Multiple sequence alignment - TraesCS1B01G064600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G064600 chr1B 100.000 2924 0 0 1 2924 49015574 49018497 0.000000e+00 5400.0
1 TraesCS1B01G064600 chr1B 94.396 1499 43 12 539 1997 49429416 49430913 0.000000e+00 2265.0
2 TraesCS1B01G064600 chr1B 99.357 311 2 0 2062 2372 49023576 49023886 5.470000e-157 564.0
3 TraesCS1B01G064600 chr1B 92.130 216 13 3 5 218 49428807 49429020 4.740000e-78 302.0
4 TraesCS1B01G064600 chr1B 100.000 53 0 0 2015 2067 49446515 49446567 6.670000e-17 99.0
5 TraesCS1B01G064600 chr2D 91.998 1612 48 29 520 2067 22767115 22768709 0.000000e+00 2187.0
6 TraesCS1B01G064600 chr2D 92.739 303 19 3 213 515 618294469 618294768 4.480000e-118 435.0
7 TraesCS1B01G064600 chr2A 94.617 1319 36 16 776 2067 24363728 24365038 0.000000e+00 2010.0
8 TraesCS1B01G064600 chr2A 93.898 295 18 0 221 515 743327489 743327783 2.070000e-121 446.0
9 TraesCS1B01G064600 chr2A 90.155 193 10 5 29 218 24363294 24363480 2.910000e-60 243.0
10 TraesCS1B01G064600 chr2A 94.853 136 7 0 519 654 24363479 24363614 2.280000e-51 213.0
11 TraesCS1B01G064600 chr5B 87.774 638 43 13 2292 2924 660721609 660721002 0.000000e+00 713.0
12 TraesCS1B01G064600 chr5B 75.214 585 116 22 1064 1637 504775438 504776004 1.740000e-62 250.0
13 TraesCS1B01G064600 chr7A 89.024 492 33 11 2275 2759 613760955 613760478 9.030000e-165 590.0
14 TraesCS1B01G064600 chr7A 89.552 469 30 10 2297 2759 200207460 200207005 7.030000e-161 577.0
15 TraesCS1B01G064600 chr7A 90.476 84 7 1 2841 2924 613760446 613760364 3.080000e-20 110.0
16 TraesCS1B01G064600 chr7A 91.228 57 4 1 2841 2897 200206973 200206918 3.120000e-10 76.8
17 TraesCS1B01G064600 chr7B 97.476 317 7 1 2064 2380 159866884 159866569 9.220000e-150 540.0
18 TraesCS1B01G064600 chr7B 93.559 295 19 0 221 515 728122408 728122702 9.620000e-120 440.0
19 TraesCS1B01G064600 chr7B 92.453 265 16 2 2229 2493 159872913 159872653 2.750000e-100 375.0
20 TraesCS1B01G064600 chr6B 93.667 300 17 2 217 515 675395928 675396226 5.750000e-122 448.0
21 TraesCS1B01G064600 chr3B 93.898 295 18 0 221 515 662525565 662525859 2.070000e-121 446.0
22 TraesCS1B01G064600 chr3B 92.114 317 19 5 199 515 191186868 191186558 2.670000e-120 442.0
23 TraesCS1B01G064600 chr3B 91.304 322 25 2 195 515 449806520 449806839 1.240000e-118 436.0
24 TraesCS1B01G064600 chr6A 93.898 295 16 1 221 515 36496125 36495833 7.440000e-121 444.0
25 TraesCS1B01G064600 chr2B 93.289 298 19 1 218 515 111361970 111361674 3.460000e-119 438.0
26 TraesCS1B01G064600 chr2B 86.818 220 18 8 2275 2488 789511256 789511470 4.870000e-58 235.0
27 TraesCS1B01G064600 chr5A 75.043 585 117 21 1064 1637 531019309 531019875 8.090000e-61 244.0
28 TraesCS1B01G064600 chr5D 82.895 152 19 6 2344 2493 433386716 433386570 2.360000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G064600 chr1B 49015574 49018497 2923 False 5400.0 5400 100.000000 1 2924 1 chr1B.!!$F1 2923
1 TraesCS1B01G064600 chr1B 49428807 49430913 2106 False 1283.5 2265 93.263000 5 1997 2 chr1B.!!$F4 1992
2 TraesCS1B01G064600 chr2D 22767115 22768709 1594 False 2187.0 2187 91.998000 520 2067 1 chr2D.!!$F1 1547
3 TraesCS1B01G064600 chr2A 24363294 24365038 1744 False 822.0 2010 93.208333 29 2067 3 chr2A.!!$F2 2038
4 TraesCS1B01G064600 chr5B 660721002 660721609 607 True 713.0 713 87.774000 2292 2924 1 chr5B.!!$R1 632
5 TraesCS1B01G064600 chr5B 504775438 504776004 566 False 250.0 250 75.214000 1064 1637 1 chr5B.!!$F1 573
6 TraesCS1B01G064600 chr7A 613760364 613760955 591 True 350.0 590 89.750000 2275 2924 2 chr7A.!!$R2 649
7 TraesCS1B01G064600 chr7A 200206918 200207460 542 True 326.9 577 90.390000 2297 2897 2 chr7A.!!$R1 600
8 TraesCS1B01G064600 chr5A 531019309 531019875 566 False 244.0 244 75.043000 1064 1637 1 chr5A.!!$F1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 301 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.0 0.0 0.0 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2202 2667 0.02877 TTTCGACAACGCCAAGCTTG 59.971 50.0 19.93 19.93 39.58 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.867753 GACTCTATCCTGCGTGCGTG 60.868 60.000 0.00 0.00 0.00 5.34
80 81 4.513406 AATGGTAAAATAGGAAGCCCGA 57.487 40.909 0.00 0.00 37.58 5.14
92 93 4.520846 GCCCGATTCTGCGTTGCG 62.521 66.667 0.00 0.00 0.00 4.85
113 114 0.248215 GAATGTTCCTTGGCGCATCG 60.248 55.000 10.83 0.00 0.00 3.84
218 221 3.676049 CGTACCTCAGCATACAAGAGCAA 60.676 47.826 0.00 0.00 0.00 3.91
219 222 2.983229 ACCTCAGCATACAAGAGCAAG 58.017 47.619 0.00 0.00 0.00 4.01
220 223 2.286872 CCTCAGCATACAAGAGCAAGG 58.713 52.381 0.00 0.00 32.23 3.61
221 224 1.669779 CTCAGCATACAAGAGCAAGGC 59.330 52.381 0.00 0.00 0.00 4.35
222 225 0.376152 CAGCATACAAGAGCAAGGCG 59.624 55.000 0.00 0.00 0.00 5.52
223 226 0.250234 AGCATACAAGAGCAAGGCGA 59.750 50.000 0.00 0.00 0.00 5.54
224 227 1.086696 GCATACAAGAGCAAGGCGAA 58.913 50.000 0.00 0.00 0.00 4.70
225 228 1.672881 GCATACAAGAGCAAGGCGAAT 59.327 47.619 0.00 0.00 0.00 3.34
226 229 2.286654 GCATACAAGAGCAAGGCGAATC 60.287 50.000 0.00 0.00 0.00 2.52
227 230 2.760634 TACAAGAGCAAGGCGAATCA 57.239 45.000 0.00 0.00 0.00 2.57
228 231 1.896220 ACAAGAGCAAGGCGAATCAA 58.104 45.000 0.00 0.00 0.00 2.57
229 232 1.537202 ACAAGAGCAAGGCGAATCAAC 59.463 47.619 0.00 0.00 0.00 3.18
230 233 1.135575 CAAGAGCAAGGCGAATCAACC 60.136 52.381 0.00 0.00 0.00 3.77
231 234 0.326264 AGAGCAAGGCGAATCAACCT 59.674 50.000 0.00 0.00 38.14 3.50
232 235 0.449388 GAGCAAGGCGAATCAACCTG 59.551 55.000 0.00 0.00 36.07 4.00
233 236 0.250901 AGCAAGGCGAATCAACCTGT 60.251 50.000 0.00 0.00 36.07 4.00
234 237 0.109597 GCAAGGCGAATCAACCTGTG 60.110 55.000 0.00 0.00 36.07 3.66
235 238 0.523072 CAAGGCGAATCAACCTGTGG 59.477 55.000 0.00 0.00 36.07 4.17
236 239 0.110486 AAGGCGAATCAACCTGTGGT 59.890 50.000 0.00 0.00 36.07 4.16
247 250 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
248 251 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
249 252 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
250 253 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
251 254 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
252 255 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
253 256 2.509964 GTGGTTGGATGGTTAGAGGGAT 59.490 50.000 0.00 0.00 0.00 3.85
254 257 3.053619 GTGGTTGGATGGTTAGAGGGATT 60.054 47.826 0.00 0.00 0.00 3.01
255 258 3.053693 TGGTTGGATGGTTAGAGGGATTG 60.054 47.826 0.00 0.00 0.00 2.67
256 259 3.053619 GGTTGGATGGTTAGAGGGATTGT 60.054 47.826 0.00 0.00 0.00 2.71
257 260 3.931907 TGGATGGTTAGAGGGATTGTG 57.068 47.619 0.00 0.00 0.00 3.33
258 261 2.509548 TGGATGGTTAGAGGGATTGTGG 59.490 50.000 0.00 0.00 0.00 4.17
259 262 2.509964 GGATGGTTAGAGGGATTGTGGT 59.490 50.000 0.00 0.00 0.00 4.16
260 263 3.714798 GGATGGTTAGAGGGATTGTGGTA 59.285 47.826 0.00 0.00 0.00 3.25
261 264 4.351111 GGATGGTTAGAGGGATTGTGGTAT 59.649 45.833 0.00 0.00 0.00 2.73
262 265 5.513267 GGATGGTTAGAGGGATTGTGGTATC 60.513 48.000 0.00 0.00 0.00 2.24
263 266 3.714798 TGGTTAGAGGGATTGTGGTATCC 59.285 47.826 0.00 0.00 42.84 2.59
268 271 3.421567 GGATTGTGGTATCCCCAGC 57.578 57.895 0.00 0.00 46.45 4.85
269 272 0.178990 GGATTGTGGTATCCCCAGCC 60.179 60.000 0.00 0.00 46.45 4.85
270 273 0.178990 GATTGTGGTATCCCCAGCCC 60.179 60.000 0.00 0.00 46.45 5.19
271 274 0.923729 ATTGTGGTATCCCCAGCCCA 60.924 55.000 0.00 0.00 46.45 5.36
272 275 1.858739 TTGTGGTATCCCCAGCCCAC 61.859 60.000 0.00 0.00 46.45 4.61
273 276 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
274 277 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
275 278 2.757124 GGTATCCCCAGCCCACCAG 61.757 68.421 0.00 0.00 0.00 4.00
276 279 1.692749 GTATCCCCAGCCCACCAGA 60.693 63.158 0.00 0.00 0.00 3.86
277 280 1.384502 TATCCCCAGCCCACCAGAG 60.385 63.158 0.00 0.00 0.00 3.35
278 281 2.194951 TATCCCCAGCCCACCAGAGT 62.195 60.000 0.00 0.00 0.00 3.24
279 282 3.260100 CCCCAGCCCACCAGAGTT 61.260 66.667 0.00 0.00 0.00 3.01
280 283 2.352805 CCCAGCCCACCAGAGTTC 59.647 66.667 0.00 0.00 0.00 3.01
281 284 2.528818 CCCAGCCCACCAGAGTTCA 61.529 63.158 0.00 0.00 0.00 3.18
282 285 1.455849 CCAGCCCACCAGAGTTCAA 59.544 57.895 0.00 0.00 0.00 2.69
283 286 0.178992 CCAGCCCACCAGAGTTCAAA 60.179 55.000 0.00 0.00 0.00 2.69
284 287 1.548582 CCAGCCCACCAGAGTTCAAAT 60.549 52.381 0.00 0.00 0.00 2.32
285 288 1.815003 CAGCCCACCAGAGTTCAAATC 59.185 52.381 0.00 0.00 0.00 2.17
286 289 1.177401 GCCCACCAGAGTTCAAATCC 58.823 55.000 0.00 0.00 0.00 3.01
287 290 1.272147 GCCCACCAGAGTTCAAATCCT 60.272 52.381 0.00 0.00 0.00 3.24
288 291 2.440409 CCCACCAGAGTTCAAATCCTG 58.560 52.381 0.00 0.00 0.00 3.86
292 295 1.815003 CCAGAGTTCAAATCCTGGTGC 59.185 52.381 0.00 0.00 40.84 5.01
293 296 2.553904 CCAGAGTTCAAATCCTGGTGCT 60.554 50.000 0.00 0.00 40.84 4.40
