Multiple sequence alignment - TraesCS1B01G061200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G061200 chr1B 100.000 6635 0 0 1 6635 45742963 45736329 0.000000e+00 12253
1 TraesCS1B01G061200 chr1A 93.020 5645 269 49 707 6248 29186964 29192586 0.000000e+00 8126
2 TraesCS1B01G061200 chr1A 81.848 617 44 16 2 602 29186228 29186792 2.180000e-124 457
3 TraesCS1B01G061200 chr1A 86.036 222 31 0 4510 4731 72243879 72244100 8.600000e-59 239
4 TraesCS1B01G061200 chr1A 86.567 134 17 1 584 717 29186806 29186938 5.360000e-31 147
5 TraesCS1B01G061200 chr1D 94.225 4000 140 33 1924 5871 28199730 28203690 0.000000e+00 6023
6 TraesCS1B01G061200 chr1D 92.803 1195 58 8 707 1885 28198547 28199729 0.000000e+00 1705
7 TraesCS1B01G061200 chr1D 89.026 729 36 14 1 709 28197736 28198440 0.000000e+00 863
8 TraesCS1B01G061200 chr1D 88.288 222 26 0 4510 4731 91483183 91483404 3.940000e-67 267
9 TraesCS1B01G061200 chr1D 86.854 213 28 0 4519 4731 33162793 33162581 8.600000e-59 239
10 TraesCS1B01G061200 chr4A 93.962 265 12 4 6373 6635 62271106 62271368 1.340000e-106 398
11 TraesCS1B01G061200 chr2D 95.918 245 9 1 6392 6635 69426175 69425931 4.820000e-106 396
12 TraesCS1B01G061200 chr2D 93.561 264 14 3 6373 6635 400591569 400591830 2.240000e-104 390
13 TraesCS1B01G061200 chr2B 95.902 244 10 0 6392 6635 520429554 520429311 4.820000e-106 396
14 TraesCS1B01G061200 chr5B 93.585 265 13 4 6373 6635 388474575 388474837 6.240000e-105 392
15 TraesCS1B01G061200 chr5B 95.492 244 11 0 6392 6635 485918547 485918304 2.240000e-104 390
16 TraesCS1B01G061200 chr7D 93.561 264 14 3 6373 6635 402383241 402383502 2.240000e-104 390
17 TraesCS1B01G061200 chr7D 86.486 222 30 0 4510 4731 111564308 111564529 1.850000e-60 244
18 TraesCS1B01G061200 chr6B 95.492 244 11 0 6392 6635 166151418 166151175 2.240000e-104 390
19 TraesCS1B01G061200 chr4D 95.492 244 11 0 6392 6635 49337098 49336855 2.240000e-104 390
20 TraesCS1B01G061200 chr6A 88.739 222 25 0 4510 4731 604399273 604399052 8.480000e-69 272
21 TraesCS1B01G061200 chr5A 86.996 223 27 2 4510 4731 628225031 628224810 3.970000e-62 250
22 TraesCS1B01G061200 chr2A 89.231 195 21 0 4510 4704 20565604 20565798 1.850000e-60 244


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G061200 chr1B 45736329 45742963 6634 True 12253.000000 12253 100.000 1 6635 1 chr1B.!!$R1 6634
1 TraesCS1B01G061200 chr1A 29186228 29192586 6358 False 2910.000000 8126 87.145 2 6248 3 chr1A.!!$F2 6246
2 TraesCS1B01G061200 chr1D 28197736 28203690 5954 False 2863.666667 6023 92.018 1 5871 3 chr1D.!!$F2 5870

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 189 0.036388 GCCGTGTTGAGGAATGAGGA 60.036 55.0 0.00 0.0 0.00 3.71 F
258 306 0.107945 AATCGCTCTGCTTCCACTCC 60.108 55.0 0.00 0.0 0.00 3.85 F
663 756 0.179034 CTGCTACCTCCTGCCCATTC 60.179 60.0 0.00 0.0 0.00 2.67 F
667 760 0.251916 TACCTCCTGCCCATTCGTTG 59.748 55.0 0.00 0.0 0.00 4.10 F
781 984 0.254178 AGCGGCATTCTGACTTGGAT 59.746 50.0 1.45 0.0 0.00 3.41 F
2655 2886 0.176680 AGCCGAGCTTGTATGGTCTG 59.823 55.0 0.00 0.0 33.89 3.51 F
3383 3615 0.555769 TGGTGTTCCCTTGCCTTCTT 59.444 50.0 0.00 0.0 0.00 2.52 F
3656 3888 0.592637 CAGCCTTCGTCATTGCAACA 59.407 50.0 0.00 0.0 0.00 3.33 F
5268 5525 0.320771 ACTTCACCATGACGGAGCAC 60.321 55.0 0.00 0.0 38.63 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1453 1682 0.169672 CACCAAGGCTCTGAAATGCG 59.830 55.000 0.00 0.00 0.00 4.73 R
1570 1799 3.181510 GCGTGAGGGTGTAAATGATCAAC 60.182 47.826 0.00 0.00 0.00 3.18 R
2639 2870 1.066858 ACCACAGACCATACAAGCTCG 60.067 52.381 0.00 0.00 0.00 5.03 R
2655 2886 6.094719 TCACGTTGTTATGTAGTATCACCAC 58.905 40.000 0.00 0.00 0.00 4.16 R
2667 2898 3.059868 ACGCTCAAGTTCACGTTGTTATG 60.060 43.478 0.00 0.00 34.62 1.90 R
4337 4591 0.109342 GATACCCCAGGTCAGGCATG 59.891 60.000 0.00 0.00 37.09 4.06 R
4416 4670 0.397941 TGGCCCACTTGACTTCTCAG 59.602 55.000 0.00 0.00 0.00 3.35 R
5283 5540 0.740868 TCATCAGCAGTGCGTTAGCC 60.741 55.000 10.00 0.00 44.33 3.93 R
6591 6904 0.179137 GCATTTAAGCTTGGGGACGC 60.179 55.000 9.86 0.34 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 50 6.798427 AGTCTTCATAGAGGCTTGTATTCA 57.202 37.500 0.00 0.00 0.00 2.57
128 135 2.355756 CGAATCCCACAACAATAGCCAG 59.644 50.000 0.00 0.00 0.00 4.85
133 147 2.749621 CCCACAACAATAGCCAGTCTTC 59.250 50.000 0.00 0.00 0.00 2.87
169 183 2.029964 GGTCGCCGTGTTGAGGAA 59.970 61.111 0.00 0.00 0.00 3.36
170 184 1.375523 GGTCGCCGTGTTGAGGAAT 60.376 57.895 0.00 0.00 0.00 3.01
171 185 1.635663 GGTCGCCGTGTTGAGGAATG 61.636 60.000 0.00 0.00 0.00 2.67
172 186 0.669318 GTCGCCGTGTTGAGGAATGA 60.669 55.000 0.00 0.00 0.00 2.57
173 187 0.389817 TCGCCGTGTTGAGGAATGAG 60.390 55.000 0.00 0.00 0.00 2.90
174 188 1.361668 CGCCGTGTTGAGGAATGAGG 61.362 60.000 0.00 0.00 0.00 3.86
175 189 0.036388 GCCGTGTTGAGGAATGAGGA 60.036 55.000 0.00 0.00 0.00 3.71
197 211 1.797933 CCGCACTCTCGTTGACTCG 60.798 63.158 0.00 0.00 0.00 4.18
251 299 1.079503 GTTTCCGAATCGCTCTGCTT 58.920 50.000 0.00 0.00 0.00 3.91
255 303 1.424493 CCGAATCGCTCTGCTTCCAC 61.424 60.000 0.00 0.00 0.00 4.02
257 305 1.285578 GAATCGCTCTGCTTCCACTC 58.714 55.000 0.00 0.00 0.00 3.51
258 306 0.107945 AATCGCTCTGCTTCCACTCC 60.108 55.000 0.00 0.00 0.00 3.85
259 307 0.975040 ATCGCTCTGCTTCCACTCCT 60.975 55.000 0.00 0.00 0.00 3.69
260 308 1.153667 CGCTCTGCTTCCACTCCTC 60.154 63.158 0.00 0.00 0.00 3.71
261 309 1.220477 GCTCTGCTTCCACTCCTCC 59.780 63.158 0.00 0.00 0.00 4.30
262 310 1.264045 GCTCTGCTTCCACTCCTCCT 61.264 60.000 0.00 0.00 0.00 3.69
263 311 0.823460 CTCTGCTTCCACTCCTCCTC 59.177 60.000 0.00 0.00 0.00 3.71
264 312 0.967887 TCTGCTTCCACTCCTCCTCG 60.968 60.000 0.00 0.00 0.00 4.63
265 313 1.228894 TGCTTCCACTCCTCCTCGT 60.229 57.895 0.00 0.00 0.00 4.18
266 314 1.216710 GCTTCCACTCCTCCTCGTG 59.783 63.158 0.00 0.00 0.00 4.35
267 315 1.216710 CTTCCACTCCTCCTCGTGC 59.783 63.158 0.00 0.00 0.00 5.34
