Multiple sequence alignment - TraesCS1B01G061800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G061800 chr1B 100.000 4900 0 0 1 4900 46878143 46873244 0.000000e+00 9049.0
1 TraesCS1B01G061800 chr1B 78.537 615 109 13 1327 1928 666029522 666030126 2.770000e-102 383.0
2 TraesCS1B01G061800 chr1D 92.134 1462 96 9 3270 4720 28214434 28212981 0.000000e+00 2045.0
3 TraesCS1B01G061800 chr1D 92.451 1126 72 2 921 2045 28216298 28215185 0.000000e+00 1596.0
4 TraesCS1B01G061800 chr1D 86.438 553 63 12 2199 2742 28215195 28214646 3.270000e-166 595.0
5 TraesCS1B01G061800 chr1D 89.222 334 26 8 2 333 28217761 28217436 4.570000e-110 409.0
6 TraesCS1B01G061800 chr1D 91.071 168 13 2 3005 3171 28214644 28214478 4.930000e-55 226.0
7 TraesCS1B01G061800 chr1D 89.677 155 15 1 2048 2202 367162532 367162685 3.870000e-46 196.0
8 TraesCS1B01G061800 chr1D 91.818 110 7 1 820 927 28217103 28216994 8.490000e-33 152.0
9 TraesCS1B01G061800 chr1A 92.295 1246 64 10 820 2045 29244400 29243167 0.000000e+00 1740.0
10 TraesCS1B01G061800 chr1A 90.520 1192 78 9 2877 4047 29242382 29241205 0.000000e+00 1543.0
11 TraesCS1B01G061800 chr1A 85.251 678 53 20 2208 2844 29243168 29242497 0.000000e+00 654.0
12 TraesCS1B01G061800 chr1A 85.008 647 85 7 1086 1725 294735319 294734678 0.000000e+00 647.0
13 TraesCS1B01G061800 chr1A 81.037 849 94 28 2 801 29246222 29245392 9.010000e-172 614.0
14 TraesCS1B01G061800 chr2B 83.740 615 70 7 1118 1725 762509529 762510120 5.540000e-154 555.0
15 TraesCS1B01G061800 chr2B 77.143 210 31 10 532 737 526388922 526389118 6.710000e-19 106.0
16 TraesCS1B01G061800 chr4B 82.515 652 79 15 1091 1725 40226429 40227062 1.550000e-149 540.0
17 TraesCS1B01G061800 chr4B 88.679 159 17 1 2048 2205 630428807 630428965 5.010000e-45 193.0
18 TraesCS1B01G061800 chr4B 88.742 151 17 0 2048 2198 516951178 516951328 8.380000e-43 185.0
19 TraesCS1B01G061800 chr4B 79.412 204 37 4 540 738 324658329 324658126 6.610000e-29 139.0
20 TraesCS1B01G061800 chr7D 87.931 406 40 6 1327 1725 214938810 214939213 2.060000e-128 470.0
21 TraesCS1B01G061800 chr7D 88.889 153 16 1 2048 2200 53450595 53450746 2.330000e-43 187.0
22 TraesCS1B01G061800 chr7D 100.000 28 0 0 547 574 56621293 56621320 9.000000e-03 52.8
23 TraesCS1B01G061800 chr5A 82.507 383 64 3 1081 1463 520625058 520625437 2.830000e-87 333.0
24 TraesCS1B01G061800 chr7B 80.124 322 54 2 1386 1697 74325885 74326206 1.060000e-56 231.0
25 TraesCS1B01G061800 chr2D 80.247 324 50 6 1386 1697 478833555 478833234 1.060000e-56 231.0
26 TraesCS1B01G061800 chr2D 90.850 153 12 2 2048 2200 591311109 591310959 2.310000e-48 204.0
27 TraesCS1B01G061800 chr2D 90.789 152 13 1 2048 2199 45478214 45478364 8.320000e-48 202.0
28 TraesCS1B01G061800 chr2D 88.816 152 16 1 2048 2199 518183008 518183158 8.380000e-43 185.0
29 TraesCS1B01G061800 chr3D 89.375 160 16 1 2048 2207 488863579 488863421 2.990000e-47 200.0
30 TraesCS1B01G061800 chr3D 75.122 205 44 7 541 741 91209251 91209050 6.760000e-14 89.8
31 TraesCS1B01G061800 chr3D 90.566 53 5 0 471 523 591633434 591633486 2.450000e-08 71.3
32 TraesCS1B01G061800 chr4D 87.730 163 18 2 2048 2209 447293812 447293651 6.470000e-44 189.0
33 TraesCS1B01G061800 chr4A 82.075 212 35 3 535 743 75952526 75952315 1.400000e-40 178.0
34 TraesCS1B01G061800 chr7A 80.321 249 34 7 1464 1700 427622677 427622432 1.810000e-39 174.0
35 TraesCS1B01G061800 chr7A 78.125 224 41 8 4046 4265 27795035 27795254 8.560000e-28 135.0
36 TraesCS1B01G061800 chr6B 78.302 212 40 5 532 738 392937807 392938017 1.110000e-26 132.0
37 TraesCS1B01G061800 chrUn 78.125 224 36 9 4055 4269 101365522 101365303 3.980000e-26 130.0
38 TraesCS1B01G061800 chr6A 88.235 85 10 0 1174 1258 68142977 68142893 8.680000e-18 102.0
39 TraesCS1B01G061800 chr2A 88.235 85 10 0 1174 1258 755746762 755746678 8.680000e-18 102.0
40 TraesCS1B01G061800 chr3A 94.737 38 2 0 659 696 356082056 356082093 5.300000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G061800 chr1B 46873244 46878143 4899 True 9049.000000 9049 100.000000 1 4900 1 chr1B.!!$R1 4899
1 TraesCS1B01G061800 chr1B 666029522 666030126 604 False 383.000000 383 78.537000 1327 1928 1 chr1B.!!$F1 601
2 TraesCS1B01G061800 chr1D 28212981 28217761 4780 True 837.166667 2045 90.522333 2 4720 6 chr1D.!!$R1 4718
3 TraesCS1B01G061800 chr1A 29241205 29246222 5017 True 1137.750000 1740 87.275750 2 4047 4 chr1A.!!$R2 4045
4 TraesCS1B01G061800 chr1A 294734678 294735319 641 True 647.000000 647 85.008000 1086 1725 1 chr1A.!!$R1 639
5 TraesCS1B01G061800 chr2B 762509529 762510120 591 False 555.000000 555 83.740000 1118 1725 1 chr2B.!!$F2 607
6 TraesCS1B01G061800 chr4B 40226429 40227062 633 False 540.000000 540 82.515000 1091 1725 1 chr4B.!!$F1 634

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 62 0.179018 ATGATAAGGTTCCCCGCTGC 60.179 55.0 0.00 0.0 35.12 5.25 F
1045 2790 0.170116 CTCGCTTCTCTTCACGCTCT 59.830 55.0 0.00 0.0 0.00 4.09 F
1653 3420 0.253160 ACTCCCTCAGGCCCAACATA 60.253 55.0 0.00 0.0 0.00 2.29 F
2117 3900 0.173708 ATCCGAGTTCGAGTCTTGGC 59.826 55.0 16.50 0.0 43.02 4.52 F
2119 3902 0.456995 CCGAGTTCGAGTCTTGGCTC 60.457 60.0 11.37 0.0 43.02 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1651 3418 0.680061 GCCGGGAAGAAGTCGGATAT 59.320 55.0 2.18 0.00 45.96 1.63 R
2098 3881 0.173708 GCCAAGACTCGAACTCGGAT 59.826 55.0 0.00 0.00 40.29 4.18 R
3611 5547 0.321298 CCGGGATGAACTTGTTCGGT 60.321 55.0 8.68 0.90 0.00 4.69 R
3774 5710 0.590195 GTCCACTCAAAGCAGTGCAG 59.410 55.0 19.20 8.32 42.29 4.41 R
3906 5842 1.328279 AAGTACACCCAAAGCCAAGC 58.672 50.0 0.00 0.00 0.00 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 57 1.683385 GCTGCAATGATAAGGTTCCCC 59.317 52.381 0.00 0.00 0.00 4.81
49 58 1.949525 CTGCAATGATAAGGTTCCCCG 59.050 52.381 0.00 0.00 35.12 5.73
50 59 0.668535 GCAATGATAAGGTTCCCCGC 59.331 55.000 0.00 0.00 35.12 6.13
51 60 1.750682 GCAATGATAAGGTTCCCCGCT 60.751 52.381 0.00 0.00 35.12 5.52
52 61 1.949525 CAATGATAAGGTTCCCCGCTG 59.050 52.381 0.00 0.00 35.12 5.18
53 62 0.179018 ATGATAAGGTTCCCCGCTGC 60.179 55.000 0.00 0.00 35.12 5.25
54 63 1.271840 TGATAAGGTTCCCCGCTGCT 61.272 55.000 0.00 0.00 35.12 4.24
55 64 0.815615 GATAAGGTTCCCCGCTGCTG 60.816 60.000 0.00 0.00 35.12 4.41
56 65 1.271840 ATAAGGTTCCCCGCTGCTGA 61.272 55.000 0.00 0.00 35.12 4.26
57 66 1.899437 TAAGGTTCCCCGCTGCTGAG 61.899 60.000 0.00 0.00 35.12 3.35
58 67 3.706373 GGTTCCCCGCTGCTGAGA 61.706 66.667 0.00 0.00 0.00 3.27
59 68 2.435059 GTTCCCCGCTGCTGAGAC 60.435 66.667 0.00 0.00 0.00 3.36
77 86 7.500892 TGCTGAGACAAAACCTTTATTCTTGTA 59.499 33.333 0.00 0.00 30.62 2.41
104 113 8.447833 CAGTACTACTGTTCTTCTAAGAGACAG 58.552 40.741 20.92 20.92 41.19 3.51
105 114 8.158789 AGTACTACTGTTCTTCTAAGAGACAGT 58.841 37.037 25.88 25.88 46.50 3.55
106 115 7.209471 ACTACTGTTCTTCTAAGAGACAGTG 57.791 40.000 28.02 23.19 45.62 3.66
107 116 4.877282 ACTGTTCTTCTAAGAGACAGTGC 58.123 43.478 24.11 0.00 45.10 4.40
108 117 4.342378 ACTGTTCTTCTAAGAGACAGTGCA 59.658 41.667 24.11 0.00 45.10 4.57
143 152 3.128589 TGCCTTTATTCGCTGGTCATTTC 59.871 43.478 0.00 0.00 0.00 2.17
181 190 4.215399 TGGAATGTGATTCTTTCGACCAAC 59.785 41.667 0.00 0.00 39.24 3.77
211 220 6.360370 AGTGTGATTCTTACCTTAGCTTGA 57.640 37.500 0.00 0.00 0.00 3.02
212 221 6.769512 AGTGTGATTCTTACCTTAGCTTGAA 58.230 36.000 0.00 0.00 0.00 2.69
401 423 9.905713 AATTATTAAAGCTATCAACTGTCCAGA 57.094 29.630 0.40 0.00 0.00 3.86
468 491 6.669125 TTTCATCTCAATTTGGTGAACCAT 57.331 33.333 2.34 0.00 46.97 3.55
469 492 6.669125 TTCATCTCAATTTGGTGAACCATT 57.331 33.333 2.34 0.00 46.97 3.16
470 493 6.028146 TCATCTCAATTTGGTGAACCATTG 57.972 37.500 2.34 6.27 46.97 2.82
472 495 5.867903 TCTCAATTTGGTGAACCATTGTT 57.132 34.783 13.07 3.28 46.97 2.83
473 496 6.968263 TCTCAATTTGGTGAACCATTGTTA 57.032 33.333 13.07 3.59 46.97 2.41
476 499 7.286546 TCTCAATTTGGTGAACCATTGTTAGAA 59.713 33.333 13.07 0.66 46.97 2.10