294 297 2.746362 CAGAGTTCAAATCCTGGTGCTC 59.254 50.000 0.00 0.00 0.00 4.26
295 298 1.734465 GAGTTCAAATCCTGGTGCTCG 59.266 52.381 0.00 0.00 0.00 5.03
296 299 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
297 300 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
298 301 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
299 302 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
300 303 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
301 304 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
302 305 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
303 306 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
304 307 2.288666 TCCTGGTGCTCGCATTTATTC 58.711 47.619 0.00 0.00 0.00 1.75
305 308 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
306 309 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
307 310 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
308 311 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
309 312 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
310 313 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
311 314 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
312 315 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
313 316 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
314 317 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
315 318 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
316 319 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
317 320 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
318 321 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
319 322 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
320 323 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
327 330 5.741388 CTGGATTTATTTCAGGAGTTCCG 57.259 43.478 0.00 0.00 42.08 4.30
328 331 4.523083 TGGATTTATTTCAGGAGTTCCGG 58.477 43.478 0.00 0.00 42.08 5.14
329 332 3.315470 GGATTTATTTCAGGAGTTCCGGC 59.685 47.826 0.00 0.00 42.08 6.13
330 333 2.018542 TTATTTCAGGAGTTCCGGCG 57.981 50.000 0.00 0.00 42.08 6.46
331 334 1.187974 TATTTCAGGAGTTCCGGCGA 58.812 50.000 9.30 0.00 42.08 5.54
332 335 0.541863 ATTTCAGGAGTTCCGGCGAT 59.458 50.000 9.30 0.00 42.08 4.58
333 336 0.391130 TTTCAGGAGTTCCGGCGATG 60.391 55.000 9.30 0.00 42.08 3.84
334 337 2.852495 TTCAGGAGTTCCGGCGATGC 62.852 60.000 9.30 0.00 42.08 3.91
335 338 4.514577 AGGAGTTCCGGCGATGCG 62.515 66.667 9.30 0.00 42.08 4.73
345 348 4.505217 GCGATGCGCGTTCAGTGG 62.505 66.667 8.43 0.00 44.55 4.00
346 349 3.853330 CGATGCGCGTTCAGTGGG 61.853 66.667 8.43 0.00 34.64 4.61
347 350 2.434185 GATGCGCGTTCAGTGGGA 60.434 61.111 8.43 0.00 0.00 4.37
348 351 2.434884 ATGCGCGTTCAGTGGGAG 60.435 61.111 8.43 0.00 0.00 4.30
349 352 3.958147 ATGCGCGTTCAGTGGGAGG 62.958 63.158 8.43 0.00 0.00 4.30
350 353 4.373116 GCGCGTTCAGTGGGAGGA 62.373 66.667 8.43 0.00 0.00 3.71
351 354 2.125912 CGCGTTCAGTGGGAGGAG 60.126 66.667 0.00 0.00 0.00 3.69
352 355 2.636412 CGCGTTCAGTGGGAGGAGA 61.636 63.158 0.00 0.00 0.00 3.71
353 356 1.079750 GCGTTCAGTGGGAGGAGAC 60.080 63.158 0.00 0.00 0.00 3.36
354 357 1.213013 CGTTCAGTGGGAGGAGACG 59.787 63.158 0.00 0.00 0.00 4.18
355 358 1.524863 CGTTCAGTGGGAGGAGACGT 61.525 60.000 0.00 0.00 0.00 4.34
356 359 0.680061 GTTCAGTGGGAGGAGACGTT 59.320 55.000 0.00 0.00 0.00 3.99
357 360 1.070289 GTTCAGTGGGAGGAGACGTTT 59.930 52.381 0.00 0.00 0.00 3.60
358 361 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
359 362 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
360 363 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
378 381 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
379 382 2.099831 CGACGACGAGGTGCCTAC 59.900 66.667 0.00 0.00 42.66 3.18
380 383 2.099831 GACGACGAGGTGCCTACG 59.900 66.667 0.00 9.22 0.00 3.51
381 384 3.392595 GACGACGAGGTGCCTACGG 62.393 68.421 0.00 1.18 0.00 4.02
382 385 3.437795 CGACGAGGTGCCTACGGT 61.438 66.667 12.22 3.01 0.00 4.83
383 386 2.181021 GACGAGGTGCCTACGGTG 59.819 66.667 12.22 0.00 0.00 4.94
384 387 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
385 388 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
386 389 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
387 390 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
388 391 0.108756 GAGGTGCCTACGGTGACTTC 60.109 60.000 0.00 0.00 0.00 3.01
389 392 1.445582 GGTGCCTACGGTGACTTCG 60.446 63.158 0.00 0.00 0.00 3.79
390 393 1.288127 GTGCCTACGGTGACTTCGT 59.712 57.895 0.00 0.00 43.64 3.85
391 394 0.523072 GTGCCTACGGTGACTTCGTA 59.477 55.000 0.00 0.00 41.38 3.43
392 395 1.068333 GTGCCTACGGTGACTTCGTAA 60.068 52.381 0.00 0.00 41.62 3.18
393 396 1.612950 TGCCTACGGTGACTTCGTAAA 59.387 47.619 0.00 0.00 41.62 2.01
394 397 2.231964 TGCCTACGGTGACTTCGTAAAT 59.768 45.455 0.00 0.00 41.62 1.40
395 398 3.256558 GCCTACGGTGACTTCGTAAATT 58.743 45.455 0.00 0.00 41.62 1.82
396 399 3.681417 GCCTACGGTGACTTCGTAAATTT 59.319 43.478 0.00 0.00 41.62 1.82
397 400 4.201656 GCCTACGGTGACTTCGTAAATTTC 60.202 45.833 0.00 0.00 41.62 2.17
398 401 4.925054 CCTACGGTGACTTCGTAAATTTCA 59.075 41.667 0.00 0.00 41.62 2.69
399 402 5.579511 CCTACGGTGACTTCGTAAATTTCAT 59.420 40.000 0.00 0.00 41.62 2.57
400 403 5.277601 ACGGTGACTTCGTAAATTTCATG 57.722 39.130 0.00 0.00 39.22 3.07
401 404 4.992319 ACGGTGACTTCGTAAATTTCATGA 59.008 37.500 0.00 0.00 39.22 3.07
402 405 5.642063 ACGGTGACTTCGTAAATTTCATGAT 59.358 36.000 0.00 0.00 39.22 2.45
403 406 5.959527 CGGTGACTTCGTAAATTTCATGATG 59.040 40.000 0.00 0.00 0.00 3.07
404 407 6.183360 CGGTGACTTCGTAAATTTCATGATGA 60.183 38.462 0.00 0.00 0.00 2.92
405 408 7.465916 CGGTGACTTCGTAAATTTCATGATGAT 60.466 37.037 0.00 0.00 0.00 2.45
406 409 8.826710 GGTGACTTCGTAAATTTCATGATGATA 58.173 33.333 0.00 0.00 0.00 2.15
409 412 9.322776 GACTTCGTAAATTTCATGATGATATGC 57.677 33.333 0.00 0.00 0.00 3.14
410 413 8.839343 ACTTCGTAAATTTCATGATGATATGCA 58.161 29.630 0.00 0.00 0.00 3.96
411 414 9.326339 CTTCGTAAATTTCATGATGATATGCAG 57.674 33.333 0.00 0.00 0.00 4.41
412 415 7.809665 TCGTAAATTTCATGATGATATGCAGG 58.190 34.615 0.00 0.00 0.00 4.85
413 416 6.525628 CGTAAATTTCATGATGATATGCAGGC 59.474 38.462 0.00 0.00 0.00 4.85
414 417 6.665992 AAATTTCATGATGATATGCAGGCT 57.334 33.333 0.00 0.00 0.00 4.58
415 418 5.899120 ATTTCATGATGATATGCAGGCTC 57.101 39.130 0.00 0.00 0.00 4.70
416 419 4.360951 TTCATGATGATATGCAGGCTCA 57.639 40.909 0.00 0.00 0.00 4.26
417 420 3.939066 TCATGATGATATGCAGGCTCAG 58.061 45.455 0.00 0.00 0.00 3.35
418 421 3.326880 TCATGATGATATGCAGGCTCAGT 59.673 43.478 0.00 0.00 0.00 3.41
419 422 3.397849 TGATGATATGCAGGCTCAGTC 57.602 47.619 0.00 0.00 0.00 3.51
420 423 2.970640 TGATGATATGCAGGCTCAGTCT 59.029 45.455 0.00 0.00 0.00 3.24
421 424 3.390311 TGATGATATGCAGGCTCAGTCTT 59.610 43.478 0.00 0.00 0.00 3.01
422 425 3.920231 TGATATGCAGGCTCAGTCTTT 57.080 42.857 0.00 0.00 0.00 2.52
423 426 3.801698 TGATATGCAGGCTCAGTCTTTC 58.198 45.455 0.00 0.00 0.00 2.62
424 427 2.299993 TATGCAGGCTCAGTCTTTCG 57.700 50.000 0.00 0.00 0.00 3.46
425 428 0.610174 ATGCAGGCTCAGTCTTTCGA 59.390 50.000 0.00 0.00 0.00 3.71
426 429 0.392706 TGCAGGCTCAGTCTTTCGAA 59.607 50.000 0.00 0.00 0.00 3.71
427 430 1.074752 GCAGGCTCAGTCTTTCGAAG 58.925 55.000 0.00 0.00 0.00 3.79
428 431 1.719600 CAGGCTCAGTCTTTCGAAGG 58.280 55.000 0.00 0.00 0.00 3.46
429 432 1.001406 CAGGCTCAGTCTTTCGAAGGT 59.999 52.381 7.20 0.00 0.00 3.50
430 433 1.001406 AGGCTCAGTCTTTCGAAGGTG 59.999 52.381 7.20 0.00 0.00 4.00
431 434 0.793250 GCTCAGTCTTTCGAAGGTGC 59.207 55.000 7.20 2.27 0.00 5.01
432 435 1.606737 GCTCAGTCTTTCGAAGGTGCT 60.607 52.381 7.20 4.49 0.00 4.40
433 436 2.760374 CTCAGTCTTTCGAAGGTGCTT 58.240 47.619 7.20 0.00 0.00 3.91
434 437 3.861131 GCTCAGTCTTTCGAAGGTGCTTA 60.861 47.826 7.20 0.00 0.00 3.09
435 438 4.499183 CTCAGTCTTTCGAAGGTGCTTAT 58.501 43.478 7.20 0.00 0.00 1.73
436 439 5.651530 CTCAGTCTTTCGAAGGTGCTTATA 58.348 41.667 7.20 0.00 0.00 0.98
437 440 5.651530 TCAGTCTTTCGAAGGTGCTTATAG 58.348 41.667 7.20 0.00 0.00 1.31
438 441 4.806247 CAGTCTTTCGAAGGTGCTTATAGG 59.194 45.833 7.20 0.00 0.00 2.57
439 442 4.120589 GTCTTTCGAAGGTGCTTATAGGG 58.879 47.826 7.20 0.00 0.00 3.53
440 443 3.134081 TCTTTCGAAGGTGCTTATAGGGG 59.866 47.826 7.20 0.00 0.00 4.79
441 444 2.170012 TCGAAGGTGCTTATAGGGGT 57.830 50.000 0.00 0.00 0.00 4.95
442 445 3.317455 TCGAAGGTGCTTATAGGGGTA 57.683 47.619 0.00 0.00 0.00 3.69
443 446 3.228453 TCGAAGGTGCTTATAGGGGTAG 58.772 50.000 0.00 0.00 0.00 3.18
444 447 2.299297 CGAAGGTGCTTATAGGGGTAGG 59.701 54.545 0.00 0.00 0.00 3.18
445 448 2.417719 AGGTGCTTATAGGGGTAGGG 57.582 55.000 0.00 0.00 0.00 3.53
446 449 1.584105 AGGTGCTTATAGGGGTAGGGT 59.416 52.381 0.00 0.00 0.00 4.34
447 450 1.697982 GGTGCTTATAGGGGTAGGGTG 59.302 57.143 0.00 0.00 0.00 4.61
448 451 2.405559 GTGCTTATAGGGGTAGGGTGT 58.594 52.381 0.00 0.00 0.00 4.16
