Multiple sequence alignment - TraesCS1B01G074400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G074400 chr1B 100.000 2981 0 0 1 2981 57764551 57767531 0.000000e+00 5505.0
1 TraesCS1B01G074400 chr1B 95.604 182 7 1 729 910 61612224 61612044 1.050000e-74 291.0
2 TraesCS1B01G074400 chr1B 93.617 188 10 2 739 926 538865240 538865425 2.260000e-71 279.0
3 TraesCS1B01G074400 chr1B 93.548 186 11 1 734 919 317418582 317418398 2.930000e-70 276.0
4 TraesCS1B01G074400 chr1B 89.412 85 8 1 2898 2981 628048157 628048241 4.060000e-19 106.0
5 TraesCS1B01G074400 chr1D 92.127 1575 77 21 912 2469 37955435 37956979 0.000000e+00 2178.0
6 TraesCS1B01G074400 chr1D 86.780 764 28 18 1 714 37954664 37955404 0.000000e+00 784.0
7 TraesCS1B01G074400 chr1D 87.654 81 8 2 2899 2978 97208808 97208887 3.160000e-15 93.5
8 TraesCS1B01G074400 chr1A 95.007 681 31 3 912 1591 37439759 37440437 0.000000e+00 1066.0
9 TraesCS1B01G074400 chr1A 86.179 738 47 29 1 714 37439022 37439728 0.000000e+00 747.0
10 TraesCS1B01G074400 chr1A 90.573 541 35 6 1620 2144 37460339 37460879 0.000000e+00 702.0
11 TraesCS1B01G074400 chr1A 88.571 420 32 6 1741 2144 37440437 37440856 2.060000e-136 496.0
12 TraesCS1B01G074400 chr5B 89.066 439 26 13 2467 2899 482309210 482308788 2.630000e-145 525.0
13 TraesCS1B01G074400 chr5B 97.093 172 5 0 739 910 346616165 346616336 1.050000e-74 291.0
14 TraesCS1B01G074400 chr5B 93.684 190 9 3 735 922 363665476 363665288 6.290000e-72 281.0
15 TraesCS1B01G074400 chr5B 93.443 61 2 2 2467 2526 686530813 686530754 4.090000e-14 89.8
16 TraesCS1B01G074400 chr5B 87.097 62 6 1 2475 2534 192858746 192858685 5.330000e-08 69.4
17 TraesCS1B01G074400 chr5B 100.000 30 0 0 2900 2929 600160359 600160388 4.150000e-04 56.5
18 TraesCS1B01G074400 chr3B 83.827 439 45 10 2467 2899 768743934 768744352 7.740000e-106 394.0
19 TraesCS1B01G074400 chr3B 90.984 122 8 2 1322 1443 629595340 629595458 8.550000e-36 161.0
20 TraesCS1B01G074400 chr2B 83.371 439 47 12 2467 2899 529258336 529258754 1.680000e-102 383.0
21 TraesCS1B01G074400 chr2B 90.686 204 15 4 724 927 107378958 107378759 4.900000e-68 268.0
22 TraesCS1B01G074400 chr3D 87.987 308 26 8 2474 2779 612532417 612532119 1.310000e-93 353.0
23 TraesCS1B01G074400 chr6D 80.499 441 50 23 2467 2899 393645253 393644841 3.730000e-79 305.0
24 TraesCS1B01G074400 chr6D 90.984 122 8 1 1322 1443 226777102 226777220 8.550000e-36 161.0
25 TraesCS1B01G074400 chr7B 92.893 197 13 1 729 924 523238638 523238834 4.860000e-73 285.0
26 TraesCS1B01G074400 chr6B 94.086 186 11 0 725 910 213152567 213152382 1.750000e-72 283.0
27 TraesCS1B01G074400 chr6B 90.984 122 8 2 1322 1443 217774808 217774690 8.550000e-36 161.0
28 TraesCS1B01G074400 chr6B 95.294 85 2 2 2898 2981 87744689 87744772 1.860000e-27 134.0
29 TraesCS1B01G074400 chr6B 91.111 45 4 0 2471 2515 577483747 577483791 8.920000e-06 62.1
30 TraesCS1B01G074400 chr6A 93.617 188 12 0 732 919 586033071 586032884 6.290000e-72 281.0
31 TraesCS1B01G074400 chr6A 90.244 82 7 1 2893 2973 9368297 9368378 4.060000e-19 106.0
32 TraesCS1B01G074400 chr4A 82.131 291 24 15 2482 2772 564954726 564954464 1.080000e-54 224.0
33 TraesCS1B01G074400 chr4A 91.803 122 7 2 1322 1443 598702580 598702462 1.840000e-37 167.0
34 TraesCS1B01G074400 chr4A 88.525 122 11 2 1322 1443 377603302 377603184 8.610000e-31 145.0
35 TraesCS1B01G074400 chr4A 93.617 47 1 2 2849 2895 564954427 564954383 5.330000e-08 69.4
36 TraesCS1B01G074400 chr5A 91.803 122 7 2 1322 1443 382763456 382763574 1.840000e-37 167.0
37 TraesCS1B01G074400 chr5A 87.705 122 12 2 1322 1443 136824397 136824515 4.010000e-29 139.0
38 TraesCS1B01G074400 chr4B 93.506 77 2 1 2897 2970 647801011 647801087 8.730000e-21 111.0
39 TraesCS1B01G074400 chr2A 86.905 84 9 2 2899 2981 16500069 16500151 3.160000e-15 93.5
40 TraesCS1B01G074400 chr3A 85.000 80 5 2 2900 2972 514615172 514615251 1.150000e-09 75.0
41 TraesCS1B01G074400 chr5D 100.000 28 0 0 2900 2927 487603114 487603141 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G074400 chr1B 57764551 57767531 2980 False 5505.000000 5505 100.0000 1 2981 1 chr1B.!!$F1 2980
1 TraesCS1B01G074400 chr1D 37954664 37956979 2315 False 1481.000000 2178 89.4535 1 2469 2 chr1D.!!$F2 2468
2 TraesCS1B01G074400 chr1A 37439022 37440856 1834 False 769.666667 1066 89.9190 1 2144 3 chr1A.!!$F2 2143
3 TraesCS1B01G074400 chr1A 37460339 37460879 540 False 702.000000 702 90.5730 1620 2144 1 chr1A.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 905 0.316937 CGTCAGCACACACGCATTTT 60.317 50.0 0.00 0.00 0.0 1.82 F
1356 1428 0.387878 CCTACATCGAGGCGCTGATC 60.388 60.0 7.64 2.24 0.0 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1853 1928 0.033405 AGCAGCTGGAGCATGGAAAT 60.033 50.0 17.12 0.0 45.16 2.17 R
2903 3001 0.034059 AGCCATACACATAGCTCCGC 59.966 55.0 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.577468 TCGCGAAGTGCTGAAAAAGA 58.423 45.000 6.20 0.00 43.27 2.52
75 76 4.436050 CGCGAAGTGCTGAAAAAGATATGT 60.436 41.667 0.00 0.00 43.27 2.29
189 191 6.642950 GGATGTACGGTCATCTATTCTTTGAG 59.357 42.308 17.15 0.00 42.45 3.02
330 332 5.835113 ATATTTGGTGAATTCGGACTTGG 57.165 39.130 0.04 0.00 0.00 3.61
367 371 2.128771 ATGTACAGTTGGATGGGTGC 57.871 50.000 0.33 0.00 0.00 5.01
373 377 0.907704 AGTTGGATGGGTGCCGTAGA 60.908 55.000 0.00 0.00 0.00 2.59
458 462 1.325355 CAATCCATGATCTGCCACCC 58.675 55.000 0.00 0.00 0.00 4.61
606 657 7.767261 TGCCAATTTACAAGGTTGTACATATC 58.233 34.615 0.00 0.00 42.84 1.63
607 658 7.613801 TGCCAATTTACAAGGTTGTACATATCT 59.386 33.333 0.00 0.00 42.84 1.98
608 659 9.116067 GCCAATTTACAAGGTTGTACATATCTA 57.884 33.333 0.00 0.00 42.84 1.98
670 723 2.397597 ACTGGAAATTGCCAACCTTGT 58.602 42.857 6.62 0.00 37.52 3.16
675 728 2.888834 AATTGCCAACCTTGTGTGAC 57.111 45.000 0.00 0.00 0.00 3.67
695 748 6.024049 GTGACTAGAATTGCCATCGAAAAAG 58.976 40.000 0.00 0.00 0.00 2.27
697 750 6.128282 TGACTAGAATTGCCATCGAAAAAGTC 60.128 38.462 0.00 0.00 0.00 3.01
698 751 5.705441 ACTAGAATTGCCATCGAAAAAGTCA 59.295 36.000 0.00 0.00 0.00 3.41
727 799 3.440173 AGTGCCACGTCTTATCATTTTGG 59.560 43.478 0.00 0.00 0.00 3.28
728 800 3.190535 GTGCCACGTCTTATCATTTTGGT 59.809 43.478 0.00 0.00 0.00 3.67
729 801 3.823873 TGCCACGTCTTATCATTTTGGTT 59.176 39.130 0.00 0.00 0.00 3.67
730 802 5.004448 TGCCACGTCTTATCATTTTGGTTA 58.996 37.500 0.00 0.00 0.00 2.85
731 803 5.473846 TGCCACGTCTTATCATTTTGGTTAA 59.526 36.000 0.00 0.00 0.00 2.01
732 804 6.016192 TGCCACGTCTTATCATTTTGGTTAAA 60.016 34.615 0.00 0.00 0.00 1.52
733 805 7.033185 GCCACGTCTTATCATTTTGGTTAAAT 58.967 34.615 0.00 0.00 36.90 1.40
734 806 7.544217 GCCACGTCTTATCATTTTGGTTAAATT 59.456 33.333 0.00 0.00 34.19 1.82
735 807 9.418045 CCACGTCTTATCATTTTGGTTAAATTT 57.582 29.630 0.00 0.00 34.19 1.82
743 815 7.527568 TCATTTTGGTTAAATTTACGGGAGT 57.472 32.000 0.00 0.00 39.61 3.85
744 816 8.632906 TCATTTTGGTTAAATTTACGGGAGTA 57.367 30.769 0.00 0.00 38.12 2.59
745 817 8.513774 TCATTTTGGTTAAATTTACGGGAGTAC 58.486 33.333 0.00 0.00 38.54 2.73
746 818 6.816134 TTTGGTTAAATTTACGGGAGTACC 57.184 37.500 0.00 1.98 46.62 3.34
747 819 5.760484 TGGTTAAATTTACGGGAGTACCT 57.240 39.130 12.10 0.00 46.62 3.08
748 820 6.865834 TGGTTAAATTTACGGGAGTACCTA 57.134 37.500 12.10 0.50 46.62 3.08
749 821 6.877236 TGGTTAAATTTACGGGAGTACCTAG 58.123 40.000 12.10 0.00 46.62 3.02
750 822 6.667414 TGGTTAAATTTACGGGAGTACCTAGA 59.333 38.462 12.10 0.00 46.62 2.43