268 316 1.228894 TTCCACTCCTCCTCGTGCT 60.229 57.895 0.00 0.00 0.00 4.40
269 317 1.251527 TTCCACTCCTCCTCGTGCTC 61.252 60.000 0.00 0.00 0.00 4.26
270 318 2.487428 CACTCCTCCTCGTGCTCG 59.513 66.667 0.81 0.81 38.55 5.03
271 319 3.444805 ACTCCTCCTCGTGCTCGC 61.445 66.667 2.69 0.00 36.96 5.03
272 320 3.137459 CTCCTCCTCGTGCTCGCT 61.137 66.667 2.69 0.00 36.96 4.93
273 321 3.119709 CTCCTCCTCGTGCTCGCTC 62.120 68.421 2.69 0.00 36.96 5.03
274 322 4.200283 CCTCCTCGTGCTCGCTCC 62.200 72.222 2.69 0.00 36.96 4.70
275 323 4.200283 CTCCTCGTGCTCGCTCCC 62.200 72.222 2.69 0.00 36.96 4.30
277 325 4.504916 CCTCGTGCTCGCTCCCAG 62.505 72.222 2.69 0.00 36.96 4.45
278 326 3.753434 CTCGTGCTCGCTCCCAGT 61.753 66.667 2.69 0.00 36.96 4.00
279 327 3.978723 CTCGTGCTCGCTCCCAGTG 62.979 68.421 2.69 0.00 36.96 3.66
280 328 4.363990 CGTGCTCGCTCCCAGTGT 62.364 66.667 0.00 0.00 0.00 3.55
281 329 2.433318 GTGCTCGCTCCCAGTGTC 60.433 66.667 0.00 0.00 0.00 3.67
282 330 3.695606 TGCTCGCTCCCAGTGTCC 61.696 66.667 0.00 0.00 0.00 4.02
283 331 4.803426 GCTCGCTCCCAGTGTCCG 62.803 72.222 0.00 0.00 0.00 4.79
284 332 3.374402 CTCGCTCCCAGTGTCCGT 61.374 66.667 0.00 0.00 0.00 4.69
320 368 1.895707 CCTGATCCGAGCATTGCCC 60.896 63.158 4.70 0.00 0.00 5.36
323 371 4.488136 ATCCGAGCATTGCCCGCA 62.488 61.111 7.08 0.00 0.00 5.69
397 445 2.435938 GCCGCCGTCCTTGATTCA 60.436 61.111 0.00 0.00 0.00 2.57
635 720 2.789409 ACTGAGGGTTTGAGGTATGC 57.211 50.000 0.00 0.00 0.00 3.14
660 753 2.688666 CCTGCTACCTCCTGCCCA 60.689 66.667 0.00 0.00 0.00 5.36
662 755 1.639635 CCTGCTACCTCCTGCCCATT 61.640 60.000 0.00 0.00 0.00 3.16
663 756 0.179034 CTGCTACCTCCTGCCCATTC 60.179 60.000 0.00 0.00 0.00 2.67
664 757 1.227674 GCTACCTCCTGCCCATTCG 60.228 63.158 0.00 0.00 0.00 3.34
666 759 0.541863 CTACCTCCTGCCCATTCGTT 59.458 55.000 0.00 0.00 0.00 3.85
667 760 0.251916 TACCTCCTGCCCATTCGTTG 59.748 55.000 0.00 0.00 0.00 4.10
668 761 1.002134 CCTCCTGCCCATTCGTTGT 60.002 57.895 0.00 0.00 0.00 3.32
669 762 0.609131 CCTCCTGCCCATTCGTTGTT 60.609 55.000 0.00 0.00 0.00 2.83
743 946 2.593956 GGGTCAGACAGGGGGTGAC 61.594 68.421 2.17 0.00 39.96 3.67
781 984 0.254178 AGCGGCATTCTGACTTGGAT 59.746 50.000 1.45 0.00 0.00 3.41
782 985 0.659957 GCGGCATTCTGACTTGGATC 59.340 55.000 0.00 0.00 0.00 3.36
790 993 5.514204 GCATTCTGACTTGGATCATTTTTCG 59.486 40.000 0.00 0.00 0.00 3.46
834 1037 3.552604 TTGGCGTTTGATTAGAGCAAC 57.447 42.857 0.00 0.00 0.00 4.17
902 1122 4.889409 TGTGCTTGATTCTGGAGTTCTTTT 59.111 37.500 0.00 0.00 0.00 2.27
906 1126 5.221322 GCTTGATTCTGGAGTTCTTTTGGTT 60.221 40.000 0.00 0.00 0.00 3.67
907 1127 6.016276 GCTTGATTCTGGAGTTCTTTTGGTTA 60.016 38.462 0.00 0.00 0.00 2.85
913 1133 2.820197 GGAGTTCTTTTGGTTAGGCTGG 59.180 50.000 0.00 0.00 0.00 4.85
924 1144 2.632996 GGTTAGGCTGGAAAGGCTTTTT 59.367 45.455 14.66 0.00 44.49 1.94
925 1145 3.554960 GGTTAGGCTGGAAAGGCTTTTTG 60.555 47.826 14.66 8.45 44.49 2.44
1025 1245 4.480541 GCGTCAACATCAGATATCGAGAT 58.519 43.478 0.00 0.00 0.00 2.75
1141 1361 8.788325 AAAGGTCTGTAAGTACATTTGGATAC 57.212 34.615 0.00 0.00 35.36 2.24
1144 1364 7.399191 AGGTCTGTAAGTACATTTGGATACTGA 59.601 37.037 0.00 0.00 35.36 3.41
1152 1372 7.564793 AGTACATTTGGATACTGATACTTGCA 58.435 34.615 0.00 0.00 30.34 4.08
1154 1374 9.489084 GTACATTTGGATACTGATACTTGCATA 57.511 33.333 0.00 0.00 37.61 3.14
1207 1427 4.676723 GCTCTGCTTTCGTGAATAGAGAGT 60.677 45.833 16.56 0.00 34.97 3.24
1248 1468 7.465353 TGCATCCATCTGAAATAAAGTTGAA 57.535 32.000 0.00 0.00 0.00 2.69
1299 1528 9.542462 GTTGAATTGATAGTAACTGGCACTATA 57.458 33.333 4.13 0.00 38.91 1.31
1417 1646 7.555306 ACTAAAGTGACTCTTCCTTTTGTTC 57.445 36.000 0.00 0.00 32.77 3.18
1453 1682 7.435068 TTCATCAGTTTTGTTACTAAGGCTC 57.565 36.000 0.00 0.00 0.00 4.70
1570 1799 4.446371 AGGATGTTATTGGAGCTCTTTCG 58.554 43.478 14.64 0.00 0.00 3.46
1609 1838 3.055891 TCACGCTCATTCCTCTGATGAAA 60.056 43.478 0.00 0.00 0.00 2.69
1720 1949 5.988561 TGATTGTTTGGGTATTTGCAAGAAC 59.011 36.000 0.00 1.79 0.00 3.01
1788 2017 8.677300 CATGTAGTTAATTGGAGTTTAGCATGT 58.323 33.333 0.00 0.00 0.00 3.21
1904 2133 8.421249 TTCTCAATGGGTTAAAGATTCAATGT 57.579 30.769 0.00 0.00 0.00 2.71
2607 2838 3.763097 TGATTATCTTTGCGCAAGTGG 57.237 42.857 23.68 16.70 41.68 4.00
2655 2886 0.176680 AGCCGAGCTTGTATGGTCTG 59.823 55.000 0.00 0.00 33.89 3.51
2667 2898 5.847111 TGTATGGTCTGTGGTGATACTAC 57.153 43.478 0.00 0.00 0.00 2.73
2708 2939 5.734720 AGCGTAATGAGAGGAAGAAATCAA 58.265 37.500 0.00 0.00 0.00 2.57
2749 2980 6.610075 AAAAGATCCATAGGCAAACATTGT 57.390 33.333 0.00 0.00 0.00 2.71
2806 3037 2.447443 TGTGATCTAGCGAGGAACACT 58.553 47.619 14.96 0.00 37.38 3.55
2837 3068 8.495949 CGTTGTTCTAGTATTGTTGTGAAATCT 58.504 33.333 0.00 0.00 0.00 2.40
2884 3115 4.637276 TGACAGATGTGGTTGTAATCGTT 58.363 39.130 0.00 0.00 0.00 3.85
3190 3421 6.373495 TCACATTTTGGAGTGATCATGAGAAG 59.627 38.462 0.00 0.00 39.65 2.85
3295 3526 5.407407 TCAGGTAGTGAGAACCTTCATTC 57.593 43.478 0.00 0.00 45.26 2.67
3383 3615 0.555769 TGGTGTTCCCTTGCCTTCTT 59.444 50.000 0.00 0.00 0.00 2.52
3388 3620 1.889170 GTTCCCTTGCCTTCTTCTTGG 59.111 52.381 0.00 0.00 0.00 3.61
3474 3706 0.609131 CATTCCAGGTCCCCACACAC 60.609 60.000 0.00 0.00 0.00 3.82
3522 3754 6.911250 ACATTATCAATGCATCATGTCCAT 57.089 33.333 0.00 0.00 42.69 3.41
3561 3793 6.044287 ACATAGTGCATATCCCACCATTCTTA 59.956 38.462 0.00 0.00 33.75 2.10
3599 3831 8.350238 GCTGTATGCACTATGATATACTCATG 57.650 38.462 0.00 0.00 42.19 3.07
3656 3888 0.592637 CAGCCTTCGTCATTGCAACA 59.407 50.000 0.00 0.00 0.00 3.33
3698 3930 2.138320 CAAGCCACCATATCTGCTACG 58.862 52.381 0.00 0.00 32.82 3.51
3924 4156 7.909267 TCTTTTGCATCTCTGAACATATAACG 58.091 34.615 0.00 0.00 0.00 3.18
3938 4170 6.989155 ACATATAACGGAATAGGGAGAACA 57.011 37.500 0.00 0.00 0.00 3.18
3971 4203 7.484007 TGTTATTTCTCTTTTCTACGCTACTCG 59.516 37.037 0.00 0.00 45.38 4.18
3981 4213 2.150397 ACGCTACTCGCTTCAGTTTT 57.850 45.000 0.00 0.00 43.23 2.43