449 452 2.104281 GTGCTTATAGGGGTAGGGTGTG 59.896 54.545 0.00 0.00 0.00 3.82
450 453 1.071857 GCTTATAGGGGTAGGGTGTGC 59.928 57.143 0.00 0.00 0.00 4.57
451 454 1.343465 CTTATAGGGGTAGGGTGTGCG 59.657 57.143 0.00 0.00 0.00 5.34
452 455 0.262580 TATAGGGGTAGGGTGTGCGT 59.737 55.000 0.00 0.00 0.00 5.24
453 456 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
454 457 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
455 458 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
456 459 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
457 460 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
458 461 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
461 464 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
462 465 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
463 466 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
464 467 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
465 468 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
466 469 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
467 470 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
468 471 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
469 472 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
470 473 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
471 474 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
472 475 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
473 476 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
474 477 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
475 478 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
476 479 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
477 480 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
478 481 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
479 482 4.830600 TGCGTTCATAGGGATGAGTGTATA 59.169 41.667 0.00 0.00 43.03 1.47
480 483 5.162075 GCGTTCATAGGGATGAGTGTATAC 58.838 45.833 0.00 0.00 43.03 1.47
481 484 5.278808 GCGTTCATAGGGATGAGTGTATACA 60.279 44.000 0.08 0.08 43.03 2.29
482 485 6.150318 CGTTCATAGGGATGAGTGTATACAC 58.850 44.000 25.51 25.51 43.03 2.90
496 499 6.713821 GTGTATACACGTATATATGAGCGC 57.286 41.667 19.71 0.00 37.10 5.92
497 500 6.484540 GTGTATACACGTATATATGAGCGCT 58.515 40.000 19.71 11.27 37.10 5.92
498 501 6.965500 GTGTATACACGTATATATGAGCGCTT 59.035 38.462 19.71 0.00 37.10 4.68
499 502 6.964934 TGTATACACGTATATATGAGCGCTTG 59.035 38.462 13.26 3.77 31.45 4.01
500 503 2.987149 ACACGTATATATGAGCGCTTGC 59.013 45.455 13.26 0.00 39.58 4.01
501 504 2.026860 CACGTATATATGAGCGCTTGCG 59.973 50.000 13.26 12.73 45.69 4.85
502 505 2.251040 CGTATATATGAGCGCTTGCGT 58.749 47.619 13.26 3.24 45.69 5.24
503 506 2.276540 CGTATATATGAGCGCTTGCGTC 59.723 50.000 13.26 12.36 45.69 5.19
504 507 2.732412 ATATATGAGCGCTTGCGTCT 57.268 45.000 13.26 13.17 45.69 4.18
505 508 1.770957 TATATGAGCGCTTGCGTCTG 58.229 50.000 13.26 0.00 45.69 3.51
506 509 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
507 510 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
508 511 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
509 512 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
510 513 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
511 514 1.733041 GCGCTTGCGTCTGTACTGA 60.733 57.895 16.38 0.00 0.00 3.41
512 515 1.078759 GCGCTTGCGTCTGTACTGAT 61.079 55.000 16.38 0.00 0.00 2.90
513 516 0.642291 CGCTTGCGTCTGTACTGATG 59.358 55.000 15.57 15.57 0.00 3.07
514 517 1.714794 GCTTGCGTCTGTACTGATGT 58.285 50.000 19.48 0.00 0.00 3.06
515 518 2.731027 CGCTTGCGTCTGTACTGATGTA 60.731 50.000 19.48 14.28 0.00 2.29
516 519 2.854777 GCTTGCGTCTGTACTGATGTAG 59.145 50.000 19.48 17.22 0.00 2.74
517 520 2.561733 TGCGTCTGTACTGATGTAGC 57.438 50.000 19.48 15.47 0.00 3.58
518 521 1.134367 TGCGTCTGTACTGATGTAGCC 59.866 52.381 19.48 6.98 0.00 3.93
792 1214 0.606401 CATGCACGTTCACTTCCCCT 60.606 55.000 0.00 0.00 0.00 4.79
798 1220 2.021457 ACGTTCACTTCCCCTTGTTTG 58.979 47.619 0.00 0.00 0.00 2.93
802 1224 2.294074 TCACTTCCCCTTGTTTGTTCG 58.706 47.619 0.00 0.00 0.00 3.95
880 1309 3.769844 ACACATCACCTACTCCTACCTTG 59.230 47.826 0.00 0.00 0.00 3.61
941 1374 4.894114 CCTATATATAGACCTCCCCAACGG 59.106 50.000 19.51 0.00 32.05 4.44
1068 1510 2.487428 CTGGTCTCCTGTCTCGCG 59.513 66.667 0.00 0.00 0.00 5.87
1928 2373 1.524621 GTGGATGGGCCTGATCGTG 60.525 63.158 4.53 0.00 37.63 4.35
1942 2391 3.897325 TGATCGTGTATATCGCTGGTTC 58.103 45.455 0.00 0.00 0.00 3.62
2055 2520 8.050778 AGTTGTTTGTTGTTCTAGTCAATGAA 57.949 30.769 6.45 3.48 0.00 2.57
2093 2558 5.938438 AAAGACTCTCAAGACAATGAAGC 57.062 39.130 0.00 0.00 0.00 3.86
2094 2559 4.888326 AGACTCTCAAGACAATGAAGCT 57.112 40.909 0.00 0.00 0.00 3.74
2095 2560 5.226194 AGACTCTCAAGACAATGAAGCTT 57.774 39.130 0.00 0.00 0.00 3.74
2096 2561 4.996122 AGACTCTCAAGACAATGAAGCTTG 59.004 41.667 2.10 0.00 40.16 4.01
2097 2562 4.070716 ACTCTCAAGACAATGAAGCTTGG 58.929 43.478 2.10 0.00 39.47 3.61
2098 2563 4.202398 ACTCTCAAGACAATGAAGCTTGGA 60.202 41.667 2.10 0.00 39.47 3.53
2099 2564 4.717877 TCTCAAGACAATGAAGCTTGGAA 58.282 39.130 2.10 0.00 39.47 3.53
2100 2565 5.319453 TCTCAAGACAATGAAGCTTGGAAT 58.681 37.500 2.10 0.00 39.47 3.01
2101 2566 6.475504 TCTCAAGACAATGAAGCTTGGAATA 58.524 36.000 2.10 0.00 39.47 1.75
2102 2567 6.372659 TCTCAAGACAATGAAGCTTGGAATAC 59.627 38.462 2.10 0.00 39.47 1.89
2103 2568 6.003326 TCAAGACAATGAAGCTTGGAATACA 58.997 36.000 2.10 0.00 39.47 2.29
2104 2569 6.149973 TCAAGACAATGAAGCTTGGAATACAG 59.850 38.462 2.10 0.00 39.47 2.74
2105 2570 4.397417 AGACAATGAAGCTTGGAATACAGC 59.603 41.667 2.10 0.00 0.00 4.40
2106 2571 4.081406 ACAATGAAGCTTGGAATACAGCA 58.919 39.130 2.10 0.00 0.00 4.41
2107 2572 4.708421 ACAATGAAGCTTGGAATACAGCAT 59.292 37.500 2.10 0.00 0.00 3.79
2108 2573 5.186409 ACAATGAAGCTTGGAATACAGCATT 59.814 36.000 2.10 0.69 0.00 3.56
2109 2574 4.707030 TGAAGCTTGGAATACAGCATTG 57.293 40.909 2.10 0.00 0.00 2.82
2110 2575 4.081406 TGAAGCTTGGAATACAGCATTGT 58.919 39.130 2.10 0.00 41.39 2.71
2111 2576 4.156556 TGAAGCTTGGAATACAGCATTGTC 59.843 41.667 2.10 0.00 38.76 3.18
2112 2577 3.019564 AGCTTGGAATACAGCATTGTCC 58.980 45.455 0.00 0.00 38.76 4.02
2113 2578 2.754552 GCTTGGAATACAGCATTGTCCA 59.245 45.455 0.00 0.00 38.76 4.02
2114 2579 3.193267 GCTTGGAATACAGCATTGTCCAA 59.807 43.478 3.60 3.60 36.75 3.53
2115 2580 4.990257 CTTGGAATACAGCATTGTCCAAG 58.010 43.478 14.45 14.45 44.01 3.61
2116 2581 3.355378 TGGAATACAGCATTGTCCAAGG 58.645 45.455 0.00 0.00 38.76 3.61
2117 2582 2.689983 GGAATACAGCATTGTCCAAGGG 59.310 50.000 0.00 0.00 38.76 3.95
2118 2583 2.442236 ATACAGCATTGTCCAAGGGG 57.558 50.000 0.00 0.00 38.76 4.79
2119 2584 0.331278 TACAGCATTGTCCAAGGGGG 59.669 55.000 0.00 0.00 38.76 5.40
2120 2585 1.383799 CAGCATTGTCCAAGGGGGA 59.616 57.895 0.00 0.00 45.89 4.81
2129 2594 1.952621 TCCAAGGGGGAGTGTTAGAG 58.047 55.000 0.00 0.00 42.15 2.43
2130 2595 1.435563 TCCAAGGGGGAGTGTTAGAGA 59.564 52.381 0.00 0.00 42.15 3.10
2131 2596 1.555533 CCAAGGGGGAGTGTTAGAGAC 59.444 57.143 0.00 0.00 40.01 3.36
2132 2597 1.555533 CAAGGGGGAGTGTTAGAGACC 59.444 57.143 0.00 0.00 0.00 3.85
2133 2598 0.790993 AGGGGGAGTGTTAGAGACCA 59.209 55.000 0.00 0.00 0.00 4.02
2134 2599 1.151413 AGGGGGAGTGTTAGAGACCAA 59.849 52.381 0.00 0.00 0.00 3.67
2135 2600 2.197465 GGGGGAGTGTTAGAGACCAAT 58.803 52.381 0.00 0.00 0.00 3.16
2136 2601 2.576648 GGGGGAGTGTTAGAGACCAATT 59.423 50.000 0.00 0.00 0.00 2.32
2137 2602 3.778629 GGGGGAGTGTTAGAGACCAATTA 59.221 47.826 0.00 0.00 0.00 1.40
2138 2603 4.141688 GGGGGAGTGTTAGAGACCAATTAG 60.142 50.000 0.00 0.00 0.00 1.73
2139 2604 4.443621 GGGAGTGTTAGAGACCAATTAGC 58.556 47.826 0.00 0.00 0.00 3.09
2140 2605 4.081087 GGGAGTGTTAGAGACCAATTAGCA 60.081 45.833 0.00 0.00 0.00 3.49
2141 2606 5.112686 GGAGTGTTAGAGACCAATTAGCAG 58.887 45.833 0.00 0.00 0.00 4.24
2142 2607 5.337652 GGAGTGTTAGAGACCAATTAGCAGT 60.338 44.000 0.00 0.00 0.00 4.40
2143 2608 6.115448 AGTGTTAGAGACCAATTAGCAGTT 57.885 37.500 0.00 0.00 0.00 3.16
2144 2609 7.241042 AGTGTTAGAGACCAATTAGCAGTTA 57.759 36.000 0.00 0.00 0.00 2.24
2145 2610 7.324178 AGTGTTAGAGACCAATTAGCAGTTAG 58.676 38.462 0.00 0.00 0.00 2.34
2146 2611 7.038941 AGTGTTAGAGACCAATTAGCAGTTAGT 60.039 37.037 0.00 0.00 0.00 2.24
2147 2612 8.248945 GTGTTAGAGACCAATTAGCAGTTAGTA 58.751 37.037 0.00 0.00 0.00 1.82
2148 2613 8.467598 TGTTAGAGACCAATTAGCAGTTAGTAG 58.532 37.037 0.00 0.00 0.00 2.57
2149 2614 5.908341 AGAGACCAATTAGCAGTTAGTAGC 58.092 41.667 0.00 0.00 0.00 3.58
2150 2615 5.422331 AGAGACCAATTAGCAGTTAGTAGCA 59.578 40.000 0.00 0.00 0.00 3.49
2151 2616 5.665459 AGACCAATTAGCAGTTAGTAGCAG 58.335 41.667 0.00 0.00 0.00 4.24
2152 2617 5.187967 AGACCAATTAGCAGTTAGTAGCAGT 59.812 40.000 0.00 0.00 0.00 4.40