751 823 7.180051 TGGTTAAATTTACGGGAGTACCTAGAA 59.820 37.037 12.10 0.00 46.62 2.10
752 824 7.492669 GGTTAAATTTACGGGAGTACCTAGAAC 59.507 40.741 0.00 0.00 46.62 3.01
753 825 6.864151 AAATTTACGGGAGTACCTAGAACT 57.136 37.500 0.00 0.00 46.62 3.01
754 826 6.462552 AATTTACGGGAGTACCTAGAACTC 57.537 41.667 13.84 13.84 46.62 3.01
755 827 4.574674 TTACGGGAGTACCTAGAACTCA 57.425 45.455 20.28 4.18 46.62 3.41
756 828 3.666345 ACGGGAGTACCTAGAACTCAT 57.334 47.619 20.28 8.06 44.25 2.90
757 829 3.553904 ACGGGAGTACCTAGAACTCATC 58.446 50.000 20.28 13.40 44.25 2.92
758 830 3.202595 ACGGGAGTACCTAGAACTCATCT 59.797 47.826 20.28 5.35 44.25 2.90
759 831 4.411540 ACGGGAGTACCTAGAACTCATCTA 59.588 45.833 20.28 0.00 44.25 1.98
795 867 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
796 868 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
797 869 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
798 870 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
799 871 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
800 872 6.914757 GGTCTCATTCACTTTGAAAACAAGAG 59.085 38.462 0.00 0.00 40.12 2.85
801 873 6.416161 GTCTCATTCACTTTGAAAACAAGAGC 59.584 38.462 0.00 0.00 40.12 4.09
802 874 6.095300 TCTCATTCACTTTGAAAACAAGAGCA 59.905 34.615 0.00 0.00 40.12 4.26
803 875 6.267817 TCATTCACTTTGAAAACAAGAGCAG 58.732 36.000 0.00 0.00 40.12 4.24
804 876 5.895636 TTCACTTTGAAAACAAGAGCAGA 57.104 34.783 0.00 0.00 32.71 4.26
805 877 6.455360 TTCACTTTGAAAACAAGAGCAGAT 57.545 33.333 0.00 0.00 32.71 2.90
806 878 7.566760 TTCACTTTGAAAACAAGAGCAGATA 57.433 32.000 0.00 0.00 32.71 1.98
807 879 7.750229 TCACTTTGAAAACAAGAGCAGATAT 57.250 32.000 0.00 0.00 0.00 1.63
808 880 8.846943 TCACTTTGAAAACAAGAGCAGATATA 57.153 30.769 0.00 0.00 0.00 0.86
809 881 9.283768 TCACTTTGAAAACAAGAGCAGATATAA 57.716 29.630 0.00 0.00 0.00 0.98
812 884 9.727627 CTTTGAAAACAAGAGCAGATATAATCC 57.272 33.333 0.00 0.00 0.00 3.01
813 885 8.806429 TTGAAAACAAGAGCAGATATAATCCA 57.194 30.769 0.00 0.00 0.00 3.41
814 886 8.213518 TGAAAACAAGAGCAGATATAATCCAC 57.786 34.615 0.00 0.00 0.00 4.02
815 887 6.851222 AAACAAGAGCAGATATAATCCACG 57.149 37.500 0.00 0.00 0.00 4.94
816 888 5.537300 ACAAGAGCAGATATAATCCACGT 57.463 39.130 0.00 0.00 0.00 4.49
817 889 5.533482 ACAAGAGCAGATATAATCCACGTC 58.467 41.667 0.00 0.00 0.00 4.34
818 890 5.069119 ACAAGAGCAGATATAATCCACGTCA 59.931 40.000 0.00 0.00 0.00 4.35
819 891 5.384063 AGAGCAGATATAATCCACGTCAG 57.616 43.478 0.00 0.00 0.00 3.51
820 892 3.919216 AGCAGATATAATCCACGTCAGC 58.081 45.455 0.00 0.00 0.00 4.26
821 893 3.321968 AGCAGATATAATCCACGTCAGCA 59.678 43.478 0.00 0.00 0.00 4.41
822 894 3.430218 GCAGATATAATCCACGTCAGCAC 59.570 47.826 0.00 0.00 0.00 4.40
823 895 4.620982 CAGATATAATCCACGTCAGCACA 58.379 43.478 0.00 0.00 0.00 4.57
824 896 4.445718 CAGATATAATCCACGTCAGCACAC 59.554 45.833 0.00 0.00 0.00 3.82
825 897 2.760634 ATAATCCACGTCAGCACACA 57.239 45.000 0.00 0.00 0.00 3.72
826 898 1.790755 TAATCCACGTCAGCACACAC 58.209 50.000 0.00 0.00 0.00 3.82
827 899 1.221466 AATCCACGTCAGCACACACG 61.221 55.000 0.00 0.00 41.90 4.49
828 900 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
829 901 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
830 902 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
831 903 1.887242 ACGTCAGCACACACGCATT 60.887 52.632 0.00 0.00 39.73 3.56
832 904 1.279539 CGTCAGCACACACGCATTT 59.720 52.632 0.00 0.00 0.00 2.32
833 905 0.316937 CGTCAGCACACACGCATTTT 60.317 50.000 0.00 0.00 0.00 1.82
834 906 1.070242 CGTCAGCACACACGCATTTTA 60.070 47.619 0.00 0.00 0.00 1.52
835 907 2.412716 CGTCAGCACACACGCATTTTAT 60.413 45.455 0.00 0.00 0.00 1.40
836 908 3.181525 CGTCAGCACACACGCATTTTATA 60.182 43.478 0.00 0.00 0.00 0.98
837 909 4.334443 GTCAGCACACACGCATTTTATAG 58.666 43.478 0.00 0.00 0.00 1.31
838 910 3.100817 CAGCACACACGCATTTTATAGC 58.899 45.455 0.00 0.00 0.00 2.97
839 911 2.746904 AGCACACACGCATTTTATAGCA 59.253 40.909 0.00 0.00 0.00 3.49
840 912 3.378112 AGCACACACGCATTTTATAGCAT 59.622 39.130 0.00 0.00 0.00 3.79
841 913 3.725740 GCACACACGCATTTTATAGCATC 59.274 43.478 0.00 0.00 0.00 3.91
842 914 4.730324 GCACACACGCATTTTATAGCATCA 60.730 41.667 0.00 0.00 0.00 3.07
843 915 4.730042 CACACACGCATTTTATAGCATCAC 59.270 41.667 0.00 0.00 0.00 3.06
844 916 4.394610 ACACACGCATTTTATAGCATCACA 59.605 37.500 0.00 0.00 0.00 3.58
845 917 5.066375 ACACACGCATTTTATAGCATCACAT 59.934 36.000 0.00 0.00 0.00 3.21
846 918 5.622448 CACACGCATTTTATAGCATCACATC 59.378 40.000 0.00 0.00 0.00 3.06
847 919 5.149273 CACGCATTTTATAGCATCACATCC 58.851 41.667 0.00 0.00 0.00 3.51
848 920 4.821260 ACGCATTTTATAGCATCACATCCA 59.179 37.500 0.00 0.00 0.00 3.41
849 921 5.299028 ACGCATTTTATAGCATCACATCCAA 59.701 36.000 0.00 0.00 0.00 3.53
850 922 6.016024 ACGCATTTTATAGCATCACATCCAAT 60.016 34.615 0.00 0.00 0.00 3.16
851 923 6.307077 CGCATTTTATAGCATCACATCCAATG 59.693 38.462 0.00 0.00 0.00 2.82
852 924 6.588756 GCATTTTATAGCATCACATCCAATGG 59.411 38.462 0.00 0.00 33.60 3.16
853 925 5.710513 TTTATAGCATCACATCCAATGGC 57.289 39.130 0.00 0.00 33.60 4.40
854 926 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
855 927 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
856 928 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
857 929 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
858 930 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
859 931 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
860 932 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
861 933 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
862 934 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
863 935 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
864 936 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
865 937 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
866 938 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
867 939 6.840705 ACATCCAATGGCTATAAAAGGTGAAT 59.159 34.615 0.00 0.00 33.60 2.57
868 940 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
869 941 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
870 942 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
871 943 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
872 944 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
873 945 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
874 946 4.511826 GGCTATAAAAGGTGAATGAGACCG 59.488 45.833 0.00 0.00 38.64 4.79
875 947 5.357257 GCTATAAAAGGTGAATGAGACCGA 58.643 41.667 0.00 0.00 38.64 4.69
876 948 5.815740 GCTATAAAAGGTGAATGAGACCGAA 59.184 40.000 0.00 0.00 38.64 4.30
877 949 6.483640 GCTATAAAAGGTGAATGAGACCGAAT 59.516 38.462 0.00 0.00 38.64 3.34
878 950 7.012421 GCTATAAAAGGTGAATGAGACCGAATT 59.988 37.037 0.00 0.00 38.64 2.17
879 951 9.542462 CTATAAAAGGTGAATGAGACCGAATTA 57.458 33.333 0.00 0.00 38.64 1.40
880 952 8.980481 ATAAAAGGTGAATGAGACCGAATTAT 57.020 30.769 0.00 0.00 38.64 1.28
882 954 8.980481 AAAAGGTGAATGAGACCGAATTATAT 57.020 30.769 0.00 0.00 38.64 0.86
883 955 8.608844 AAAGGTGAATGAGACCGAATTATATC 57.391 34.615 0.00 0.00 38.64 1.63
884 956 7.546250 AGGTGAATGAGACCGAATTATATCT 57.454 36.000 0.00 0.00 38.64 1.98
885 957 7.607250 AGGTGAATGAGACCGAATTATATCTC 58.393 38.462 5.69 5.69 38.64 2.75
943 1015 6.996879 ACTATGCATGCATGTTCTTCTCTAAT 59.003 34.615 37.43 13.95 37.82 1.73
947 1019 6.183360 TGCATGCATGTTCTTCTCTAATTGAG 60.183 38.462 26.79 0.00 43.96 3.02
950 1022 8.549548 CATGCATGTTCTTCTCTAATTGAGTAG 58.450 37.037 18.91 0.00 43.13 2.57