4045 4277 6.567602 AGCTAGGGTATCTTTCATTTGACT 57.432 37.500 0.00 0.00 0.00 3.41
4064 4296 3.554934 ACTGCTGGACAAACAGAATCAA 58.445 40.909 8.49 0.00 40.97 2.57
4327 4581 2.647299 TCAACTTTTATGCTCCCCTCCA 59.353 45.455 0.00 0.00 0.00 3.86
4329 4583 3.303351 ACTTTTATGCTCCCCTCCATG 57.697 47.619 0.00 0.00 0.00 3.66
4331 4585 3.269381 ACTTTTATGCTCCCCTCCATGAA 59.731 43.478 0.00 0.00 0.00 2.57
4333 4587 1.438469 TATGCTCCCCTCCATGAAGG 58.562 55.000 0.00 0.00 39.47 3.46
4351 4605 4.051167 TGGCATGCCTGACCTGGG 62.051 66.667 35.53 0.00 36.94 4.45
4386 4640 1.274167 CATTGACAAAGCCTGCCATGT 59.726 47.619 0.00 0.00 0.00 3.21
4412 4666 8.842764 TCCCTATGGTCTAAAAATTAGGTTTCT 58.157 33.333 0.00 0.00 0.00 2.52
4500 4757 9.150348 ACTGAATTTTGTTAAGAACCTTTTGTG 57.850 29.630 0.00 0.00 0.00 3.33
4523 4780 6.749118 GTGAATTGGCAACTAATAAGCTTCTG 59.251 38.462 0.00 0.00 37.61 3.02
4710 4967 3.753797 GGATCCTTGTTGTCACCTTTCTC 59.246 47.826 3.84 0.00 0.00 2.87
4714 4971 2.971660 TGTTGTCACCTTTCTCGTGA 57.028 45.000 0.00 0.00 37.91 4.35
4749 5006 4.037222 TGGAGTTCCCATACTTCATAGCA 58.963 43.478 0.00 0.00 40.82 3.49
4791 5048 2.521708 GGTTGGGTGCCACTTGCT 60.522 61.111 0.00 0.00 42.00 3.91
4965 5222 2.594592 ACCGAGTTGGCAAGTGGC 60.595 61.111 13.24 0.00 43.94 5.01
4971 5228 2.124109 TTGGCAAGTGGCGTTCCA 60.124 55.556 0.00 0.00 46.16 3.53
5163 5420 3.087031 CAAGGACATCCACAAGAAGCAT 58.913 45.455 0.00 0.00 38.89 3.79
5260 5517 3.840078 TGATTCTGAGGACTTCACCATGA 59.160 43.478 0.00 0.00 0.00 3.07
5268 5525 0.320771 ACTTCACCATGACGGAGCAC 60.321 55.000 0.00 0.00 38.63 4.40
5292 5549 2.882876 GAGAGACCGGCTAACGCA 59.117 61.111 0.00 0.00 42.52 5.24
5293 5550 1.516603 GAGAGACCGGCTAACGCAC 60.517 63.158 0.00 0.00 42.52 5.34
5338 5616 1.535015 GCGACCTGAGCTACTCATCAC 60.535 57.143 0.00 0.00 39.92 3.06
5339 5617 1.745653 CGACCTGAGCTACTCATCACA 59.254 52.381 0.00 0.00 39.92 3.58
5340 5618 2.360483 CGACCTGAGCTACTCATCACAT 59.640 50.000 0.00 0.00 39.92 3.21
5341 5619 3.715495 GACCTGAGCTACTCATCACATG 58.285 50.000 0.00 0.00 39.92 3.21
5344 5622 4.408270 ACCTGAGCTACTCATCACATGATT 59.592 41.667 0.00 0.00 39.92 2.57
5345 5623 4.989797 CCTGAGCTACTCATCACATGATTC 59.010 45.833 0.00 0.00 39.92 2.52
5346 5624 4.953667 TGAGCTACTCATCACATGATTCC 58.046 43.478 0.00 0.00 38.85 3.01
5415 5693 5.518865 ACAAGGTATTCCAGCCAAACATAT 58.481 37.500 0.00 0.00 35.89 1.78
5454 5732 2.980233 AACAGCTGCAAGGACGCC 60.980 61.111 15.27 0.00 0.00 5.68
5487 5765 0.605319 TCCTCGGCAACACCATTGTC 60.605 55.000 0.00 0.00 39.03 3.18
5508 5786 4.838152 GCGCGCAGGGATTCAGGA 62.838 66.667 29.10 0.00 46.37 3.86
5656 5934 8.987890 TCTGAACCTTTTCTTTTTGTTCTTTTG 58.012 29.630 0.00 0.00 36.98 2.44
5657 5935 8.093659 TGAACCTTTTCTTTTTGTTCTTTTGG 57.906 30.769 0.00 0.00 36.98 3.28
5683 5975 5.204302 CTGATTCAGAGTGAGCAGTACTGC 61.204 50.000 35.56 35.56 44.61 4.40
5684 5976 7.570280 CTGATTCAGAGTGAGCAGTACTGCA 62.570 48.000 40.88 24.43 45.74 4.41
5695 5989 3.386768 CAGTACTGCACTTGTGTAGGT 57.613 47.619 19.70 10.10 34.26 3.08
5716 6010 4.485163 GTCAGGTGAACATTGTAAATGGC 58.515 43.478 5.08 0.00 0.00 4.40
5725 6019 6.435591 TGAACATTGTAAATGGCCAGTTATCA 59.564 34.615 26.87 21.13 0.00 2.15
5748 6042 6.885918 TCAAGTGAGCCTCATTCATCATTTTA 59.114 34.615 0.00 0.00 0.00 1.52
5755 6049 7.723324 AGCCTCATTCATCATTTTATTCTTGG 58.277 34.615 0.00 0.00 0.00 3.61
5809 6103 7.450014 TGCTCACAATAATCTTTCCCTGTAAAA 59.550 33.333 0.00 0.00 0.00 1.52
5847 6141 6.862209 TCCAAATGCATGTTTACCATAAGAC 58.138 36.000 0.00 0.00 30.71 3.01
5897 6192 4.424626 ACACACACTGCTCTTGATATACG 58.575 43.478 0.00 0.00 0.00 3.06
5954 6252 4.708726 ACTTTTGGTATGCAAGATGCTC 57.291 40.909 3.78 0.00 45.31 4.26
5970 6268 1.917782 GCTCGGGTGCGCAATGTTTA 61.918 55.000 14.00 0.00 0.00 2.01
5977 6275 2.923020 GGTGCGCAATGTTTATGGAAAG 59.077 45.455 14.00 0.00 0.00 2.62
6093 6396 3.725754 TTTTTGCCGAGAGCTCCTT 57.274 47.368 10.93 0.00 44.23 3.36
6098 6401 0.107993 TGCCGAGAGCTCCTTGAATG 60.108 55.000 10.93 0.00 44.23 2.67
6152 6462 1.102154 TACCCGAGCATGCCAAAATG 58.898 50.000 15.66 0.80 0.00 2.32
6160 6470 4.439153 CGAGCATGCCAAAATGTCAGTATT 60.439 41.667 15.66 0.00 0.00 1.89
6219 6532 2.130193 ACTCATGCATGGGGAGTATGT 58.870 47.619 29.60 4.56 39.95 2.29
6248 6561 0.031043 CTCCAGATCGCTGCTCTCAG 59.969 60.000 0.00 0.00 40.91 3.35
6249 6562 0.394899 TCCAGATCGCTGCTCTCAGA 60.395 55.000 0.00 0.00 42.95 3.27
6250 6563 0.675083 CCAGATCGCTGCTCTCAGAT 59.325 55.000 0.00 0.00 42.95 2.90
6251 6564 1.336148 CCAGATCGCTGCTCTCAGATC 60.336 57.143 0.00 2.28 42.95 2.75
6252 6565 1.337387 CAGATCGCTGCTCTCAGATCA 59.663 52.381 14.14 0.00 42.95 2.92
6253 6566 2.029739 CAGATCGCTGCTCTCAGATCAT 60.030 50.000 14.14 1.19 42.95 2.45
6254 6567 2.629137 AGATCGCTGCTCTCAGATCATT 59.371 45.455 14.14 0.00 42.95 2.57
6255 6568 3.825585 AGATCGCTGCTCTCAGATCATTA 59.174 43.478 14.14 0.00 42.95 1.90
6256 6569 4.463539 AGATCGCTGCTCTCAGATCATTAT 59.536 41.667 14.14 0.00 42.95 1.28
6257 6570 4.171663 TCGCTGCTCTCAGATCATTATC 57.828 45.455 0.00 0.00 42.95 1.75
6258 6571 3.571401 TCGCTGCTCTCAGATCATTATCA 59.429 43.478 0.00 0.00 42.95 2.15
6259 6572 4.038402 TCGCTGCTCTCAGATCATTATCAA 59.962 41.667 0.00 0.00 42.95 2.57
6260 6573 4.150274 CGCTGCTCTCAGATCATTATCAAC 59.850 45.833 0.00 0.00 42.95 3.18
6261 6574 5.299148 GCTGCTCTCAGATCATTATCAACT 58.701 41.667 0.00 0.00 42.95 3.16
6262 6575 5.759273 GCTGCTCTCAGATCATTATCAACTT 59.241 40.000 0.00 0.00 42.95 2.66
6263 6576 6.260493 GCTGCTCTCAGATCATTATCAACTTT 59.740 38.462 0.00 0.00 42.95 2.66
6264 6577 7.440556 GCTGCTCTCAGATCATTATCAACTTTA 59.559 37.037 0.00 0.00 42.95 1.85
6265 6578 8.654230 TGCTCTCAGATCATTATCAACTTTAC 57.346 34.615 0.00 0.00 34.28 2.01
6266 6579 8.481314 TGCTCTCAGATCATTATCAACTTTACT 58.519 33.333 0.00 0.00 34.28 2.24
6267 6580 9.323985 GCTCTCAGATCATTATCAACTTTACTT 57.676 33.333 0.00 0.00 34.28 2.24
6294 6607 7.750229 TTCATTTTGTTCTAAGAGCTGATGT 57.250 32.000 0.00 0.00 0.00 3.06
