCTAA 58.937 47.619 0.00 0.00 0.00 2.69
3769 12966 1.742308 ACCTCTTCAAACCCTGCCTA 58.258 50.000 0.00 0.00 0.00 3.93
3770 12967 0.853530 AACCTCTTCAAACCCTGCCT 59.146 50.000 0.00 0.00 0.00 4.75
3771 12968 1.341209 CAAACCTCTTCAAACCCTGCC 59.659 52.381 0.00 0.00 0.00 4.85
3772 12969 2.306847 TCAAACCTCTTCAAACCCTGC 58.693 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.