2153 2618 5.805728 ACCAATTAGCAGTTAGTAGCAGTT 58.194 37.500 0.00 0.00 0.00 3.16
2154 2619 6.942976 ACCAATTAGCAGTTAGTAGCAGTTA 58.057 36.000 0.00 0.00 0.00 2.24
2155 2620 7.391620 ACCAATTAGCAGTTAGTAGCAGTTAA 58.608 34.615 0.00 0.00 0.00 2.01
2156 2621 7.333672 ACCAATTAGCAGTTAGTAGCAGTTAAC 59.666 37.037 0.00 0.00 0.00 2.01
2157 2622 7.333423 CCAATTAGCAGTTAGTAGCAGTTAACA 59.667 37.037 8.61 0.00 33.30 2.41
2158 2623 8.383619 CAATTAGCAGTTAGTAGCAGTTAACAG 58.616 37.037 8.61 0.17 33.30 3.16
2159 2624 4.246458 AGCAGTTAGTAGCAGTTAACAGC 58.754 43.478 14.61 14.61 40.46 4.40
2160 2625 3.994392 GCAGTTAGTAGCAGTTAACAGCA 59.006 43.478 22.93 8.11 40.13 4.41
2161 2626 4.092091 GCAGTTAGTAGCAGTTAACAGCAG 59.908 45.833 22.93 4.65 40.13 4.24
2162 2627 5.230942 CAGTTAGTAGCAGTTAACAGCAGT 58.769 41.667 22.93 14.20 33.30 4.40
2163 2628 5.696724 CAGTTAGTAGCAGTTAACAGCAGTT 59.303 40.000 22.93 10.93 41.74 3.16
2164 2629 6.866770 CAGTTAGTAGCAGTTAACAGCAGTTA 59.133 38.462 22.93 10.07 39.15 2.24
2165 2630 7.062371 CAGTTAGTAGCAGTTAACAGCAGTTAG 59.938 40.741 22.93 3.71 41.00 2.34
2166 2631 4.246458 AGTAGCAGTTAACAGCAGTTAGC 58.754 43.478 22.93 7.62 41.00 3.09
2186 2651 2.731976 GCATGTAGCGTTAGACATAGGC 59.268 50.000 0.00 0.00 34.52 3.93
2187 2652 3.553096 GCATGTAGCGTTAGACATAGGCT 60.553 47.826 0.00 0.00 34.52 4.58
2188 2653 4.321008 GCATGTAGCGTTAGACATAGGCTA 60.321 45.833 0.00 0.00 34.52 3.93
2189 2654 5.622460 GCATGTAGCGTTAGACATAGGCTAT 60.622 44.000 0.00 0.00 38.35 2.97
2190 2655 5.372547 TGTAGCGTTAGACATAGGCTATG 57.627 43.478 28.48 28.48 38.35 2.23
2206 2671 3.312697 GGCTATGTAGGCAGTTAACAAGC 59.687 47.826 8.61 11.15 46.94 4.01
2207 2672 4.192317 GCTATGTAGGCAGTTAACAAGCT 58.808 43.478 18.55 10.04 31.01 3.74
2208 2673 4.636206 GCTATGTAGGCAGTTAACAAGCTT 59.364 41.667 18.55 15.00 31.01 3.74
2209 2674 5.447818 GCTATGTAGGCAGTTAACAAGCTTG 60.448 44.000 24.84 24.84 31.01 4.01
2210 2675 3.146066 TGTAGGCAGTTAACAAGCTTGG 58.854 45.455 29.18 12.10 0.00 3.61
2211 2676 0.961753 AGGCAGTTAACAAGCTTGGC 59.038 50.000 29.18 20.47 0.00 4.52
2212 2677 0.387239 GGCAGTTAACAAGCTTGGCG 60.387 55.000 29.18 11.98 0.00 5.69
2213 2678 0.310854 GCAGTTAACAAGCTTGGCGT 59.689 50.000 29.18 16.50 0.00 5.68
2214 2679 1.269051 GCAGTTAACAAGCTTGGCGTT 60.269 47.619 29.18 17.16 0.00 4.84
2215 2680 2.384382 CAGTTAACAAGCTTGGCGTTG 58.616 47.619 29.18 16.32 0.00 4.10
2216 2681 2.021457 AGTTAACAAGCTTGGCGTTGT 58.979 42.857 29.18 5.99 38.56 3.32
2217 2682 2.032924 AGTTAACAAGCTTGGCGTTGTC 59.967 45.455 29.18 12.76 35.83 3.18
2218 2683 0.584396 TAACAAGCTTGGCGTTGTCG 59.416 50.000 29.18 2.17 35.83 4.35
2219 2684 1.092921 AACAAGCTTGGCGTTGTCGA 61.093 50.000 29.18 0.00 35.83 4.20
2220 2685 1.092921 ACAAGCTTGGCGTTGTCGAA 61.093 50.000 29.18 0.00 39.71 3.71
2221 2686 0.028770 CAAGCTTGGCGTTGTCGAAA 59.971 50.000 19.14 0.00 39.71 3.46
2222 2687 0.028902 AAGCTTGGCGTTGTCGAAAC 59.971 50.000 0.00 0.00 39.71 2.78
2223 2688 1.721133 GCTTGGCGTTGTCGAAACG 60.721 57.895 20.87 20.87 45.56 3.60
2228 2693 4.471814 CGTTGTCGAAACGCTGTG 57.528 55.556 16.01 0.00 39.71 3.66
2229 2694 1.634225 CGTTGTCGAAACGCTGTGT 59.366 52.632 16.01 0.00 39.71 3.72
2230 2695 0.381428 CGTTGTCGAAACGCTGTGTC 60.381 55.000 16.01 0.00 39.71 3.67
2231 2696 0.042448 GTTGTCGAAACGCTGTGTCC 60.042 55.000 0.00 0.00 0.00 4.02
2232 2697 0.460459 TTGTCGAAACGCTGTGTCCA 60.460 50.000 0.00 0.00 0.00 4.02
2233 2698 1.149361 TGTCGAAACGCTGTGTCCAC 61.149 55.000 0.00 0.00 0.00 4.02
2234 2699 1.593209 TCGAAACGCTGTGTCCACC 60.593 57.895 0.00 0.00 0.00 4.61
2235 2700 2.604174 CGAAACGCTGTGTCCACCC 61.604 63.158 0.00 0.00 0.00 4.61
2236 2701 1.525077 GAAACGCTGTGTCCACCCA 60.525 57.895 0.00 0.00 0.00 4.51
2237 2702 1.077357 AAACGCTGTGTCCACCCAA 60.077 52.632 0.00 0.00 0.00 4.12
2238 2703 0.681564 AAACGCTGTGTCCACCCAAA 60.682 50.000 0.00 0.00 0.00 3.28
2239 2704 1.101049 AACGCTGTGTCCACCCAAAG 61.101 55.000 0.00 0.00 0.00 2.77
2240 2705 2.260869 CGCTGTGTCCACCCAAAGG 61.261 63.158 0.00 0.00 40.04 3.11
2241 2706 1.150536 GCTGTGTCCACCCAAAGGA 59.849 57.895 0.00 0.00 36.73 3.36
2248 2713 0.698238 TCCACCCAAAGGACATCAGG 59.302 55.000 0.00 0.00 36.73 3.86
2249 2714 0.698238 CCACCCAAAGGACATCAGGA 59.302 55.000 0.00 0.00 36.73 3.86
2250 2715 1.614317 CCACCCAAAGGACATCAGGAC 60.614 57.143 0.00 0.00 36.73 3.85
2251 2716 1.352352 CACCCAAAGGACATCAGGACT 59.648 52.381 0.00 0.00 36.73 3.85
2252 2717 1.352352 ACCCAAAGGACATCAGGACTG 59.648 52.381 0.00 0.00 36.73 3.51
2253 2718 1.352352 CCCAAAGGACATCAGGACTGT 59.648 52.381 0.00 0.00 33.47 3.55
2254 2719 2.224867 CCCAAAGGACATCAGGACTGTT 60.225 50.000 0.00 0.00 33.47 3.16
2255 2720 3.009033 CCCAAAGGACATCAGGACTGTTA 59.991 47.826 0.00 0.00 33.47 2.41
2256 2721 4.256920 CCAAAGGACATCAGGACTGTTAG 58.743 47.826 0.00 0.00 0.00 2.34
2257 2722 4.020218 CCAAAGGACATCAGGACTGTTAGA 60.020 45.833 0.00 0.00 0.00 2.10
2258 2723 5.513094 CCAAAGGACATCAGGACTGTTAGAA 60.513 44.000 0.00 0.00 0.00 2.10
2259 2724 4.810191 AGGACATCAGGACTGTTAGAAC 57.190 45.455 0.00 0.00 0.00 3.01
2260 2725 4.160329 AGGACATCAGGACTGTTAGAACA 58.840 43.478 0.00 0.00 37.37 3.18
2280 2745 4.778842 CAGTCGCAATATCACTGTAACC 57.221 45.455 0.00 0.00 34.08 2.85
2286 2751 4.270084 CGCAATATCACTGTAACCGACATT 59.730 41.667 0.00 0.00 37.45 2.71
2287 2752 5.501715 GCAATATCACTGTAACCGACATTG 58.498 41.667 0.00 0.00 39.48 2.82
2288 2753 5.064707 GCAATATCACTGTAACCGACATTGT 59.935 40.000 0.00 0.00 39.23 2.71
2289 2754 6.256975 GCAATATCACTGTAACCGACATTGTA 59.743 38.462 0.00 0.00 39.23 2.41
2290 2755 7.201574 GCAATATCACTGTAACCGACATTGTAA 60.202 37.037 0.00 0.00 39.23 2.41
2294 2760 1.727880 TGTAACCGACATTGTAAGCGC 59.272 47.619 0.00 0.00 31.20 5.92
2321 2787 2.820059 GGCAATATAAAAGCCCAGGC 57.180 50.000 0.00 0.00 42.58 4.85
2322 2788 2.038659 GGCAATATAAAAGCCCAGGCA 58.961 47.619 12.03 0.00 44.88 4.75
2323 2789 2.634453 GGCAATATAAAAGCCCAGGCAT 59.366 45.455 12.03 0.00 44.88 4.40
2324 2790 3.306294 GGCAATATAAAAGCCCAGGCATC 60.306 47.826 12.03 0.00 44.88 3.91
2325 2791 3.306294 GCAATATAAAAGCCCAGGCATCC 60.306 47.826 12.03 0.00 44.88 3.51
2326 2792 2.270352 TATAAAAGCCCAGGCATCCG 57.730 50.000 12.03 0.00 44.88 4.18
2333 2799 0.036732 GCCCAGGCATCCGATCAATA 59.963 55.000 3.12 0.00 41.49 1.90
2334 2800 1.813513 CCCAGGCATCCGATCAATAC 58.186 55.000 0.00 0.00 0.00 1.89
2336 2802 2.420642 CCAGGCATCCGATCAATACAG 58.579 52.381 0.00 0.00 0.00 2.74
2337 2803 2.037641 CCAGGCATCCGATCAATACAGA 59.962 50.000 0.00 0.00 0.00 3.41
2338 2804 3.307269 CCAGGCATCCGATCAATACAGAT 60.307 47.826 0.00 0.00 0.00 2.90
2340 2806 5.482006 CAGGCATCCGATCAATACAGATAA 58.518 41.667 0.00 0.00 0.00 1.75
2341 2807 5.349817 CAGGCATCCGATCAATACAGATAAC 59.650 44.000 0.00 0.00 0.00 1.89
2342 2808 5.247110 AGGCATCCGATCAATACAGATAACT 59.753 40.000 0.00 0.00 0.00 2.24
2343 2809 6.437477 AGGCATCCGATCAATACAGATAACTA 59.563 38.462 0.00 0.00 0.00 2.24
2380 2847 5.883115 TCTCTGACTCTCTTCACGTTATCAT 59.117 40.000 0.00 0.00 0.00 2.45
2434 2901 3.367600 GGAGAGAACGGAGAAGAAAGGTC 60.368 52.174 0.00 0.00 0.00 3.85
2440 2907 4.417426 ACGGAGAAGAAAGGTCAGAAAA 57.583 40.909 0.00 0.00 0.00 2.29
2462 2929 3.619419 TGATGATTTTCTTGCCGGATGA 58.381 40.909 5.05 0.00 0.00 2.92
2479 2950 1.442769 TGATGCTTGTTCCTTCGCTC 58.557 50.000 0.00 0.00 0.00 5.03
2480 2951 0.371645 GATGCTTGTTCCTTCGCTCG 59.628 55.000 0.00 0.00 0.00 5.03
2483 2954 1.228657 GCTTGTTCCTTCGCTCGGTT 61.229 55.000 0.00 0.00 0.00 4.44
2484 2955 1.226746 CTTGTTCCTTCGCTCGGTTT 58.773 50.000 0.00 0.00 0.00 3.27
2485 2956 0.941542 TTGTTCCTTCGCTCGGTTTG 59.058 50.000 0.00 0.00 0.00 2.93
2486 2957 0.179067 TGTTCCTTCGCTCGGTTTGT 60.179 50.000 0.00 0.00 0.00 2.83
2487 2958 0.234884 GTTCCTTCGCTCGGTTTGTG 59.765 55.000 0.00 0.00 0.00 3.33
2488 2959 0.882927 TTCCTTCGCTCGGTTTGTGG 60.883 55.000 0.00 0.00 0.00 4.17
2489 2960 2.556287 CTTCGCTCGGTTTGTGGC 59.444 61.111 0.00 0.00 0.00 5.01
2490 2961 2.966309 CTTCGCTCGGTTTGTGGCC 61.966 63.158 0.00 0.00 0.00 5.36
2491 2962 3.758973 TTCGCTCGGTTTGTGGCCA 62.759 57.895 0.00 0.00 0.00 5.36
2523 2994 0.245539 CCGGCACTCTCGTTTTCCTA 59.754 55.000 0.00 0.00 0.00 2.94
2725 3197 2.029815 TGCAGCGCCGAAACTACA 59.970 55.556 2.29 0.00 0.00 2.74
2747 3219 1.602771 GAGCCCCTGGACCAAGTAC 59.397 63.158 0.00 0.00 0.00 2.73
2753 3225 1.299976 CTGGACCAAGTACCAGGGC 59.700 63.158 0.00 2.50 46.76 5.19
2755 3227 2.267961 GACCAAGTACCAGGGCCG 59.732 66.667 0.00 0.00 0.00 6.13
2756 3228 3.971109 GACCAAGTACCAGGGCCGC 62.971 68.421 0.00 0.00 0.00 6.53
2757 3229 3.717294 CCAAGTACCAGGGCCGCT 61.717 66.667 0.00 0.00 0.00 5.52
2758 3230 2.436646 CAAGTACCAGGGCCGCTG 60.437 66.667 12.83 12.83 0.00 5.18
2759 3231 2.928396 AAGTACCAGGGCCGCTGT 60.928 61.111 16.96 7.52 0.00 4.40
2760 3232 3.254024 AAGTACCAGGGCCGCTGTG 62.254 63.158 16.96 11.95 0.00 3.66