6295 6608 8.846943 TTCATTTTGTTCTAAGAGCTGATGTA 57.153 30.769 0.00 0.00 0.00 2.29
6296 6609 8.256611 TCATTTTGTTCTAAGAGCTGATGTAC 57.743 34.615 0.00 0.00 0.00 2.90
6297 6610 8.097038 TCATTTTGTTCTAAGAGCTGATGTACT 58.903 33.333 0.00 0.00 0.00 2.73
6298 6611 8.725148 CATTTTGTTCTAAGAGCTGATGTACTT 58.275 33.333 0.00 0.00 0.00 2.24
6299 6612 8.677148 TTTTGTTCTAAGAGCTGATGTACTTT 57.323 30.769 0.00 0.00 0.00 2.66
6300 6613 7.658179 TTGTTCTAAGAGCTGATGTACTTTG 57.342 36.000 0.00 0.00 0.00 2.77
6301 6614 6.759272 TGTTCTAAGAGCTGATGTACTTTGT 58.241 36.000 0.00 0.00 0.00 2.83
6302 6615 6.646653 TGTTCTAAGAGCTGATGTACTTTGTG 59.353 38.462 0.00 0.00 0.00 3.33
6303 6616 6.346477 TCTAAGAGCTGATGTACTTTGTGT 57.654 37.500 0.00 0.00 0.00 3.72
6304 6617 6.390721 TCTAAGAGCTGATGTACTTTGTGTC 58.609 40.000 0.00 0.00 0.00 3.67
6305 6618 4.607293 AGAGCTGATGTACTTTGTGTCA 57.393 40.909 0.00 0.00 0.00 3.58
6306 6619 4.310769 AGAGCTGATGTACTTTGTGTCAC 58.689 43.478 0.00 0.00 0.00 3.67
6307 6620 4.039730 AGAGCTGATGTACTTTGTGTCACT 59.960 41.667 4.27 0.00 0.00 3.41
6308 6621 4.060900 AGCTGATGTACTTTGTGTCACTG 58.939 43.478 4.27 0.00 0.00 3.66
6309 6622 3.187227 GCTGATGTACTTTGTGTCACTGG 59.813 47.826 4.27 0.00 0.00 4.00
6310 6623 4.380531 CTGATGTACTTTGTGTCACTGGT 58.619 43.478 4.27 3.34 0.00 4.00
6311 6624 4.377021 TGATGTACTTTGTGTCACTGGTC 58.623 43.478 4.27 0.00 0.00 4.02
6312 6625 3.897141 TGTACTTTGTGTCACTGGTCA 57.103 42.857 4.27 0.00 0.00 4.02
6313 6626 4.209307 TGTACTTTGTGTCACTGGTCAA 57.791 40.909 4.27 0.00 0.00 3.18
6314 6627 4.580868 TGTACTTTGTGTCACTGGTCAAA 58.419 39.130 4.27 0.00 0.00 2.69
6315 6628 5.004448 TGTACTTTGTGTCACTGGTCAAAA 58.996 37.500 4.27 0.00 31.07 2.44
6316 6629 5.473846 TGTACTTTGTGTCACTGGTCAAAAA 59.526 36.000 4.27 0.00 31.07 1.94
6317 6630 5.059404 ACTTTGTGTCACTGGTCAAAAAG 57.941 39.130 4.27 6.38 40.79 2.27
6318 6631 4.522789 ACTTTGTGTCACTGGTCAAAAAGT 59.477 37.500 4.27 6.97 42.17 2.66
6319 6632 4.695217 TTGTGTCACTGGTCAAAAAGTC 57.305 40.909 4.27 0.00 0.00 3.01
6320 6633 3.950397 TGTGTCACTGGTCAAAAAGTCT 58.050 40.909 4.27 0.00 0.00 3.24
6321 6634 3.689161 TGTGTCACTGGTCAAAAAGTCTG 59.311 43.478 4.27 0.00 0.00 3.51
6322 6635 3.065371 GTGTCACTGGTCAAAAAGTCTGG 59.935 47.826 0.00 0.00 0.00 3.86
6323 6636 3.279434 GTCACTGGTCAAAAAGTCTGGT 58.721 45.455 0.00 0.00 0.00 4.00
6324 6637 3.694566 GTCACTGGTCAAAAAGTCTGGTT 59.305 43.478 0.00 0.00 0.00 3.67
6325 6638 3.694072 TCACTGGTCAAAAAGTCTGGTTG 59.306 43.478 0.00 0.00 0.00 3.77
6326 6639 2.427095 ACTGGTCAAAAAGTCTGGTTGC 59.573 45.455 0.00 0.00 0.00 4.17
6327 6640 2.689983 CTGGTCAAAAAGTCTGGTTGCT 59.310 45.455 0.00 0.00 0.00 3.91
6328 6641 3.096092 TGGTCAAAAAGTCTGGTTGCTT 58.904 40.909 0.00 0.00 0.00 3.91
6329 6642 4.274147 TGGTCAAAAAGTCTGGTTGCTTA 58.726 39.130 0.00 0.00 0.00 3.09
6330 6643 4.707448 TGGTCAAAAAGTCTGGTTGCTTAA 59.293 37.500 0.00 0.00 0.00 1.85
6331 6644 5.163561 TGGTCAAAAAGTCTGGTTGCTTAAG 60.164 40.000 0.00 0.00 0.00 1.85
6332 6645 5.281727 GTCAAAAAGTCTGGTTGCTTAAGG 58.718 41.667 4.29 0.00 0.00 2.69
6333 6646 5.067283 GTCAAAAAGTCTGGTTGCTTAAGGA 59.933 40.000 4.29 0.00 0.00 3.36
6334 6647 5.654650 TCAAAAAGTCTGGTTGCTTAAGGAA 59.345 36.000 5.16 5.16 0.00 3.36
6335 6648 6.153680 TCAAAAAGTCTGGTTGCTTAAGGAAA 59.846 34.615 11.32 0.00 0.00 3.13
6336 6649 5.515797 AAAGTCTGGTTGCTTAAGGAAAC 57.484 39.130 17.13 17.13 33.38 2.78
6337 6650 4.164843 AGTCTGGTTGCTTAAGGAAACA 57.835 40.909 23.86 23.86 40.79 2.83
6338 6651 4.532834 AGTCTGGTTGCTTAAGGAAACAA 58.467 39.130 25.08 14.78 42.41 2.83
6339 6652 5.140454 AGTCTGGTTGCTTAAGGAAACAAT 58.860 37.500 25.08 13.28 42.41 2.71
6340 6653 6.303839 AGTCTGGTTGCTTAAGGAAACAATA 58.696 36.000 25.08 15.09 42.41 1.90
6341 6654 6.206829 AGTCTGGTTGCTTAAGGAAACAATAC 59.793 38.462 25.08 23.44 42.41 1.89
6342 6655 6.016610 GTCTGGTTGCTTAAGGAAACAATACA 60.017 38.462 25.08 9.42 42.41 2.29
6343 6656 6.547880 TCTGGTTGCTTAAGGAAACAATACAA 59.452 34.615 25.08 8.59 42.41 2.41
6344 6657 6.744112 TGGTTGCTTAAGGAAACAATACAAG 58.256 36.000 23.36 0.00 40.12 3.16
6345 6658 6.156519 GGTTGCTTAAGGAAACAATACAAGG 58.843 40.000 18.81 0.00 35.18 3.61
6346 6659 6.015772 GGTTGCTTAAGGAAACAATACAAGGA 60.016 38.462 18.81 0.00 35.18 3.36
6347 6660 6.817765 TGCTTAAGGAAACAATACAAGGAG 57.182 37.500 4.29 0.00 0.00 3.69
6348 6661 6.303839 TGCTTAAGGAAACAATACAAGGAGT 58.696 36.000 4.29 0.00 0.00 3.85
6349 6662 6.775629 TGCTTAAGGAAACAATACAAGGAGTT 59.224 34.615 4.29 0.00 0.00 3.01
6350 6663 7.040686 TGCTTAAGGAAACAATACAAGGAGTTC 60.041 37.037 4.29 0.00 0.00 3.01
6351 6664 7.040686 GCTTAAGGAAACAATACAAGGAGTTCA 60.041 37.037 4.29 0.00 0.00 3.18
6352 6665 6.635030 AAGGAAACAATACAAGGAGTTCAC 57.365 37.500 0.00 0.00 0.00 3.18
6353 6666 5.070685 AGGAAACAATACAAGGAGTTCACC 58.929 41.667 0.00 0.00 0.00 4.02
6354 6667 4.825085 GGAAACAATACAAGGAGTTCACCA 59.175 41.667 0.00 0.00 0.00 4.17
6355 6668 5.300792 GGAAACAATACAAGGAGTTCACCAA 59.699 40.000 0.00 0.00 0.00 3.67
6356 6669 6.391227 AAACAATACAAGGAGTTCACCAAG 57.609 37.500 0.00 0.00 0.00 3.61
6357 6670 4.398319 ACAATACAAGGAGTTCACCAAGG 58.602 43.478 0.00 0.00 0.00 3.61
6358 6671 4.104102 ACAATACAAGGAGTTCACCAAGGA 59.896 41.667 0.00 0.00 0.00 3.36
6359 6672 4.993705 ATACAAGGAGTTCACCAAGGAA 57.006 40.909 0.00 0.00 0.00 3.36
6360 6673 3.214696 ACAAGGAGTTCACCAAGGAAG 57.785 47.619 0.00 0.00 0.00 3.46
6361 6674 2.509964 ACAAGGAGTTCACCAAGGAAGT 59.490 45.455 0.00 0.00 33.24 3.01
6362 6675 3.142174 CAAGGAGTTCACCAAGGAAGTC 58.858 50.000 0.00 0.00 43.41 3.01
6363 6676 2.408565 AGGAGTTCACCAAGGAAGTCA 58.591 47.619 11.54 0.00 45.08 3.41
6364 6677 2.777692 AGGAGTTCACCAAGGAAGTCAA 59.222 45.455 11.54 0.00 45.08 3.18
6365 6678 3.202151 AGGAGTTCACCAAGGAAGTCAAA 59.798 43.478 11.54 0.00 45.08 2.69
6366 6679 3.951680 GGAGTTCACCAAGGAAGTCAAAA 59.048 43.478 11.54 0.00 45.08 2.44
6367 6680 4.584743 GGAGTTCACCAAGGAAGTCAAAAT 59.415 41.667 11.54 0.00 45.08 1.82
6368 6681 5.507985 GGAGTTCACCAAGGAAGTCAAAATG 60.508 44.000 11.54 0.00 45.08 2.32