957 1029 9.640963 GTTCTTCTCTAATTGAGTAGCAGTAAA 57.359 33.333 0.00 0.00 43.13 2.01
966 1038 5.748670 TGAGTAGCAGTAAACATGGGTTA 57.251 39.130 0.00 0.00 35.82 2.85
967 1039 5.484715 TGAGTAGCAGTAAACATGGGTTAC 58.515 41.667 11.64 11.64 35.82 2.50
1012 1084 1.202268 GCTGATCAATGGAGTGCAAGC 60.202 52.381 0.00 0.00 0.00 4.01
1071 1143 4.641645 CTTGGAGCCACGGCCACA 62.642 66.667 2.24 0.95 43.17 4.17
1354 1426 1.753078 ACCTACATCGAGGCGCTGA 60.753 57.895 7.64 3.33 40.65 4.26
1356 1428 0.387878 CCTACATCGAGGCGCTGATC 60.388 60.000 7.64 2.24 0.00 2.92
1410 1482 1.221293 CTGCCTCTTCCTCTGGCTG 59.779 63.158 0.00 0.00 46.23 4.85
1574 1646 0.457851 GAGATGCACGAGTACCTGCT 59.542 55.000 8.71 0.00 34.29 4.24
1930 2005 4.666105 GGCTTTCCCAGGATGTCC 57.334 61.111 0.00 0.00 0.00 4.02
1932 2007 0.332972 GGCTTTCCCAGGATGTCCTT 59.667 55.000 0.00 0.00 46.09 3.36
1933 2008 1.467920 GCTTTCCCAGGATGTCCTTG 58.532 55.000 0.00 0.00 46.09 3.61
1976 2055 0.737367 ACGATGATGGCAGTGTCGTG 60.737 55.000 18.64 1.56 43.07 4.35
2024 2106 5.008811 GCATGAGAATGAAGGATCCTTGAAG 59.991 44.000 31.79 11.09 36.26 3.02
2130 2218 3.941836 GCTATGCCGGCGTTGCTC 61.942 66.667 37.17 17.48 32.50 4.26
2179 2267 1.805945 CGGACGACACAGCCTAAGC 60.806 63.158 0.00 0.00 40.32 3.09
2228 2320 2.291024 TGGCTTAATTACCGGCTTTGGA 60.291 45.455 0.00 0.00 0.00 3.53
2247 2339 1.153509 GCATTCCATGGTGCTTGGC 60.154 57.895 17.81 8.50 38.30 4.52
2249 2341 0.899720 CATTCCATGGTGCTTGGCTT 59.100 50.000 12.58 0.00 34.06 4.35
2251 2343 1.186917 TTCCATGGTGCTTGGCTTGG 61.187 55.000 12.58 0.00 34.06 3.61
2252 2344 1.607178 CCATGGTGCTTGGCTTGGA 60.607 57.895 2.57 0.00 0.00 3.53
2253 2345 1.588082 CATGGTGCTTGGCTTGGAC 59.412 57.895 0.00 0.00 0.00 4.02
2254 2346 1.607467 ATGGTGCTTGGCTTGGACC 60.607 57.895 12.33 12.33 44.62 4.46
2255 2347 2.203480 GGTGCTTGGCTTGGACCA 60.203 61.111 13.80 0.00 43.95 4.02
2256 2348 2.564721 GGTGCTTGGCTTGGACCAC 61.565 63.158 13.80 0.00 43.95 4.16
2257 2349 1.529244 GTGCTTGGCTTGGACCACT 60.529 57.895 0.00 0.00 40.19 4.00
2258 2350 1.228245 TGCTTGGCTTGGACCACTC 60.228 57.895 0.00 0.00 40.19 3.51
2259 2351 1.973812 GCTTGGCTTGGACCACTCC 60.974 63.158 0.00 0.00 40.19 3.85
2260 2352 1.455849 CTTGGCTTGGACCACTCCA 59.544 57.895 9.30 9.30 45.68 3.86
2266 2358 3.455152 TGGACCACTCCACTCGTG 58.545 61.111 0.00 0.00 42.15 4.35
2267 2359 2.048127 GGACCACTCCACTCGTGC 60.048 66.667 0.00 0.00 36.42 5.34
2268 2360 2.574955 GGACCACTCCACTCGTGCT 61.575 63.158 0.00 0.00 36.42 4.40
2269 2361 1.367840 GACCACTCCACTCGTGCTT 59.632 57.895 0.00 0.00 0.00 3.91
2270 2362 0.667792 GACCACTCCACTCGTGCTTC 60.668 60.000 0.00 0.00 0.00 3.86
2271 2363 1.367471 CCACTCCACTCGTGCTTCA 59.633 57.895 0.00 0.00 0.00 3.02
2272 2364 0.668706 CCACTCCACTCGTGCTTCAG 60.669 60.000 0.00 0.00 0.00 3.02
2273 2365 0.315251 CACTCCACTCGTGCTTCAGA 59.685 55.000 0.00 0.00 0.00 3.27
2283 2375 1.068472 CGTGCTTCAGACGTACTCCTT 60.068 52.381 0.00 0.00 32.06 3.36
2292 2384 0.879765 ACGTACTCCTTCACAGTCGG 59.120 55.000 0.00 0.00 0.00 4.79
2293 2385 0.879765 CGTACTCCTTCACAGTCGGT 59.120 55.000 0.00 0.00 0.00 4.69
2294 2386 1.135746 CGTACTCCTTCACAGTCGGTC 60.136 57.143 0.00 0.00 0.00 4.79
2320 2412 2.627515 TGCAAGCATGGGAGATAGTC 57.372 50.000 0.00 0.00 0.00 2.59
2334 2426 6.266330 TGGGAGATAGTCATACAAGTCTCATG 59.734 42.308 0.00 0.00 35.09 3.07
2338 2430 6.777091 AGATAGTCATACAAGTCTCATGAGCT 59.223 38.462 18.36 14.84 29.64 4.09
2339 2431 5.674052 AGTCATACAAGTCTCATGAGCTT 57.326 39.130 18.36 19.41 29.64 3.74
2340 2432 6.782082 AGTCATACAAGTCTCATGAGCTTA 57.218 37.500 23.23 14.38 29.64 3.09
2493 2591 8.417884 AGCTATCTCACATCTACTTTTCTAACC 58.582 37.037 0.00 0.00 0.00 2.85
2494 2592 8.198109 GCTATCTCACATCTACTTTTCTAACCA 58.802 37.037 0.00 0.00 0.00 3.67
2495 2593 9.522804 CTATCTCACATCTACTTTTCTAACCAC 57.477 37.037 0.00 0.00 0.00 4.16
2496 2594 7.297936 TCTCACATCTACTTTTCTAACCACA 57.702 36.000 0.00 0.00 0.00 4.17
2497 2595 7.907389 TCTCACATCTACTTTTCTAACCACAT 58.093 34.615 0.00 0.00 0.00 3.21
2498 2596 7.819415 TCTCACATCTACTTTTCTAACCACATG 59.181 37.037 0.00 0.00 0.00 3.21
2499 2597 7.676004 TCACATCTACTTTTCTAACCACATGA 58.324 34.615 0.00 0.00 0.00 3.07
2500 2598 8.321353 TCACATCTACTTTTCTAACCACATGAT 58.679 33.333 0.00 0.00 0.00 2.45
2501 2599 8.950210 CACATCTACTTTTCTAACCACATGATT 58.050 33.333 0.00 0.00 0.00 2.57
2502 2600 9.520515 ACATCTACTTTTCTAACCACATGATTT 57.479 29.630 0.00 0.00 0.00 2.17
2507 2605 8.918202 ACTTTTCTAACCACATGATTTAGACA 57.082 30.769 0.00 0.00 32.74 3.41
2508 2606 9.520515 ACTTTTCTAACCACATGATTTAGACAT 57.479 29.630 0.00 0.00 32.74 3.06
2509 2607 9.994432 CTTTTCTAACCACATGATTTAGACATC 57.006 33.333 0.00 0.00 32.74 3.06
2510 2608 9.513906 TTTTCTAACCACATGATTTAGACATCA 57.486 29.630 0.00 0.00 37.58 3.07
2511 2609 9.513906 TTTCTAACCACATGATTTAGACATCAA 57.486 29.630 0.00 0.00 36.74 2.57
2512 2610 8.722480 TCTAACCACATGATTTAGACATCAAG 57.278 34.615 0.00 0.00 36.74 3.02
2513 2611 8.539544 TCTAACCACATGATTTAGACATCAAGA 58.460 33.333 0.00 0.00 36.74 3.02
2514 2612 9.334947 CTAACCACATGATTTAGACATCAAGAT 57.665 33.333 0.00 0.00 36.74 2.40
2515 2613 8.585471 AACCACATGATTTAGACATCAAGATT 57.415 30.769 0.00 0.00 36.74 2.40
2516 2614 9.685276 AACCACATGATTTAGACATCAAGATTA 57.315 29.630 0.00 0.00 36.74 1.75
2517 2615 9.334947 ACCACATGATTTAGACATCAAGATTAG 57.665 33.333 0.00 0.00 36.74 1.73
2518 2616 9.334947 CCACATGATTTAGACATCAAGATTAGT 57.665 33.333 0.00 0.00 36.74 2.24
2562 2660 5.984233 TGATTGATACATTTCCTGTACGC 57.016 39.130 0.00 0.00 43.01 4.42
2563 2661 4.506288 TGATTGATACATTTCCTGTACGCG 59.494 41.667 3.53 3.53 43.01 6.01
2564 2662 3.513680 TGATACATTTCCTGTACGCGT 57.486 42.857 19.17 19.17 43.01 6.01
2565 2663 3.852286 TGATACATTTCCTGTACGCGTT 58.148 40.909 20.78 0.80 43.01 4.84
2566 2664 4.996344 TGATACATTTCCTGTACGCGTTA 58.004 39.130 20.78 6.36 43.01 3.18
2567 2665 4.799949 TGATACATTTCCTGTACGCGTTAC 59.200 41.667 20.78 14.25 43.01 2.50
2568 2666 3.308438 ACATTTCCTGTACGCGTTACT 57.692 42.857 20.78 0.00 35.91 2.24
2569 2667 3.248266 ACATTTCCTGTACGCGTTACTC 58.752 45.455 20.78 6.77 35.91 2.59
2570 2668 1.967762 TTTCCTGTACGCGTTACTCG 58.032 50.000 20.78 8.96 43.12 4.18
2593 2691 4.728102 CGCCCGTCGTGCCAGTAA 62.728 66.667 0.00 0.00 0.00 2.24
2594 2692 2.813908 GCCCGTCGTGCCAGTAAG 60.814 66.667 0.00 0.00 0.00 2.34
2595 2693 2.813908 CCCGTCGTGCCAGTAAGC 60.814 66.667 0.00 0.00 0.00 3.09
2596 2694 2.813908 CCGTCGTGCCAGTAAGCC 60.814 66.667 0.00 0.00 0.00 4.35
2597 2695 3.179265 CGTCGTGCCAGTAAGCCG 61.179 66.667 0.00 0.00 0.00 5.52
2598 2696 3.488090 GTCGTGCCAGTAAGCCGC 61.488 66.667 0.00 0.00 0.00 6.53
2599 2697 3.691342 TCGTGCCAGTAAGCCGCT 61.691 61.111 0.00 0.00 0.00 5.52
2600 2698 3.490759 CGTGCCAGTAAGCCGCTG 61.491 66.667 0.00 0.00 0.00 5.18
2601 2699 2.358737 GTGCCAGTAAGCCGCTGT 60.359 61.111 0.00 0.00 32.41 4.40
2602 2700 1.079405 GTGCCAGTAAGCCGCTGTA 60.079 57.895 0.00 0.00 32.41 2.74
2603 2701 1.084370 GTGCCAGTAAGCCGCTGTAG 61.084 60.000 0.00 0.00 32.41 2.74
2604 2702 1.254975 TGCCAGTAAGCCGCTGTAGA 61.255 55.000 0.00 0.00 32.41 2.59
2605 2703 0.105039 GCCAGTAAGCCGCTGTAGAT 59.895 55.000 0.00 0.00 32.41 1.98
2606 2704 1.870167 GCCAGTAAGCCGCTGTAGATC 60.870 57.143 0.00 0.00 32.41 2.75
2607 2705 1.269831 CCAGTAAGCCGCTGTAGATCC 60.270 57.143 0.00 0.00 32.41 3.36
2608 2706 1.409064 CAGTAAGCCGCTGTAGATCCA 59.591 52.381 0.00 0.00 0.00 3.41
2609 2707 2.036475 CAGTAAGCCGCTGTAGATCCAT 59.964 50.000 0.00 0.00 0.00 3.41