2807 3279 4.595538 TTCCGCAGTGCCGAACGT 62.596 61.111 13.87 0.00 0.00 3.99
2868 3340 0.689623 CCTCTGCCTCCAACTTCAGT 59.310 55.000 0.00 0.00 0.00 3.41
2870 3342 1.071385 CTCTGCCTCCAACTTCAGTGT 59.929 52.381 0.00 0.00 0.00 3.55
2879 3351 3.414700 CTTCAGTGTGGACGCCGC 61.415 66.667 2.92 2.92 34.12 6.53
2906 3378 2.439156 GCCGCTGCCTCCTGAATT 60.439 61.111 0.00 0.00 0.00 2.17
2907 3379 2.048603 GCCGCTGCCTCCTGAATTT 61.049 57.895 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.366052 TTACCATTTCTTCCTCCAGCC 57.634 47.619 0.00 0.00 0.00 4.85
80 81 0.960364 ACATTCCCGCAACGCAGAAT 60.960 50.000 0.00 0.00 31.82 2.40
174 176 4.878397 CGAGCCCAGTCAAAGATTTAAGAT 59.122 41.667 0.00 0.00 0.00 2.40
179 181 2.568623 ACGAGCCCAGTCAAAGATTT 57.431 45.000 0.00 0.00 0.00 2.17
218 221 0.110486 AACCACAGGTTGATTCGCCT 59.890 50.000 0.00 0.00 45.07 5.52
219 222 2.641197 AACCACAGGTTGATTCGCC 58.359 52.632 0.00 0.00 45.07 5.54
228 231 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
229 232 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
230 233 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
231 234 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
232 235 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
233 236 2.352561 TCCCTCTAACCATCCAACCA 57.647 50.000 0.00 0.00 0.00 3.67
234 237 3.053619 ACAATCCCTCTAACCATCCAACC 60.054 47.826 0.00 0.00 0.00 3.77
235 238 3.947834 CACAATCCCTCTAACCATCCAAC 59.052 47.826 0.00 0.00 0.00 3.77
236 239 3.053693 CCACAATCCCTCTAACCATCCAA 60.054 47.826 0.00 0.00 0.00 3.53
237 240 2.509548 CCACAATCCCTCTAACCATCCA 59.490 50.000 0.00 0.00 0.00 3.41
238 241 2.509964 ACCACAATCCCTCTAACCATCC 59.490 50.000 0.00 0.00 0.00 3.51
239 242 3.933861 ACCACAATCCCTCTAACCATC 57.066 47.619 0.00 0.00 0.00 3.51
240 243 4.351111 GGATACCACAATCCCTCTAACCAT 59.649 45.833 0.00 0.00 39.74 3.55
241 244 3.714798 GGATACCACAATCCCTCTAACCA 59.285 47.826 0.00 0.00 39.74 3.67
242 245 4.353383 GGATACCACAATCCCTCTAACC 57.647 50.000 0.00 0.00 39.74 2.85
258 261 1.692749 TCTGGTGGGCTGGGGATAC 60.693 63.158 0.00 0.00 0.00 2.24
259 262 1.384502 CTCTGGTGGGCTGGGGATA 60.385 63.158 0.00 0.00 0.00 2.59
260 263 2.693864 CTCTGGTGGGCTGGGGAT 60.694 66.667 0.00 0.00 0.00 3.85
261 264 3.810687 AACTCTGGTGGGCTGGGGA 62.811 63.158 0.00 0.00 0.00 4.81
262 265 3.260100 AACTCTGGTGGGCTGGGG 61.260 66.667 0.00 0.00 0.00 4.96
263 266 2.067932 TTGAACTCTGGTGGGCTGGG 62.068 60.000 0.00 0.00 0.00 4.45
264 267 0.178992 TTTGAACTCTGGTGGGCTGG 60.179 55.000 0.00 0.00 0.00 4.85
265 268 1.815003 GATTTGAACTCTGGTGGGCTG 59.185 52.381 0.00 0.00 0.00 4.85
266 269 1.272147 GGATTTGAACTCTGGTGGGCT 60.272 52.381 0.00 0.00 0.00 5.19
267 270 1.177401 GGATTTGAACTCTGGTGGGC 58.823 55.000 0.00 0.00 0.00 5.36
268 271 2.440409 CAGGATTTGAACTCTGGTGGG 58.560 52.381 0.00 0.00 0.00 4.61
269 272 2.440409 CCAGGATTTGAACTCTGGTGG 58.560 52.381 0.00 0.00 41.21 4.61
273 276 2.746362 GAGCACCAGGATTTGAACTCTG 59.254 50.000 0.00 0.00 0.00 3.35
274 277 2.613977 CGAGCACCAGGATTTGAACTCT 60.614 50.000 0.00 0.00 0.00 3.24
275 278 1.734465 CGAGCACCAGGATTTGAACTC 59.266 52.381 0.00 0.00 0.00 3.01
276 279 1.813513 CGAGCACCAGGATTTGAACT 58.186 50.000 0.00 0.00 0.00 3.01
277 280 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
278 281 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
279 282 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
280 283 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
281 284 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
282 285 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
283 286 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
284 287 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
285 288 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
286 289 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
287 290 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
288 291 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
289 292 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
290 293 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
291 294 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
292 295 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
293 296 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
294 297 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
304 307 4.576463 CGGAACTCCTGAAATAAATCCAGG 59.424 45.833 0.00 0.00 46.64 4.45
305 308 4.576463 CCGGAACTCCTGAAATAAATCCAG 59.424 45.833 0.00 0.00 0.00 3.86
306 309 4.523083 CCGGAACTCCTGAAATAAATCCA 58.477 43.478 0.00 0.00 0.00 3.41
307 310 3.315470 GCCGGAACTCCTGAAATAAATCC 59.685 47.826 5.05 0.00 0.00 3.01
308 311 3.002348 CGCCGGAACTCCTGAAATAAATC 59.998 47.826 5.05 0.00 0.00 2.17
309 312 2.943033 CGCCGGAACTCCTGAAATAAAT 59.057 45.455 5.05 0.00 0.00 1.40
310 313 2.027929 TCGCCGGAACTCCTGAAATAAA 60.028 45.455 5.05 0.00 0.00 1.40
311 314 1.551430 TCGCCGGAACTCCTGAAATAA 59.449 47.619 5.05 0.00 0.00 1.40
312 315 1.187974 TCGCCGGAACTCCTGAAATA 58.812 50.000 5.05 0.00 0.00 1.40
313 316 0.541863 ATCGCCGGAACTCCTGAAAT 59.458 50.000 5.05 0.00 0.00 2.17
314 317 0.391130 CATCGCCGGAACTCCTGAAA 60.391 55.000 5.05 0.00 0.00 2.69
315 318 1.218047 CATCGCCGGAACTCCTGAA 59.782 57.895 5.05 0.00 0.00 3.02
316 319 2.892640 CATCGCCGGAACTCCTGA 59.107 61.111 5.05 0.00 0.00 3.86
317 320 2.892425 GCATCGCCGGAACTCCTG 60.892 66.667 5.05 0.00 0.00 3.86
318 321 4.514577 CGCATCGCCGGAACTCCT 62.515 66.667 5.05 0.00 0.00 3.69
329 332 3.853330 CCCACTGAACGCGCATCG 61.853 66.667 5.73 4.51 45.38 3.84
330 333 2.434185 TCCCACTGAACGCGCATC 60.434 61.111 5.73 5.66 0.00 3.91
331 334 2.434884 CTCCCACTGAACGCGCAT 60.435 61.111 5.73 0.00 0.00 4.73
332 335 4.680237 CCTCCCACTGAACGCGCA 62.680 66.667 5.73 0.00 0.00 6.09
333 336 4.373116 TCCTCCCACTGAACGCGC 62.373 66.667 5.73 0.00 0.00 6.86
334 337 2.125912 CTCCTCCCACTGAACGCG 60.126 66.667 3.53 3.53 0.00 6.01
335 338 1.079750 GTCTCCTCCCACTGAACGC 60.080 63.158 0.00 0.00 0.00 4.84
336 339 1.213013 CGTCTCCTCCCACTGAACG 59.787 63.158 0.00 0.00 0.00 3.95
337 340 0.680061 AACGTCTCCTCCCACTGAAC 59.320 55.000 0.00 0.00 0.00 3.18
338 341 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
339 342 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
340 343 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
341 344 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
360 363 2.393768 TAGGCACCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
361 364 2.046988 TAGGCACCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
362 365 2.099831 GTAGGCACCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
363 366 2.099831 CGTAGGCACCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
364 367 3.437795 CCGTAGGCACCTCGTCGT 61.438 66.667 0.00 0.00 46.14 4.34
376 379 6.309494 TCATGAAATTTACGAAGTCACCGTAG 59.691 38.462 0.00 0.00 43.93 3.51
377 380 6.157904 TCATGAAATTTACGAAGTCACCGTA 58.842 36.000 0.00 0.00 43.93 4.02
378 381 4.992319 TCATGAAATTTACGAAGTCACCGT 59.008 37.500 0.00 0.00 43.93 4.83
379 382 5.524511 TCATGAAATTTACGAAGTCACCG 57.475 39.130 0.00 0.00 43.93 4.94
380 383 7.072177 TCATCATGAAATTTACGAAGTCACC 57.928 36.000 0.00 0.00 43.93 4.02
383 386 9.322776 GCATATCATCATGAAATTTACGAAGTC 57.677 33.333 0.00 0.00 43.93 3.01
385 388 9.326339 CTGCATATCATCATGAAATTTACGAAG 57.674 33.333 0.00 0.00 0.00 3.79
386 389 8.291740 CCTGCATATCATCATGAAATTTACGAA 58.708 33.333 0.00 0.00 0.00 3.85
387 390 7.573656 GCCTGCATATCATCATGAAATTTACGA 60.574 37.037 0.00 0.00 0.00 3.43
388 391 6.525628 GCCTGCATATCATCATGAAATTTACG 59.474 38.462 0.00 0.00 0.00 3.18
389 392 7.600065 AGCCTGCATATCATCATGAAATTTAC 58.400 34.615 0.00 0.00 0.00 2.01
390 393 7.449086 TGAGCCTGCATATCATCATGAAATTTA 59.551 33.333 0.00 0.00 0.00 1.40
391 394 6.266786 TGAGCCTGCATATCATCATGAAATTT 59.733 34.615 0.00 0.00 0.00 1.82
392 395 5.773176 TGAGCCTGCATATCATCATGAAATT 59.227 36.000 0.00 0.00 0.00 1.82
393 396 5.321927 TGAGCCTGCATATCATCATGAAAT 58.678 37.500 0.00 0.00 0.00 2.17
394 397 4.721132 TGAGCCTGCATATCATCATGAAA 58.279 39.130 0.00 0.00 0.00 2.69
395 398 4.202430 ACTGAGCCTGCATATCATCATGAA 60.202 41.667 0.00 0.00 0.00 2.57
396 399 3.326880 ACTGAGCCTGCATATCATCATGA 59.673 43.478 0.00 0.00 0.00 3.07
397 400 3.676093 ACTGAGCCTGCATATCATCATG 58.324 45.455 0.00 0.00 0.00 3.07
398 401 3.583526 AGACTGAGCCTGCATATCATCAT 59.416 43.478 0.00 0.00 0.00 2.45
399 402 2.970640 AGACTGAGCCTGCATATCATCA 59.029 45.455 0.00 0.00 0.00 3.07
400 403 3.681593 AGACTGAGCCTGCATATCATC 57.318 47.619 0.00 0.00 0.00 2.92
401 404 4.387598 GAAAGACTGAGCCTGCATATCAT 58.612 43.478 0.00 0.00 0.00 2.45
402 405 3.739209 CGAAAGACTGAGCCTGCATATCA 60.739 47.826 0.00 0.00 0.00 2.15
403 406 2.799412 CGAAAGACTGAGCCTGCATATC 59.201 50.000 0.00 0.00 0.00 1.63