6369 6682 4.956075 AGTTCACCAAGGAAGTCAAAATGT 59.044 37.500 0.00 0.00 0.00 2.71
6370 6683 6.126409 AGTTCACCAAGGAAGTCAAAATGTA 58.874 36.000 0.00 0.00 0.00 2.29
6371 6684 6.263168 AGTTCACCAAGGAAGTCAAAATGTAG 59.737 38.462 0.00 0.00 0.00 2.74
6372 6685 5.935945 TCACCAAGGAAGTCAAAATGTAGA 58.064 37.500 0.00 0.00 0.00 2.59
6373 6686 6.361433 TCACCAAGGAAGTCAAAATGTAGAA 58.639 36.000 0.00 0.00 0.00 2.10
6374 6687 6.831353 TCACCAAGGAAGTCAAAATGTAGAAA 59.169 34.615 0.00 0.00 0.00 2.52
6375 6688 7.505585 TCACCAAGGAAGTCAAAATGTAGAAAT 59.494 33.333 0.00 0.00 0.00 2.17
6376 6689 8.792633 CACCAAGGAAGTCAAAATGTAGAAATA 58.207 33.333 0.00 0.00 0.00 1.40
6377 6690 9.533831 ACCAAGGAAGTCAAAATGTAGAAATAT 57.466 29.630 0.00 0.00 0.00 1.28
6408 6721 9.733556 TGTTAAGGAACAAAGAGCATTCTATAA 57.266 29.630 0.00 0.00 42.66 0.98
6413 6726 9.466497 AGGAACAAAGAGCATTCTATAAAATCA 57.534 29.630 0.00 0.00 31.96 2.57
6467 6780 8.572855 AAGCATTCTATAAATCTATGAAGGGC 57.427 34.615 0.00 0.00 0.00 5.19
6468 6781 7.926705 AGCATTCTATAAATCTATGAAGGGCT 58.073 34.615 0.00 0.00 0.00 5.19
6469 6782 9.051259 AGCATTCTATAAATCTATGAAGGGCTA 57.949 33.333 0.00 0.00 33.02 3.93
6470 6783 9.844257 GCATTCTATAAATCTATGAAGGGCTAT 57.156 33.333 0.00 0.00 0.00 2.97
6474 6787 9.997172 TCTATAAATCTATGAAGGGCTATCTCA 57.003 33.333 0.00 0.00 0.00 3.27
6478 6791 8.677870 AAATCTATGAAGGGCTATCTCATACT 57.322 34.615 0.00 0.00 0.00 2.12
6479 6792 9.775539 AAATCTATGAAGGGCTATCTCATACTA 57.224 33.333 0.00 0.00 0.00 1.82
6480 6793 8.995027 ATCTATGAAGGGCTATCTCATACTAG 57.005 38.462 0.00 0.00 0.00 2.57
6481 6794 5.930837 ATGAAGGGCTATCTCATACTAGC 57.069 43.478 0.00 0.00 39.69 3.42
6482 6795 4.740902 TGAAGGGCTATCTCATACTAGCA 58.259 43.478 4.20 0.00 41.71 3.49
6483 6796 5.336945 TGAAGGGCTATCTCATACTAGCAT 58.663 41.667 4.20 0.00 41.71 3.79
6484 6797 5.186603 TGAAGGGCTATCTCATACTAGCATG 59.813 44.000 0.00 0.00 41.71 4.06
6485 6798 4.029520 AGGGCTATCTCATACTAGCATGG 58.970 47.826 3.06 0.00 41.71 3.66
6486 6799 3.772025 GGGCTATCTCATACTAGCATGGT 59.228 47.826 1.62 1.62 41.71 3.55
6487 6800 4.223923 GGGCTATCTCATACTAGCATGGTT 59.776 45.833 1.12 0.00 41.71 3.67
6488 6801 5.415221 GGCTATCTCATACTAGCATGGTTC 58.585 45.833 1.12 0.00 41.71 3.62
6489 6802 5.186797 GGCTATCTCATACTAGCATGGTTCT 59.813 44.000 1.12 0.00 41.71 3.01
6490 6803 6.295575 GGCTATCTCATACTAGCATGGTTCTT 60.296 42.308 1.12 0.00 41.71 2.52
6491 6804 7.093727 GGCTATCTCATACTAGCATGGTTCTTA 60.094 40.741 1.12 0.00 41.71 2.10
6492 6805 8.307483 GCTATCTCATACTAGCATGGTTCTTAA 58.693 37.037 1.12 0.00 40.07 1.85
6495 6808 8.306313 TCTCATACTAGCATGGTTCTTAAAGA 57.694 34.615 1.12 0.00 0.00 2.52
6496 6809 8.758829 TCTCATACTAGCATGGTTCTTAAAGAA 58.241 33.333 1.12 0.00 0.00 2.52
6497 6810 9.383519 CTCATACTAGCATGGTTCTTAAAGAAA 57.616 33.333 1.12 0.00 35.75 2.52
6498 6811 9.733556 TCATACTAGCATGGTTCTTAAAGAAAA 57.266 29.630 1.12 0.00 35.75 2.29
6501 6814 8.691661 ACTAGCATGGTTCTTAAAGAAAAAGA 57.308 30.769 1.12 0.00 35.75 2.52
6502 6815 9.131791 ACTAGCATGGTTCTTAAAGAAAAAGAA 57.868 29.630 1.12 0.00 39.91 2.52
6503 6816 9.965824 CTAGCATGGTTCTTAAAGAAAAAGAAA 57.034 29.630 1.12 0.00 42.83 2.52
6505 6818 9.665719 AGCATGGTTCTTAAAGAAAAAGAAAAA 57.334 25.926 0.00 0.00 42.83 1.94
6506 6819 9.702726 GCATGGTTCTTAAAGAAAAAGAAAAAC 57.297 29.630 0.00 0.00 42.83 2.43
6509 6822 9.765795 TGGTTCTTAAAGAAAAAGAAAAACACA 57.234 25.926 0.17 0.00 42.83 3.72
6516 6829 8.669946 AAAGAAAAAGAAAAACACAAAGGACA 57.330 26.923 0.00 0.00 0.00 4.02
6517 6830 8.846943 AAGAAAAAGAAAAACACAAAGGACAT 57.153 26.923 0.00 0.00 0.00 3.06
6518 6831 9.936759 AAGAAAAAGAAAAACACAAAGGACATA 57.063 25.926 0.00 0.00 0.00 2.29
6519 6832 9.936759 AGAAAAAGAAAAACACAAAGGACATAA 57.063 25.926 0.00 0.00 0.00 1.90
6523 6836 9.883142 AAAGAAAAACACAAAGGACATAAATCA 57.117 25.926 0.00 0.00 0.00 2.57
6525 6838 9.480053 AGAAAAACACAAAGGACATAAATCATG 57.520 29.630 0.00 0.00 40.78 3.07
6543 6856 5.769967 TCATGTGAACAAAACAAAAACCG 57.230 34.783 0.00 0.00 0.00 4.44
6544 6857 5.470368 TCATGTGAACAAAACAAAAACCGA 58.530 33.333 0.00 0.00 0.00 4.69
6545 6858 5.574830 TCATGTGAACAAAACAAAAACCGAG 59.425 36.000 0.00 0.00 0.00 4.63
6546 6859 4.238514 TGTGAACAAAACAAAAACCGAGG 58.761 39.130 0.00 0.00 0.00 4.63
6547 6860 4.239304 GTGAACAAAACAAAAACCGAGGT 58.761 39.130 0.00 0.00 0.00 3.85
6548 6861 5.048224 TGTGAACAAAACAAAAACCGAGGTA 60.048 36.000 0.00 0.00 0.00 3.08
6549 6862 6.037726 GTGAACAAAACAAAAACCGAGGTAT 58.962 36.000 0.00 0.00 0.00 2.73
6550 6863 7.148120 TGTGAACAAAACAAAAACCGAGGTATA 60.148 33.333 0.00 0.00 0.00 1.47
6551 6864 7.166307 GTGAACAAAACAAAAACCGAGGTATAC 59.834 37.037 0.00 0.00 0.00 1.47
6552 6865 6.075762 ACAAAACAAAAACCGAGGTATACC 57.924 37.500 14.54 14.54 0.00 2.73
6553 6866 5.148568 CAAAACAAAAACCGAGGTATACCG 58.851 41.667 16.31 5.45 42.08 4.02
6554 6867 3.959535 ACAAAAACCGAGGTATACCGA 57.040 42.857 16.31 0.00 42.08 4.69
6555 6868 4.476628 ACAAAAACCGAGGTATACCGAT 57.523 40.909 16.31 0.00 42.08 4.18
6556 6869 5.596836 ACAAAAACCGAGGTATACCGATA 57.403 39.130 16.31 0.00 42.08 2.92
6557 6870 5.976458 ACAAAAACCGAGGTATACCGATAA 58.024 37.500 16.31 0.00 42.08 1.75
6558 6871 6.585416 ACAAAAACCGAGGTATACCGATAAT 58.415 36.000 16.31 0.00 42.08 1.28
6559 6872 7.049754 ACAAAAACCGAGGTATACCGATAATT 58.950 34.615 16.31 7.71 42.08 1.40
6560 6873 7.011669 ACAAAAACCGAGGTATACCGATAATTG 59.988 37.037 16.31 16.70 42.08 2.32
6561 6874 5.796424 AACCGAGGTATACCGATAATTGT 57.204 39.130 16.31 5.53 42.08 2.71
6562 6875 5.796424 ACCGAGGTATACCGATAATTGTT 57.204 39.130 16.31 0.00 42.08 2.83
6563 6876 5.535333 ACCGAGGTATACCGATAATTGTTG 58.465 41.667 16.31 0.42 42.08 3.33
6564 6877 5.302568 ACCGAGGTATACCGATAATTGTTGA 59.697 40.000 16.31 0.00 42.08 3.18
6565 6878 6.183360 ACCGAGGTATACCGATAATTGTTGAA 60.183 38.462 16.31 0.00 42.08 2.69
6566 6879 6.365247 CCGAGGTATACCGATAATTGTTGAAG 59.635 42.308 16.31 0.00 42.08 3.02