477 500 7.432869 TCAATTTGGTGAACCATTGTTAGAAG 58.567 34.615 13.07 0.00 46.97 2.85
479 502 4.715534 TGGTGAACCATTGTTAGAAGGA 57.284 40.909 0.00 0.00 42.01 3.36
480 503 4.394729 TGGTGAACCATTGTTAGAAGGAC 58.605 43.478 0.00 0.00 42.01 3.85
481 504 4.141367 TGGTGAACCATTGTTAGAAGGACA 60.141 41.667 0.00 0.00 42.01 4.02
483 506 5.063880 GTGAACCATTGTTAGAAGGACAGT 58.936 41.667 0.00 0.00 33.97 3.55
484 507 5.049405 GTGAACCATTGTTAGAAGGACAGTG 60.049 44.000 0.00 0.00 33.97 3.66
485 508 4.974645 ACCATTGTTAGAAGGACAGTGA 57.025 40.909 0.00 0.00 37.02 3.41
486 509 5.505181 ACCATTGTTAGAAGGACAGTGAT 57.495 39.130 0.00 0.00 37.02 3.06
488 511 7.200434 ACCATTGTTAGAAGGACAGTGATAT 57.800 36.000 0.00 0.00 37.02 1.63
489 512 7.275920 ACCATTGTTAGAAGGACAGTGATATC 58.724 38.462 0.00 0.00 37.02 1.63
490 513 7.126421 ACCATTGTTAGAAGGACAGTGATATCT 59.874 37.037 3.98 0.00 37.02 1.98
491 514 7.655328 CCATTGTTAGAAGGACAGTGATATCTC 59.345 40.741 3.98 0.00 37.02 2.75
492 515 7.962995 TTGTTAGAAGGACAGTGATATCTCT 57.037 36.000 3.98 2.61 0.00 3.10
493 516 9.647918 ATTGTTAGAAGGACAGTGATATCTCTA 57.352 33.333 6.97 0.00 0.00 2.43
500 536 4.039366 GGACAGTGATATCTCTAACCCACC 59.961 50.000 6.97 2.49 0.00 4.61
502 538 4.651503 ACAGTGATATCTCTAACCCACCAG 59.348 45.833 6.97 0.00 0.00 4.00
504 540 4.078571 AGTGATATCTCTAACCCACCAGGA 60.079 45.833 5.50 0.00 39.89 3.86
510 546 3.913799 TCTCTAACCCACCAGGATTCAAA 59.086 43.478 0.00 0.00 39.89 2.69
511 547 4.352595 TCTCTAACCCACCAGGATTCAAAA 59.647 41.667 0.00 0.00 39.89 2.44
513 549 3.328535 AACCCACCAGGATTCAAAACT 57.671 42.857 0.00 0.00 39.89 2.66
514 550 3.328535 ACCCACCAGGATTCAAAACTT 57.671 42.857 0.00 0.00 39.89 2.66
517 553 3.834231 CCCACCAGGATTCAAAACTTGAT 59.166 43.478 0.00 0.00 37.39 2.57
521 557 4.219288 ACCAGGATTCAAAACTTGATGCTC 59.781 41.667 0.00 0.00 39.84 4.26
530 566 5.801444 TCAAAACTTGATGCTCGCATTATTG 59.199 36.000 5.79 4.08 36.70 1.90
531 567 4.970662 AACTTGATGCTCGCATTATTGT 57.029 36.364 5.79 2.18 36.70 2.71
537 582 2.083002 TGCTCGCATTATTGTTGCAGA 58.917 42.857 0.00 0.00 40.14 4.26
542 587 5.062558 GCTCGCATTATTGTTGCAGAATTTT 59.937 36.000 0.00 0.00 40.14 1.82
544 589 5.285845 TCGCATTATTGTTGCAGAATTTTCG 59.714 36.000 0.00 0.00 40.14 3.46
545 590 5.285845 CGCATTATTGTTGCAGAATTTTCGA 59.714 36.000 0.00 0.00 40.14 3.71
563 608 4.260194 CGATGTGCGTTCAGTGGA 57.740 55.556 0.00 0.00 34.64 4.02
564 609 2.527671 CGATGTGCGTTCAGTGGAA 58.472 52.632 0.00 0.00 34.64 3.53
566 611 0.798776 GATGTGCGTTCAGTGGAAGG 59.201 55.000 0.00 0.00 40.86 3.46
570 615 0.976641 TGCGTTCAGTGGAAGGAGAT 59.023 50.000 1.72 0.00 40.47 2.75
575 620 2.996621 GTTCAGTGGAAGGAGATGTTCG 59.003 50.000 0.00 0.00 32.62 3.95
576 621 2.248248 TCAGTGGAAGGAGATGTTCGT 58.752 47.619 0.00 0.00 0.00 3.85
601 646 3.657448 TACGAGGCGCATGTGGTGG 62.657 63.158 10.83 0.00 0.00 4.61
606 651 4.465512 GCGCATGTGGTGGCTTCG 62.466 66.667 8.62 0.00 0.00 3.79
608 653 2.616330 CGCATGTGGTGGCTTCGTT 61.616 57.895 0.00 0.00 0.00 3.85
614 659 3.134574 TGTGGTGGCTTCGTTAATCTT 57.865 42.857 0.00 0.00 0.00 2.40
620 665 6.526674 GTGGTGGCTTCGTTAATCTTAAAATG 59.473 38.462 0.00 0.00 0.00 2.32
621 666 6.431543 TGGTGGCTTCGTTAATCTTAAAATGA 59.568 34.615 0.00 0.00 0.00 2.57
642 687 8.628630 AATGATATATCGACTCAGTCTCTTGA 57.371 34.615 2.61 0.00 0.00 3.02
645 690 7.934120 TGATATATCGACTCAGTCTCTTGAAGA 59.066 37.037 2.61 0.00 0.00 2.87
648 693 4.075682 TCGACTCAGTCTCTTGAAGATGT 58.924 43.478 2.61 0.00 36.11 3.06
650 695 5.010112 TCGACTCAGTCTCTTGAAGATGTTT 59.990 40.000 2.61 0.00 36.11 2.83
656 701 7.786030 TCAGTCTCTTGAAGATGTTTATAGGG 58.214 38.462 0.00 0.00 36.11 3.53
657 702 6.989169 CAGTCTCTTGAAGATGTTTATAGGGG 59.011 42.308 0.00 0.00 36.11 4.79
664 709 5.974370 TGAAGATGTTTATAGGGGTAGGGTT 59.026 40.000 0.00 0.00 0.00 4.11
674 719 1.004979 GGGGTAGGGTTTGCATGTGTA 59.995 52.381 0.00 0.00 0.00 2.90
711 756 4.030306 GTGTATGCACTTATATACGAGCGC 59.970 45.833 6.69 0.00 42.13 5.92
717 762 1.649171 CTTATATACGAGCGCTTGCGG 59.351 52.381 24.80 10.61 45.69 5.69
720 765 1.788067 TATACGAGCGCTTGCGGCTA 61.788 55.000 24.80 9.78 45.69 3.93
776 824 9.826574 ATGATATCAAATTTAGTTTGCAAGCAT 57.173 25.926 16.04 3.55 45.45 3.79
792 840 4.627035 GCAAGCATAACAATTTCTTGGTCC 59.373 41.667 0.00 0.00 36.64 4.46
808 1680 9.974980 TTTCTTGGTCCAAAAATAAACTGATAC 57.025 29.630 5.64 0.00 0.00 2.24
840 1865 1.781555 GACAGCAACGGTGATCACG 59.218 57.895 19.33 16.15 34.87 4.35
887 1912 2.354503 GCTCTCACCATGTGACATCAGT 60.355 50.000 0.00 0.00 37.67 3.41
896 1923 4.740205 CCATGTGACATCAGTATCACGTAC 59.260 45.833 0.00 0.00 46.79 3.67
1040 2785 2.094494 TCATGTCCTCGCTTCTCTTCAC 60.094 50.000 0.00 0.00 0.00 3.18
1045 2790 0.170116 CTCGCTTCTCTTCACGCTCT 59.830 55.000 0.00 0.00 0.00 4.09
1048 2793 1.667177 CGCTTCTCTTCACGCTCTTCA 60.667 52.381 0.00 0.00 0.00 3.02
1049 2794 2.615869 GCTTCTCTTCACGCTCTTCAT 58.384 47.619 0.00 0.00 0.00 2.57
1053 2798 4.527509 TCTCTTCACGCTCTTCATTTCT 57.472 40.909 0.00 0.00 0.00 2.52
1056 2801 6.634805 TCTCTTCACGCTCTTCATTTCTTAT 58.365 36.000 0.00 0.00 0.00 1.73
1059 2804 4.507710 TCACGCTCTTCATTTCTTATGCT 58.492 39.130 0.00 0.00 0.00 3.79
1206 2951 2.040544 CGGCCCTTTGATGACGCTT 61.041 57.895 0.00 0.00 0.00 4.68
1285 3030 2.171079 CAGACGCACAACACCGTGT 61.171 57.895 0.00 0.00 39.19 4.49
1651 3418 2.121963 ACTCCCTCAGGCCCAACA 60.122 61.111 0.00 0.00 0.00 3.33
1653 3420 0.253160 ACTCCCTCAGGCCCAACATA 60.253 55.000 0.00 0.00 0.00 2.29
1768 3544 2.835431 AGATCGACCAGCGGAGGG 60.835 66.667 1.50 0.00 41.33 4.30
1952 3735 3.741344 GCATAATCGAATCGCCTAAGTGT 59.259 43.478 0.00 0.00 0.00 3.55
1964 3747 6.555812 TCGCCTAAGTGTGAGTACTATATG 57.444 41.667 0.00 0.00 0.00 1.78
1966 3749 7.219322 TCGCCTAAGTGTGAGTACTATATGTA 58.781 38.462 0.00 0.00 0.00 2.29
1985 3768 5.376854 TGTAAAGAGTGGAAGTACGTACC 57.623 43.478 21.80 7.92 0.00 3.34
2027 3810 4.558470 CGTGACATTTTCCGGATTGATTTG 59.442 41.667 4.15 0.20 0.00 2.32
2039 3822 6.376864 TCCGGATTGATTTGCTAATCTTTTGA 59.623 34.615 19.31 7.89 40.68 2.69
2045 3828 8.915871 TTGATTTGCTAATCTTTTGATACAGC 57.084 30.769 19.31 0.00 42.63 4.40
2046 3829 8.054152 TGATTTGCTAATCTTTTGATACAGCA 57.946 30.769 19.31 9.63 46.40 4.41
2049 3832 6.915544 TGCTAATCTTTTGATACAGCAGAG 57.084 37.500 9.63 0.00 44.82 3.35
2050 3833 5.819379 TGCTAATCTTTTGATACAGCAGAGG 59.181 40.000 9.63 0.00 44.82 3.69
2051 3834 6.051717 GCTAATCTTTTGATACAGCAGAGGA 58.948 40.000 0.00 0.00 42.24 3.71
2052 3835 6.018343 GCTAATCTTTTGATACAGCAGAGGAC 60.018 42.308 0.00 0.00 42.24 3.85
2053 3836 3.849911 TCTTTTGATACAGCAGAGGACG 58.150 45.455 0.00 0.00 0.00 4.79
2054 3837 2.672961 TTTGATACAGCAGAGGACGG 57.327 50.000 0.00 0.00 0.00 4.79
2055 3838 0.824109 TTGATACAGCAGAGGACGGG 59.176 55.000 0.00 0.00 0.00 5.28
2056 3839 1.043116 TGATACAGCAGAGGACGGGG 61.043 60.000 0.00 0.00 0.00 5.73
2057 3840 1.001760 ATACAGCAGAGGACGGGGT 59.998 57.895 0.00 0.00 0.00 4.95
2058 3841 1.330655 ATACAGCAGAGGACGGGGTG 61.331 60.000 0.00 0.00 36.20 4.61
2059 3842 2.725127 TACAGCAGAGGACGGGGTGT 62.725 60.000 0.00 0.00 44.48 4.16
2080 3863 4.974721 CCCGTTGGTTGGGCAGCT 62.975 66.667 0.00 0.00 40.47 4.24
2081 3864 3.673484 CCGTTGGTTGGGCAGCTG 61.673 66.667 10.11 10.11 0.00 4.24
2082 3865 3.673484 CGTTGGTTGGGCAGCTGG 61.673 66.667 17.12 0.00 0.00 4.85
2083 3866 2.203480 GTTGGTTGGGCAGCTGGA 60.203 61.111 17.12 0.00 0.00 3.86
2084 3867 2.115910 TTGGTTGGGCAGCTGGAG 59.884 61.111 17.12 0.00 0.00 3.86
2085 3868 2.766925 TTGGTTGGGCAGCTGGAGT 61.767 57.895 17.12 0.00 0.00 3.85
2086 3869 2.116125 GGTTGGGCAGCTGGAGTT 59.884 61.111 17.12 0.00 0.00 3.01
2087 3870 2.270986 GGTTGGGCAGCTGGAGTTG 61.271 63.158 17.12 0.00 0.00 3.16
2092 3875 3.896479 GCAGCTGGAGTTGCTACC 58.104 61.111 17.12 0.00 46.65 3.18
2093 3876 1.003355 GCAGCTGGAGTTGCTACCA 60.003 57.895 17.12 0.00 46.65 3.25
2097 3880 3.944476 CTGGAGTTGCTACCAGCTT 57.056 52.632 0.00 0.00 45.30 3.74
2099 3882 3.550437 CTGGAGTTGCTACCAGCTTAT 57.450 47.619 0.00 0.00 45.30 1.73