2610 2708 2.700897 AGTAAGCCGCTGTAGATCCATT 59.299 45.455 0.00 0.00 0.00 3.16
2611 2709 2.717639 AAGCCGCTGTAGATCCATTT 57.282 45.000 0.00 0.00 0.00 2.32
2612 2710 1.959042 AGCCGCTGTAGATCCATTTG 58.041 50.000 0.00 0.00 0.00 2.32
2613 2711 1.486310 AGCCGCTGTAGATCCATTTGA 59.514 47.619 0.00 0.00 0.00 2.69
2614 2712 2.092968 AGCCGCTGTAGATCCATTTGAA 60.093 45.455 0.00 0.00 0.00 2.69
2615 2713 2.880890 GCCGCTGTAGATCCATTTGAAT 59.119 45.455 0.00 0.00 0.00 2.57
2616 2714 3.316308 GCCGCTGTAGATCCATTTGAATT 59.684 43.478 0.00 0.00 0.00 2.17
2617 2715 4.202050 GCCGCTGTAGATCCATTTGAATTT 60.202 41.667 0.00 0.00 0.00 1.82
2618 2716 5.276270 CCGCTGTAGATCCATTTGAATTTG 58.724 41.667 0.00 0.00 0.00 2.32
2619 2717 5.163622 CCGCTGTAGATCCATTTGAATTTGT 60.164 40.000 0.00 0.00 0.00 2.83
2620 2718 6.324819 CGCTGTAGATCCATTTGAATTTGTT 58.675 36.000 0.00 0.00 0.00 2.83
2621 2719 6.470235 CGCTGTAGATCCATTTGAATTTGTTC 59.530 38.462 0.00 0.00 0.00 3.18
2622 2720 6.753744 GCTGTAGATCCATTTGAATTTGTTCC 59.246 38.462 0.00 0.00 0.00 3.62
2623 2721 7.363268 GCTGTAGATCCATTTGAATTTGTTCCT 60.363 37.037 0.00 0.00 0.00 3.36
2624 2722 8.055279 TGTAGATCCATTTGAATTTGTTCCTC 57.945 34.615 0.00 0.00 0.00 3.71
2625 2723 6.199937 AGATCCATTTGAATTTGTTCCTCG 57.800 37.500 0.00 0.00 0.00 4.63
2626 2724 5.711976 AGATCCATTTGAATTTGTTCCTCGT 59.288 36.000 0.00 0.00 0.00 4.18
2627 2725 5.119931 TCCATTTGAATTTGTTCCTCGTG 57.880 39.130 0.00 0.00 0.00 4.35
2628 2726 4.582656 TCCATTTGAATTTGTTCCTCGTGT 59.417 37.500 0.00 0.00 0.00 4.49
2629 2727 4.681025 CCATTTGAATTTGTTCCTCGTGTG 59.319 41.667 0.00 0.00 0.00 3.82
2630 2728 4.974368 TTTGAATTTGTTCCTCGTGTGT 57.026 36.364 0.00 0.00 0.00 3.72
2631 2729 3.961477 TGAATTTGTTCCTCGTGTGTG 57.039 42.857 0.00 0.00 0.00 3.82
2632 2730 2.032799 TGAATTTGTTCCTCGTGTGTGC 59.967 45.455 0.00 0.00 0.00 4.57
2633 2731 0.951558 ATTTGTTCCTCGTGTGTGCC 59.048 50.000 0.00 0.00 0.00 5.01
2634 2732 0.107410 TTTGTTCCTCGTGTGTGCCT 60.107 50.000 0.00 0.00 0.00 4.75
2635 2733 0.531974 TTGTTCCTCGTGTGTGCCTC 60.532 55.000 0.00 0.00 0.00 4.70
2636 2734 2.022129 GTTCCTCGTGTGTGCCTCG 61.022 63.158 0.00 0.00 0.00 4.63
2637 2735 2.495409 TTCCTCGTGTGTGCCTCGT 61.495 57.895 0.00 0.00 0.00 4.18
2638 2736 2.023414 TTCCTCGTGTGTGCCTCGTT 62.023 55.000 0.00 0.00 0.00 3.85
2639 2737 2.310233 CCTCGTGTGTGCCTCGTTG 61.310 63.158 0.00 0.00 0.00 4.10
2640 2738 2.279851 TCGTGTGTGCCTCGTTGG 60.280 61.111 0.00 0.00 39.35 3.77
2649 2747 3.343972 CCTCGTTGGCTGTTGTGG 58.656 61.111 0.00 0.00 0.00 4.17
2650 2748 2.639286 CTCGTTGGCTGTTGTGGC 59.361 61.111 0.00 0.00 0.00 5.01
2651 2749 1.893808 CTCGTTGGCTGTTGTGGCT 60.894 57.895 0.00 0.00 0.00 4.75
2652 2750 0.602638 CTCGTTGGCTGTTGTGGCTA 60.603 55.000 0.00 0.00 0.00 3.93
2653 2751 0.882927 TCGTTGGCTGTTGTGGCTAC 60.883 55.000 0.00 0.00 35.63 3.58
2654 2752 1.163420 CGTTGGCTGTTGTGGCTACA 61.163 55.000 0.00 0.00 37.90 2.74
2655 2753 1.028905 GTTGGCTGTTGTGGCTACAA 58.971 50.000 12.09 12.09 44.17 2.41
2656 2754 1.001378 GTTGGCTGTTGTGGCTACAAG 60.001 52.381 16.71 6.71 46.75 3.16
2657 2755 0.182537 TGGCTGTTGTGGCTACAAGT 59.817 50.000 16.71 0.00 46.75 3.16
2658 2756 0.593128 GGCTGTTGTGGCTACAAGTG 59.407 55.000 16.71 12.54 46.75 3.16
2659 2757 1.593196 GCTGTTGTGGCTACAAGTGA 58.407 50.000 16.71 2.65 46.75 3.41
2660 2758 1.946768 GCTGTTGTGGCTACAAGTGAA 59.053 47.619 16.71 1.95 46.75 3.18
2661 2759 2.287009 GCTGTTGTGGCTACAAGTGAAC 60.287 50.000 16.71 5.44 46.75 3.18
2662 2760 2.942376 CTGTTGTGGCTACAAGTGAACA 59.058 45.455 16.71 10.01 46.75 3.18
2663 2761 3.550820 TGTTGTGGCTACAAGTGAACAT 58.449 40.909 16.71 0.00 46.75 2.71
2664 2762 3.951037 TGTTGTGGCTACAAGTGAACATT 59.049 39.130 16.71 0.00 46.75 2.71
2665 2763 4.400884 TGTTGTGGCTACAAGTGAACATTT 59.599 37.500 16.71 0.00 46.75 2.32
2666 2764 5.105554 TGTTGTGGCTACAAGTGAACATTTT 60.106 36.000 16.71 0.00 46.75 1.82
2667 2765 5.590530 TGTGGCTACAAGTGAACATTTTT 57.409 34.783 0.00 0.00 32.88 1.94
2668 2766 5.587289 TGTGGCTACAAGTGAACATTTTTC 58.413 37.500 0.00 0.00 32.88 2.29
2669 2767 5.126222 TGTGGCTACAAGTGAACATTTTTCA 59.874 36.000 0.00 0.00 32.88 2.69
2670 2768 6.039616 GTGGCTACAAGTGAACATTTTTCAA 58.960 36.000 0.00 0.00 0.00 2.69
2671 2769 6.701400 GTGGCTACAAGTGAACATTTTTCAAT 59.299 34.615 0.00 0.00 0.00 2.57
2672 2770 7.224557 GTGGCTACAAGTGAACATTTTTCAATT 59.775 33.333 0.00 0.00 37.22 2.32
2673 2771 7.768120 TGGCTACAAGTGAACATTTTTCAATTT 59.232 29.630 0.00 0.00 34.96 1.82
2674 2772 8.611757 GGCTACAAGTGAACATTTTTCAATTTT 58.388 29.630 0.00 0.00 34.96 1.82
2675 2773 9.636965 GCTACAAGTGAACATTTTTCAATTTTC 57.363 29.630 0.00 0.00 34.96 2.29
2678 2776 9.218440 ACAAGTGAACATTTTTCAATTTTCTGT 57.782 25.926 0.00 0.00 34.96 3.41
2829 2927 9.743057 TTCTTTTCATCGTTGTTAATTGATTGT 57.257 25.926 0.00 0.00 0.00 2.71
2830 2928 9.393249 TCTTTTCATCGTTGTTAATTGATTGTC 57.607 29.630 0.00 0.00 0.00 3.18
2831 2929 8.514136 TTTTCATCGTTGTTAATTGATTGTCC 57.486 30.769 0.00 0.00 0.00 4.02
2832 2930 6.809630 TCATCGTTGTTAATTGATTGTCCA 57.190 33.333 0.00 0.00 0.00 4.02
2833 2931 6.607689 TCATCGTTGTTAATTGATTGTCCAC 58.392 36.000 0.00 0.00 0.00 4.02
2834 2932 5.365403 TCGTTGTTAATTGATTGTCCACC 57.635 39.130 0.00 0.00 0.00 4.61
2835 2933 4.822350 TCGTTGTTAATTGATTGTCCACCA 59.178 37.500 0.00 0.00 0.00 4.17
2836 2934 4.915085 CGTTGTTAATTGATTGTCCACCAC 59.085 41.667 0.00 0.00 0.00 4.16
2837 2935 5.227152 GTTGTTAATTGATTGTCCACCACC 58.773 41.667 0.00 0.00 0.00 4.61
2838 2936 4.474394 TGTTAATTGATTGTCCACCACCA 58.526 39.130 0.00 0.00 0.00 4.17
2839 2937 4.895889 TGTTAATTGATTGTCCACCACCAA 59.104 37.500 0.00 0.00 0.00 3.67
2840 2938 5.363868 TGTTAATTGATTGTCCACCACCAAA 59.636 36.000 0.00 0.00 0.00 3.28
2841 2939 4.335400 AATTGATTGTCCACCACCAAAC 57.665 40.909 0.00 0.00 0.00 2.93
2842 2940 2.443958 TGATTGTCCACCACCAAACA 57.556 45.000 0.00 0.00 0.00 2.83
2843 2941 2.956132 TGATTGTCCACCACCAAACAT 58.044 42.857 0.00 0.00 0.00 2.71
2844 2942 2.627221 TGATTGTCCACCACCAAACATG 59.373 45.455 0.00 0.00 0.00 3.21
2845 2943 1.407936 TTGTCCACCACCAAACATGG 58.592 50.000 0.00 0.00 43.43 3.66
2846 2944 0.468958 TGTCCACCACCAAACATGGG 60.469 55.000 0.00 0.00 41.97 4.00
2847 2945 0.469144 GTCCACCACCAAACATGGGT 60.469 55.000 0.00 0.00 41.97 4.51
2848 2946 0.263172 TCCACCACCAAACATGGGTT 59.737 50.000 0.00 0.00 41.97 4.11
2850 2948 1.488393 CCACCACCAAACATGGGTTTT 59.512 47.619 0.00 0.00 44.63 2.43
2851 2949 2.092699 CCACCACCAAACATGGGTTTTT 60.093 45.455 0.00 0.00 44.63 1.94
2874 2972 5.705609 TTTCTCAAATTGCAACTCTACCC 57.294 39.130 0.00 0.00 0.00 3.69
2875 2973 4.640771 TCTCAAATTGCAACTCTACCCT 57.359 40.909 0.00 0.00 0.00 4.34
2876 2974 4.579869 TCTCAAATTGCAACTCTACCCTC 58.420 43.478 0.00 0.00 0.00 4.30
2877 2975 4.041567 TCTCAAATTGCAACTCTACCCTCA 59.958 41.667 0.00 0.00 0.00 3.86
2878 2976 4.724399 TCAAATTGCAACTCTACCCTCAA 58.276 39.130 0.00 0.00 0.00 3.02
2879 2977 4.518970 TCAAATTGCAACTCTACCCTCAAC 59.481 41.667 0.00 0.00 0.00 3.18
2880 2978 4.373156 AATTGCAACTCTACCCTCAACT 57.627 40.909 0.00 0.00 0.00 3.16
2881 2979 3.857157 TTGCAACTCTACCCTCAACTT 57.143 42.857 0.00 0.00 0.00 2.66
2882 2980 3.126001 TGCAACTCTACCCTCAACTTG 57.874 47.619 0.00 0.00 0.00 3.16
2883 2981 1.807142 GCAACTCTACCCTCAACTTGC 59.193 52.381 0.00 0.00 0.00 4.01
2884 2982 2.810400 GCAACTCTACCCTCAACTTGCA 60.810 50.000 0.00 0.00 34.11 4.08
2885 2983 3.476552 CAACTCTACCCTCAACTTGCAA 58.523 45.455 0.00 0.00 0.00 4.08
2886 2984 3.127425 ACTCTACCCTCAACTTGCAAC 57.873 47.619 0.00 0.00 0.00 4.17