404 407 2.432146 TCGAAAGACTGAGCCTGCATAT 59.568 45.455 0.00 0.00 33.31 1.78
405 408 1.824852 TCGAAAGACTGAGCCTGCATA 59.175 47.619 0.00 0.00 33.31 3.14
406 409 0.610174 TCGAAAGACTGAGCCTGCAT 59.390 50.000 0.00 0.00 33.31 3.96
407 410 0.392706 TTCGAAAGACTGAGCCTGCA 59.607 50.000 0.00 0.00 41.84 4.41
408 411 1.074752 CTTCGAAAGACTGAGCCTGC 58.925 55.000 0.00 0.00 41.84 4.85
409 412 1.001406 ACCTTCGAAAGACTGAGCCTG 59.999 52.381 0.00 0.00 41.84 4.85
410 413 1.001406 CACCTTCGAAAGACTGAGCCT 59.999 52.381 0.00 0.00 41.84 4.58
411 414 1.433534 CACCTTCGAAAGACTGAGCC 58.566 55.000 0.00 0.00 41.84 4.70
412 415 0.793250 GCACCTTCGAAAGACTGAGC 59.207 55.000 0.00 0.00 41.84 4.26
413 416 2.447244 AGCACCTTCGAAAGACTGAG 57.553 50.000 0.00 0.00 41.84 3.35
414 417 2.910688 AAGCACCTTCGAAAGACTGA 57.089 45.000 0.00 0.00 41.84 3.41
415 418 4.806247 CCTATAAGCACCTTCGAAAGACTG 59.194 45.833 0.00 0.00 41.84 3.51
416 419 4.141914 CCCTATAAGCACCTTCGAAAGACT 60.142 45.833 0.00 0.00 41.84 3.24
417 420 4.120589 CCCTATAAGCACCTTCGAAAGAC 58.879 47.826 0.00 0.00 41.84 3.01
418 421 3.134081 CCCCTATAAGCACCTTCGAAAGA 59.866 47.826 0.00 0.00 39.20 2.52
419 422 3.118371 ACCCCTATAAGCACCTTCGAAAG 60.118 47.826 0.00 0.00 0.00 2.62
420 423 2.841881 ACCCCTATAAGCACCTTCGAAA 59.158 45.455 0.00 0.00 0.00 3.46
421 424 2.474112 ACCCCTATAAGCACCTTCGAA 58.526 47.619 0.00 0.00 0.00 3.71
422 425 2.170012 ACCCCTATAAGCACCTTCGA 57.830 50.000 0.00 0.00 0.00 3.71
423 426 2.299297 CCTACCCCTATAAGCACCTTCG 59.701 54.545 0.00 0.00 0.00 3.79
424 427 2.638363 CCCTACCCCTATAAGCACCTTC 59.362 54.545 0.00 0.00 0.00 3.46
425 428 2.021341 ACCCTACCCCTATAAGCACCTT 60.021 50.000 0.00 0.00 0.00 3.50
426 429 1.584105 ACCCTACCCCTATAAGCACCT 59.416 52.381 0.00 0.00 0.00 4.00
427 430 1.697982 CACCCTACCCCTATAAGCACC 59.302 57.143 0.00 0.00 0.00 5.01
428 431 2.104281 CACACCCTACCCCTATAAGCAC 59.896 54.545 0.00 0.00 0.00 4.40
429 432 2.404559 CACACCCTACCCCTATAAGCA 58.595 52.381 0.00 0.00 0.00 3.91
430 433 1.071857 GCACACCCTACCCCTATAAGC 59.928 57.143 0.00 0.00 0.00 3.09
431 434 1.343465 CGCACACCCTACCCCTATAAG 59.657 57.143 0.00 0.00 0.00 1.73
432 435 1.343277 ACGCACACCCTACCCCTATAA 60.343 52.381 0.00 0.00 0.00 0.98
433 436 0.262580 ACGCACACCCTACCCCTATA 59.737 55.000 0.00 0.00 0.00 1.31
434 437 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
435 438 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
436 439 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
437 440 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
438 441 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
439 442 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
440 443 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
441 444 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
444 447 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
445 448 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
446 449 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
447 450 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
448 451 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
449 452 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
450 453 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
451 454 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
452 455 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
453 456 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
454 457 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
455 458 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
456 459 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
457 460 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
458 461 6.150318 GTGTATACACTCATCCCTATGAACG 58.850 44.000 25.56 0.00 41.57 3.95
459 462 6.150318 CGTGTATACACTCATCCCTATGAAC 58.850 44.000 28.53 2.31 44.34 3.18
460 463 5.831525 ACGTGTATACACTCATCCCTATGAA 59.168 40.000 28.53 0.00 44.34 2.57
461 464 5.382616 ACGTGTATACACTCATCCCTATGA 58.617 41.667 28.53 0.00 44.34 2.15
462 465 5.707242 ACGTGTATACACTCATCCCTATG 57.293 43.478 28.53 14.32 44.34 2.23
465 468 9.121658 CATATATACGTGTATACACTCATCCCT 57.878 37.037 28.53 12.77 44.34 4.20
466 469 9.117183 TCATATATACGTGTATACACTCATCCC 57.883 37.037 28.53 5.97 44.34 3.85
468 471 9.653067 GCTCATATATACGTGTATACACTCATC 57.347 37.037 28.53 7.31 44.34 2.92
469 472 8.336080 CGCTCATATATACGTGTATACACTCAT 58.664 37.037 28.53 22.66 44.34 2.90
470 473 7.675637 GCGCTCATATATACGTGTATACACTCA 60.676 40.741 28.53 18.36 44.34 3.41
471 474 6.628065 GCGCTCATATATACGTGTATACACTC 59.372 42.308 28.53 8.68 44.34 3.51
472 475 6.315642 AGCGCTCATATATACGTGTATACACT 59.684 38.462 28.53 19.29 44.34 3.55
473 476 6.484540 AGCGCTCATATATACGTGTATACAC 58.515 40.000 23.53 23.53 43.15 2.90
474 477 6.673154 AGCGCTCATATATACGTGTATACA 57.327 37.500 13.46 0.08 31.52 2.29
475 478 6.075519 GCAAGCGCTCATATATACGTGTATAC 60.076 42.308 12.06 0.00 31.22 1.47
476 479 5.969435 GCAAGCGCTCATATATACGTGTATA 59.031 40.000 12.06 13.54 34.30 1.47
477 480 4.798907 GCAAGCGCTCATATATACGTGTAT 59.201 41.667 12.06 9.87 34.30 2.29
478 481 4.163552 GCAAGCGCTCATATATACGTGTA 58.836 43.478 12.06 0.00 34.30 2.90
479 482 2.987149 GCAAGCGCTCATATATACGTGT 59.013 45.455 12.06 0.00 34.30 4.49
480 483 2.026860 CGCAAGCGCTCATATATACGTG 59.973 50.000 12.06 1.45 35.30 4.49
481 484 2.251040 CGCAAGCGCTCATATATACGT 58.749 47.619 12.06 0.00 35.30 3.57
482 485 2.251040 ACGCAAGCGCTCATATATACG 58.749 47.619 12.06 2.40 44.19 3.06
483 486 3.301906 CAGACGCAAGCGCTCATATATAC 59.698 47.826 12.06 0.00 44.19 1.47
484 487 3.057526 ACAGACGCAAGCGCTCATATATA 60.058 43.478 12.06 0.00 44.19 0.86
485 488 2.288457 ACAGACGCAAGCGCTCATATAT 60.288 45.455 12.06 0.00 44.19 0.86
486 489 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
487 490 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
488 491 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
489 492 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
490 493 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
491 494 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
492 495 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
493 496 1.078759 ATCAGTACAGACGCAAGCGC 61.079 55.000 15.09 0.00 44.19 5.92
494 497 0.642291 CATCAGTACAGACGCAAGCG 59.358 55.000 13.50 13.50 46.03 4.68
495 498 1.714794 ACATCAGTACAGACGCAAGC 58.285 50.000 0.00 0.00 45.62 4.01
497 500 2.416836 GGCTACATCAGTACAGACGCAA 60.417 50.000 0.00 0.00 0.00 4.85
498 501 1.134367 GGCTACATCAGTACAGACGCA 59.866 52.381 0.00 0.00 0.00 5.24
499 502 1.134367 TGGCTACATCAGTACAGACGC 59.866 52.381 0.00 0.00 0.00 5.19
500 503 3.119459 AGTTGGCTACATCAGTACAGACG 60.119 47.826 1.24 0.00 0.00 4.18
501 504 4.457834 AGTTGGCTACATCAGTACAGAC 57.542 45.455 1.24 0.00 0.00 3.51
502 505 4.526650 TGAAGTTGGCTACATCAGTACAGA 59.473 41.667 2.99 0.00 31.32 3.41
503 506 4.820897 TGAAGTTGGCTACATCAGTACAG 58.179 43.478 2.99 0.00 31.32 2.74
504 507 4.882842 TGAAGTTGGCTACATCAGTACA 57.117 40.909 2.99 0.00 31.32 2.90
505 508 4.392138 GGTTGAAGTTGGCTACATCAGTAC 59.608 45.833 7.05 4.37 36.01 2.73
506 509 4.041075 TGGTTGAAGTTGGCTACATCAGTA 59.959 41.667 7.05 0.00 36.01 2.74
507 510 3.181445 TGGTTGAAGTTGGCTACATCAGT 60.181 43.478 7.05 0.00 36.01 3.41
508 511 3.411446 TGGTTGAAGTTGGCTACATCAG 58.589 45.455 7.05 0.00 36.01 2.90
509 512 3.411446 CTGGTTGAAGTTGGCTACATCA 58.589 45.455 2.99 2.99 32.96 3.07
510 513 2.749621 CCTGGTTGAAGTTGGCTACATC 59.250 50.000 1.24 0.00 0.00 3.06
511 514 2.375174 TCCTGGTTGAAGTTGGCTACAT 59.625 45.455 1.24 0.00 0.00 2.29
512 515 1.771854 TCCTGGTTGAAGTTGGCTACA 59.228 47.619 1.24 0.00 0.00 2.74
513 516 2.427506 CTCCTGGTTGAAGTTGGCTAC 58.572 52.381 0.00 0.00 0.00 3.58
514 517 1.271379 GCTCCTGGTTGAAGTTGGCTA 60.271 52.381 0.00 0.00 0.00 3.93
515 518 0.538287 GCTCCTGGTTGAAGTTGGCT 60.538 55.000 0.00 0.00 0.00 4.75
516 519 0.538287 AGCTCCTGGTTGAAGTTGGC 60.538 55.000 0.00 0.00 0.00 4.52
517 520 2.859165 TAGCTCCTGGTTGAAGTTGG 57.141 50.000 0.00 0.00 0.00 3.77
518 521 3.679389 ACATAGCTCCTGGTTGAAGTTG 58.321 45.455 0.00 0.00 0.00 3.16
590 969 2.787601 CATGCATGAACATGTAGGCC 57.212 50.000 22.59 0.00 42.05 5.19
760 1152 3.521560 ACGTGCATGACTGTTATCGATT 58.478 40.909 14.17 0.00 0.00 3.34
792 1214 4.436317 CGACTTTTCAGGACGAACAAACAA 60.436 41.667 0.00 0.00 31.73 2.83
798 1220 1.456165 GCTCGACTTTTCAGGACGAAC 59.544 52.381 0.00 0.00 34.31 3.95
802 1224 1.673329 GGGAGCTCGACTTTTCAGGAC 60.673 57.143 7.83 0.00 0.00 3.85
880 1309 1.070445 AGCTCACAGATAGATGCAGCC 59.930 52.381 0.00 0.00 0.00 4.85
941 1374 3.437049 GTGATGGTGTAGGAACTTGAAGC 59.563 47.826 0.00 0.00 41.75 3.86
1315 1757 1.381463 GGAGGGAGTAGCCGTTCCT 60.381 63.158 0.00 0.00 37.82 3.36
1724 2169 3.000819 CGAGGCCCAGGTACACCA 61.001 66.667 0.00 0.00 38.89 4.17