2100 3883 3.462021 CTGGAGTTGCTACCAGCTTATC 58.538 50.000 0.00 0.00 45.30 1.75
2101 3884 2.170607 TGGAGTTGCTACCAGCTTATCC 59.829 50.000 0.00 4.82 42.97 2.59
2102 3885 2.474816 GAGTTGCTACCAGCTTATCCG 58.525 52.381 0.00 0.00 42.97 4.18
2103 3886 2.100916 GAGTTGCTACCAGCTTATCCGA 59.899 50.000 0.00 0.00 42.97 4.55
2104 3887 2.101582 AGTTGCTACCAGCTTATCCGAG 59.898 50.000 0.00 0.00 42.97 4.63
2105 3888 1.776662 TGCTACCAGCTTATCCGAGT 58.223 50.000 0.00 0.00 42.97 4.18
2106 3889 2.108168 TGCTACCAGCTTATCCGAGTT 58.892 47.619 0.00 0.00 42.97 3.01
2107 3890 2.100916 TGCTACCAGCTTATCCGAGTTC 59.899 50.000 0.00 0.00 42.97 3.01
2108 3891 2.859032 GCTACCAGCTTATCCGAGTTCG 60.859 54.545 0.00 0.00 38.45 3.95
2109 3892 1.471119 ACCAGCTTATCCGAGTTCGA 58.529 50.000 2.59 0.00 43.02 3.71
2110 3893 1.405821 ACCAGCTTATCCGAGTTCGAG 59.594 52.381 2.59 0.00 43.02 4.04
2111 3894 1.405821 CCAGCTTATCCGAGTTCGAGT 59.594 52.381 2.59 0.00 43.02 4.18
2112 3895 2.541999 CCAGCTTATCCGAGTTCGAGTC 60.542 54.545 2.59 0.00 43.02 3.36
2113 3896 2.356382 CAGCTTATCCGAGTTCGAGTCT 59.644 50.000 2.59 0.00 43.02 3.24
2114 3897 3.018149 AGCTTATCCGAGTTCGAGTCTT 58.982 45.455 2.59 0.00 43.02 3.01
2115 3898 3.109619 GCTTATCCGAGTTCGAGTCTTG 58.890 50.000 2.59 0.00 43.02 3.02
2116 3899 3.696898 CTTATCCGAGTTCGAGTCTTGG 58.303 50.000 15.63 15.63 43.02 3.61
2117 3900 0.173708 ATCCGAGTTCGAGTCTTGGC 59.826 55.000 16.50 0.00 43.02 4.52
2118 3901 0.894184 TCCGAGTTCGAGTCTTGGCT 60.894 55.000 16.50 0.00 43.02 4.75
2119 3902 0.456995 CCGAGTTCGAGTCTTGGCTC 60.457 60.000 11.37 0.00 43.02 4.70
2125 3908 2.507324 GAGTCTTGGCTCGGACGC 60.507 66.667 0.00 0.00 37.52 5.19
2126 3909 4.421479 AGTCTTGGCTCGGACGCG 62.421 66.667 3.53 3.53 37.52 6.01
2144 3927 3.479269 CGGTGCTCGCGGAGTTTC 61.479 66.667 6.13 0.00 31.39 2.78
2145 3928 2.048127 GGTGCTCGCGGAGTTTCT 60.048 61.111 6.13 0.00 31.39 2.52
2146 3929 1.668151 GGTGCTCGCGGAGTTTCTT 60.668 57.895 6.13 0.00 31.39 2.52
2147 3930 1.627550 GGTGCTCGCGGAGTTTCTTC 61.628 60.000 6.13 0.00 31.39 2.87
2148 3931 0.667792 GTGCTCGCGGAGTTTCTTCT 60.668 55.000 6.13 0.00 31.39 2.85
2149 3932 0.885879 TGCTCGCGGAGTTTCTTCTA 59.114 50.000 6.13 0.00 31.39 2.10
2150 3933 1.476891 TGCTCGCGGAGTTTCTTCTAT 59.523 47.619 6.13 0.00 31.39 1.98
2151 3934 2.686405 TGCTCGCGGAGTTTCTTCTATA 59.314 45.455 6.13 0.00 31.39 1.31
2152 3935 3.129813 TGCTCGCGGAGTTTCTTCTATAA 59.870 43.478 6.13 0.00 31.39 0.98
2153 3936 4.110482 GCTCGCGGAGTTTCTTCTATAAA 58.890 43.478 6.13 0.00 31.39 1.40
2154 3937 4.565564 GCTCGCGGAGTTTCTTCTATAAAA 59.434 41.667 6.13 0.00 31.39 1.52
2155 3938 5.063060 GCTCGCGGAGTTTCTTCTATAAAAA 59.937 40.000 6.13 0.00 31.39 1.94
2186 3969 4.434483 GGTTAGCCCTTGGGTTGG 57.566 61.111 7.61 0.00 34.28 3.77
2187 3970 1.463375 GGTTAGCCCTTGGGTTGGT 59.537 57.895 7.61 0.00 34.28 3.67
2188 3971 0.611062 GGTTAGCCCTTGGGTTGGTC 60.611 60.000 7.61 0.00 34.28 4.02
2189 3972 0.611062 GTTAGCCCTTGGGTTGGTCC 60.611 60.000 7.61 0.00 34.28 4.46
2260 4049 4.053469 ACCTCCCAAAATTCAAAACACG 57.947 40.909 0.00 0.00 0.00 4.49
2348 4144 5.049398 TGGTACGTTGGACATTTAAATGC 57.951 39.130 24.82 17.62 40.04 3.56
2433 4229 7.732222 TCAATAAGCCCATCCAGTTTTAATT 57.268 32.000 0.00 0.00 0.00 1.40
2538 4334 7.195374 AGTTTAGACACAGGCATAATTCCTA 57.805 36.000 0.00 0.00 31.52 2.94
2596 4399 7.812648 AGAAAATTCAACATGCCATTTTCATG 58.187 30.769 21.91 1.85 43.53 3.07
2751 4582 7.917505 GGTTAAGAATAATGAATCAGCCAGTTG 59.082 37.037 0.00 0.00 0.00 3.16
2762 4593 7.761409 TGAATCAGCCAGTTGATATGTTAAAC 58.239 34.615 0.00 0.00 36.81 2.01
2763 4594 7.392953 TGAATCAGCCAGTTGATATGTTAAACA 59.607 33.333 0.00 0.00 36.81 2.83
2764 4595 6.741992 TCAGCCAGTTGATATGTTAAACAG 57.258 37.500 0.00 0.00 0.00 3.16
2765 4596 6.472016 TCAGCCAGTTGATATGTTAAACAGA 58.528 36.000 0.00 0.00 0.00 3.41
2768 4599 7.752239 CAGCCAGTTGATATGTTAAACAGAAAG 59.248 37.037 0.00 0.00 0.00 2.62
2769 4600 7.448469 AGCCAGTTGATATGTTAAACAGAAAGT 59.552 33.333 0.00 0.00 0.00 2.66
2771 4602 9.398170 CCAGTTGATATGTTAAACAGAAAGTTG 57.602 33.333 0.00 0.00 41.19 3.16
2772 4603 9.950680 CAGTTGATATGTTAAACAGAAAGTTGT 57.049 29.630 0.00 0.00 41.19 3.32
2773 4604 9.950680 AGTTGATATGTTAAACAGAAAGTTGTG 57.049 29.630 0.00 0.00 41.19 3.33
2782 4614 9.813080 GTTAAACAGAAAGTTGTGCTATTAGAG 57.187 33.333 0.00 0.00 41.19 2.43
2789 4621 9.384764 AGAAAGTTGTGCTATTAGAGTAATTCC 57.615 33.333 0.00 0.00 0.00 3.01
2792 4624 6.979238 AGTTGTGCTATTAGAGTAATTCCGTC 59.021 38.462 0.00 0.00 0.00 4.79
2810 4642 3.027974 GTCTAAGGACGTCATATGGCC 57.972 52.381 18.91 0.00 32.47 5.36
2813 4645 3.709653 TCTAAGGACGTCATATGGCCTTT 59.290 43.478 18.91 6.00 39.51 3.11
2819 4651 7.676683 AGGACGTCATATGGCCTTTATATAT 57.323 36.000 18.91 0.00 0.00 0.86
2820 4652 8.777578 AGGACGTCATATGGCCTTTATATATA 57.222 34.615 18.91 0.00 0.00 0.86
2861 4693 7.644490 AGTTTTACGCATCAACATTAGTTTGA 58.356 30.769 0.00 0.00 35.28 2.69
2862 4694 7.589954 AGTTTTACGCATCAACATTAGTTTGAC 59.410 33.333 0.00 0.00 35.28 3.18
2863 4695 6.546972 TTACGCATCAACATTAGTTTGACA 57.453 33.333 0.00 0.00 35.28 3.58
2864 4696 5.431420 ACGCATCAACATTAGTTTGACAA 57.569 34.783 0.00 0.00 35.28 3.18
2865 4697 5.451908 ACGCATCAACATTAGTTTGACAAG 58.548 37.500 0.00 0.00 35.28 3.16
2866 4698 5.008613 ACGCATCAACATTAGTTTGACAAGT 59.991 36.000 0.00 0.00 35.28 3.16
2867 4699 6.203915 ACGCATCAACATTAGTTTGACAAGTA 59.796 34.615 0.00 0.00 35.28 2.24
2868 4700 7.094805 ACGCATCAACATTAGTTTGACAAGTAT 60.095 33.333 0.00 0.00 35.28 2.12
2869 4701 7.750458 CGCATCAACATTAGTTTGACAAGTATT 59.250 33.333 0.00 0.00 35.28 1.89
2870 4702 8.853345 GCATCAACATTAGTTTGACAAGTATTG 58.147 33.333 0.00 0.00 44.18 1.90
2871 4703 9.345517 CATCAACATTAGTTTGACAAGTATTGG 57.654 33.333 0.00 0.00 43.33 3.16
2872 4704 8.458573 TCAACATTAGTTTGACAAGTATTGGT 57.541 30.769 0.00 0.00 43.33 3.67
2998 4912 8.188799 TGGATGAAGTAAGAATAAGTACTCACG 58.811 37.037 0.00 0.00 30.18 4.35
3076 4990 3.353370 TTCATCATCATGCAGTGGTCA 57.647 42.857 0.00 0.00 0.00 4.02
3096 5011 9.740239 GTGGTCACTCATTACGTATAGAATAAA 57.260 33.333 0.00 0.00 0.00 1.40
3097 5012 9.961265 TGGTCACTCATTACGTATAGAATAAAG 57.039 33.333 0.00 0.00 0.00 1.85
3250 5186 9.406828 GAGGAAATAGTTGTAAAAATGTGTTCC 57.593 33.333 0.00 0.00 0.00 3.62
3251 5187 8.919145 AGGAAATAGTTGTAAAAATGTGTTCCA 58.081 29.630 0.00 0.00 33.60 3.53
3293 5229 8.650714 GTTTGCAAATTTCAGGACATATTTCTC 58.349 33.333 16.21 0.00 0.00 2.87
3342 5278 1.001641 GAGTGGGCAATGGCAGAGT 60.002 57.895 9.51 0.00 43.71 3.24
3353 5289 4.437239 CAATGGCAGAGTTACTACAGGAG 58.563 47.826 0.00 0.00 0.00 3.69
3360 5296 3.090037 GAGTTACTACAGGAGCCACAGA 58.910 50.000 0.00 0.00 0.00 3.41
3368 5304 1.448540 GGAGCCACAGACCATGACG 60.449 63.158 0.00 0.00 0.00 4.35
3372 5308 0.798776 GCCACAGACCATGACGAAAG 59.201 55.000 0.00 0.00 0.00 2.62
3396 5332 3.378427 ACAACAAGAGCTCAAAAGTGTCC 59.622 43.478 17.77 0.00 0.00 4.02
3398 5334 3.471680 ACAAGAGCTCAAAAGTGTCCTC 58.528 45.455 17.77 0.00 0.00 3.71
3401 5337 0.603975 AGCTCAAAAGTGTCCTCGGC 60.604 55.000 0.00 0.00 0.00 5.54
3403 5339 1.884235 CTCAAAAGTGTCCTCGGCTT 58.116 50.000 0.00 0.00 0.00 4.35
3404 5340 1.532868 CTCAAAAGTGTCCTCGGCTTG 59.467 52.381 0.00 0.00 0.00 4.01
3440 5376 1.557099 ACTCCGACATCAACCAGCTA 58.443 50.000 0.00 0.00 0.00 3.32
3464 5400 2.839486 ATCTCCAAGCAGTCGTCAAA 57.161 45.000 0.00 0.00 0.00 2.69
3543 5479 0.618458 GAAGATACAGGGCCACACCA 59.382 55.000 6.18 0.00 42.05 4.17
3582 5518 3.800685 CTGGTGAACGTGTGGGCGA 62.801 63.158 0.00 0.00 35.59 5.54
3607 5543 4.662961 CGACGCTGAGGTGTGGCA 62.663 66.667 0.00 0.00 36.19 4.92
3611 5547 2.431683 GCTGAGGTGTGGCAGGAA 59.568 61.111 0.00 0.00 32.83 3.36
3645 5581 2.581354 CGGAGAGGTTCCTGCAGG 59.419 66.667 27.87 27.87 44.41 4.85
3649 5585 2.232298 GAGAGGTTCCTGCAGGACGG 62.232 65.000 35.26 9.49 45.39 4.79
3650 5586 2.203788 AGGTTCCTGCAGGACGGA 60.204 61.111 35.26 18.61 45.39 4.69
3652 5588 2.741092 GTTCCTGCAGGACGGACA 59.259 61.111 35.26 17.79 45.39 4.02
3653 5589 1.374758 GTTCCTGCAGGACGGACAG 60.375 63.158 35.26 5.39 45.39 3.51