6567 6880 7.143340 CGAGGTATACCGATAATTGTTGAAGA 58.857 38.462 16.31 0.00 42.08 2.87
6568 6881 7.650504 CGAGGTATACCGATAATTGTTGAAGAA 59.349 37.037 16.31 0.00 42.08 2.52
6569 6882 8.888579 AGGTATACCGATAATTGTTGAAGAAG 57.111 34.615 16.31 0.00 42.08 2.85
6570 6883 8.701895 AGGTATACCGATAATTGTTGAAGAAGA 58.298 33.333 16.31 0.00 42.08 2.87
6571 6884 9.321562 GGTATACCGATAATTGTTGAAGAAGAA 57.678 33.333 6.06 0.00 0.00 2.52
6574 6887 7.979444 ACCGATAATTGTTGAAGAAGAAAGA 57.021 32.000 0.00 0.00 0.00 2.52
6575 6888 8.567285 ACCGATAATTGTTGAAGAAGAAAGAT 57.433 30.769 0.00 0.00 0.00 2.40
6576 6889 8.454106 ACCGATAATTGTTGAAGAAGAAAGATG 58.546 33.333 0.00 0.00 0.00 2.90
6577 6890 7.912250 CCGATAATTGTTGAAGAAGAAAGATGG 59.088 37.037 0.00 0.00 0.00 3.51
6578 6891 7.912250 CGATAATTGTTGAAGAAGAAAGATGGG 59.088 37.037 0.00 0.00 0.00 4.00
6579 6892 8.884124 ATAATTGTTGAAGAAGAAAGATGGGA 57.116 30.769 0.00 0.00 0.00 4.37
6580 6893 7.787623 AATTGTTGAAGAAGAAAGATGGGAT 57.212 32.000 0.00 0.00 0.00 3.85
6581 6894 6.579666 TTGTTGAAGAAGAAAGATGGGATG 57.420 37.500 0.00 0.00 0.00 3.51
6582 6895 4.460382 TGTTGAAGAAGAAAGATGGGATGC 59.540 41.667 0.00 0.00 0.00 3.91
6583 6896 3.624777 TGAAGAAGAAAGATGGGATGCC 58.375 45.455 0.00 0.00 0.00 4.40
6584 6897 3.010472 TGAAGAAGAAAGATGGGATGCCA 59.990 43.478 9.00 9.00 0.00 4.92
6585 6898 3.744940 AGAAGAAAGATGGGATGCCAA 57.255 42.857 11.10 0.00 0.00 4.52
6586 6899 3.359950 AGAAGAAAGATGGGATGCCAAC 58.640 45.455 11.10 7.94 0.00 3.77
6587 6900 2.149973 AGAAAGATGGGATGCCAACC 57.850 50.000 11.10 5.40 0.00 3.77
6588 6901 0.740737 GAAAGATGGGATGCCAACCG 59.259 55.000 11.10 0.00 0.00 4.44
6589 6902 0.684153 AAAGATGGGATGCCAACCGG 60.684 55.000 11.10 0.00 0.00 5.28
6590 6903 2.519302 GATGGGATGCCAACCGGG 60.519 66.667 11.10 0.00 40.85 5.73
6591 6904 4.141876 ATGGGATGCCAACCGGGG 62.142 66.667 11.10 0.00 37.04 5.73
6607 6920 4.408378 GGCGTCCCCAAGCTTAAA 57.592 55.556 0.00 0.00 0.00 1.52
6608 6921 2.882170 GGCGTCCCCAAGCTTAAAT 58.118 52.632 0.00 0.00 0.00 1.40
6609 6922 0.455815 GGCGTCCCCAAGCTTAAATG 59.544 55.000 0.00 0.00 0.00 2.32
6610 6923 0.179137 GCGTCCCCAAGCTTAAATGC 60.179 55.000 0.00 0.00 0.00 3.56
6611 6924 1.463674 CGTCCCCAAGCTTAAATGCT 58.536 50.000 0.00 0.00 46.40 3.79
6623 6936 6.690194 AGCTTAAATGCTTGAGTATCCTTG 57.310 37.500 0.00 0.00 40.93 3.61
6624 6937 6.418101 AGCTTAAATGCTTGAGTATCCTTGA 58.582 36.000 0.00 0.00 40.93 3.02
6625 6938 6.886459 AGCTTAAATGCTTGAGTATCCTTGAA 59.114 34.615 0.00 0.00 40.93 2.69
6626 6939 7.394359 AGCTTAAATGCTTGAGTATCCTTGAAA 59.606 33.333 0.00 0.00 40.93 2.69
6627 6940 8.193438 GCTTAAATGCTTGAGTATCCTTGAAAT 58.807 33.333 0.00 0.00 0.00 2.17
6634 6947 9.905713 TGCTTGAGTATCCTTGAAATATTTACT 57.094 29.630 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 7.946207 TGAATACAAGCCTCTATGAAGACTAG 58.054 38.462 0.00 0.00 0.00 2.57
20 21 7.898014 TGAATACAAGCCTCTATGAAGACTA 57.102 36.000 0.00 0.00 0.00 2.59
63 69 9.985318 CTCTCTCATTTGAACTGAATTGAATAC 57.015 33.333 0.00 0.00 0.00 1.89
75 81 7.704789 AAATGTTTTGCTCTCTCATTTGAAC 57.295 32.000 0.00 0.00 37.34 3.18
128 135 3.260740 CTGGTCTGCTCAATCTGAAGAC 58.739 50.000 0.00 0.00 34.89 3.01
133 147 1.678123 CCACCTGGTCTGCTCAATCTG 60.678 57.143 0.00 0.00 0.00 2.90
169 183 4.148825 GAGTGCGGCCGTCCTCAT 62.149 66.667 29.49 12.67 28.60 2.90
171 185 4.500116 GAGAGTGCGGCCGTCCTC 62.500 72.222 28.70 28.35 0.00 3.71
189 203 4.391216 TGCAGTAGTACTAGTCGAGTCAAC 59.609 45.833 7.30 0.00 39.81 3.18
197 211 6.755607 GGTGGTTTATTGCAGTAGTACTAGTC 59.244 42.308 7.30 4.20 0.00 2.59
251 299 1.679305 GAGCACGAGGAGGAGTGGA 60.679 63.158 0.00 0.00 38.68 4.02
255 303 3.119709 GAGCGAGCACGAGGAGGAG 62.120 68.421 8.01 0.00 42.66 3.69
257 305 4.200283 GGAGCGAGCACGAGGAGG 62.200 72.222 8.01 0.00 42.66 4.30
258 306 4.200283 GGGAGCGAGCACGAGGAG 62.200 72.222 8.01 0.00 42.66 3.69
260 308 4.504916 CTGGGAGCGAGCACGAGG 62.505 72.222 8.01 0.00 42.66 4.63
261 309 3.753434 ACTGGGAGCGAGCACGAG 61.753 66.667 8.01 0.00 42.66 4.18
262 310 4.056125 CACTGGGAGCGAGCACGA 62.056 66.667 8.01 0.00 42.66 4.35
263 311 4.363990 ACACTGGGAGCGAGCACG 62.364 66.667 0.00 0.00 42.93 5.34
264 312 2.433318 GACACTGGGAGCGAGCAC 60.433 66.667 0.00 0.00 0.00 4.40
265 313 3.695606 GGACACTGGGAGCGAGCA 61.696 66.667 0.00 0.00 0.00 4.26
266 314 4.803426 CGGACACTGGGAGCGAGC 62.803 72.222 0.00 0.00 0.00 5.03
267 315 2.820767 GAACGGACACTGGGAGCGAG 62.821 65.000 0.00 0.00 0.00 5.03
268 316 2.915659 AACGGACACTGGGAGCGA 60.916 61.111 0.00 0.00 0.00 4.93
269 317 2.432628 GAACGGACACTGGGAGCG 60.433 66.667 0.00 0.00 0.00 5.03
270 318 2.047179 GGAACGGACACTGGGAGC 60.047 66.667 0.00 0.00 0.00 4.70
301 349 2.550101 GGCAATGCTCGGATCAGGC 61.550 63.158 4.82 0.00 0.00 4.85
419 467 2.678934 CCGGTGGAGGTCGAGGAA 60.679 66.667 0.00 0.00 0.00 3.36
492 540 4.430765 CCCCCGTGGACTCGAACG 62.431 72.222 0.41 0.41 39.48 3.95
493 541 2.993264 TCCCCCGTGGACTCGAAC 60.993 66.667 0.00 0.00 38.61 3.95
635 720 0.761802 GGAGGTAGCAGGAGAATGGG 59.238 60.000 0.00 0.00 0.00 4.00
660 753 7.945033 AATTTGTTTAGCATCAACAACGAAT 57.055 28.000 7.41 0.00 42.48 3.34
662 755 6.419413 GGAAATTTGTTTAGCATCAACAACGA 59.581 34.615 0.00 0.00 42.48 3.85
663 756 6.346518 GGGAAATTTGTTTAGCATCAACAACG 60.347 38.462 0.00 0.00 42.48 4.10
664 757 6.481644 TGGGAAATTTGTTTAGCATCAACAAC 59.518 34.615 0.00 0.00 42.48 3.32
666 759 6.166984 TGGGAAATTTGTTTAGCATCAACA 57.833 33.333 0.00 0.00 32.16 3.33
667 760 6.346518 CGTTGGGAAATTTGTTTAGCATCAAC 60.347 38.462 0.00 0.00 0.00 3.18
668 761 5.694006 CGTTGGGAAATTTGTTTAGCATCAA 59.306 36.000 0.00 0.00 0.00 2.57
669 762 5.226396 CGTTGGGAAATTTGTTTAGCATCA 58.774 37.500 0.00 0.00 0.00 3.07
743 946 4.436584 CCGCTTCAAATCTCTACAGCAAAG 60.437 45.833 0.00 0.00 0.00 2.77
781 984 4.909696 TGACCAAGAAAGCGAAAAATGA 57.090 36.364 0.00 0.00 0.00 2.57
782 985 5.922544 AGAATGACCAAGAAAGCGAAAAATG 59.077 36.000 0.00 0.00 0.00 2.32
790 993 6.076981 TCTTTGAAGAATGACCAAGAAAGC 57.923 37.500 0.00 0.00 30.73 3.51