1928 2373 4.308899 ACACTCTGAACCAGCGATATAC 57.691 45.455 0.00 0.00 0.00 1.47
1942 2391 8.283992 GCATACACAGTAGTAGTATACACTCTG 58.716 40.741 5.50 15.10 46.26 3.35
2010 2475 6.169094 CAACTTCAGTTCACATCCATAGAGT 58.831 40.000 0.00 0.00 35.83 3.24
2011 2476 6.169094 ACAACTTCAGTTCACATCCATAGAG 58.831 40.000 0.00 0.00 35.83 2.43
2012 2477 6.114187 ACAACTTCAGTTCACATCCATAGA 57.886 37.500 0.00 0.00 35.83 1.98
2013 2478 6.808008 AACAACTTCAGTTCACATCCATAG 57.192 37.500 0.00 0.00 35.83 2.23
2014 2479 6.545666 ACAAACAACTTCAGTTCACATCCATA 59.454 34.615 0.00 0.00 35.83 2.74
2015 2480 5.360714 ACAAACAACTTCAGTTCACATCCAT 59.639 36.000 0.00 0.00 35.83 3.41
2016 2481 4.704540 ACAAACAACTTCAGTTCACATCCA 59.295 37.500 0.00 0.00 35.83 3.41
2067 2532 9.323985 GCTTCATTGTCTTGAGAGTCTTTATAT 57.676 33.333 0.00 0.00 0.00 0.86
2068 2533 8.535335 AGCTTCATTGTCTTGAGAGTCTTTATA 58.465 33.333 0.00 0.00 0.00 0.98
2069 2534 7.393216 AGCTTCATTGTCTTGAGAGTCTTTAT 58.607 34.615 0.00 0.00 0.00 1.40
2070 2535 6.763355 AGCTTCATTGTCTTGAGAGTCTTTA 58.237 36.000 0.00 0.00 0.00 1.85
2071 2536 5.619220 AGCTTCATTGTCTTGAGAGTCTTT 58.381 37.500 0.00 0.00 0.00 2.52
2072 2537 5.226194 AGCTTCATTGTCTTGAGAGTCTT 57.774 39.130 0.00 0.00 0.00 3.01
2073 2538 4.888326 AGCTTCATTGTCTTGAGAGTCT 57.112 40.909 0.00 0.00 0.00 3.24
2074 2539 4.153835 CCAAGCTTCATTGTCTTGAGAGTC 59.846 45.833 0.00 0.00 39.48 3.36
2075 2540 4.070716 CCAAGCTTCATTGTCTTGAGAGT 58.929 43.478 0.00 0.00 39.48 3.24
2076 2541 4.321718 TCCAAGCTTCATTGTCTTGAGAG 58.678 43.478 0.00 0.00 39.48 3.20
2077 2542 4.356405 TCCAAGCTTCATTGTCTTGAGA 57.644 40.909 0.00 8.79 39.48 3.27
2078 2543 5.640189 ATTCCAAGCTTCATTGTCTTGAG 57.360 39.130 0.00 7.38 39.48 3.02
2079 2544 6.003326 TGTATTCCAAGCTTCATTGTCTTGA 58.997 36.000 0.00 0.00 39.48 3.02
2080 2545 6.258230 TGTATTCCAAGCTTCATTGTCTTG 57.742 37.500 0.00 0.00 37.52 3.02
2081 2546 5.105997 GCTGTATTCCAAGCTTCATTGTCTT 60.106 40.000 0.00 0.00 0.00 3.01
2082 2547 4.397417 GCTGTATTCCAAGCTTCATTGTCT 59.603 41.667 0.00 0.00 0.00 3.41
2083 2548 4.156556 TGCTGTATTCCAAGCTTCATTGTC 59.843 41.667 0.00 0.00 0.00 3.18
2084 2549 4.081406 TGCTGTATTCCAAGCTTCATTGT 58.919 39.130 0.00 0.00 0.00 2.71
2085 2550 4.707030 TGCTGTATTCCAAGCTTCATTG 57.293 40.909 0.00 0.00 0.00 2.82
2086 2551 5.186409 ACAATGCTGTATTCCAAGCTTCATT 59.814 36.000 0.00 0.00 32.54 2.57
2087 2552 4.708421 ACAATGCTGTATTCCAAGCTTCAT 59.292 37.500 0.00 0.00 32.54 2.57
2088 2553 4.081406 ACAATGCTGTATTCCAAGCTTCA 58.919 39.130 0.00 0.00 32.54 3.02
2089 2554 4.439289 GGACAATGCTGTATTCCAAGCTTC 60.439 45.833 0.00 0.00 35.30 3.86
2090 2555 3.445096 GGACAATGCTGTATTCCAAGCTT 59.555 43.478 0.00 0.00 35.30 3.74
2091 2556 3.019564 GGACAATGCTGTATTCCAAGCT 58.980 45.455 0.00 0.00 35.30 3.74
2092 2557 2.754552 TGGACAATGCTGTATTCCAAGC 59.245 45.455 0.00 0.00 35.30 4.01
2093 2558 4.142315 CCTTGGACAATGCTGTATTCCAAG 60.142 45.833 22.28 22.28 45.79 3.61
2094 2559 3.763360 CCTTGGACAATGCTGTATTCCAA 59.237 43.478 10.27 10.27 35.60 3.53
2095 2560 3.355378 CCTTGGACAATGCTGTATTCCA 58.645 45.455 0.00 0.00 35.30 3.53
2096 2561 2.689983 CCCTTGGACAATGCTGTATTCC 59.310 50.000 0.00 0.00 35.30 3.01
2097 2562 2.689983 CCCCTTGGACAATGCTGTATTC 59.310 50.000 0.00 0.00 35.30 1.75
2098 2563 2.624029 CCCCCTTGGACAATGCTGTATT 60.624 50.000 0.00 0.00 35.30 1.89
2099 2564 1.063717 CCCCCTTGGACAATGCTGTAT 60.064 52.381 0.00 0.00 35.30 2.29
2100 2565 0.331278 CCCCCTTGGACAATGCTGTA 59.669 55.000 0.00 0.00 35.30 2.74
2101 2566 1.077265 CCCCCTTGGACAATGCTGT 59.923 57.895 0.00 0.00 38.98 4.40
2102 2567 0.682209 CTCCCCCTTGGACAATGCTG 60.682 60.000 0.00 0.00 38.61 4.41
2103 2568 1.142688 ACTCCCCCTTGGACAATGCT 61.143 55.000 0.00 0.00 38.61 3.79
2104 2569 0.967380 CACTCCCCCTTGGACAATGC 60.967 60.000 0.00 0.00 38.61 3.56
2105 2570 0.405585 ACACTCCCCCTTGGACAATG 59.594 55.000 0.00 0.00 38.61 2.82
2106 2571 1.158007 AACACTCCCCCTTGGACAAT 58.842 50.000 0.00 0.00 38.61 2.71
2107 2572 1.702957 CTAACACTCCCCCTTGGACAA 59.297 52.381 0.00 0.00 38.61 3.18
2108 2573 1.132657 TCTAACACTCCCCCTTGGACA 60.133 52.381 0.00 0.00 38.61 4.02
2109 2574 1.555533 CTCTAACACTCCCCCTTGGAC 59.444 57.143 0.00 0.00 38.61 4.02
2110 2575 1.435563 TCTCTAACACTCCCCCTTGGA 59.564 52.381 0.00 0.00 42.41 3.53
2111 2576 1.555533 GTCTCTAACACTCCCCCTTGG 59.444 57.143 0.00 0.00 0.00 3.61
2112 2577 1.555533 GGTCTCTAACACTCCCCCTTG 59.444 57.143 0.00 0.00 0.00 3.61
2113 2578 1.151413 TGGTCTCTAACACTCCCCCTT 59.849 52.381 0.00 0.00 0.00 3.95
2114 2579 0.790993 TGGTCTCTAACACTCCCCCT 59.209 55.000 0.00 0.00 0.00 4.79
2115 2580 1.652947 TTGGTCTCTAACACTCCCCC 58.347 55.000 0.00 0.00 0.00 5.40
2116 2581 4.683671 GCTAATTGGTCTCTAACACTCCCC 60.684 50.000 0.00 0.00 0.00 4.81
2117 2582 4.081087 TGCTAATTGGTCTCTAACACTCCC 60.081 45.833 0.00 0.00 0.00 4.30
2118 2583 5.086104 TGCTAATTGGTCTCTAACACTCC 57.914 43.478 0.00 0.00 0.00 3.85
2119 2584 5.725362 ACTGCTAATTGGTCTCTAACACTC 58.275 41.667 0.00 0.00 0.00 3.51
2120 2585 5.746990 ACTGCTAATTGGTCTCTAACACT 57.253 39.130 0.00 0.00 0.00 3.55
2121 2586 7.097834 ACTAACTGCTAATTGGTCTCTAACAC 58.902 38.462 0.00 0.00 0.00 3.32
2122 2587 7.241042 ACTAACTGCTAATTGGTCTCTAACA 57.759 36.000 0.00 0.00 0.00 2.41
2123 2588 7.435784 GCTACTAACTGCTAATTGGTCTCTAAC 59.564 40.741 0.00 0.00 0.00 2.34
2124 2589 7.123697 TGCTACTAACTGCTAATTGGTCTCTAA 59.876 37.037 0.00 0.00 0.00 2.10
2125 2590 6.605995 TGCTACTAACTGCTAATTGGTCTCTA 59.394 38.462 0.00 0.00 0.00 2.43
2126 2591 5.422331 TGCTACTAACTGCTAATTGGTCTCT 59.578 40.000 0.00 0.00 0.00 3.10
2127 2592 5.661458 TGCTACTAACTGCTAATTGGTCTC 58.339 41.667 0.00 0.00 0.00 3.36
2128 2593 5.187967 ACTGCTACTAACTGCTAATTGGTCT 59.812 40.000 0.00 0.00 0.00 3.85
2129 2594 5.420409 ACTGCTACTAACTGCTAATTGGTC 58.580 41.667 0.00 0.00 0.00 4.02
2130 2595 5.422214 ACTGCTACTAACTGCTAATTGGT 57.578 39.130 0.00 0.00 0.00 3.67
2131 2596 7.333423 TGTTAACTGCTACTAACTGCTAATTGG 59.667 37.037 7.22 0.00 0.00 3.16
2132 2597 8.251750 TGTTAACTGCTACTAACTGCTAATTG 57.748 34.615 7.22 0.00 0.00 2.32
2133 2598 7.064728 GCTGTTAACTGCTACTAACTGCTAATT 59.935 37.037 25.17 0.00 43.76 1.40
2134 2599 6.535508 GCTGTTAACTGCTACTAACTGCTAAT 59.464 38.462 25.17 0.00 43.76 1.73
2135 2600 5.867716 GCTGTTAACTGCTACTAACTGCTAA 59.132 40.000 25.17 0.00 43.76 3.09
2136 2601 5.047590 TGCTGTTAACTGCTACTAACTGCTA 60.048 40.000 29.94 9.53 45.62 3.49
2137 2602 4.246458 GCTGTTAACTGCTACTAACTGCT 58.754 43.478 25.17 0.00 43.76 4.24
2138 2603 3.994392 TGCTGTTAACTGCTACTAACTGC 59.006 43.478 29.94 18.34 45.63 4.40
2139 2604 5.230942 ACTGCTGTTAACTGCTACTAACTG 58.769 41.667 29.94 15.64 40.79 3.16
2140 2605 5.470047 ACTGCTGTTAACTGCTACTAACT 57.530 39.130 29.94 8.77 40.79 2.24
2141 2606 6.183360 GCTAACTGCTGTTAACTGCTACTAAC 60.183 42.308 29.94 16.36 40.79 2.34
2142 2607 5.867716 GCTAACTGCTGTTAACTGCTACTAA 59.132 40.000 29.94 14.26 40.79 2.24
2143 2608 5.047590 TGCTAACTGCTGTTAACTGCTACTA 60.048 40.000 29.94 19.17 43.37 1.82
2144 2609 4.246458 GCTAACTGCTGTTAACTGCTACT 58.754 43.478 29.94 19.09 40.79 2.57
2145 2610 3.994392 TGCTAACTGCTGTTAACTGCTAC 59.006 43.478 29.94 16.80 43.37 3.58
2146 2611 4.265904 TGCTAACTGCTGTTAACTGCTA 57.734 40.909 29.94 18.79 43.37 3.49
2147 2612 3.126001 TGCTAACTGCTGTTAACTGCT 57.874 42.857 29.94 17.35 43.37 4.24
2148 2613 3.189287 ACATGCTAACTGCTGTTAACTGC 59.811 43.478 25.55 25.55 43.37 4.40
2149 2614 5.446473 GCTACATGCTAACTGCTGTTAACTG 60.446 44.000 15.86 14.42 43.37 3.16
2150 2615 4.631813 GCTACATGCTAACTGCTGTTAACT 59.368 41.667 15.86 2.86 43.37 2.24
2151 2616 4.492570 CGCTACATGCTAACTGCTGTTAAC 60.493 45.833 15.86 12.50 43.37 2.01
2152 2617 3.616821 CGCTACATGCTAACTGCTGTTAA 59.383 43.478 15.86 4.33 43.37 2.01
2153 2618 3.186909 CGCTACATGCTAACTGCTGTTA 58.813 45.455 14.55 14.55 43.37 2.41
2154 2619 2.002586 CGCTACATGCTAACTGCTGTT 58.997 47.619 13.80 13.80 43.37 3.16
2155 2620 1.066858 ACGCTACATGCTAACTGCTGT 60.067 47.619 0.00 0.00 43.37 4.40
2156 2621 1.645034 ACGCTACATGCTAACTGCTG 58.355 50.000 0.00 0.00 43.37 4.41
2157 2622 2.386661 AACGCTACATGCTAACTGCT 57.613 45.000 0.00 0.00 43.37 4.24
2158 2623 3.243177 GTCTAACGCTACATGCTAACTGC 59.757 47.826 0.00 0.00 40.11 4.40
2159 2624 4.421058 TGTCTAACGCTACATGCTAACTG 58.579 43.478 0.00 0.00 40.11 3.16
2160 2625 4.713824 TGTCTAACGCTACATGCTAACT 57.286 40.909 0.00 0.00 40.11 2.24
2161 2626 5.629849 CCTATGTCTAACGCTACATGCTAAC 59.370 44.000 0.00 0.00 36.96 2.34
2162 2627 5.769367 CCTATGTCTAACGCTACATGCTAA 58.231 41.667 0.00 0.00 36.96 3.09
2163 2628 4.321008 GCCTATGTCTAACGCTACATGCTA 60.321 45.833 0.00 0.00 36.96 3.49
2164 2629 3.553096 GCCTATGTCTAACGCTACATGCT 60.553 47.826 0.00 0.00 36.96 3.79
2165 2630 2.731976 GCCTATGTCTAACGCTACATGC 59.268 50.000 0.00 0.00 36.96 4.06
2166 2631 4.244425 AGCCTATGTCTAACGCTACATG 57.756 45.455 0.00 0.00 36.96 3.21