3679 5615 4.699522 GAGTTTCCAGGGCGCGGT 62.700 66.667 8.83 0.00 0.00 5.68
3764 5700 0.820891 GGATGATCCACGCCATGCTT 60.821 55.000 6.60 0.00 36.28 3.91
3774 5710 4.189188 CCATGCTTGGCTCGCTGC 62.189 66.667 5.58 0.00 35.85 5.25
3822 5758 0.613853 CGAGGTGGAGGGAAGTGGTA 60.614 60.000 0.00 0.00 0.00 3.25
3906 5842 1.344114 GCAGGAGAATCTGAGGGCTAG 59.656 57.143 0.00 0.00 36.93 3.42
3975 5911 3.878699 TGCATGTCTGGTGTGCATATAAG 59.121 43.478 0.00 0.00 43.30 1.73
3987 5923 6.578545 GGTGTGCATATAAGCGAATAAATGTG 59.421 38.462 0.00 0.00 37.31 3.21
3999 5935 4.380444 CGAATAAATGTGGTGGGAAACAGG 60.380 45.833 0.00 0.00 0.00 4.00
4092 6029 3.067106 CTGTTCGTGTATTGTTCTGCCT 58.933 45.455 0.00 0.00 0.00 4.75
4095 6032 3.610040 TCGTGTATTGTTCTGCCTGAT 57.390 42.857 0.00 0.00 0.00 2.90
4100 6037 5.562696 CGTGTATTGTTCTGCCTGATTTGTT 60.563 40.000 0.00 0.00 0.00 2.83
4101 6038 6.215845 GTGTATTGTTCTGCCTGATTTGTTT 58.784 36.000 0.00 0.00 0.00 2.83
4183 6121 6.883217 TGCACCAAATTATTTACCATGCAAAT 59.117 30.769 11.96 8.15 37.59 2.32
4184 6122 7.392673 TGCACCAAATTATTTACCATGCAAATT 59.607 29.630 11.96 0.00 37.59 1.82
4185 6123 8.242739 GCACCAAATTATTTACCATGCAAATTT 58.757 29.630 8.32 0.00 0.00 1.82
4241 6180 1.191489 TTGACCGGGTGCAGATGAGA 61.191 55.000 3.30 0.00 0.00 3.27
4251 6190 0.251354 GCAGATGAGACTGGGCTCAA 59.749 55.000 10.37 0.00 46.94 3.02
4267 6206 3.888930 GGCTCAAAAATGGATATTCGGGA 59.111 43.478 0.00 0.00 0.00 5.14
4303 6250 1.067283 AGAGCACCTCAATCACTCACG 60.067 52.381 0.00 0.00 32.06 4.35
4381 6328 7.461182 TGTCCATTTATTTTTGTCACCCTAG 57.539 36.000 0.00 0.00 0.00 3.02
4448 6395 2.674563 TATCCGCTCCAAATGCCCGG 62.675 60.000 0.00 0.00 40.25 5.73
4449 6396 4.794648 CCGCTCCAAATGCCCGGA 62.795 66.667 0.73 0.00 41.34 5.14
4465 6412 3.050275 GACGGCTTGCCAGGTCAC 61.050 66.667 12.45 0.00 0.00 3.67
4474 6421 3.476386 CCAGGTCACTGTCTGGCT 58.524 61.111 1.58 0.00 43.22 4.75
4481 6428 3.067833 GGTCACTGTCTGGCTAGAAAAC 58.932 50.000 0.00 0.00 34.01 2.43
4494 6441 0.535102 AGAAAACAGTCACCCAGCCG 60.535 55.000 0.00 0.00 0.00 5.52
4517 6464 2.264480 GGCAAATCCGGCCCAAAC 59.736 61.111 0.00 0.00 45.87 2.93
4520 6467 2.598985 AAATCCGGCCCAAACGCA 60.599 55.556 0.00 0.00 0.00 5.24
4521 6468 1.981853 AAATCCGGCCCAAACGCAT 60.982 52.632 0.00 0.00 0.00 4.73
4522 6469 2.224495 AAATCCGGCCCAAACGCATG 62.224 55.000 0.00 0.00 0.00 4.06
4553 6500 1.378119 CTTCCCCTACCCAAACGCC 60.378 63.158 0.00 0.00 0.00 5.68
4563 6510 3.943034 CAAACGCCCGAACGCACA 61.943 61.111 0.00 0.00 36.19 4.57
4592 6539 1.636988 CCGCCTTGTAGAACTAACCG 58.363 55.000 0.00 0.00 0.00 4.44
4606 6553 0.323302 TAACCGCAAGAGCCATCACA 59.677 50.000 0.00 0.00 43.02 3.58
4616 6563 3.015293 GCCATCACAGACACACGCG 62.015 63.158 3.53 3.53 0.00 6.01
4626 6573 0.584396 GACACACGCGGAAACAATCA 59.416 50.000 12.47 0.00 0.00 2.57
4630 6577 0.165944 CACGCGGAAACAATCAGTCC 59.834 55.000 12.47 0.00 0.00 3.85
4637 6584 1.401905 GAAACAATCAGTCCGATGGGC 59.598 52.381 0.00 0.00 33.40 5.36
4654 6601 1.429423 GCGCCTCCTCCATTTTTCG 59.571 57.895 0.00 0.00 0.00 3.46
4665 6612 1.533625 CATTTTTCGAGGAGGTGCCA 58.466 50.000 0.00 0.00 40.02 4.92
4682 6629 1.302511 CACCCAAGGGACCAAGTCG 60.303 63.158 13.15 0.00 38.96 4.18
4683 6630 1.460689 ACCCAAGGGACCAAGTCGA 60.461 57.895 13.15 0.00 38.96 4.20
4704 6651 8.475639 AGTCGAACTATTTAATCCATACAGTGT 58.524 33.333 0.00 0.00 0.00 3.55
4720 6667 4.832608 GTCGGCCCAACCCTAGCG 62.833 72.222 0.00 0.00 33.26 4.26
4724 6671 4.770874 GCCCAACCCTAGCGCGAA 62.771 66.667 12.10 0.00 0.00 4.70
4725 6672 2.511600 CCCAACCCTAGCGCGAAG 60.512 66.667 12.10 6.03 0.00 3.79
4745 6692 3.916544 CCGATCGCAGCCAGCCTA 61.917 66.667 10.32 0.00 41.38 3.93
4746 6693 2.659897 CGATCGCAGCCAGCCTAC 60.660 66.667 0.26 0.00 41.38 3.18
4747 6694 2.280457 GATCGCAGCCAGCCTACC 60.280 66.667 0.00 0.00 41.38 3.18
4748 6695 2.765807 ATCGCAGCCAGCCTACCT 60.766 61.111 0.00 0.00 41.38 3.08
4749 6696 2.707529 GATCGCAGCCAGCCTACCTC 62.708 65.000 0.00 0.00 41.38 3.85
4750 6697 4.537433 CGCAGCCAGCCTACCTCC 62.537 72.222 0.00 0.00 41.38 4.30
4751 6698 4.537433 GCAGCCAGCCTACCTCCG 62.537 72.222 0.00 0.00 37.23 4.63
4752 6699 3.854669 CAGCCAGCCTACCTCCGG 61.855 72.222 0.00 0.00 0.00 5.14
4753 6700 4.075793 AGCCAGCCTACCTCCGGA 62.076 66.667 2.93 2.93 0.00 5.14
4754 6701 2.844839 GCCAGCCTACCTCCGGAT 60.845 66.667 3.57 0.00 0.00 4.18
4755 6702 2.444256 GCCAGCCTACCTCCGGATT 61.444 63.158 3.57 0.00 0.00 3.01
4756 6703 1.984288 GCCAGCCTACCTCCGGATTT 61.984 60.000 3.57 0.00 0.00 2.17
4757 6704 0.179045 CCAGCCTACCTCCGGATTTG 60.179 60.000 3.57 0.00 0.00 2.32
4758 6705 0.541863 CAGCCTACCTCCGGATTTGT 59.458 55.000 3.57 5.56 0.00 2.83
4759 6706 0.831307 AGCCTACCTCCGGATTTGTC 59.169 55.000 3.57 0.00 0.00 3.18
4760 6707 0.529992 GCCTACCTCCGGATTTGTCG 60.530 60.000 3.57 0.00 0.00 4.35
4767 6714 3.799753 CGGATTTGTCGGAGCCAG 58.200 61.111 0.00 0.00 0.00 4.85
4768 6715 1.218047 CGGATTTGTCGGAGCCAGA 59.782 57.895 0.00 0.00 0.00 3.86
4769 6716 0.807667 CGGATTTGTCGGAGCCAGAG 60.808 60.000 0.00 0.00 0.00 3.35
4770 6717 0.462759 GGATTTGTCGGAGCCAGAGG 60.463 60.000 0.00 0.00 0.00 3.69
4771 6718 0.537188 GATTTGTCGGAGCCAGAGGA 59.463 55.000 0.00 0.00 0.00 3.71
4772 6719 0.250513 ATTTGTCGGAGCCAGAGGAC 59.749 55.000 0.00 0.00 0.00 3.85
4773 6720 0.832135 TTTGTCGGAGCCAGAGGACT 60.832 55.000 0.00 0.00 0.00 3.85
4774 6721 0.832135 TTGTCGGAGCCAGAGGACTT 60.832 55.000 0.00 0.00 0.00 3.01
4775 6722 1.216710 GTCGGAGCCAGAGGACTTG 59.783 63.158 0.00 0.00 0.00 3.16
4776 6723 1.984570 TCGGAGCCAGAGGACTTGG 60.985 63.158 0.00 0.00 0.00 3.61
4777 6724 1.984570 CGGAGCCAGAGGACTTGGA 60.985 63.158 0.00 0.00 0.00 3.53
4778 6725 1.904032 GGAGCCAGAGGACTTGGAG 59.096 63.158 0.00 0.00 0.00 3.86
4779 6726 1.621672 GGAGCCAGAGGACTTGGAGG 61.622 65.000 0.00 0.00 0.00 4.30
4780 6727 0.616111 GAGCCAGAGGACTTGGAGGA 60.616 60.000 0.00 0.00 0.00 3.71
4781 6728 0.043940 AGCCAGAGGACTTGGAGGAT 59.956 55.000 0.00 0.00 0.00 3.24
4782 6729 0.179936 GCCAGAGGACTTGGAGGATG 59.820 60.000 0.00 0.00 0.00 3.51
4783 6730 1.871418 CCAGAGGACTTGGAGGATGA 58.129 55.000 0.00 0.00 0.00 2.92
4784 6731 1.761784 CCAGAGGACTTGGAGGATGAG 59.238 57.143 0.00 0.00 0.00 2.90
4785 6732 1.761784 CAGAGGACTTGGAGGATGAGG 59.238 57.143 0.00 0.00 0.00 3.86
4786 6733 1.648568 AGAGGACTTGGAGGATGAGGA 59.351 52.381 0.00 0.00 0.00 3.71
4787 6734 2.038659 GAGGACTTGGAGGATGAGGAG 58.961 57.143 0.00 0.00 0.00 3.69
4788 6735 1.127343 GGACTTGGAGGATGAGGAGG 58.873 60.000 0.00 0.00 0.00 4.30
4789 6736 1.343478 GGACTTGGAGGATGAGGAGGA 60.343 57.143 0.00 0.00 0.00 3.71
4790 6737 2.038659 GACTTGGAGGATGAGGAGGAG 58.961 57.143 0.00 0.00 0.00 3.69
4791 6738 1.343884 ACTTGGAGGATGAGGAGGAGG 60.344 57.143 0.00 0.00 0.00 4.30
4792 6739 1.018840 TTGGAGGATGAGGAGGAGGA 58.981 55.000 0.00 0.00 0.00 3.71
4793 6740 0.560193 TGGAGGATGAGGAGGAGGAG 59.440 60.000 0.00 0.00 0.00 3.69
4794 6741 0.178935 GGAGGATGAGGAGGAGGAGG 60.179 65.000 0.00 0.00 0.00 4.30
4795 6742 0.856982 GAGGATGAGGAGGAGGAGGA 59.143 60.000 0.00 0.00 0.00 3.71
4796 6743 0.859760 AGGATGAGGAGGAGGAGGAG 59.140 60.000 0.00 0.00 0.00 3.69
4797 6744 0.178935 GGATGAGGAGGAGGAGGAGG 60.179 65.000 0.00 0.00 0.00 4.30
4798 6745 0.856982 GATGAGGAGGAGGAGGAGGA 59.143 60.000 0.00 0.00 0.00 3.71
4799 6746 0.859760 ATGAGGAGGAGGAGGAGGAG 59.140 60.000 0.00 0.00 0.00 3.69
4800 6747 1.292941 TGAGGAGGAGGAGGAGGAGG 61.293 65.000 0.00 0.00 0.00 4.30
4801 6748 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
4802 6749 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
4803 6750 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
4804 6751 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
4805 6752 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
4806 6753 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
4807 6754 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
4808 6755 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