834 1037 0.921347 CTGAAAATACGAGCGTCCCG 59.079 55.000 0.00 0.00 0.00 5.14
902 1122 0.777446 AAGCCTTTCCAGCCTAACCA 59.223 50.000 0.00 0.00 0.00 3.67
906 1126 2.957474 ACAAAAAGCCTTTCCAGCCTA 58.043 42.857 0.00 0.00 0.00 3.93
907 1127 1.793414 ACAAAAAGCCTTTCCAGCCT 58.207 45.000 0.00 0.00 0.00 4.58
913 1133 4.201714 GCACAACAGAACAAAAAGCCTTTC 60.202 41.667 0.00 0.00 0.00 2.62
924 1144 1.729276 GCAGCAGCACAACAGAACA 59.271 52.632 0.00 0.00 41.58 3.18
925 1145 4.622364 GCAGCAGCACAACAGAAC 57.378 55.556 0.00 0.00 41.58 3.01
1101 1321 9.787435 TTACAGACCTTTTCTATGTACATGTTT 57.213 29.630 18.81 0.00 31.12 2.83
1184 1404 3.775202 TCTCTATTCACGAAAGCAGAGC 58.225 45.455 0.00 0.00 30.95 4.09
1202 1422 8.654230 TGCAAAAAGACATATGAGATACTCTC 57.346 34.615 10.38 0.00 43.65 3.20
1207 1427 8.929260 ATGGATGCAAAAAGACATATGAGATA 57.071 30.769 10.38 0.00 0.00 1.98
1226 1446 8.195436 AGCATTCAACTTTATTTCAGATGGATG 58.805 33.333 0.00 0.00 34.56 3.51
1248 1468 7.776969 ACACTATCATTGATACCAAAGAAGCAT 59.223 33.333 2.14 0.00 34.25 3.79
1302 1531 9.470399 GGTCCCTGGTCTTCTTTATATTAAAAA 57.530 33.333 0.00 0.00 0.00 1.94
1303 1532 8.616598 TGGTCCCTGGTCTTCTTTATATTAAAA 58.383 33.333 0.00 0.00 0.00 1.52
1417 1646 6.477688 ACAAAACTGATGAAAACTTCTGCATG 59.522 34.615 0.00 0.00 0.00 4.06
1453 1682 0.169672 CACCAAGGCTCTGAAATGCG 59.830 55.000 0.00 0.00 0.00 4.73
1570 1799 3.181510 GCGTGAGGGTGTAAATGATCAAC 60.182 47.826 0.00 0.00 0.00 3.18
1609 1838 5.241949 TGCCCGTAAGACAACAAAAACATAT 59.758 36.000 0.00 0.00 43.02 1.78
1704 1933 4.218200 CACTCATGTTCTTGCAAATACCCA 59.782 41.667 0.00 0.00 0.00 4.51
1720 1949 9.823647 ACTATCCTTTCTACAATTACACTCATG 57.176 33.333 0.00 0.00 0.00 3.07
1788 2017 4.157656 AGTTACAGAAACTTTGCACTTGCA 59.842 37.500 0.00 0.00 46.61 4.08
1836 2065 6.339587 TGTGTGACAGTGTATGATTCTACA 57.660 37.500 0.00 0.00 0.00 2.74
1886 2115 9.555727 GCTATACTACATTGAATCTTTAACCCA 57.444 33.333 0.00 0.00 0.00 4.51
2081 2312 6.683974 AATAAAATGCGCTCTGTACTTCAT 57.316 33.333 9.73 0.00 0.00 2.57
2124 2355 6.002653 AGAAACCAAAGGAGACAGTTAAGT 57.997 37.500 0.00 0.00 0.00 2.24
2140 2371 5.392767 TGTGCAAACAAACTAAGAAACCA 57.607 34.783 0.00 0.00 0.00 3.67
2607 2838 4.972591 GCAGAATTGCCCACACAC 57.027 55.556 0.00 0.00 44.74 3.82
2639 2870 1.066858 ACCACAGACCATACAAGCTCG 60.067 52.381 0.00 0.00 0.00 5.03
2655 2886 6.094719 TCACGTTGTTATGTAGTATCACCAC 58.905 40.000 0.00 0.00 0.00 4.16
2667 2898 3.059868 ACGCTCAAGTTCACGTTGTTATG 60.060 43.478 0.00 0.00 34.62 1.90
2806 3037 6.419710 CACAACAATACTAGAACAACGACTCA 59.580 38.462 0.00 0.00 0.00 3.41
2884 3115 2.365941 TCCGATTAATATGGTCACCGCA 59.634 45.455 6.20 0.00 0.00 5.69
3383 3615 1.488705 CCTGCCCAGTGTACCCAAGA 61.489 60.000 0.00 0.00 0.00 3.02
3388 3620 2.045926 CAGCCTGCCCAGTGTACC 60.046 66.667 0.00 0.00 0.00 3.34
3522 3754 5.976458 TGCACTATGTCAATCTGTACATCA 58.024 37.500 0.00 0.00 37.50 3.07
3599 3831 5.363101 TCTGCAGTGATCAATCATCTTACC 58.637 41.667 14.67 0.00 39.30 2.85
3668 3900 1.008538 GGTGGCTTGACTTGCAACG 60.009 57.895 0.00 0.00 35.33 4.10
3698 3930 5.774630 AGAGCCTGCTTTATAATCGAGTAC 58.225 41.667 0.00 0.00 0.00 2.73
3924 4156 5.644977 CAAACCTTTGTTCTCCCTATTCC 57.355 43.478 0.00 0.00 32.15 3.01
3938 4170 9.946165 CGTAGAAAAGAGAAATAACAAACCTTT 57.054 29.630 0.00 0.00 0.00 3.11
4002 4234 3.753272 GCTATCCTCTGTTTCACAGCAAA 59.247 43.478 0.00 0.00 45.54 3.68
4045 4277 3.286353 TGTTGATTCTGTTTGTCCAGCA 58.714 40.909 0.00 0.00 32.32 4.41
4077 4309 3.202906 GCGACAAAGGTCTGGCATATAA 58.797 45.455 0.00 0.00 42.05 0.98
4081 4313 1.073025 TGCGACAAAGGTCTGGCAT 59.927 52.632 0.00 0.00 42.05 4.40
4083 4315 1.444119 TTGTGCGACAAAGGTCTGGC 61.444 55.000 0.00 0.00 42.05 4.85
4089 4321 2.746904 TGGACATATTGTGCGACAAAGG 59.253 45.455 5.94 2.65 41.94 3.11
4147 4383 5.038033 CAGCTATCAGTTCTTACTTCGGTC 58.962 45.833 0.00 0.00 30.26 4.79
4150 4386 5.066634 TCTCCAGCTATCAGTTCTTACTTCG 59.933 44.000 0.00 0.00 30.26 3.79
4156 4392 4.968080 AGGATTCTCCAGCTATCAGTTCTT 59.032 41.667 0.00 0.00 39.61 2.52
4307 4561 3.085952 TGGAGGGGAGCATAAAAGTTG 57.914 47.619 0.00 0.00 0.00 3.16
4317 4571 1.225704 CACCTTCATGGAGGGGAGC 59.774 63.158 24.55 0.00 43.24 4.70
4327 4581 0.682209 GTCAGGCATGCCACCTTCAT 60.682 55.000 37.18 13.31 34.42 2.57
4329 4583 2.048603 GGTCAGGCATGCCACCTTC 61.049 63.158 37.18 21.00 34.42 3.46
4331 4585 2.937689 AGGTCAGGCATGCCACCT 60.938 61.111 33.07 33.07 37.58 4.00
4333 4587 2.753043 CCAGGTCAGGCATGCCAC 60.753 66.667 37.18 26.66 38.92 5.01
4337 4591 0.109342 GATACCCCAGGTCAGGCATG 59.891 60.000 0.00 0.00 37.09 4.06
4386 4640 8.842764 AGAAACCTAATTTTTAGACCATAGGGA 58.157 33.333 0.00 0.00 35.34 4.20
4412 4666 3.214328 GCCCACTTGACTTCTCAGAAAA 58.786 45.455 0.00 0.00 0.00 2.29
4416 4670 0.397941 TGGCCCACTTGACTTCTCAG 59.602 55.000 0.00 0.00 0.00 3.35
4417 4671 0.397941 CTGGCCCACTTGACTTCTCA 59.602 55.000 0.00 0.00 0.00 3.27
4418 4672 0.957888 GCTGGCCCACTTGACTTCTC 60.958 60.000 0.00 0.00 0.00 2.87
4419 4673 1.073897 GCTGGCCCACTTGACTTCT 59.926 57.895 0.00 0.00 0.00 2.85
4420 4674 0.610232 ATGCTGGCCCACTTGACTTC 60.610 55.000 0.00 0.00 0.00 3.01
4423 4677 0.895100 TTGATGCTGGCCCACTTGAC 60.895 55.000 0.00 0.00 0.00 3.18
4424 4678 0.895100 GTTGATGCTGGCCCACTTGA 60.895 55.000 0.00 0.00 0.00 3.02
4425 4679 0.896940 AGTTGATGCTGGCCCACTTG 60.897 55.000 0.00 0.00 0.00 3.16
4500 4757 7.088589 TCAGAAGCTTATTAGTTGCCAATTC 57.911 36.000 0.00 0.00 0.00 2.17
4523 4780 1.268079 GGTTCAGCTCCACTTGCTTTC 59.732 52.381 0.00 0.00 38.92 2.62
4565 4822 5.277345 GCAAATAAGTAGGGCGTAATCTGTG 60.277 44.000 0.00 0.00 0.00 3.66
4566 4823 4.814771 GCAAATAAGTAGGGCGTAATCTGT 59.185 41.667 0.00 0.00 0.00 3.41
4710 4967 1.135112 TCCACCATCAACGAGATCACG 60.135 52.381 11.16 11.16 33.72 4.35
4714 4971 2.093447 GGAACTCCACCATCAACGAGAT 60.093 50.000 0.00 0.00 34.76 2.75
4749 5006 4.831155 CCTTCATCCACCTTATTGATGCAT 59.169 41.667 0.00 0.00 36.64 3.96