2887 2985 2.706190 ACTCTACCCTCAACTTGCAACT 59.294 45.455 0.00 0.00 0.00 3.16
2888 2986 3.244249 ACTCTACCCTCAACTTGCAACTC 60.244 47.826 0.00 0.00 0.00 3.01
2889 2987 2.069273 CTACCCTCAACTTGCAACTCG 58.931 52.381 0.00 0.00 0.00 4.18
2890 2988 0.535102 ACCCTCAACTTGCAACTCGG 60.535 55.000 0.00 0.00 0.00 4.63
2891 2989 1.237285 CCCTCAACTTGCAACTCGGG 61.237 60.000 0.00 0.00 0.00 5.14
2892 2990 1.576421 CTCAACTTGCAACTCGGGC 59.424 57.895 0.00 0.00 0.00 6.13
2893 2991 1.856265 CTCAACTTGCAACTCGGGCC 61.856 60.000 0.00 0.00 0.00 5.80
2894 2992 2.597510 AACTTGCAACTCGGGCCC 60.598 61.111 13.57 13.57 0.00 5.80
2896 2994 4.697756 CTTGCAACTCGGGCCCGA 62.698 66.667 42.62 42.62 46.87 5.14
2926 3024 3.329300 GCTATGTGTATGGCTGGGG 57.671 57.895 0.00 0.00 37.75 4.96
2927 3025 0.250901 GCTATGTGTATGGCTGGGGG 60.251 60.000 0.00 0.00 37.75 5.40
2953 3051 4.758982 CCCCCAAGCCTAGGATCT 57.241 61.111 14.75 0.00 0.00 2.75
2954 3052 2.951690 CCCCCAAGCCTAGGATCTT 58.048 57.895 14.75 4.16 0.00 2.40
2955 3053 0.767998 CCCCCAAGCCTAGGATCTTC 59.232 60.000 14.75 0.00 0.00 2.87
2956 3054 1.697291 CCCCCAAGCCTAGGATCTTCT 60.697 57.143 14.75 0.00 0.00 2.85
2957 3055 1.419387 CCCCAAGCCTAGGATCTTCTG 59.581 57.143 14.75 0.34 0.00 3.02
2958 3056 2.122768 CCCAAGCCTAGGATCTTCTGT 58.877 52.381 14.75 0.00 0.00 3.41
2959 3057 2.158842 CCCAAGCCTAGGATCTTCTGTG 60.159 54.545 14.75 0.00 0.00 3.66
2960 3058 2.768527 CCAAGCCTAGGATCTTCTGTGA 59.231 50.000 14.75 0.00 0.00 3.58
2961 3059 3.198635 CCAAGCCTAGGATCTTCTGTGAA 59.801 47.826 14.75 0.00 0.00 3.18
2962 3060 4.440880 CAAGCCTAGGATCTTCTGTGAAG 58.559 47.826 14.75 1.23 0.00 3.02
2963 3061 3.987745 AGCCTAGGATCTTCTGTGAAGA 58.012 45.455 14.75 11.69 0.00 2.87
2964 3062 4.555689 AGCCTAGGATCTTCTGTGAAGAT 58.444 43.478 14.75 19.02 39.53 2.40
2965 3063 4.968080 AGCCTAGGATCTTCTGTGAAGATT 59.032 41.667 14.75 10.52 37.14 2.40
2966 3064 5.428131 AGCCTAGGATCTTCTGTGAAGATTT 59.572 40.000 14.75 14.66 37.14 2.17
2967 3065 6.069731 AGCCTAGGATCTTCTGTGAAGATTTT 60.070 38.462 14.75 14.41 37.14 1.82
2968 3066 6.601217 GCCTAGGATCTTCTGTGAAGATTTTT 59.399 38.462 14.75 12.61 37.14 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.085250 CATATGATAACATGTAGATGAGCAGAC 57.915 37.037 6.90 0.00 37.87 3.51
373 377 8.190122 TGTAATGGTTTGTATTCGAGTACGTAT 58.810 33.333 12.72 1.42 40.69 3.06
377 381 7.585286 TGTGTAATGGTTTGTATTCGAGTAC 57.415 36.000 10.90 10.90 0.00 2.73
378 382 8.661257 CAATGTGTAATGGTTTGTATTCGAGTA 58.339 33.333 0.00 0.00 0.00 2.59
379 383 7.174253 ACAATGTGTAATGGTTTGTATTCGAGT 59.826 33.333 0.00 0.00 0.00 4.18
380 384 7.481483 CACAATGTGTAATGGTTTGTATTCGAG 59.519 37.037 5.00 0.00 0.00 4.04
381 385 7.041030 ACACAATGTGTAATGGTTTGTATTCGA 60.041 33.333 18.40 0.00 45.56 3.71
382 386 7.081349 ACACAATGTGTAATGGTTTGTATTCG 58.919 34.615 18.40 0.00 45.56 3.34
458 462 2.887783 AGATGTGCATACTAGGGACTCG 59.112 50.000 0.00 0.00 41.75 4.18
645 698 2.497273 GGTTGGCAATTTCCAGTAGCAT 59.503 45.455 1.92 0.00 37.44 3.79
648 701 3.573967 ACAAGGTTGGCAATTTCCAGTAG 59.426 43.478 1.92 0.00 37.44 2.57
649 702 3.320541 CACAAGGTTGGCAATTTCCAGTA 59.679 43.478 1.92 0.00 37.44 2.74
654 707 3.123050 GTCACACAAGGTTGGCAATTTC 58.877 45.455 1.92 0.00 0.00 2.17
670 723 3.885724 TCGATGGCAATTCTAGTCACA 57.114 42.857 0.00 0.00 0.00 3.58
675 728 6.182039 TGACTTTTTCGATGGCAATTCTAG 57.818 37.500 0.00 0.00 0.00 2.43
727 799 8.253810 AGTTCTAGGTACTCCCGTAAATTTAAC 58.746 37.037 0.00 0.00 41.75 2.01
728 800 8.366359 AGTTCTAGGTACTCCCGTAAATTTAA 57.634 34.615 0.00 0.00 41.75 1.52
729 801 7.615365 TGAGTTCTAGGTACTCCCGTAAATTTA 59.385 37.037 17.72 0.00 41.02 1.40
730 802 6.438425 TGAGTTCTAGGTACTCCCGTAAATTT 59.562 38.462 17.72 0.00 41.02 1.82
731 803 5.954150 TGAGTTCTAGGTACTCCCGTAAATT 59.046 40.000 17.72 0.00 41.02 1.82
732 804 5.513233 TGAGTTCTAGGTACTCCCGTAAAT 58.487 41.667 17.72 0.00 41.02 1.40
733 805 4.922206 TGAGTTCTAGGTACTCCCGTAAA 58.078 43.478 17.72 2.22 41.02 2.01
734 806 4.574674 TGAGTTCTAGGTACTCCCGTAA 57.425 45.455 17.72 2.75 41.02 3.18
735 807 4.411540 AGATGAGTTCTAGGTACTCCCGTA 59.588 45.833 17.72 5.36 41.02 4.02
736 808 3.202595 AGATGAGTTCTAGGTACTCCCGT 59.797 47.826 17.72 8.41 41.02 5.28
737 809 3.822940 AGATGAGTTCTAGGTACTCCCG 58.177 50.000 17.72 0.00 41.02 5.14
738 810 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
739 811 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
769 841 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
770 842 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
771 843 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
772 844 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
773 845 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
774 846 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
775 847 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
776 848 6.416161 GCTCTTGTTTTCAAAGTGAATGAGAC 59.584 38.462 0.00 0.00 39.47 3.36
777 849 6.095300 TGCTCTTGTTTTCAAAGTGAATGAGA 59.905 34.615 0.00 0.00 39.47 3.27
778 850 6.267817 TGCTCTTGTTTTCAAAGTGAATGAG 58.732 36.000 0.00 0.00 39.47 2.90
779 851 6.095300 TCTGCTCTTGTTTTCAAAGTGAATGA 59.905 34.615 0.00 0.00 39.47 2.57
780 852 6.267817 TCTGCTCTTGTTTTCAAAGTGAATG 58.732 36.000 0.00 0.00 39.47 2.67
781 853 6.455360 TCTGCTCTTGTTTTCAAAGTGAAT 57.545 33.333 0.00 0.00 39.47 2.57
782 854 5.895636 TCTGCTCTTGTTTTCAAAGTGAA 57.104 34.783 0.00 0.00 39.47 3.18
783 855 7.750229 ATATCTGCTCTTGTTTTCAAAGTGA 57.250 32.000 0.00 0.00 39.47 3.41
786 858 9.727627 GGATTATATCTGCTCTTGTTTTCAAAG 57.272 33.333 0.00 0.00 39.47 2.77
787 859 9.241919 TGGATTATATCTGCTCTTGTTTTCAAA 57.758 29.630 0.00 0.00 39.47 2.69
788 860 8.677300 GTGGATTATATCTGCTCTTGTTTTCAA 58.323 33.333 0.00 0.00 38.21 2.69
789 861 7.011389 CGTGGATTATATCTGCTCTTGTTTTCA 59.989 37.037 0.00 0.00 0.00 2.69
790 862 7.011482 ACGTGGATTATATCTGCTCTTGTTTTC 59.989 37.037 0.00 0.00 0.00 2.29
791 863 6.823689 ACGTGGATTATATCTGCTCTTGTTTT 59.176 34.615 0.00 0.00 0.00 2.43
792 864 6.349300 ACGTGGATTATATCTGCTCTTGTTT 58.651 36.000 0.00 0.00 0.00 2.83
793 865 5.918608 ACGTGGATTATATCTGCTCTTGTT 58.081 37.500 0.00 0.00 0.00 2.83
794 866 5.069119 TGACGTGGATTATATCTGCTCTTGT 59.931 40.000 0.00 0.00 0.00 3.16
795 867 5.532557 TGACGTGGATTATATCTGCTCTTG 58.467 41.667 0.00 0.00 0.00 3.02
796 868 5.777802 CTGACGTGGATTATATCTGCTCTT 58.222 41.667 0.00 0.00 0.00 2.85
797 869 4.321601 GCTGACGTGGATTATATCTGCTCT 60.322 45.833 0.00 0.00 33.10 4.09
798 870 3.923461 GCTGACGTGGATTATATCTGCTC 59.077 47.826 0.00 0.00 33.10 4.26
799 871 3.321968 TGCTGACGTGGATTATATCTGCT 59.678 43.478 0.00 0.00 35.83 4.24
800 872 3.430218 GTGCTGACGTGGATTATATCTGC 59.570 47.826 0.00 0.00 35.51 4.26
801 873 4.445718 GTGTGCTGACGTGGATTATATCTG 59.554 45.833 0.00 0.00 0.00 2.90
802 874 4.099419 TGTGTGCTGACGTGGATTATATCT 59.901 41.667 0.00 0.00 0.00 1.98
803 875 4.209288 GTGTGTGCTGACGTGGATTATATC 59.791 45.833 0.00 0.00 0.00 1.63
804 876 4.119862 GTGTGTGCTGACGTGGATTATAT 58.880 43.478 0.00 0.00 0.00 0.86
805 877 3.517602 GTGTGTGCTGACGTGGATTATA 58.482 45.455 0.00 0.00 0.00 0.98
806 878 2.346803 GTGTGTGCTGACGTGGATTAT 58.653 47.619 0.00 0.00 0.00 1.28
807 879 1.790755 GTGTGTGCTGACGTGGATTA 58.209 50.000 0.00 0.00 0.00 1.75
808 880 1.221466 CGTGTGTGCTGACGTGGATT 61.221 55.000 0.00 0.00 0.00 3.01
809 881 1.664649 CGTGTGTGCTGACGTGGAT 60.665 57.895 0.00 0.00 0.00 3.41
810 882 2.279186 CGTGTGTGCTGACGTGGA 60.279 61.111 0.00 0.00 0.00 4.02