4809 6756 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
4810 6757 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
4811 6758 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
4812 6759 1.293683 GGAGGAGGAGGAGGAGGAGT 61.294 65.000 0.00 0.00 0.00 3.85
4813 6760 1.525175 GAGGAGGAGGAGGAGGAGTA 58.475 60.000 0.00 0.00 0.00 2.59
4814 6761 1.423921 GAGGAGGAGGAGGAGGAGTAG 59.576 61.905 0.00 0.00 0.00 2.57
4815 6762 0.481128 GGAGGAGGAGGAGGAGTAGG 59.519 65.000 0.00 0.00 0.00 3.18
4816 6763 0.178973 GAGGAGGAGGAGGAGTAGGC 60.179 65.000 0.00 0.00 0.00 3.93
4817 6764 1.529713 GGAGGAGGAGGAGTAGGCG 60.530 68.421 0.00 0.00 0.00 5.52
4818 6765 1.529713 GAGGAGGAGGAGTAGGCGG 60.530 68.421 0.00 0.00 0.00 6.13
4819 6766 1.997256 GAGGAGGAGGAGTAGGCGGA 61.997 65.000 0.00 0.00 0.00 5.54
4820 6767 1.529713 GGAGGAGGAGTAGGCGGAG 60.530 68.421 0.00 0.00 0.00 4.63
4821 6768 1.529713 GAGGAGGAGTAGGCGGAGG 60.530 68.421 0.00 0.00 0.00 4.30
4822 6769 1.997256 GAGGAGGAGTAGGCGGAGGA 61.997 65.000 0.00 0.00 0.00 3.71
4823 6770 1.529713 GGAGGAGTAGGCGGAGGAG 60.530 68.421 0.00 0.00 0.00 3.69
4824 6771 1.529713 GAGGAGTAGGCGGAGGAGG 60.530 68.421 0.00 0.00 0.00 4.30
4825 6772 1.997256 GAGGAGTAGGCGGAGGAGGA 61.997 65.000 0.00 0.00 0.00 3.71
4826 6773 1.529713 GGAGTAGGCGGAGGAGGAG 60.530 68.421 0.00 0.00 0.00 3.69
4827 6774 2.123640 AGTAGGCGGAGGAGGAGC 60.124 66.667 0.00 0.00 0.00 4.70
4832 6779 3.535962 GCGGAGGAGGAGCCAGAG 61.536 72.222 0.00 0.00 40.02 3.35
4833 6780 3.535962 CGGAGGAGGAGCCAGAGC 61.536 72.222 0.00 0.00 40.02 4.09
4845 6792 3.205395 CAGAGCTGGACGAGGAGG 58.795 66.667 0.00 0.00 0.00 4.30
4846 6793 1.379176 CAGAGCTGGACGAGGAGGA 60.379 63.158 0.00 0.00 0.00 3.71
4847 6794 0.754957 CAGAGCTGGACGAGGAGGAT 60.755 60.000 0.00 0.00 0.00 3.24
4848 6795 0.754957 AGAGCTGGACGAGGAGGATG 60.755 60.000 0.00 0.00 0.00 3.51
4849 6796 2.107953 GCTGGACGAGGAGGATGC 59.892 66.667 0.00 0.00 0.00 3.91
4850 6797 2.415010 CTGGACGAGGAGGATGCG 59.585 66.667 0.00 0.00 0.00 4.73
4851 6798 3.144120 CTGGACGAGGAGGATGCGG 62.144 68.421 0.00 0.00 0.00 5.69
4852 6799 3.148279 GGACGAGGAGGATGCGGT 61.148 66.667 0.00 0.00 0.00 5.68
4853 6800 2.413765 GACGAGGAGGATGCGGTC 59.586 66.667 0.00 0.00 0.00 4.79
4861 6808 2.764128 GGATGCGGTCCTGGAGGA 60.764 66.667 0.00 0.00 44.16 3.71
4869 6816 2.042762 TCCTGGAGGATGTGGGGG 59.957 66.667 0.00 0.00 39.78 5.40
4870 6817 2.042762 CCTGGAGGATGTGGGGGA 59.957 66.667 0.00 0.00 37.39 4.81
4871 6818 2.074948 CCTGGAGGATGTGGGGGAG 61.075 68.421 0.00 0.00 37.39 4.30
4872 6819 2.042762 TGGAGGATGTGGGGGAGG 59.957 66.667 0.00 0.00 0.00 4.30
4873 6820 2.372688 GGAGGATGTGGGGGAGGA 59.627 66.667 0.00 0.00 0.00 3.71
4874 6821 1.768077 GGAGGATGTGGGGGAGGAG 60.768 68.421 0.00 0.00 0.00 3.69
4875 6822 1.768077 GAGGATGTGGGGGAGGAGG 60.768 68.421 0.00 0.00 0.00 4.30
4876 6823 2.257541 GAGGATGTGGGGGAGGAGGA 62.258 65.000 0.00 0.00 0.00 3.71
4877 6824 1.073397 GGATGTGGGGGAGGAGGAT 60.073 63.158 0.00 0.00 0.00 3.24
4878 6825 1.422161 GGATGTGGGGGAGGAGGATG 61.422 65.000 0.00 0.00 0.00 3.51
4879 6826 2.061790 GATGTGGGGGAGGAGGATGC 62.062 65.000 0.00 0.00 0.00 3.91
4880 6827 2.692368 GTGGGGGAGGAGGATGCA 60.692 66.667 0.00 0.00 0.00 3.96
4881 6828 2.367377 TGGGGGAGGAGGATGCAG 60.367 66.667 0.00 0.00 0.00 4.41
4882 6829 2.040464 GGGGGAGGAGGATGCAGA 60.040 66.667 0.00 0.00 0.00 4.26
4883 6830 1.463018 GGGGGAGGAGGATGCAGAT 60.463 63.158 0.00 0.00 0.00 2.90
4884 6831 1.487850 GGGGGAGGAGGATGCAGATC 61.488 65.000 0.00 0.00 0.00 2.75
4891 6838 4.445699 GGATGCAGATCCGACACC 57.554 61.111 0.00 0.00 39.04 4.16
4892 6839 1.826024 GGATGCAGATCCGACACCT 59.174 57.895 0.00 0.00 39.04 4.00
4893 6840 0.249657 GGATGCAGATCCGACACCTC 60.250 60.000 0.00 0.00 39.04 3.85
4894 6841 0.249657 GATGCAGATCCGACACCTCC 60.250 60.000 0.00 0.00 0.00 4.30
4895 6842 2.021068 ATGCAGATCCGACACCTCCG 62.021 60.000 0.00 0.00 0.00 4.63
4897 6844 3.148279 AGATCCGACACCTCCGGC 61.148 66.667 0.00 0.00 46.10 6.13
4898 6845 3.148279 GATCCGACACCTCCGGCT 61.148 66.667 0.00 0.00 46.10 5.52
4899 6846 1.826921 GATCCGACACCTCCGGCTA 60.827 63.158 0.00 0.00 46.10 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.515330 ACCTTATCATTGCAGCAAAGC 57.485 42.857 12.97 0.00 0.00 3.51
48 57 0.947244 AAGGTTTTGTCTCAGCAGCG 59.053 50.000 0.00 0.00 0.00 5.18
49 58 4.773323 ATAAAGGTTTTGTCTCAGCAGC 57.227 40.909 0.00 0.00 0.00 5.25
50 59 6.566197 AGAATAAAGGTTTTGTCTCAGCAG 57.434 37.500 0.00 0.00 0.00 4.24
51 60 6.321181 ACAAGAATAAAGGTTTTGTCTCAGCA 59.679 34.615 0.00 0.00 0.00 4.41
52 61 6.739112 ACAAGAATAAAGGTTTTGTCTCAGC 58.261 36.000 0.00 0.00 0.00 4.26
53 62 8.836413 TGTACAAGAATAAAGGTTTTGTCTCAG 58.164 33.333 0.00 0.00 34.22 3.35
54 63 8.740123 TGTACAAGAATAAAGGTTTTGTCTCA 57.260 30.769 0.00 0.00 34.22 3.27
55 64 8.837389 ACTGTACAAGAATAAAGGTTTTGTCTC 58.163 33.333 0.00 0.00 34.22 3.36
56 65 8.747538 ACTGTACAAGAATAAAGGTTTTGTCT 57.252 30.769 0.00 0.00 34.22 3.41
57 66 9.874215 GTACTGTACAAGAATAAAGGTTTTGTC 57.126 33.333 12.89 0.00 34.22 3.18
58 67 9.623000 AGTACTGTACAAGAATAAAGGTTTTGT 57.377 29.630 19.27 0.00 36.15 2.83
91 100 3.593096 TGCATGCACTGTCTCTTAGAAG 58.407 45.455 18.46 0.00 0.00 2.85
93 102 3.528532 CATGCATGCACTGTCTCTTAGA 58.471 45.455 25.37 0.00 0.00 2.10
115 124 2.456989 CAGCGAATAAAGGCAAGCATG 58.543 47.619 0.00 0.00 0.00 4.06
143 152 7.848223 TCACATTCCATACATCTAACAACTG 57.152 36.000 0.00 0.00 0.00 3.16
174 183 3.403057 CACTCCACGCGTTGGTCG 61.403 66.667 10.22 12.51 46.97 4.79
181 190 1.654105 GTAAGAATCACACTCCACGCG 59.346 52.381 3.53 3.53 0.00 6.01
211 220 3.801594 GTGTGAACAATCGGCAATTTGTT 59.198 39.130 9.12 9.12 0.00 2.83
212 221 3.380142 GTGTGAACAATCGGCAATTTGT 58.620 40.909 0.00 0.00 0.00 2.83
228 237 6.438259 TTTTTGTTTTATCTGACGGTGTGA 57.562 33.333 0.00 0.00 0.00 3.58
256 265 5.357314 TGTGTTTAAAGGAAACCGTGAATGA 59.643 36.000 0.00 0.00 45.94 2.57
321 330 5.843421 AGAAAGATATGGCTCAGTATCACCT 59.157 40.000 0.00 0.00 31.29 4.00
350 372 5.239744 TGAAGTTGTATCGCTTGCCTTTTTA 59.760 36.000 0.00 0.00 0.00 1.52
438 461 7.428020 TCACCAAATTGAGATGAAAAAGTCAG 58.572 34.615 0.00 0.00 40.43 3.51
468 491 7.962995 AGAGATATCACTGTCCTTCTAACAA 57.037 36.000 5.32 0.00 0.00 2.83
469 492 8.904834 GTTAGAGATATCACTGTCCTTCTAACA 58.095 37.037 21.01 0.12 37.10 2.41
470 493 8.354426 GGTTAGAGATATCACTGTCCTTCTAAC 58.646 40.741 19.29 19.29 36.68 2.34
472 495 7.005296 GGGTTAGAGATATCACTGTCCTTCTA 58.995 42.308 12.39 2.11 0.00 2.10
473 496 5.836358 GGGTTAGAGATATCACTGTCCTTCT 59.164 44.000 12.39 3.01 0.00 2.85
476 499 4.896482 GTGGGTTAGAGATATCACTGTCCT 59.104 45.833 12.39 0.00 0.00 3.85
477 500 4.039366 GGTGGGTTAGAGATATCACTGTCC 59.961 50.000 12.39 12.80 0.00 4.02
479 502 4.620723 TGGTGGGTTAGAGATATCACTGT 58.379 43.478 12.39 0.00 0.00 3.55
480 503 4.039730 CCTGGTGGGTTAGAGATATCACTG 59.960 50.000 12.39 0.00 0.00 3.66
481 504 4.078571 TCCTGGTGGGTTAGAGATATCACT 60.079 45.833 7.83 7.83 36.25 3.41
483 506 4.552883 TCCTGGTGGGTTAGAGATATCA 57.447 45.455 5.32 0.00 36.25 2.15
484 507 5.544176 TGAATCCTGGTGGGTTAGAGATATC 59.456 44.000 0.00 0.00 36.67 1.63
485 508 5.476983 TGAATCCTGGTGGGTTAGAGATAT 58.523 41.667 0.00 0.00 36.67 1.63
486 509 4.890988 TGAATCCTGGTGGGTTAGAGATA 58.109 43.478 0.00 0.00 36.67 1.98
488 511 3.199442 TGAATCCTGGTGGGTTAGAGA 57.801 47.619 0.00 0.00 36.67 3.10
489 512 4.301072 TTTGAATCCTGGTGGGTTAGAG 57.699 45.455 0.00 0.00 36.67 2.43
490 513 4.105697 AGTTTTGAATCCTGGTGGGTTAGA 59.894 41.667 0.00 0.00 36.67 2.10
491 514 4.407365 AGTTTTGAATCCTGGTGGGTTAG 58.593 43.478 0.00 0.00 36.67 2.34
492 515 4.463050 AGTTTTGAATCCTGGTGGGTTA 57.537 40.909 0.00 0.00 36.67 2.85
493 516 3.328535 AGTTTTGAATCCTGGTGGGTT 57.671 42.857 0.00 0.00 39.88 4.11
500 536 4.409570 CGAGCATCAAGTTTTGAATCCTG 58.590 43.478 0.00 0.00 43.95 3.86
502 538 3.174375 GCGAGCATCAAGTTTTGAATCC 58.826 45.455 0.00 0.00 43.95 3.01
504 540 3.921119 TGCGAGCATCAAGTTTTGAAT 57.079 38.095 0.00 0.00 43.95 2.57