2167 2632 5.477291 ACATAGCCTATGTCTAACGCTACAT 59.523 40.000 11.60 0.00 45.83 2.29
2168 2633 4.825634 ACATAGCCTATGTCTAACGCTACA 59.174 41.667 11.60 0.00 45.83 2.74
2169 2634 5.373981 ACATAGCCTATGTCTAACGCTAC 57.626 43.478 11.60 0.00 45.83 3.58
2170 2635 5.646793 CCTACATAGCCTATGTCTAACGCTA 59.353 44.000 20.21 1.29 45.83 4.26
2171 2636 4.459685 CCTACATAGCCTATGTCTAACGCT 59.540 45.833 20.21 0.00 45.83 5.07
2172 2637 4.734917 CCTACATAGCCTATGTCTAACGC 58.265 47.826 20.21 0.00 45.83 4.84
2173 2638 4.217767 TGCCTACATAGCCTATGTCTAACG 59.782 45.833 20.21 6.45 45.83 3.18
2174 2639 5.244178 ACTGCCTACATAGCCTATGTCTAAC 59.756 44.000 20.21 9.70 45.83 2.34
2175 2640 5.394738 ACTGCCTACATAGCCTATGTCTAA 58.605 41.667 20.21 3.31 45.83 2.10
2176 2641 4.999310 ACTGCCTACATAGCCTATGTCTA 58.001 43.478 20.21 4.02 45.83 2.59
2177 2642 3.850752 ACTGCCTACATAGCCTATGTCT 58.149 45.455 20.21 0.42 45.83 3.41
2178 2643 4.608948 AACTGCCTACATAGCCTATGTC 57.391 45.455 20.21 7.74 45.83 3.06
2180 2645 5.853936 TGTTAACTGCCTACATAGCCTATG 58.146 41.667 10.19 10.19 41.88 2.23
2181 2646 6.494666 TTGTTAACTGCCTACATAGCCTAT 57.505 37.500 7.22 0.00 0.00 2.57
2182 2647 5.684030 GCTTGTTAACTGCCTACATAGCCTA 60.684 44.000 7.22 0.00 0.00 3.93
2183 2648 4.770795 CTTGTTAACTGCCTACATAGCCT 58.229 43.478 7.22 0.00 0.00 4.58
2184 2649 3.312697 GCTTGTTAACTGCCTACATAGCC 59.687 47.826 7.22 0.00 0.00 3.93
2185 2650 4.192317 AGCTTGTTAACTGCCTACATAGC 58.808 43.478 16.52 0.00 0.00 2.97
2186 2651 5.065218 CCAAGCTTGTTAACTGCCTACATAG 59.935 44.000 24.35 0.00 0.00 2.23
2187 2652 4.941263 CCAAGCTTGTTAACTGCCTACATA 59.059 41.667 24.35 0.00 0.00 2.29
2188 2653 3.758554 CCAAGCTTGTTAACTGCCTACAT 59.241 43.478 24.35 0.70 0.00 2.29
2189 2654 3.146066 CCAAGCTTGTTAACTGCCTACA 58.854 45.455 24.35 0.00 0.00 2.74
2190 2655 2.095212 GCCAAGCTTGTTAACTGCCTAC 60.095 50.000 24.35 5.12 0.00 3.18
2191 2656 2.159382 GCCAAGCTTGTTAACTGCCTA 58.841 47.619 24.35 0.00 0.00 3.93
2192 2657 0.961753 GCCAAGCTTGTTAACTGCCT 59.038 50.000 24.35 5.36 0.00 4.75
2193 2658 0.387239 CGCCAAGCTTGTTAACTGCC 60.387 55.000 24.35 4.57 0.00 4.85
2194 2659 0.310854 ACGCCAAGCTTGTTAACTGC 59.689 50.000 24.35 17.48 0.00 4.40
2195 2660 2.223479 ACAACGCCAAGCTTGTTAACTG 60.223 45.455 24.35 16.00 30.35 3.16
2196 2661 2.021457 ACAACGCCAAGCTTGTTAACT 58.979 42.857 24.35 2.83 30.35 2.24
2197 2662 2.381589 GACAACGCCAAGCTTGTTAAC 58.618 47.619 24.35 10.27 33.01 2.01
2198 2663 1.003331 CGACAACGCCAAGCTTGTTAA 60.003 47.619 24.35 0.00 33.01 2.01
2199 2664 0.584396 CGACAACGCCAAGCTTGTTA 59.416 50.000 24.35 0.00 33.01 2.41
2200 2665 1.092921 TCGACAACGCCAAGCTTGTT 61.093 50.000 24.35 10.15 39.58 2.83
2201 2666 1.092921 TTCGACAACGCCAAGCTTGT 61.093 50.000 24.35 5.90 39.58 3.16
2202 2667 0.028770 TTTCGACAACGCCAAGCTTG 59.971 50.000 19.93 19.93 39.58 4.01
2203 2668 0.028902 GTTTCGACAACGCCAAGCTT 59.971 50.000 0.00 0.00 39.58 3.74
2204 2669 1.647084 GTTTCGACAACGCCAAGCT 59.353 52.632 0.00 0.00 39.58 3.74
2205 2670 1.721133 CGTTTCGACAACGCCAAGC 60.721 57.895 16.01 0.00 39.58 4.01
2206 2671 4.489683 CGTTTCGACAACGCCAAG 57.510 55.556 16.01 0.00 39.58 3.61
2211 2676 0.381428 GACACAGCGTTTCGACAACG 60.381 55.000 20.87 20.87 45.56 4.10
2212 2677 0.042448 GGACACAGCGTTTCGACAAC 60.042 55.000 0.00 0.00 0.00 3.32
2213 2678 0.460459 TGGACACAGCGTTTCGACAA 60.460 50.000 0.00 0.00 0.00 3.18
2214 2679 1.142097 TGGACACAGCGTTTCGACA 59.858 52.632 0.00 0.00 0.00 4.35
2215 2680 1.563173 GTGGACACAGCGTTTCGAC 59.437 57.895 0.00 0.00 0.00 4.20
2216 2681 1.593209 GGTGGACACAGCGTTTCGA 60.593 57.895 4.69 0.00 35.13 3.71
2217 2682 2.604174 GGGTGGACACAGCGTTTCG 61.604 63.158 4.69 0.00 45.82 3.46
2218 2683 1.098712 TTGGGTGGACACAGCGTTTC 61.099 55.000 4.69 0.00 45.82 2.78
2219 2684 0.681564 TTTGGGTGGACACAGCGTTT 60.682 50.000 4.69 0.00 45.82 3.60
2220 2685 1.077357 TTTGGGTGGACACAGCGTT 60.077 52.632 4.69 0.00 45.82 4.84
2221 2686 1.525995 CTTTGGGTGGACACAGCGT 60.526 57.895 4.69 0.00 45.82 5.07
2222 2687 2.260869 CCTTTGGGTGGACACAGCG 61.261 63.158 4.69 0.00 45.82 5.18
2223 2688 1.150536 TCCTTTGGGTGGACACAGC 59.849 57.895 4.69 0.00 44.19 4.40
2229 2694 0.698238 CCTGATGTCCTTTGGGTGGA 59.302 55.000 0.00 0.00 0.00 4.02
2230 2695 0.698238 TCCTGATGTCCTTTGGGTGG 59.302 55.000 0.00 0.00 0.00 4.61
2231 2696 1.352352 AGTCCTGATGTCCTTTGGGTG 59.648 52.381 0.00 0.00 0.00 4.61
2232 2697 1.352352 CAGTCCTGATGTCCTTTGGGT 59.648 52.381 0.00 0.00 0.00 4.51
2233 2698 1.352352 ACAGTCCTGATGTCCTTTGGG 59.648 52.381 0.40 0.00 0.00 4.12
2234 2699 2.867109 ACAGTCCTGATGTCCTTTGG 57.133 50.000 0.40 0.00 0.00 3.28
2235 2700 5.152623 TCTAACAGTCCTGATGTCCTTTG 57.847 43.478 0.40 0.00 0.00 2.77
2236 2701 5.071788 TGTTCTAACAGTCCTGATGTCCTTT 59.928 40.000 0.40 0.00 34.30 3.11
2237 2702 4.593206 TGTTCTAACAGTCCTGATGTCCTT 59.407 41.667 0.40 0.00 34.30 3.36
2238 2703 4.160329 TGTTCTAACAGTCCTGATGTCCT 58.840 43.478 0.40 0.00 34.30 3.85
2239 2704 4.537135 TGTTCTAACAGTCCTGATGTCC 57.463 45.455 0.40 0.00 34.30 4.02
2251 2716 5.576774 CAGTGATATTGCGACTGTTCTAACA 59.423 40.000 0.00 0.00 33.77 2.41
2252 2717 5.577164 ACAGTGATATTGCGACTGTTCTAAC 59.423 40.000 0.00 0.00 46.41 2.34
2253 2718 5.720202 ACAGTGATATTGCGACTGTTCTAA 58.280 37.500 0.00 0.00 46.41 2.10
2254 2719 5.324784 ACAGTGATATTGCGACTGTTCTA 57.675 39.130 0.00 0.00 46.41 2.10
2255 2720 4.193826 ACAGTGATATTGCGACTGTTCT 57.806 40.909 0.00 0.00 46.41 3.01
2256 2721 5.220416 GGTTACAGTGATATTGCGACTGTTC 60.220 44.000 9.13 4.27 46.41 3.18
2257 2722 4.630069 GGTTACAGTGATATTGCGACTGTT 59.370 41.667 9.13 0.00 46.41 3.16
2259 2724 3.242944 CGGTTACAGTGATATTGCGACTG 59.757 47.826 0.00 0.00 42.39 3.51
2260 2725 3.129813 TCGGTTACAGTGATATTGCGACT 59.870 43.478 0.00 0.00 0.00 4.18
2261 2726 3.242248 GTCGGTTACAGTGATATTGCGAC 59.758 47.826 0.00 0.00 0.00 5.19
2262 2727 3.119424 TGTCGGTTACAGTGATATTGCGA 60.119 43.478 0.00 0.00 33.01 5.10
2263 2728 3.183754 TGTCGGTTACAGTGATATTGCG 58.816 45.455 0.00 0.00 33.01 4.85
2264 2729 5.734855 AATGTCGGTTACAGTGATATTGC 57.265 39.130 0.00 0.00 42.70 3.56
2272 2737 2.991190 CGCTTACAATGTCGGTTACAGT 59.009 45.455 0.00 0.00 42.70 3.55
2273 2738 2.222729 GCGCTTACAATGTCGGTTACAG 60.223 50.000 0.00 0.00 42.70 2.74
2280 2745 0.796312 AACAGGCGCTTACAATGTCG 59.204 50.000 7.64 0.00 0.00 4.35
2286 2751 4.693532 CCTGAACAGGCGCTTACA 57.306 55.556 7.64 0.00 42.44 2.41
2304 2770 3.057315 CGGATGCCTGGGCTTTTATATTG 60.057 47.826 13.05 0.00 42.51 1.90
2305 2771 3.157087 CGGATGCCTGGGCTTTTATATT 58.843 45.455 13.05 0.00 42.51 1.28
2317 2783 3.391506 TCTGTATTGATCGGATGCCTG 57.608 47.619 0.00 0.00 0.00 4.85
2319 2785 5.482908 AGTTATCTGTATTGATCGGATGCC 58.517 41.667 0.00 0.00 33.62 4.40
2320 2786 8.709386 AATAGTTATCTGTATTGATCGGATGC 57.291 34.615 0.00 0.00 33.62 3.91
2321 2787 9.860898 TGAATAGTTATCTGTATTGATCGGATG 57.139 33.333 0.00 0.00 33.62 3.51
2322 2788 9.862371 GTGAATAGTTATCTGTATTGATCGGAT 57.138 33.333 0.00 0.00 35.45 4.18
2323 2789 9.078990 AGTGAATAGTTATCTGTATTGATCGGA 57.921 33.333 0.00 0.00 0.00 4.55
2324 2790 9.698309 AAGTGAATAGTTATCTGTATTGATCGG 57.302 33.333 0.00 0.00 0.00 4.18
2340 2806 8.592809 AGAGTCAGAGAAAATGAAGTGAATAGT 58.407 33.333 0.00 0.00 0.00 2.12
2341 2807 9.086336 GAGAGTCAGAGAAAATGAAGTGAATAG 57.914 37.037 0.00 0.00 0.00 1.73
2342 2808 8.811017 AGAGAGTCAGAGAAAATGAAGTGAATA 58.189 33.333 0.00 0.00 0.00 1.75
2343 2809 7.678837 AGAGAGTCAGAGAAAATGAAGTGAAT 58.321 34.615 0.00 0.00 0.00 2.57
2357 2824 5.553290 TGATAACGTGAAGAGAGTCAGAG 57.447 43.478 0.00 0.00 0.00 3.35
2358 2825 5.677344 GCATGATAACGTGAAGAGAGTCAGA 60.677 44.000 0.00 0.00 35.25 3.27
2359 2826 4.502282 GCATGATAACGTGAAGAGAGTCAG 59.498 45.833 0.00 0.00 35.25 3.51
2360 2827 4.082245 TGCATGATAACGTGAAGAGAGTCA 60.082 41.667 0.00 0.00 35.25 3.41
2361 2828 4.266502 GTGCATGATAACGTGAAGAGAGTC 59.733 45.833 0.00 0.00 35.25 3.36
2440 2907 4.209538 TCATCCGGCAAGAAAATCATCAT 58.790 39.130 0.00 0.00 0.00 2.45
2462 2929 1.021390 CCGAGCGAAGGAACAAGCAT 61.021 55.000 0.00 0.00 0.00 3.79
2488 2959 4.792804 GGTGCTCTCTGGCCTGGC 62.793 72.222 11.05 11.05 0.00 4.85
2489 2960 4.463879 CGGTGCTCTCTGGCCTGG 62.464 72.222 10.07 0.00 0.00 4.45
2490 2961 4.463879 CCGGTGCTCTCTGGCCTG 62.464 72.222 3.32 2.92 0.00 4.85
2523 2994 1.519455 CGAGAGCGAAATTCCGGCT 60.519 57.895 0.00 0.00 40.82 5.52
2554 3025 1.214589 CGACCGTCGGAGTTCCATT 59.785 57.895 20.51 0.00 36.00 3.16
2645 3117 0.037734 CGGGGTAGCCAAAGGTTTCT 59.962 55.000 14.06 0.00 0.00 2.52
2718 3190 0.693049 CAGGGGCTCCAGTGTAGTTT 59.307 55.000 4.79 0.00 34.83 2.66
2725 3197 3.810687 TTGGTCCAGGGGCTCCAGT 62.811 63.158 4.79 0.00 34.83 4.00
2815 3287 1.003331 CAGAGCGTCGACCATCTAGTC 60.003 57.143 10.58 0.00 0.00 2.59
2818 3290 1.400846 GTTCAGAGCGTCGACCATCTA 59.599 52.381 10.58 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.