811 883 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
812 884 2.104770 AATGCGTGTGTGCTGACGTG 62.105 55.000 0.00 0.00 37.89 4.49
813 885 1.436195 AAATGCGTGTGTGCTGACGT 61.436 50.000 0.00 0.00 37.89 4.34
814 886 0.316937 AAAATGCGTGTGTGCTGACG 60.317 50.000 0.00 0.00 38.63 4.35
815 887 2.679355 TAAAATGCGTGTGTGCTGAC 57.321 45.000 0.00 0.00 35.36 3.51
816 888 3.181511 GCTATAAAATGCGTGTGTGCTGA 60.182 43.478 0.00 0.00 35.36 4.26
817 889 3.100817 GCTATAAAATGCGTGTGTGCTG 58.899 45.455 0.00 0.00 35.36 4.41
818 890 2.746904 TGCTATAAAATGCGTGTGTGCT 59.253 40.909 0.00 0.00 35.36 4.40
819 891 3.129852 TGCTATAAAATGCGTGTGTGC 57.870 42.857 0.00 0.00 0.00 4.57
820 892 4.730042 GTGATGCTATAAAATGCGTGTGTG 59.270 41.667 0.00 0.00 0.00 3.82
821 893 4.394610 TGTGATGCTATAAAATGCGTGTGT 59.605 37.500 0.00 0.00 0.00 3.72
822 894 4.907579 TGTGATGCTATAAAATGCGTGTG 58.092 39.130 0.00 0.00 0.00 3.82
823 895 5.277974 GGATGTGATGCTATAAAATGCGTGT 60.278 40.000 0.00 0.00 0.00 4.49
824 896 5.149273 GGATGTGATGCTATAAAATGCGTG 58.851 41.667 0.00 0.00 0.00 5.34
825 897 4.821260 TGGATGTGATGCTATAAAATGCGT 59.179 37.500 0.00 0.00 0.00 5.24
826 898 5.361135 TGGATGTGATGCTATAAAATGCG 57.639 39.130 0.00 0.00 0.00 4.73
827 899 6.588756 CCATTGGATGTGATGCTATAAAATGC 59.411 38.462 0.00 0.00 0.00 3.56
828 900 6.588756 GCCATTGGATGTGATGCTATAAAATG 59.411 38.462 6.95 0.00 0.00 2.32
829 901 6.495872 AGCCATTGGATGTGATGCTATAAAAT 59.504 34.615 6.95 0.00 0.00 1.82
830 902 5.834742 AGCCATTGGATGTGATGCTATAAAA 59.165 36.000 6.95 0.00 0.00 1.52
831 903 5.387788 AGCCATTGGATGTGATGCTATAAA 58.612 37.500 6.95 0.00 0.00 1.40
832 904 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
833 905 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
834 906 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
835 907 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
836 908 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
837 909 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
838 910 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
839 911 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
840 912 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
841 913 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
842 914 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
843 915 6.713762 TTCACCTTTTATAGCCATTGGATG 57.286 37.500 6.95 0.00 0.00 3.51
844 916 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
845 917 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
846 918 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
847 919 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
848 920 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
849 921 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
850 922 5.437060 GGTCTCATTCACCTTTTATAGCCA 58.563 41.667 0.00 0.00 0.00 4.75
851 923 4.511826 CGGTCTCATTCACCTTTTATAGCC 59.488 45.833 0.00 0.00 0.00 3.93
852 924 5.357257 TCGGTCTCATTCACCTTTTATAGC 58.643 41.667 0.00 0.00 0.00 2.97
853 925 8.438676 AATTCGGTCTCATTCACCTTTTATAG 57.561 34.615 0.00 0.00 0.00 1.31
855 927 8.980481 ATAATTCGGTCTCATTCACCTTTTAT 57.020 30.769 0.00 0.00 0.00 1.40
857 929 8.980481 ATATAATTCGGTCTCATTCACCTTTT 57.020 30.769 0.00 0.00 0.00 2.27
858 930 8.432805 AGATATAATTCGGTCTCATTCACCTTT 58.567 33.333 0.00 0.00 0.00 3.11
859 931 7.967908 AGATATAATTCGGTCTCATTCACCTT 58.032 34.615 0.00 0.00 0.00 3.50
860 932 7.233553 TGAGATATAATTCGGTCTCATTCACCT 59.766 37.037 10.72 0.00 41.40 4.00
861 933 7.378966 TGAGATATAATTCGGTCTCATTCACC 58.621 38.462 10.72 0.00 41.40 4.02
901 973 9.793252 CATGCATAGTAAATTTAGAGTTTTGCT 57.207 29.630 0.00 0.00 33.32 3.91
902 974 8.534778 GCATGCATAGTAAATTTAGAGTTTTGC 58.465 33.333 14.21 3.89 0.00 3.68
903 975 9.571810 TGCATGCATAGTAAATTTAGAGTTTTG 57.428 29.630 18.46 0.00 0.00 2.44
905 977 9.740239 CATGCATGCATAGTAAATTTAGAGTTT 57.260 29.630 31.73 2.14 34.91 2.66
906 978 8.906867 ACATGCATGCATAGTAAATTTAGAGTT 58.093 29.630 31.73 2.53 34.91 3.01
907 979 8.455903 ACATGCATGCATAGTAAATTTAGAGT 57.544 30.769 31.73 17.57 34.91 3.24
908 980 9.390795 GAACATGCATGCATAGTAAATTTAGAG 57.609 33.333 31.73 16.94 34.91 2.43
909 981 9.123902 AGAACATGCATGCATAGTAAATTTAGA 57.876 29.630 31.73 0.00 34.91 2.10
910 982 9.740239 AAGAACATGCATGCATAGTAAATTTAG 57.260 29.630 31.73 17.62 34.91 1.85
917 989 5.922053 AGAGAAGAACATGCATGCATAGTA 58.078 37.500 31.73 4.78 34.91 1.82
943 1015 4.634012 ACCCATGTTTACTGCTACTCAA 57.366 40.909 0.00 0.00 0.00 3.02
1012 1084 3.041940 GGACTGGGTGTTCACGCG 61.042 66.667 3.53 3.53 0.00 6.01
1071 1143 1.003233 GGCGAGCTTGGACTTTCCT 60.003 57.895 2.37 0.00 37.46 3.36
1273 1345 4.899239 GACGGAGATGGCGGCCTG 62.899 72.222 21.46 5.58 0.00 4.85
1706 1778 3.692406 GGACGTCCCAGCCTTCGT 61.692 66.667 24.75 0.00 39.21 3.85
1776 1851 1.324005 CCGACTCCCAGACCTCCTTC 61.324 65.000 0.00 0.00 0.00 3.46
1853 1928 0.033405 AGCAGCTGGAGCATGGAAAT 60.033 50.000 17.12 0.00 45.16 2.17
1923 1998 1.771255 AGCAGGGATACAAGGACATCC 59.229 52.381 0.00 0.00 40.11 3.51
1924 1999 2.843701 CAGCAGGGATACAAGGACATC 58.156 52.381 0.00 0.00 39.74 3.06
1928 2003 0.543277 CAGCAGCAGGGATACAAGGA 59.457 55.000 0.00 0.00 39.74 3.36
1929 2004 1.099879 GCAGCAGCAGGGATACAAGG 61.100 60.000 0.00 0.00 41.58 3.61
1930 2005 2.401967 GCAGCAGCAGGGATACAAG 58.598 57.895 0.00 0.00 41.58 3.16
2179 2267 2.609427 TGCATGCTCCTAGCTTACAG 57.391 50.000 20.33 0.00 42.97 2.74
2232 2324 1.186917 CCAAGCCAAGCACCATGGAA 61.187 55.000 21.47 0.00 40.56 3.53
2241 2333 1.973812 GGAGTGGTCCAAGCCAAGC 60.974 63.158 0.00 0.00 43.31 4.01
2242 2334 4.404691 GGAGTGGTCCAAGCCAAG 57.595 61.111 0.00 0.00 43.31 3.61
2251 2343 3.052081 AGCACGAGTGGAGTGGTC 58.948 61.111 5.32 0.00 45.80 4.02
2253 2345 0.668706 CTGAAGCACGAGTGGAGTGG 60.669 60.000 5.32 0.00 39.80 4.00
2254 2346 0.315251 TCTGAAGCACGAGTGGAGTG 59.685 55.000 5.32 0.00 42.15 3.51
2255 2347 0.315568 GTCTGAAGCACGAGTGGAGT 59.684 55.000 5.32 0.00 0.00 3.85
2256 2348 0.730834 CGTCTGAAGCACGAGTGGAG 60.731 60.000 5.32 0.00 39.75 3.86
2257 2349 1.285950 CGTCTGAAGCACGAGTGGA 59.714 57.895 5.32 0.00 39.75 4.02
2258 2350 0.240145 TACGTCTGAAGCACGAGTGG 59.760 55.000 5.32 0.00 39.75 4.00
2259 2351 1.069159 AGTACGTCTGAAGCACGAGTG 60.069 52.381 0.00 0.00 39.75 3.51
2260 2352 1.197264 GAGTACGTCTGAAGCACGAGT 59.803 52.381 0.00 0.00 39.75 4.18
2261 2353 1.466024 GGAGTACGTCTGAAGCACGAG 60.466 57.143 0.00 0.00 39.75 4.18
2262 2354 0.520404 GGAGTACGTCTGAAGCACGA 59.480 55.000 0.00 0.00 39.75 4.35
2263 2355 0.522180 AGGAGTACGTCTGAAGCACG 59.478 55.000 0.00 0.00 43.13 5.34
2264 2356 2.030185 TGAAGGAGTACGTCTGAAGCAC 60.030 50.000 0.00 0.00 0.00 4.40
2265 2357 2.030185 GTGAAGGAGTACGTCTGAAGCA 60.030 50.000 0.00 0.00 0.00 3.91
2266 2358 2.030185 TGTGAAGGAGTACGTCTGAAGC 60.030 50.000 0.00 0.00 0.00 3.86
2267 2359 3.253677 ACTGTGAAGGAGTACGTCTGAAG 59.746 47.826 0.00 0.00 0.00 3.02
2268 2360 3.220110 ACTGTGAAGGAGTACGTCTGAA 58.780 45.455 0.00 0.00 0.00 3.02
2269 2361 2.812591 GACTGTGAAGGAGTACGTCTGA 59.187 50.000 0.00 0.00 0.00 3.27
2270 2362 2.412977 CGACTGTGAAGGAGTACGTCTG 60.413 54.545 0.00 0.00 0.00 3.51
2271 2363 1.805345 CGACTGTGAAGGAGTACGTCT 59.195 52.381 0.00 0.00 0.00 4.18
2272 2364 1.135746 CCGACTGTGAAGGAGTACGTC 60.136 57.143 0.00 0.00 0.00 4.34
2273 2365 0.879765 CCGACTGTGAAGGAGTACGT 59.120 55.000 0.00 0.00 0.00 3.57
2283 2375 0.943835 CATGCAACGACCGACTGTGA 60.944 55.000 0.00 0.00 0.00 3.58