510 546 4.970662 ACAATAATGCGAGCATCAAGTT 57.029 36.364 11.26 0.00 35.31 2.66
511 547 4.665212 CAACAATAATGCGAGCATCAAGT 58.335 39.130 11.26 5.49 35.31 3.16
513 549 3.119566 TGCAACAATAATGCGAGCATCAA 60.120 39.130 11.26 3.47 46.76 2.57
514 550 2.422832 TGCAACAATAATGCGAGCATCA 59.577 40.909 11.26 0.00 46.76 3.07
517 553 2.083002 TCTGCAACAATAATGCGAGCA 58.917 42.857 0.00 0.00 46.76 4.26
521 557 5.285845 TCGAAAATTCTGCAACAATAATGCG 59.714 36.000 0.00 0.00 46.76 4.73
530 566 3.599514 CACATCGTCGAAAATTCTGCAAC 59.400 43.478 0.00 0.00 0.00 4.17
531 567 3.809234 CACATCGTCGAAAATTCTGCAA 58.191 40.909 0.00 0.00 0.00 4.08
554 599 2.996621 CGAACATCTCCTTCCACTGAAC 59.003 50.000 0.00 0.00 0.00 3.18
556 601 2.029020 CACGAACATCTCCTTCCACTGA 60.029 50.000 0.00 0.00 0.00 3.41
559 604 2.338500 GACACGAACATCTCCTTCCAC 58.662 52.381 0.00 0.00 0.00 4.02
563 608 1.887198 AGTCGACACGAACATCTCCTT 59.113 47.619 19.50 0.00 37.72 3.36
564 609 1.535833 AGTCGACACGAACATCTCCT 58.464 50.000 19.50 0.00 37.72 3.69
566 611 2.093310 TCGTAGTCGACACGAACATCTC 59.907 50.000 28.39 0.00 44.79 2.75
570 615 0.514255 CCTCGTAGTCGACACGAACA 59.486 55.000 29.30 16.57 46.76 3.18
575 620 2.576317 GCGCCTCGTAGTCGACAC 60.576 66.667 19.50 12.61 41.35 3.67
576 621 2.404186 ATGCGCCTCGTAGTCGACA 61.404 57.895 19.50 0.48 41.35 4.35
589 634 4.465512 CGAAGCCACCACATGCGC 62.466 66.667 0.00 0.00 0.00 6.09
620 665 8.317891 TCTTCAAGAGACTGAGTCGATATATC 57.682 38.462 6.99 2.34 37.67 1.63
621 666 8.729756 CATCTTCAAGAGACTGAGTCGATATAT 58.270 37.037 6.99 0.00 37.17 0.86
625 670 4.704540 ACATCTTCAAGAGACTGAGTCGAT 59.295 41.667 6.99 0.00 37.17 3.59
629 674 8.474025 CCTATAAACATCTTCAAGAGACTGAGT 58.526 37.037 0.00 0.00 37.17 3.41
632 677 6.989169 CCCCTATAAACATCTTCAAGAGACTG 59.011 42.308 0.00 0.00 37.17 3.51
639 684 5.974370 ACCCTACCCCTATAAACATCTTCAA 59.026 40.000 0.00 0.00 0.00 2.69
642 687 6.669631 CAAACCCTACCCCTATAAACATCTT 58.330 40.000 0.00 0.00 0.00 2.40
645 690 4.230964 TGCAAACCCTACCCCTATAAACAT 59.769 41.667 0.00 0.00 0.00 2.71
648 693 4.230964 ACATGCAAACCCTACCCCTATAAA 59.769 41.667 0.00 0.00 0.00 1.40
650 695 3.137544 CACATGCAAACCCTACCCCTATA 59.862 47.826 0.00 0.00 0.00 1.31
656 701 4.013728 TGAATACACATGCAAACCCTACC 58.986 43.478 0.00 0.00 0.00 3.18
657 702 5.835113 ATGAATACACATGCAAACCCTAC 57.165 39.130 0.00 0.00 0.00 3.18
664 709 5.939447 TCATCCCTATGAATACACATGCAA 58.061 37.500 0.00 0.00 39.20 4.08
674 719 5.555017 GTGCATACACTCATCCCTATGAAT 58.445 41.667 0.00 0.00 41.57 2.57
711 756 5.539582 TTTTAACACAGTATAGCCGCAAG 57.460 39.130 0.00 0.00 0.00 4.01
785 833 8.792633 TCTGTATCAGTTTATTTTTGGACCAAG 58.207 33.333 7.07 0.00 32.61 3.61
815 1687 3.283684 CCGTTGCTGTCGCCCAAA 61.284 61.111 0.00 0.00 34.43 3.28
818 1690 4.980805 TCACCGTTGCTGTCGCCC 62.981 66.667 0.00 0.00 34.43 6.13
840 1865 0.174162 GACATGGCTCATTGTTGGCC 59.826 55.000 0.00 0.00 45.45 5.36
887 1912 1.140161 GGTGCTGCCGTACGTGATA 59.860 57.895 15.21 0.00 0.00 2.15
896 1923 1.295357 TTAATCACGTGGTGCTGCCG 61.295 55.000 17.00 0.00 41.21 5.69
932 2662 6.921914 ACGTGTATTTATAGAGAGCCATACC 58.078 40.000 0.00 0.00 0.00 2.73
997 2738 3.185455 ACACTAGGAAGAAGGCCATCTT 58.815 45.455 22.76 22.76 42.24 2.40
1040 2785 5.163723 TGGAAAGCATAAGAAATGAAGAGCG 60.164 40.000 0.00 0.00 0.00 5.03
1045 2790 5.622914 GCAGCTGGAAAGCATAAGAAATGAA 60.623 40.000 17.12 0.00 37.25 2.57
1048 2793 4.021916 AGCAGCTGGAAAGCATAAGAAAT 58.978 39.130 17.12 0.00 37.25 2.17
1049 2794 3.424703 AGCAGCTGGAAAGCATAAGAAA 58.575 40.909 17.12 0.00 37.25 2.52
1053 2798 2.086869 GTGAGCAGCTGGAAAGCATAA 58.913 47.619 17.12 0.00 37.25 1.90
1056 2801 1.601759 GGTGAGCAGCTGGAAAGCA 60.602 57.895 17.12 0.00 37.25 3.91
1059 2804 1.301716 GTCGGTGAGCAGCTGGAAA 60.302 57.895 17.12 0.00 0.00 3.13
1104 2849 4.388499 ATGACCGGAAGCGGCGTT 62.388 61.111 9.46 0.00 0.00 4.84
1179 2924 2.036571 CAAAGGGCCGTACCGTTCC 61.037 63.158 0.00 0.00 45.82 3.62
1651 3418 0.680061 GCCGGGAAGAAGTCGGATAT 59.320 55.000 2.18 0.00 45.96 1.63
1653 3420 2.901042 GCCGGGAAGAAGTCGGAT 59.099 61.111 2.18 0.00 45.96 4.18
1870 3648 5.126061 CCCTCATGAAATCCTGGTTAACAAG 59.874 44.000 8.10 5.36 0.00 3.16
1872 3650 4.599041 CCCTCATGAAATCCTGGTTAACA 58.401 43.478 8.10 0.00 0.00 2.41
1922 3700 2.281498 CGATTCGATTATGCACGTGTGT 59.719 45.455 18.38 8.70 0.00 3.72
1952 3735 9.696572 ACTTCCACTCTTTACATATAGTACTCA 57.303 33.333 0.00 0.00 30.91 3.41
1964 3747 5.635417 AGGTACGTACTTCCACTCTTTAC 57.365 43.478 24.07 3.91 0.00 2.01
1966 3749 5.320277 AGTAGGTACGTACTTCCACTCTTT 58.680 41.667 24.07 2.21 28.15 2.52
2027 3810 6.018343 GTCCTCTGCTGTATCAAAAGATTAGC 60.018 42.308 0.00 0.00 0.00 3.09
2039 3822 1.001760 ACCCCGTCCTCTGCTGTAT 59.998 57.895 0.00 0.00 0.00 2.29
2045 3828 2.675423 TCGACACCCCGTCCTCTG 60.675 66.667 0.00 0.00 42.07 3.35
2046 3829 2.675772 GTCGACACCCCGTCCTCT 60.676 66.667 11.55 0.00 42.07 3.69
2047 3830 3.756727 GGTCGACACCCCGTCCTC 61.757 72.222 18.91 0.00 42.07 3.71
2064 3847 3.673484 CAGCTGCCCAACCAACGG 61.673 66.667 0.00 0.00 0.00 4.44
2065 3848 3.673484 CCAGCTGCCCAACCAACG 61.673 66.667 8.66 0.00 0.00 4.10
2066 3849 2.203480 TCCAGCTGCCCAACCAAC 60.203 61.111 8.66 0.00 0.00 3.77
2067 3850 2.115910 CTCCAGCTGCCCAACCAA 59.884 61.111 8.66 0.00 0.00 3.67
2068 3851 2.766925 AACTCCAGCTGCCCAACCA 61.767 57.895 8.66 0.00 0.00 3.67
2069 3852 2.116125 AACTCCAGCTGCCCAACC 59.884 61.111 8.66 0.00 0.00 3.77
2070 3853 2.924105 GCAACTCCAGCTGCCCAAC 61.924 63.158 8.66 0.00 31.39 3.77
2071 3854 1.778017 TAGCAACTCCAGCTGCCCAA 61.778 55.000 8.66 0.00 43.33 4.12
2072 3855 2.223443 TAGCAACTCCAGCTGCCCA 61.223 57.895 8.66 0.00 43.33 5.36
2073 3856 1.746991 GTAGCAACTCCAGCTGCCC 60.747 63.158 8.66 0.00 43.33 5.36
2074 3857 3.896479 GTAGCAACTCCAGCTGCC 58.104 61.111 8.66 0.00 43.33 4.85
2075 3858 1.003355 TGGTAGCAACTCCAGCTGC 60.003 57.895 8.66 0.00 43.33 5.25
2076 3859 3.149899 CTGGTAGCAACTCCAGCTG 57.850 57.895 6.78 6.78 43.45 4.24
2080 3863 2.170607 GGATAAGCTGGTAGCAACTCCA 59.829 50.000 0.00 0.00 45.56 3.86
2081 3864 2.803492 CGGATAAGCTGGTAGCAACTCC 60.803 54.545 0.00 4.89 45.56 3.85
2082 3865 2.100916 TCGGATAAGCTGGTAGCAACTC 59.899 50.000 0.00 0.00 45.56 3.01
2083 3866 2.101582 CTCGGATAAGCTGGTAGCAACT 59.898 50.000 3.43 0.00 45.56 3.16
2084 3867 2.159085 ACTCGGATAAGCTGGTAGCAAC 60.159 50.000 3.43 0.00 45.56 4.17
2085 3868 2.108168 ACTCGGATAAGCTGGTAGCAA 58.892 47.619 3.43 0.00 45.56 3.91
2086 3869 1.776662 ACTCGGATAAGCTGGTAGCA 58.223 50.000 3.43 0.00 45.56 3.49
2087 3870 2.745102 GAACTCGGATAAGCTGGTAGC 58.255 52.381 0.00 0.00 42.84 3.58
2088 3871 2.617308 TCGAACTCGGATAAGCTGGTAG 59.383 50.000 0.00 0.00 40.29 3.18
2089 3872 2.617308 CTCGAACTCGGATAAGCTGGTA 59.383 50.000 0.00 0.00 40.29 3.25
2090 3873 1.405821 CTCGAACTCGGATAAGCTGGT 59.594 52.381 0.00 0.00 40.29 4.00
2091 3874 1.405821 ACTCGAACTCGGATAAGCTGG 59.594 52.381 0.00 0.00 40.29 4.85
2092 3875 2.356382 AGACTCGAACTCGGATAAGCTG 59.644 50.000 0.00 0.00 40.29 4.24
2093 3876 2.645802 AGACTCGAACTCGGATAAGCT 58.354 47.619 0.00 0.00 40.29 3.74
2094 3877 3.109619 CAAGACTCGAACTCGGATAAGC 58.890 50.000 0.00 0.00 40.29 3.09
2095 3878 3.696898 CCAAGACTCGAACTCGGATAAG 58.303 50.000 0.00 0.00 40.29 1.73
2096 3879 2.159282 GCCAAGACTCGAACTCGGATAA 60.159 50.000 0.00 0.00 40.29 1.75
2097 3880 1.404391 GCCAAGACTCGAACTCGGATA 59.596 52.381 0.00 0.00 40.29 2.59
2098 3881 0.173708 GCCAAGACTCGAACTCGGAT 59.826 55.000 0.00 0.00 40.29 4.18
2099 3882 0.894184 AGCCAAGACTCGAACTCGGA 60.894 55.000 0.00 0.00 40.29 4.55
2100 3883 0.456995 GAGCCAAGACTCGAACTCGG 60.457 60.000 0.00 0.00 40.29 4.63
2101 3884 3.022981 GAGCCAAGACTCGAACTCG 57.977 57.895 0.00 0.00 41.45 4.18
2108 3891 2.507324 GCGTCCGAGCCAAGACTC 60.507 66.667 0.00 0.00 0.00 3.36
2109 3892 4.421479 CGCGTCCGAGCCAAGACT 62.421 66.667 0.00 0.00 36.29 3.24
2127 3910 3.479269 GAAACTCCGCGAGCACCG 61.479 66.667 8.23 0.00 42.21 4.94
2128 3911 1.627550 GAAGAAACTCCGCGAGCACC 61.628 60.000 8.23 0.00 32.04 5.01
2129 3912 0.667792 AGAAGAAACTCCGCGAGCAC 60.668 55.000 8.23 0.00 32.04 4.40
2130 3913 0.885879 TAGAAGAAACTCCGCGAGCA 59.114 50.000 8.23 0.00 32.04 4.26
2131 3914 2.211353 ATAGAAGAAACTCCGCGAGC 57.789 50.000 8.23 0.00 32.04 5.03
2132 3915 6.642683 TTTTTATAGAAGAAACTCCGCGAG 57.357 37.500 8.23 5.77 35.52 5.03
2156 3939 1.958579 GGCTAACCCTCGTTGGTTTTT 59.041 47.619 14.77 0.00 46.45 1.94
2157 3940 1.612676 GGCTAACCCTCGTTGGTTTT 58.387 50.000 14.77 2.78 46.45 2.43
2158 3941 3.334413 GGCTAACCCTCGTTGGTTT 57.666 52.632 14.77 1.74 46.45 3.27
2169 3952 0.611062 GACCAACCCAAGGGCTAACC 60.611 60.000 4.70 0.00 39.32 2.85
2170 3953 0.611062 GGACCAACCCAAGGGCTAAC 60.611 60.000 4.70 0.00 39.32 2.34
2171 3954 1.771646 GGACCAACCCAAGGGCTAA 59.228 57.895 4.70 0.00 39.32 3.09
2172 3955 3.503099 GGACCAACCCAAGGGCTA 58.497 61.111 4.70 0.00 39.32 3.93
2222 4005 4.246458 GGAGGTAGTTTTGTGTCAGCTAG 58.754 47.826 0.00 0.00 0.00 3.42
2223 4006 3.007614 GGGAGGTAGTTTTGTGTCAGCTA 59.992 47.826 0.00 0.00 0.00 3.32
2228 4011 5.784578 ATTTTGGGAGGTAGTTTTGTGTC 57.215 39.130 0.00 0.00 0.00 3.67
2329 4125 6.561737 TTGAGCATTTAAATGTCCAACGTA 57.438 33.333 25.15 9.06 38.65 3.57
2744 4575 7.593825 ACTTTCTGTTTAACATATCAACTGGC 58.406 34.615 0.00 0.00 0.00 4.85
2763 4594 9.384764 GGAATTACTCTAATAGCACAACTTTCT 57.615 33.333 0.00 0.00 0.00 2.52
2764 4595 8.328864 CGGAATTACTCTAATAGCACAACTTTC 58.671 37.037 0.00 0.00 0.00 2.62
2765 4596 7.822822 ACGGAATTACTCTAATAGCACAACTTT 59.177 33.333 0.00 0.00 0.00 2.66
2768 4599 6.979238 AGACGGAATTACTCTAATAGCACAAC 59.021 38.462 0.00 0.00 0.00 3.32
2769 4600 7.108841 AGACGGAATTACTCTAATAGCACAA 57.891 36.000 0.00 0.00 0.00 3.33
2771 4602 7.808856 CCTTAGACGGAATTACTCTAATAGCAC 59.191 40.741 8.94 0.00 0.00 4.40
2772 4603 7.722728 TCCTTAGACGGAATTACTCTAATAGCA 59.277 37.037 8.94 0.00 0.00 3.49
2773 4604 8.022550 GTCCTTAGACGGAATTACTCTAATAGC 58.977 40.741 8.94 0.00 34.20 2.97
2792 4624 3.753294 AAGGCCATATGACGTCCTTAG 57.247 47.619 14.12 0.49 35.55 2.18
2840 4672 6.546972 TGTCAAACTAATGTTGATGCGTAA 57.453 33.333 0.00 0.00 36.39 3.18
2844 4676 8.853345 CAATACTTGTCAAACTAATGTTGATGC 58.147 33.333 0.00 0.00 36.39 3.91
2845 4677 9.345517 CCAATACTTGTCAAACTAATGTTGATG 57.654 33.333 0.00 0.00 36.39 3.07
2846 4678 9.077885 ACCAATACTTGTCAAACTAATGTTGAT 57.922 29.630 0.00 0.00 36.39 2.57
2847 4679 8.458573 ACCAATACTTGTCAAACTAATGTTGA 57.541 30.769 0.00 0.00 36.39 3.18
3066 4980 1.343142 ACGTAATGAGTGACCACTGCA 59.657 47.619 7.47 6.15 42.66 4.41
3137 5055 1.814394 GTTACGGAAGGCGGGATTTTT 59.186 47.619 0.00 0.00 0.00 1.94
3146 5064 5.366829 AAAACTACAATGTTACGGAAGGC 57.633 39.130 0.00 0.00 0.00 4.35
3224 5160 9.406828 GGAACACATTTTTACAACTATTTCCTC 57.593 33.333 0.00 0.00 0.00 3.71
3230 5166 7.283625 TGCTGGAACACATTTTTACAACTAT 57.716 32.000 0.00 0.00 0.00 2.12
3233 5169 6.843069 ATTGCTGGAACACATTTTTACAAC 57.157 33.333 0.00 0.00 0.00 3.32
3265 5201 9.638239 GAAATATGTCCTGAAATTTGCAAACTA 57.362 29.630 15.41 0.26 0.00 2.24
3342 5278 2.176889 GGTCTGTGGCTCCTGTAGTAA 58.823 52.381 0.00 0.00 0.00 2.24
3353 5289 0.798776 CTTTCGTCATGGTCTGTGGC 59.201 55.000 0.00 0.00 0.00 5.01
3360 5296 4.699637 TCTTGTTGTACTTTCGTCATGGT 58.300 39.130 0.00 0.00 0.00 3.55
3368 5304 6.688813 CACTTTTGAGCTCTTGTTGTACTTTC 59.311 38.462 16.19 0.00 0.00 2.62
3372 5308 5.485662 ACACTTTTGAGCTCTTGTTGTAC 57.514 39.130 16.19 0.00 0.00 2.90
3396 5332 2.720758 CGTGCGTCTTCAAGCCGAG 61.721 63.158 0.00 0.00 31.91 4.63
3398 5334 3.000080 GACGTGCGTCTTCAAGCCG 62.000 63.158 16.33 0.00 41.57 5.52
3401 5337 1.060713 ATTCGACGTGCGTCTTCAAG 58.939 50.000 20.19 6.68 42.54 3.02
3403 5339 1.198408 AGTATTCGACGTGCGTCTTCA 59.802 47.619 20.19 6.51 42.54 3.02
3404 5340 1.838943 GAGTATTCGACGTGCGTCTTC 59.161 52.381 20.19 7.83 42.54 2.87
3432 5368 2.868964 TGGAGATAGGGTAGCTGGTT 57.131 50.000 0.00 0.00 0.00 3.67
3440 5376 1.115467 CGACTGCTTGGAGATAGGGT 58.885 55.000 0.00 0.00 0.00 4.34
3521 5457 1.279271 GTGTGGCCCTGTATCTTCACT 59.721 52.381 0.00 0.00 0.00 3.41
3596 5532 2.836154 GGTTCCTGCCACACCTCA 59.164 61.111 0.00 0.00 0.00 3.86
3601 5537 0.817634 CTTGTTCGGTTCCTGCCACA 60.818 55.000 0.00 0.00 0.00 4.17
3607 5543 2.552373 GGGATGAACTTGTTCGGTTCCT 60.552 50.000 19.59 0.00 41.42 3.36
3611 5547 0.321298 CCGGGATGAACTTGTTCGGT 60.321 55.000 8.68 0.90 0.00 4.69
3645 5581 1.304217 TCACCTCCTCCTGTCCGTC 60.304 63.158 0.00 0.00 0.00 4.79
3649 5585 1.276705 GGAAACTCACCTCCTCCTGTC 59.723 57.143 0.00 0.00 0.00 3.51
3650 5586 1.353091 GGAAACTCACCTCCTCCTGT 58.647 55.000 0.00 0.00 0.00 4.00
3652 5588 1.650528 CTGGAAACTCACCTCCTCCT 58.349 55.000 0.00 0.00 32.51 3.69
3653 5589 0.615850 CCTGGAAACTCACCTCCTCC 59.384 60.000 0.00 0.00 32.51 4.30
3654 5590 0.615850 CCCTGGAAACTCACCTCCTC 59.384 60.000 0.00 0.00 32.51 3.71
3740 5676 1.224592 GGCGTGGATCATCCTGGTT 59.775 57.895 4.96 0.00 37.46 3.67
3774 5710 0.590195 GTCCACTCAAAGCAGTGCAG 59.410 55.000 19.20 8.32 42.29 4.41
3822 5758 3.071602 CCAACCTTCTCCGACATATCCAT 59.928 47.826 0.00 0.00 0.00 3.41
3906 5842 1.328279 AAGTACACCCAAAGCCAAGC 58.672 50.000 0.00 0.00 0.00 4.01
3975 5911 3.057174 TGTTTCCCACCACATTTATTCGC 60.057 43.478 0.00 0.00 0.00 4.70
3987 5923 7.742767 ACATTATATACTACCTGTTTCCCACC 58.257 38.462 0.00 0.00 0.00 4.61
4015 5951 4.390297 GCATCTAATTTCCATCGAGGTAGC 59.610 45.833 0.00 0.00 39.02 3.58
4052 5988 9.498176 ACGAACAGTAAATATTTTTACAGACCT 57.502 29.630 17.53 4.28 46.37 3.85
4065 6002 7.148540 GGCAGAACAATACACGAACAGTAAATA 60.149 37.037 0.00 0.00 0.00 1.40
4127 6064 5.404946 CGCTTCAAATTCAGATCATTTGGT 58.595 37.500 13.91 0.00 40.58 3.67
4220 6159 1.191489 TCATCTGCACCCGGTCAAGA 61.191 55.000 0.00 0.00 0.00 3.02
4241 6180 4.339247 CGAATATCCATTTTTGAGCCCAGT 59.661 41.667 0.00 0.00 0.00 4.00
4251 6190 8.100164 ACAACAATTTTCCCGAATATCCATTTT 58.900 29.630 0.00 0.00 0.00 1.82
4267 6206 7.112452 AGGTGCTCTAAGAAACAACAATTTT 57.888 32.000 0.00 0.00 0.00 1.82
4411 6358 4.263025 CGGATATGAGGGATCCAATTGTCA 60.263 45.833 15.23 8.15 42.75 3.58
4448 6395 3.050275 GTGACCTGGCAAGCCGTC 61.050 66.667 6.60 9.13 39.42 4.79
4449 6396 3.560251 AGTGACCTGGCAAGCCGT 61.560 61.111 6.60 0.00 39.42 5.68
4459 6406 2.310779 TTCTAGCCAGACAGTGACCT 57.689 50.000 0.00 0.00 0.00 3.85
4465 6412 3.743396 GTGACTGTTTTCTAGCCAGACAG 59.257 47.826 9.57 9.57 32.98 3.51
4474 6421 1.270625 CGGCTGGGTGACTGTTTTCTA 60.271 52.381 0.00 0.00 0.00 2.10
4481 6428 4.394712 GGTCCGGCTGGGTGACTG 62.395 72.222 12.87 0.00 37.00 3.51
4494 6441 3.140814 GCCGGATTTGCCAGGTCC 61.141 66.667 5.05 0.00 35.94 4.46
4520 6467 3.628646 GAAGTGCCGGTCAGCCCAT 62.629 63.158 1.90 0.00 0.00 4.00
4521 6468 4.329545 GAAGTGCCGGTCAGCCCA 62.330 66.667 1.90 0.00 0.00 5.36
4553 6500 3.951332 ACATCTGTGTGCGTTCGG 58.049 55.556 0.00 0.00 37.14 4.30
4563 6510 1.836999 TACAAGGCGGGCACATCTGT 61.837 55.000 3.78 1.83 0.00 3.41
4566 6513 0.392461 TTCTACAAGGCGGGCACATC 60.392 55.000 3.78 0.00 0.00 3.06
4592 6539 0.801251 GTGTCTGTGATGGCTCTTGC 59.199 55.000 0.00 0.00 38.76 4.01
4606 6553 0.865769 GATTGTTTCCGCGTGTGTCT 59.134 50.000 4.92 0.00 0.00 3.41
4616 6563 2.017049 CCCATCGGACTGATTGTTTCC 58.983 52.381 0.00 0.00 34.13 3.13
4637 6584 1.009829 CTCGAAAAATGGAGGAGGCG 58.990 55.000 0.00 0.00 0.00 5.52
4645 6592 0.811281 GGCACCTCCTCGAAAAATGG 59.189 55.000 0.00 0.00 0.00 3.16
4647 6594 1.534729 GTGGCACCTCCTCGAAAAAT 58.465 50.000 6.29 0.00 35.26 1.82
4654 6601 2.352805 CTTGGGTGGCACCTCCTC 59.647 66.667 33.87 18.97 38.64 3.71
4665 6612 1.057851 TTCGACTTGGTCCCTTGGGT 61.058 55.000 5.51 0.00 0.00 4.51
4682 6629 7.307219 GCCGACACTGTATGGATTAAATAGTTC 60.307 40.741 4.45 0.00 0.00 3.01
4683 6630 6.482308 GCCGACACTGTATGGATTAAATAGTT 59.518 38.462 4.45 0.00 0.00 2.24
4728 6675 3.916544 TAGGCTGGCTGCGATCGG 61.917 66.667 18.30 1.65 44.05 4.18
4729 6676 2.659897 GTAGGCTGGCTGCGATCG 60.660 66.667 14.70 11.69 44.05 3.69
4730 6677 2.280457 GGTAGGCTGGCTGCGATC 60.280 66.667 14.70 2.99 44.05 3.69