2292 2384 1.074319 CCATGCTTGCATGCAACGAC 61.074 55.000 28.80 20.14 46.61 4.34
2293 2385 1.213275 CCATGCTTGCATGCAACGA 59.787 52.632 28.80 17.84 46.61 3.85
2294 2386 1.807981 CCCATGCTTGCATGCAACG 60.808 57.895 28.80 23.20 46.61 4.10
2407 2499 8.559536 GTCTTTAAATCGAATCATCATAGCCAA 58.440 33.333 0.00 0.00 0.00 4.52
2469 2567 9.522804 GTGGTTAGAAAAGTAGATGTGAGATAG 57.477 37.037 0.00 0.00 0.00 2.08
2470 2568 9.031537 TGTGGTTAGAAAAGTAGATGTGAGATA 57.968 33.333 0.00 0.00 0.00 1.98
2471 2569 7.907389 TGTGGTTAGAAAAGTAGATGTGAGAT 58.093 34.615 0.00 0.00 0.00 2.75
2472 2570 7.297936 TGTGGTTAGAAAAGTAGATGTGAGA 57.702 36.000 0.00 0.00 0.00 3.27
2473 2571 7.819415 TCATGTGGTTAGAAAAGTAGATGTGAG 59.181 37.037 0.00 0.00 0.00 3.51
2474 2572 7.676004 TCATGTGGTTAGAAAAGTAGATGTGA 58.324 34.615 0.00 0.00 0.00 3.58
2475 2573 7.905604 TCATGTGGTTAGAAAAGTAGATGTG 57.094 36.000 0.00 0.00 0.00 3.21
2476 2574 9.520515 AAATCATGTGGTTAGAAAAGTAGATGT 57.479 29.630 0.00 0.00 0.00 3.06
2482 2580 8.918202 TGTCTAAATCATGTGGTTAGAAAAGT 57.082 30.769 13.40 0.00 36.03 2.66
2483 2581 9.994432 GATGTCTAAATCATGTGGTTAGAAAAG 57.006 33.333 13.40 0.00 36.03 2.27
2484 2582 9.513906 TGATGTCTAAATCATGTGGTTAGAAAA 57.486 29.630 13.40 8.36 36.03 2.29
2485 2583 9.513906 TTGATGTCTAAATCATGTGGTTAGAAA 57.486 29.630 13.40 10.52 36.03 2.52
2486 2584 9.166173 CTTGATGTCTAAATCATGTGGTTAGAA 57.834 33.333 13.40 7.78 36.03 2.10
2487 2585 8.539544 TCTTGATGTCTAAATCATGTGGTTAGA 58.460 33.333 9.80 9.80 36.48 2.10
2488 2586 8.722480 TCTTGATGTCTAAATCATGTGGTTAG 57.278 34.615 0.00 0.00 36.48 2.34
2489 2587 9.685276 AATCTTGATGTCTAAATCATGTGGTTA 57.315 29.630 0.00 0.00 36.48 2.85
2490 2588 8.585471 AATCTTGATGTCTAAATCATGTGGTT 57.415 30.769 0.00 0.00 36.48 3.67
2491 2589 9.334947 CTAATCTTGATGTCTAAATCATGTGGT 57.665 33.333 0.00 0.00 36.48 4.16
2492 2590 9.334947 ACTAATCTTGATGTCTAAATCATGTGG 57.665 33.333 0.00 0.00 36.48 4.17
2536 2634 8.556194 GCGTACAGGAAATGTATCAATCAATTA 58.444 33.333 0.00 0.00 45.94 1.40
2537 2635 7.417612 GCGTACAGGAAATGTATCAATCAATT 58.582 34.615 0.00 0.00 45.94 2.32
2538 2636 6.292865 CGCGTACAGGAAATGTATCAATCAAT 60.293 38.462 0.00 0.00 45.94 2.57
2539 2637 5.006261 CGCGTACAGGAAATGTATCAATCAA 59.994 40.000 0.00 0.00 45.94 2.57
2540 2638 4.506288 CGCGTACAGGAAATGTATCAATCA 59.494 41.667 0.00 0.00 45.94 2.57
2541 2639 4.506654 ACGCGTACAGGAAATGTATCAATC 59.493 41.667 11.67 0.00 45.94 2.67
2542 2640 4.439057 ACGCGTACAGGAAATGTATCAAT 58.561 39.130 11.67 0.00 45.94 2.57
2543 2641 3.852286 ACGCGTACAGGAAATGTATCAA 58.148 40.909 11.67 0.00 45.94 2.57
2544 2642 3.513680 ACGCGTACAGGAAATGTATCA 57.486 42.857 11.67 0.00 45.94 2.15
2545 2643 5.039333 AGTAACGCGTACAGGAAATGTATC 58.961 41.667 14.46 0.00 45.94 2.24
2546 2644 5.002464 AGTAACGCGTACAGGAAATGTAT 57.998 39.130 14.46 0.00 45.94 2.29
2547 2645 4.414852 GAGTAACGCGTACAGGAAATGTA 58.585 43.478 14.46 0.00 43.66 2.29
2548 2646 3.248266 GAGTAACGCGTACAGGAAATGT 58.752 45.455 14.46 0.00 46.45 2.71
2549 2647 2.278094 CGAGTAACGCGTACAGGAAATG 59.722 50.000 14.46 0.00 34.88 2.32
2550 2648 2.523015 CGAGTAACGCGTACAGGAAAT 58.477 47.619 14.46 0.00 34.88 2.17
2551 2649 1.967762 CGAGTAACGCGTACAGGAAA 58.032 50.000 14.46 0.00 34.88 3.13
2552 2650 3.681705 CGAGTAACGCGTACAGGAA 57.318 52.632 14.46 0.00 34.88 3.36
2577 2675 2.813908 CTTACTGGCACGACGGGC 60.814 66.667 15.25 15.25 0.00 6.13
2578 2676 2.813908 GCTTACTGGCACGACGGG 60.814 66.667 0.00 0.00 0.00 5.28
2579 2677 2.813908 GGCTTACTGGCACGACGG 60.814 66.667 0.00 0.00 41.37 4.79
2580 2678 3.179265 CGGCTTACTGGCACGACG 61.179 66.667 0.00 0.00 41.89 5.12
2581 2679 3.488090 GCGGCTTACTGGCACGAC 61.488 66.667 0.00 0.00 41.89 4.34
2582 2680 3.691342 AGCGGCTTACTGGCACGA 61.691 61.111 0.00 0.00 41.89 4.35
2583 2681 2.829043 TACAGCGGCTTACTGGCACG 62.829 60.000 0.00 0.00 41.89 5.34
2584 2682 1.079405 TACAGCGGCTTACTGGCAC 60.079 57.895 0.00 0.00 41.89 5.01
2585 2683 1.218047 CTACAGCGGCTTACTGGCA 59.782 57.895 0.00 0.00 41.89 4.92
2586 2684 0.105039 ATCTACAGCGGCTTACTGGC 59.895 55.000 0.00 0.00 39.55 4.85
2587 2685 1.269831 GGATCTACAGCGGCTTACTGG 60.270 57.143 0.00 0.00 39.55 4.00
2588 2686 1.409064 TGGATCTACAGCGGCTTACTG 59.591 52.381 0.00 0.00 41.08 2.74
2589 2687 1.776662 TGGATCTACAGCGGCTTACT 58.223 50.000 0.00 0.00 0.00 2.24
2590 2688 2.821991 ATGGATCTACAGCGGCTTAC 57.178 50.000 0.00 0.00 0.00 2.34
2591 2689 3.133901 TCAAATGGATCTACAGCGGCTTA 59.866 43.478 0.00 0.00 0.00 3.09
2592 2690 2.092968 TCAAATGGATCTACAGCGGCTT 60.093 45.455 0.00 0.00 0.00 4.35
2593 2691 1.486310 TCAAATGGATCTACAGCGGCT 59.514 47.619 0.00 0.00 0.00 5.52
2594 2692 1.953559 TCAAATGGATCTACAGCGGC 58.046 50.000 0.00 0.00 0.00 6.53
2595 2693 5.163622 ACAAATTCAAATGGATCTACAGCGG 60.164 40.000 0.00 0.00 0.00 5.52
2596 2694 5.883661 ACAAATTCAAATGGATCTACAGCG 58.116 37.500 0.00 0.00 0.00 5.18
2597 2695 6.753744 GGAACAAATTCAAATGGATCTACAGC 59.246 38.462 0.00 0.00 36.46 4.40
2598 2696 8.059798 AGGAACAAATTCAAATGGATCTACAG 57.940 34.615 0.00 0.00 36.46 2.74
2599 2697 7.148255 CGAGGAACAAATTCAAATGGATCTACA 60.148 37.037 0.00 0.00 36.46 2.74
2600 2698 7.148239 ACGAGGAACAAATTCAAATGGATCTAC 60.148 37.037 0.00 0.00 36.46 2.59
2601 2699 6.884295 ACGAGGAACAAATTCAAATGGATCTA 59.116 34.615 0.00 0.00 36.46 1.98
2602 2700 5.711976 ACGAGGAACAAATTCAAATGGATCT 59.288 36.000 0.00 0.00 36.46 2.75
2603 2701 5.801947 CACGAGGAACAAATTCAAATGGATC 59.198 40.000 0.00 0.00 36.46 3.36
2604 2702 5.243730 ACACGAGGAACAAATTCAAATGGAT 59.756 36.000 0.00 0.00 36.46 3.41
2605 2703 4.582656 ACACGAGGAACAAATTCAAATGGA 59.417 37.500 0.00 0.00 36.46 3.41
2606 2704 4.681025 CACACGAGGAACAAATTCAAATGG 59.319 41.667 0.00 0.00 36.46 3.16
2607 2705 5.173673 CACACACGAGGAACAAATTCAAATG 59.826 40.000 0.00 0.00 36.46 2.32
2608 2706 5.280945 CACACACGAGGAACAAATTCAAAT 58.719 37.500 0.00 0.00 36.46 2.32
2609 2707 4.667262 CACACACGAGGAACAAATTCAAA 58.333 39.130 0.00 0.00 36.46 2.69
2610 2708 3.488384 GCACACACGAGGAACAAATTCAA 60.488 43.478 0.00 0.00 36.46 2.69
2611 2709 2.032799 GCACACACGAGGAACAAATTCA 59.967 45.455 0.00 0.00 36.46 2.57
2612 2710 2.604614 GGCACACACGAGGAACAAATTC 60.605 50.000 0.00 0.00 0.00 2.17
2613 2711 1.336755 GGCACACACGAGGAACAAATT 59.663 47.619 0.00 0.00 0.00 1.82
2614 2712 0.951558 GGCACACACGAGGAACAAAT 59.048 50.000 0.00 0.00 0.00 2.32
2615 2713 0.107410 AGGCACACACGAGGAACAAA 60.107 50.000 0.00 0.00 0.00 2.83
2616 2714 0.531974 GAGGCACACACGAGGAACAA 60.532 55.000 0.00 0.00 0.00 2.83
2617 2715 1.069090 GAGGCACACACGAGGAACA 59.931 57.895 0.00 0.00 0.00 3.18
2618 2716 2.022129 CGAGGCACACACGAGGAAC 61.022 63.158 0.00 0.00 0.00 3.62
2619 2717 2.023414 AACGAGGCACACACGAGGAA 62.023 55.000 0.00 0.00 0.00 3.36
2620 2718 2.495409 AACGAGGCACACACGAGGA 61.495 57.895 0.00 0.00 0.00 3.71
2621 2719 2.029073 AACGAGGCACACACGAGG 59.971 61.111 0.00 0.00 0.00 4.63
2622 2720 2.310233 CCAACGAGGCACACACGAG 61.310 63.158 0.00 0.00 0.00 4.18
2623 2721 2.279851 CCAACGAGGCACACACGA 60.280 61.111 0.00 0.00 0.00 4.35
2632 2730 2.908073 GCCACAACAGCCAACGAGG 61.908 63.158 0.00 0.00 41.84 4.63
2633 2731 0.602638 TAGCCACAACAGCCAACGAG 60.603 55.000 0.00 0.00 0.00 4.18
2634 2732 0.882927 GTAGCCACAACAGCCAACGA 60.883 55.000 0.00 0.00 0.00 3.85
2635 2733 1.163420 TGTAGCCACAACAGCCAACG 61.163 55.000 0.00 0.00 0.00 4.10
2636 2734 1.001378 CTTGTAGCCACAACAGCCAAC 60.001 52.381 0.00 0.00 39.75 3.77
2637 2735 1.317613 CTTGTAGCCACAACAGCCAA 58.682 50.000 0.00 0.00 39.75 4.52