4731 6678 2.765807 AGGTAGGCTGGCTGCGAT 60.766 61.111 14.70 1.87 44.05 4.58
4732 6679 3.461773 GAGGTAGGCTGGCTGCGA 61.462 66.667 14.70 0.00 44.05 5.10
4733 6680 4.537433 GGAGGTAGGCTGGCTGCG 62.537 72.222 14.70 0.00 44.05 5.18
4734 6681 4.537433 CGGAGGTAGGCTGGCTGC 62.537 72.222 14.70 12.68 41.94 5.25
4750 6697 0.807667 CTCTGGCTCCGACAAATCCG 60.808 60.000 0.00 0.00 0.00 4.18
4751 6698 0.462759 CCTCTGGCTCCGACAAATCC 60.463 60.000 0.00 0.00 0.00 3.01
4752 6699 0.537188 TCCTCTGGCTCCGACAAATC 59.463 55.000 0.00 0.00 0.00 2.17
4753 6700 0.250513 GTCCTCTGGCTCCGACAAAT 59.749 55.000 0.00 0.00 0.00 2.32
4754 6701 0.832135 AGTCCTCTGGCTCCGACAAA 60.832 55.000 0.00 0.00 0.00 2.83
4755 6702 0.832135 AAGTCCTCTGGCTCCGACAA 60.832 55.000 0.00 0.00 0.00 3.18
4756 6703 1.228894 AAGTCCTCTGGCTCCGACA 60.229 57.895 0.00 0.00 0.00 4.35
4757 6704 1.216710 CAAGTCCTCTGGCTCCGAC 59.783 63.158 0.00 0.00 0.00 4.79
4758 6705 1.984570 CCAAGTCCTCTGGCTCCGA 60.985 63.158 0.00 0.00 0.00 4.55
4759 6706 1.954362 CTCCAAGTCCTCTGGCTCCG 61.954 65.000 0.00 0.00 0.00 4.63
4760 6707 1.621672 CCTCCAAGTCCTCTGGCTCC 61.622 65.000 0.00 0.00 0.00 4.70
4761 6708 0.616111 TCCTCCAAGTCCTCTGGCTC 60.616 60.000 0.00 0.00 0.00 4.70
4762 6709 0.043940 ATCCTCCAAGTCCTCTGGCT 59.956 55.000 0.00 0.00 0.00 4.75
4763 6710 0.179936 CATCCTCCAAGTCCTCTGGC 59.820 60.000 0.00 0.00 0.00 4.85
4764 6711 1.761784 CTCATCCTCCAAGTCCTCTGG 59.238 57.143 0.00 0.00 0.00 3.86
4765 6712 1.761784 CCTCATCCTCCAAGTCCTCTG 59.238 57.143 0.00 0.00 0.00 3.35
4766 6713 1.648568 TCCTCATCCTCCAAGTCCTCT 59.351 52.381 0.00 0.00 0.00 3.69
4767 6714 2.038659 CTCCTCATCCTCCAAGTCCTC 58.961 57.143 0.00 0.00 0.00 3.71
4768 6715 1.343884 CCTCCTCATCCTCCAAGTCCT 60.344 57.143 0.00 0.00 0.00 3.85
4769 6716 1.127343 CCTCCTCATCCTCCAAGTCC 58.873 60.000 0.00 0.00 0.00 3.85
4770 6717 2.038659 CTCCTCCTCATCCTCCAAGTC 58.961 57.143 0.00 0.00 0.00 3.01
4771 6718 1.343884 CCTCCTCCTCATCCTCCAAGT 60.344 57.143 0.00 0.00 0.00 3.16
4772 6719 1.062581 TCCTCCTCCTCATCCTCCAAG 60.063 57.143 0.00 0.00 0.00 3.61
4773 6720 1.018840 TCCTCCTCCTCATCCTCCAA 58.981 55.000 0.00 0.00 0.00 3.53
4774 6721 0.560193 CTCCTCCTCCTCATCCTCCA 59.440 60.000 0.00 0.00 0.00 3.86
4775 6722 0.178935 CCTCCTCCTCCTCATCCTCC 60.179 65.000 0.00 0.00 0.00 4.30
4776 6723 0.856982 TCCTCCTCCTCCTCATCCTC 59.143 60.000 0.00 0.00 0.00 3.71
4777 6724 0.859760 CTCCTCCTCCTCCTCATCCT 59.140 60.000 0.00 0.00 0.00 3.24
4778 6725 0.178935 CCTCCTCCTCCTCCTCATCC 60.179 65.000 0.00 0.00 0.00 3.51
4779 6726 0.856982 TCCTCCTCCTCCTCCTCATC 59.143 60.000 0.00 0.00 0.00 2.92
4780 6727 0.859760 CTCCTCCTCCTCCTCCTCAT 59.140 60.000 0.00 0.00 0.00 2.90
4781 6728 1.292941 CCTCCTCCTCCTCCTCCTCA 61.293 65.000 0.00 0.00 0.00 3.86
4782 6729 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
4783 6730 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
4784 6731 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
4785 6732 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
4786 6733 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
4787 6734 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
4788 6735 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
4789 6736 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
4790 6737 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
4791 6738 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
4792 6739 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
4793 6740 1.293683 ACTCCTCCTCCTCCTCCTCC 61.294 65.000 0.00 0.00 0.00 4.30
4794 6741 1.423921 CTACTCCTCCTCCTCCTCCTC 59.576 61.905 0.00 0.00 0.00 3.71
4795 6742 1.529744 CTACTCCTCCTCCTCCTCCT 58.470 60.000 0.00 0.00 0.00 3.69
4796 6743 0.481128 CCTACTCCTCCTCCTCCTCC 59.519 65.000 0.00 0.00 0.00 4.30
4797 6744 0.178973 GCCTACTCCTCCTCCTCCTC 60.179 65.000 0.00 0.00 0.00 3.71
4798 6745 1.935191 GCCTACTCCTCCTCCTCCT 59.065 63.158 0.00 0.00 0.00 3.69
4799 6746 1.529713 CGCCTACTCCTCCTCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
4800 6747 1.529713 CCGCCTACTCCTCCTCCTC 60.530 68.421 0.00 0.00 0.00 3.71
4801 6748 2.002018 CTCCGCCTACTCCTCCTCCT 62.002 65.000 0.00 0.00 0.00 3.69
4802 6749 1.529713 CTCCGCCTACTCCTCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
4803 6750 1.529713 CCTCCGCCTACTCCTCCTC 60.530 68.421 0.00 0.00 0.00 3.71
4804 6751 2.002018 CTCCTCCGCCTACTCCTCCT 62.002 65.000 0.00 0.00 0.00 3.69
4805 6752 1.529713 CTCCTCCGCCTACTCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
4806 6753 1.529713 CCTCCTCCGCCTACTCCTC 60.530 68.421 0.00 0.00 0.00 3.71
4807 6754 2.002018 CTCCTCCTCCGCCTACTCCT 62.002 65.000 0.00 0.00 0.00 3.69
4808 6755 1.529713 CTCCTCCTCCGCCTACTCC 60.530 68.421 0.00 0.00 0.00 3.85
4809 6756 2.197605 GCTCCTCCTCCGCCTACTC 61.198 68.421 0.00 0.00 0.00 2.59
4810 6757 2.123640 GCTCCTCCTCCGCCTACT 60.124 66.667 0.00 0.00 0.00 2.57
4811 6758 3.228017 GGCTCCTCCTCCGCCTAC 61.228 72.222 0.00 0.00 40.62 3.18
4812 6759 3.740495 CTGGCTCCTCCTCCGCCTA 62.740 68.421 0.00 0.00 44.09 3.93
4815 6762 3.535962 CTCTGGCTCCTCCTCCGC 61.536 72.222 0.00 0.00 35.26 5.54
4816 6763 3.535962 GCTCTGGCTCCTCCTCCG 61.536 72.222 0.00 0.00 35.26 4.63
4828 6775 0.754957 ATCCTCCTCGTCCAGCTCTG 60.755 60.000 0.00 0.00 0.00 3.35
4829 6776 0.754957 CATCCTCCTCGTCCAGCTCT 60.755 60.000 0.00 0.00 0.00 4.09
4830 6777 1.739049 CATCCTCCTCGTCCAGCTC 59.261 63.158 0.00 0.00 0.00 4.09
4831 6778 2.430610 GCATCCTCCTCGTCCAGCT 61.431 63.158 0.00 0.00 0.00 4.24
4832 6779 2.107953 GCATCCTCCTCGTCCAGC 59.892 66.667 0.00 0.00 0.00 4.85
4833 6780 2.415010 CGCATCCTCCTCGTCCAG 59.585 66.667 0.00 0.00 0.00 3.86
4834 6781 3.147595 CCGCATCCTCCTCGTCCA 61.148 66.667 0.00 0.00 0.00 4.02
4835 6782 3.140225 GACCGCATCCTCCTCGTCC 62.140 68.421 0.00 0.00 0.00 4.79
4836 6783 2.413765 GACCGCATCCTCCTCGTC 59.586 66.667 0.00 0.00 0.00 4.20
4837 6784 3.148279 GGACCGCATCCTCCTCGT 61.148 66.667 0.00 0.00 45.22 4.18
4853 6800 2.042762 TCCCCCACATCCTCCAGG 59.957 66.667 0.00 0.00 0.00 4.45
4854 6801 2.074948 CCTCCCCCACATCCTCCAG 61.075 68.421 0.00 0.00 0.00 3.86
4855 6802 2.042762 CCTCCCCCACATCCTCCA 59.957 66.667 0.00 0.00 0.00 3.86
4856 6803 1.768077 CTCCTCCCCCACATCCTCC 60.768 68.421 0.00 0.00 0.00 4.30
4857 6804 1.768077 CCTCCTCCCCCACATCCTC 60.768 68.421 0.00 0.00 0.00 3.71
4858 6805 1.617181 ATCCTCCTCCCCCACATCCT 61.617 60.000 0.00 0.00 0.00 3.24
4859 6806 1.073397 ATCCTCCTCCCCCACATCC 60.073 63.158 0.00 0.00 0.00 3.51
4860 6807 2.061790 GCATCCTCCTCCCCCACATC 62.062 65.000 0.00 0.00 0.00 3.06
4861 6808 2.081161 GCATCCTCCTCCCCCACAT 61.081 63.158 0.00 0.00 0.00 3.21
4862 6809 2.692368 GCATCCTCCTCCCCCACA 60.692 66.667 0.00 0.00 0.00 4.17
4863 6810 2.692368 TGCATCCTCCTCCCCCAC 60.692 66.667 0.00 0.00 0.00 4.61
4864 6811 2.275715 ATCTGCATCCTCCTCCCCCA 62.276 60.000 0.00 0.00 0.00 4.96
4865 6812 1.463018 ATCTGCATCCTCCTCCCCC 60.463 63.158 0.00 0.00 0.00 5.40
4866 6813 1.487850 GGATCTGCATCCTCCTCCCC 61.488 65.000 0.00 0.00 45.06 4.81
4867 6814 1.825281 CGGATCTGCATCCTCCTCCC 61.825 65.000 4.86 0.00 46.20 4.30
4868 6815 0.829602 TCGGATCTGCATCCTCCTCC 60.830 60.000 4.86 0.00 46.20 4.30
4869 6816 0.316841 GTCGGATCTGCATCCTCCTC 59.683 60.000 4.86 0.00 46.20 3.71
4870 6817 0.397675 TGTCGGATCTGCATCCTCCT 60.398 55.000 4.86 0.00 46.20 3.69
4871 6818 0.249657 GTGTCGGATCTGCATCCTCC 60.250 60.000 4.86 2.49 46.20 4.30
4872 6819 0.249657 GGTGTCGGATCTGCATCCTC 60.250 60.000 4.86 0.00 46.20 3.71
4873 6820 0.689080 AGGTGTCGGATCTGCATCCT 60.689 55.000 4.86 5.70 46.20 3.24
4874 6821 0.249657 GAGGTGTCGGATCTGCATCC 60.250 60.000 0.00 0.00 45.04 3.51
4875 6822 0.249657 GGAGGTGTCGGATCTGCATC 60.250 60.000 0.00 0.00 0.00 3.91
4876 6823 1.826024 GGAGGTGTCGGATCTGCAT 59.174 57.895 0.00 0.00 0.00 3.96
4877 6824 2.710902 CGGAGGTGTCGGATCTGCA 61.711 63.158 0.00 0.00 0.00 4.41
4878 6825 2.105128 CGGAGGTGTCGGATCTGC 59.895 66.667 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.