2638 2736 0.182537 ACTTGTAGCCACAACAGCCA 59.817 50.000 0.00 0.00 39.75 4.75
2639 2737 0.593128 CACTTGTAGCCACAACAGCC 59.407 55.000 0.00 0.00 39.75 4.85
2640 2738 1.593196 TCACTTGTAGCCACAACAGC 58.407 50.000 0.00 0.00 39.75 4.40
2641 2739 2.942376 TGTTCACTTGTAGCCACAACAG 59.058 45.455 0.00 0.00 39.75 3.16
2642 2740 2.992593 TGTTCACTTGTAGCCACAACA 58.007 42.857 0.00 0.00 39.75 3.33
2643 2741 4.568152 AATGTTCACTTGTAGCCACAAC 57.432 40.909 0.00 0.00 39.75 3.32
2644 2742 5.590530 AAAATGTTCACTTGTAGCCACAA 57.409 34.783 0.00 0.00 42.39 3.33
2645 2743 5.126222 TGAAAAATGTTCACTTGTAGCCACA 59.874 36.000 0.00 0.00 0.00 4.17
2646 2744 5.587289 TGAAAAATGTTCACTTGTAGCCAC 58.413 37.500 0.00 0.00 0.00 5.01
2647 2745 5.843673 TGAAAAATGTTCACTTGTAGCCA 57.156 34.783 0.00 0.00 0.00 4.75
2648 2746 7.713764 AATTGAAAAATGTTCACTTGTAGCC 57.286 32.000 0.00 0.00 0.00 3.93
2649 2747 9.636965 GAAAATTGAAAAATGTTCACTTGTAGC 57.363 29.630 0.00 0.00 0.00 3.58
2652 2750 9.218440 ACAGAAAATTGAAAAATGTTCACTTGT 57.782 25.926 4.61 0.00 30.51 3.16
2803 2901 9.743057 ACAATCAATTAACAACGATGAAAAGAA 57.257 25.926 0.00 0.00 0.00 2.52
2804 2902 9.393249 GACAATCAATTAACAACGATGAAAAGA 57.607 29.630 0.00 0.00 0.00 2.52
2805 2903 8.638565 GGACAATCAATTAACAACGATGAAAAG 58.361 33.333 0.00 0.00 0.00 2.27
2806 2904 8.138074 TGGACAATCAATTAACAACGATGAAAA 58.862 29.630 0.00 0.00 0.00 2.29
2807 2905 7.593273 GTGGACAATCAATTAACAACGATGAAA 59.407 33.333 0.00 0.00 0.00 2.69
2808 2906 7.081349 GTGGACAATCAATTAACAACGATGAA 58.919 34.615 0.00 0.00 0.00 2.57
2809 2907 6.348950 GGTGGACAATCAATTAACAACGATGA 60.349 38.462 0.00 0.00 0.00 2.92
2810 2908 5.799936 GGTGGACAATCAATTAACAACGATG 59.200 40.000 0.00 0.00 0.00 3.84
2811 2909 5.475220 TGGTGGACAATCAATTAACAACGAT 59.525 36.000 0.00 0.00 0.00 3.73
2812 2910 4.822350 TGGTGGACAATCAATTAACAACGA 59.178 37.500 0.00 0.00 0.00 3.85
2813 2911 4.915085 GTGGTGGACAATCAATTAACAACG 59.085 41.667 0.00 0.00 0.00 4.10
2814 2912 5.221342 TGGTGGTGGACAATCAATTAACAAC 60.221 40.000 0.00 0.00 0.00 3.32
2815 2913 4.895889 TGGTGGTGGACAATCAATTAACAA 59.104 37.500 0.00 0.00 0.00 2.83
2816 2914 4.474394 TGGTGGTGGACAATCAATTAACA 58.526 39.130 0.00 0.00 0.00 2.41
2817 2915 5.461032 TTGGTGGTGGACAATCAATTAAC 57.539 39.130 0.00 0.00 0.00 2.01
2818 2916 5.363868 TGTTTGGTGGTGGACAATCAATTAA 59.636 36.000 0.00 0.00 0.00 1.40
2819 2917 4.895889 TGTTTGGTGGTGGACAATCAATTA 59.104 37.500 0.00 0.00 0.00 1.40
2820 2918 3.708631 TGTTTGGTGGTGGACAATCAATT 59.291 39.130 0.00 0.00 0.00 2.32
2821 2919 3.303938 TGTTTGGTGGTGGACAATCAAT 58.696 40.909 0.00 0.00 0.00 2.57
2822 2920 2.739943 TGTTTGGTGGTGGACAATCAA 58.260 42.857 0.00 0.00 0.00 2.57
2823 2921 2.443958 TGTTTGGTGGTGGACAATCA 57.556 45.000 0.00 0.00 0.00 2.57
2824 2922 2.029110 CCATGTTTGGTGGTGGACAATC 60.029 50.000 0.00 0.00 38.30 2.67
2825 2923 1.969923 CCATGTTTGGTGGTGGACAAT 59.030 47.619 0.00 0.00 38.30 2.71
2826 2924 1.407936 CCATGTTTGGTGGTGGACAA 58.592 50.000 0.00 0.00 38.30 3.18
2827 2925 0.468958 CCCATGTTTGGTGGTGGACA 60.469 55.000 0.00 0.00 41.91 4.02
2828 2926 0.469144 ACCCATGTTTGGTGGTGGAC 60.469 55.000 0.00 0.00 41.91 4.02
2829 2927 0.263172 AACCCATGTTTGGTGGTGGA 59.737 50.000 0.00 0.00 41.91 4.02
2830 2928 1.127343 AAACCCATGTTTGGTGGTGG 58.873 50.000 0.00 0.00 42.97 4.61
2831 2929 2.998316 AAAACCCATGTTTGGTGGTG 57.002 45.000 0.00 0.00 43.80 4.17
2850 2948 6.323739 AGGGTAGAGTTGCAATTTGAGAAAAA 59.676 34.615 0.59 0.00 0.00 1.94
2851 2949 5.833131 AGGGTAGAGTTGCAATTTGAGAAAA 59.167 36.000 0.59 0.00 0.00 2.29
2852 2950 5.385198 AGGGTAGAGTTGCAATTTGAGAAA 58.615 37.500 0.59 0.00 0.00 2.52
2853 2951 4.985538 AGGGTAGAGTTGCAATTTGAGAA 58.014 39.130 0.59 0.00 0.00 2.87
2854 2952 4.041567 TGAGGGTAGAGTTGCAATTTGAGA 59.958 41.667 0.59 0.00 0.00 3.27
2855 2953 4.326826 TGAGGGTAGAGTTGCAATTTGAG 58.673 43.478 0.59 0.00 0.00 3.02
2856 2954 4.365514 TGAGGGTAGAGTTGCAATTTGA 57.634 40.909 0.59 0.00 0.00 2.69
2857 2955 4.520492 AGTTGAGGGTAGAGTTGCAATTTG 59.480 41.667 0.59 0.00 0.00 2.32
2858 2956 4.729868 AGTTGAGGGTAGAGTTGCAATTT 58.270 39.130 0.59 0.00 0.00 1.82
2859 2957 4.373156 AGTTGAGGGTAGAGTTGCAATT 57.627 40.909 0.59 0.00 0.00 2.32
2860 2958 4.074970 CAAGTTGAGGGTAGAGTTGCAAT 58.925 43.478 0.59 0.00 0.00 3.56
2861 2959 3.476552 CAAGTTGAGGGTAGAGTTGCAA 58.523 45.455 0.00 0.00 0.00 4.08
2862 2960 2.810400 GCAAGTTGAGGGTAGAGTTGCA 60.810 50.000 7.16 0.00 44.85 4.08
2863 2961 1.807142 GCAAGTTGAGGGTAGAGTTGC 59.193 52.381 7.16 0.00 40.99 4.17
2864 2962 3.126001 TGCAAGTTGAGGGTAGAGTTG 57.874 47.619 7.16 0.00 0.00 3.16
2865 2963 3.136626 AGTTGCAAGTTGAGGGTAGAGTT 59.863 43.478 7.16 0.00 0.00 3.01
2866 2964 2.706190 AGTTGCAAGTTGAGGGTAGAGT 59.294 45.455 7.16 0.00 0.00 3.24
2867 2965 3.330267 GAGTTGCAAGTTGAGGGTAGAG 58.670 50.000 8.48 0.00 0.00 2.43
2868 2966 2.288825 CGAGTTGCAAGTTGAGGGTAGA 60.289 50.000 15.45 0.00 0.00 2.59
2869 2967 2.069273 CGAGTTGCAAGTTGAGGGTAG 58.931 52.381 15.45 0.00 0.00 3.18
2870 2968 1.270625 CCGAGTTGCAAGTTGAGGGTA 60.271 52.381 21.17 0.00 0.00 3.69
2871 2969 0.535102 CCGAGTTGCAAGTTGAGGGT 60.535 55.000 21.17 0.00 0.00 4.34
2872 2970 1.237285 CCCGAGTTGCAAGTTGAGGG 61.237 60.000 21.17 21.25 0.00 4.30
2873 2971 1.856265 GCCCGAGTTGCAAGTTGAGG 61.856 60.000 21.17 19.40 0.00 3.86
2874 2972 1.576421 GCCCGAGTTGCAAGTTGAG 59.424 57.895 21.17 10.61 0.00 3.02
2875 2973 1.896660 GGCCCGAGTTGCAAGTTGA 60.897 57.895 21.17 0.00 0.00 3.18
2876 2974 2.644992 GGCCCGAGTTGCAAGTTG 59.355 61.111 13.83 13.83 0.00 3.16
2877 2975 2.597510 GGGCCCGAGTTGCAAGTT 60.598 61.111 5.69 0.00 0.00 2.66
2879 2977 4.697756 TCGGGCCCGAGTTGCAAG 62.698 66.667 42.66 12.44 44.01 4.01
2894 2992 2.786495 ATAGCTCCGCCAGTGGTCG 61.786 63.158 11.74 14.40 0.00 4.79
2895 2993 1.227380 CATAGCTCCGCCAGTGGTC 60.227 63.158 11.74 2.09 0.00 4.02
2896 2994 1.990060 ACATAGCTCCGCCAGTGGT 60.990 57.895 11.74 0.00 0.00 4.16
2897 2995 1.522355 CACATAGCTCCGCCAGTGG 60.522 63.158 4.20 4.20 0.00 4.00
2898 2996 0.459899 TACACATAGCTCCGCCAGTG 59.540 55.000 0.00 0.00 33.52 3.66
2899 2997 1.069204 CATACACATAGCTCCGCCAGT 59.931 52.381 0.00 0.00 0.00 4.00
2900 2998 1.606480 CCATACACATAGCTCCGCCAG 60.606 57.143 0.00 0.00 0.00 4.85
2901 2999 0.392706 CCATACACATAGCTCCGCCA 59.607 55.000 0.00 0.00 0.00 5.69
2902 3000 0.951040 GCCATACACATAGCTCCGCC 60.951 60.000 0.00 0.00 0.00 6.13
2903 3001 0.034059 AGCCATACACATAGCTCCGC 59.966 55.000 0.00 0.00 0.00 5.54
2904 3002 1.606480 CCAGCCATACACATAGCTCCG 60.606 57.143 0.00 0.00 31.93 4.63
2905 3003 1.271054 CCCAGCCATACACATAGCTCC 60.271 57.143 0.00 0.00 31.93 4.70
2906 3004 1.271054 CCCCAGCCATACACATAGCTC 60.271 57.143 0.00 0.00 31.93 4.09
2907 3005 0.767375 CCCCAGCCATACACATAGCT 59.233 55.000 0.00 0.00 35.52 3.32
2908 3006 0.250901 CCCCCAGCCATACACATAGC 60.251 60.000 0.00 0.00 0.00 2.97
2936 3034 0.767998 GAAGATCCTAGGCTTGGGGG 59.232 60.000 15.05 2.47 0.00 5.40
2937 3035 1.419387 CAGAAGATCCTAGGCTTGGGG 59.581 57.143 15.05 4.94 0.00 4.96
2938 3036 2.122768 ACAGAAGATCCTAGGCTTGGG 58.877 52.381 15.05 7.46 0.00 4.12
2939 3037 2.768527 TCACAGAAGATCCTAGGCTTGG 59.231 50.000 8.84 8.84 0.00 3.61
2940 3038 4.161189 TCTTCACAGAAGATCCTAGGCTTG 59.839 45.833 2.96 0.00 0.00 4.01
2941 3039 4.357325 TCTTCACAGAAGATCCTAGGCTT 58.643 43.478 2.96 2.16 0.00 4.35
2942 3040 3.987745 TCTTCACAGAAGATCCTAGGCT 58.012 45.455 2.96 0.00 0.00 4.58
2943 3041 4.953940 ATCTTCACAGAAGATCCTAGGC 57.046 45.455 14.69 0.00 31.78 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.