4791 5048 6.433716 TGATGATAAAGAAGGTGATTGCAACA 59.566 34.615 0.00 0.00 32.84 3.33
4851 5108 1.150827 TGCTGTGCATCTCAAACTCG 58.849 50.000 0.00 0.00 31.71 4.18
4965 5222 3.819564 TGGGAGAAGATATGTGGAACG 57.180 47.619 0.00 0.00 42.39 3.95
4971 5228 6.126390 TGGTGATGAAATGGGAGAAGATATGT 60.126 38.462 0.00 0.00 0.00 2.29
5163 5420 3.667497 AGCATCTTCTCAAAGTCGTCA 57.333 42.857 0.00 0.00 33.95 4.35
5260 5517 1.867919 CTCTCGACCTTGTGCTCCGT 61.868 60.000 0.00 0.00 0.00 4.69
5281 5538 3.490759 CAGCAGTGCGTTAGCCGG 61.491 66.667 10.00 0.00 44.33 6.13
5283 5540 0.740868 TCATCAGCAGTGCGTTAGCC 60.741 55.000 10.00 0.00 44.33 3.93
5338 5616 2.361119 CCAGCACAATGGAGGAATCATG 59.639 50.000 0.00 0.00 43.57 3.07
5339 5617 2.662866 CCAGCACAATGGAGGAATCAT 58.337 47.619 0.00 0.00 43.57 2.45
5340 5618 1.956636 GCCAGCACAATGGAGGAATCA 60.957 52.381 0.00 0.00 43.57 2.57
5341 5619 0.743097 GCCAGCACAATGGAGGAATC 59.257 55.000 0.00 0.00 43.57 2.52
5344 5622 2.079088 TTGGCCAGCACAATGGAGGA 62.079 55.000 5.11 0.00 43.57 3.71
5345 5623 1.601419 CTTGGCCAGCACAATGGAGG 61.601 60.000 5.11 0.00 43.57 4.30
5346 5624 0.896940 ACTTGGCCAGCACAATGGAG 60.897 55.000 5.11 0.00 43.57 3.86
5415 5693 1.006571 GAACTCCAGTTCGTCGCCA 60.007 57.895 3.72 0.00 43.97 5.69
5508 5786 5.573219 TCCACAACAATCCTCTTGATGATT 58.427 37.500 2.77 0.00 32.68 2.57
5644 5922 7.835822 TCTGAATCAGAACCAAAAGAACAAAA 58.164 30.769 10.99 0.00 37.57 2.44
5648 5926 6.260936 TCACTCTGAATCAGAACCAAAAGAAC 59.739 38.462 14.44 0.00 40.18 3.01
5651 5929 5.334724 GCTCACTCTGAATCAGAACCAAAAG 60.335 44.000 14.44 3.34 40.18 2.27
5654 5932 3.071457 TGCTCACTCTGAATCAGAACCAA 59.929 43.478 14.44 0.00 40.18 3.67
5656 5934 3.260740 CTGCTCACTCTGAATCAGAACC 58.739 50.000 14.44 2.11 40.18 3.62
5657 5935 3.924144 ACTGCTCACTCTGAATCAGAAC 58.076 45.455 14.44 2.76 40.18 3.01
5683 5975 3.131396 GTTCACCTGACCTACACAAGTG 58.869 50.000 0.00 0.00 0.00 3.16
5684 5976 2.769663 TGTTCACCTGACCTACACAAGT 59.230 45.455 0.00 0.00 0.00 3.16
5685 5977 3.469008 TGTTCACCTGACCTACACAAG 57.531 47.619 0.00 0.00 0.00 3.16
5695 5989 3.509575 GGCCATTTACAATGTTCACCTGA 59.490 43.478 0.00 0.00 0.00 3.86
5716 6010 3.616956 TGAGGCTCACTTGATAACTGG 57.383 47.619 14.43 0.00 0.00 4.00
5725 6019 7.893124 ATAAAATGATGAATGAGGCTCACTT 57.107 32.000 21.37 14.84 0.00 3.16
5748 6042 7.308169 GCAAAATTAAAGCTTTCTGCCAAGAAT 60.308 33.333 16.57 4.36 42.04 2.40
5755 6049 6.401796 CCATCTGCAAAATTAAAGCTTTCTGC 60.402 38.462 16.57 16.72 43.29 4.26
5809 6103 4.840115 TGCATTTGGATTTTCCTTCTTCCT 59.160 37.500 0.00 0.00 37.46 3.36
5812 6106 6.117975 ACATGCATTTGGATTTTCCTTCTT 57.882 33.333 0.00 0.00 37.46 2.52
5824 6118 6.753279 CAGTCTTATGGTAAACATGCATTTGG 59.247 38.462 0.00 0.00 40.82 3.28
5847 6141 3.820467 TGTCAGGCAACATCTTTTACCAG 59.180 43.478 0.00 0.00 41.41 4.00
5857 6151 3.244875 TGTGTTATCCTGTCAGGCAACAT 60.245 43.478 27.76 15.49 40.04 2.71
5922 6217 9.643693 CTTGCATACCAAAAGTATTCAGATTTT 57.356 29.630 0.00 0.00 39.79 1.82
5954 6252 0.525242 CCATAAACATTGCGCACCCG 60.525 55.000 11.12 3.50 37.57 5.28
5970 6268 1.674322 CGAACACCGCCCTTTCCAT 60.674 57.895 0.00 0.00 0.00 3.41
5977 6275 1.500396 GATTGTTCGAACACCGCCC 59.500 57.895 29.74 13.32 38.92 6.13
6108 6411 5.348179 CGCAAGGTGAATGCAAATTTTCATA 59.652 36.000 3.69 0.00 44.01 2.15
6110 6413 3.493877 CGCAAGGTGAATGCAAATTTTCA 59.506 39.130 0.00 0.00 44.01 2.69
6187 6500 6.127366 CCCCATGCATGAGTAGTAAAATTGTT 60.127 38.462 28.31 0.00 0.00 2.83
6200 6513 2.105306 TCACATACTCCCCATGCATGAG 59.895 50.000 28.31 18.96 0.00 2.90
6202 6515 2.501261 CTCACATACTCCCCATGCATG 58.499 52.381 20.19 20.19 0.00 4.06
6234 6547 2.728690 ATGATCTGAGAGCAGCGATC 57.271 50.000 6.55 1.37 42.01 3.69
6268 6581 8.800332 ACATCAGCTCTTAGAACAAAATGAATT 58.200 29.630 0.00 0.00 0.00 2.17
6269 6582 8.345724 ACATCAGCTCTTAGAACAAAATGAAT 57.654 30.769 0.00 0.00 0.00 2.57
6270 6583 7.750229 ACATCAGCTCTTAGAACAAAATGAA 57.250 32.000 0.00 0.00 0.00 2.57
6271 6584 8.097038 AGTACATCAGCTCTTAGAACAAAATGA 58.903 33.333 0.00 0.00 0.00 2.57
6272 6585 8.261492 AGTACATCAGCTCTTAGAACAAAATG 57.739 34.615 0.00 0.00 0.00 2.32
6273 6586 8.854614 AAGTACATCAGCTCTTAGAACAAAAT 57.145 30.769 0.00 0.00 0.00 1.82
6274 6587 8.559536 CAAAGTACATCAGCTCTTAGAACAAAA 58.440 33.333 0.00 0.00 0.00 2.44
6275 6588 7.715249 ACAAAGTACATCAGCTCTTAGAACAAA 59.285 33.333 0.00 0.00 0.00 2.83
6276 6589 7.171508 CACAAAGTACATCAGCTCTTAGAACAA 59.828 37.037 0.00 0.00 0.00 2.83
6277 6590 6.646653 CACAAAGTACATCAGCTCTTAGAACA 59.353 38.462 0.00 0.00 0.00 3.18
6278 6591 6.647067 ACACAAAGTACATCAGCTCTTAGAAC 59.353 38.462 0.00 0.00 0.00 3.01
6279 6592 6.759272 ACACAAAGTACATCAGCTCTTAGAA 58.241 36.000 0.00 0.00 0.00 2.10
6280 6593 6.015434 TGACACAAAGTACATCAGCTCTTAGA 60.015 38.462 0.00 0.00 0.00 2.10
6281 6594 6.090088 GTGACACAAAGTACATCAGCTCTTAG 59.910 42.308 0.00 0.00 0.00 2.18
6282 6595 5.926542 GTGACACAAAGTACATCAGCTCTTA 59.073 40.000 0.00 0.00 0.00 2.10
6283 6596 4.752101 GTGACACAAAGTACATCAGCTCTT 59.248 41.667 0.00 0.00 0.00 2.85
6284 6597 4.039730 AGTGACACAAAGTACATCAGCTCT 59.960 41.667 8.59 0.00 0.00 4.09
6285 6598 4.151335 CAGTGACACAAAGTACATCAGCTC 59.849 45.833 8.59 0.00 0.00 4.09
6286 6599 4.060900 CAGTGACACAAAGTACATCAGCT 58.939 43.478 8.59 0.00 0.00 4.24
6287 6600 3.187227 CCAGTGACACAAAGTACATCAGC 59.813 47.826 8.59 0.00 0.00 4.26
6288 6601 4.380531 ACCAGTGACACAAAGTACATCAG 58.619 43.478 8.59 0.00 0.00 2.90
6289 6602 4.141824 TGACCAGTGACACAAAGTACATCA 60.142 41.667 8.59 0.00 0.00 3.07
6290 6603 4.377021 TGACCAGTGACACAAAGTACATC 58.623 43.478 8.59 0.00 0.00 3.06
6291 6604 4.415881 TGACCAGTGACACAAAGTACAT 57.584 40.909 8.59 0.00 0.00 2.29
6292 6605 3.897141 TGACCAGTGACACAAAGTACA 57.103 42.857 8.59 0.00 0.00 2.90
6293 6606 5.554822 TTTTGACCAGTGACACAAAGTAC 57.445 39.130 8.59 0.00 34.54 2.73
6294 6607 5.708230 ACTTTTTGACCAGTGACACAAAGTA 59.292 36.000 21.32 10.24 41.73 2.24
6295 6608 4.522789 ACTTTTTGACCAGTGACACAAAGT 59.477 37.500 19.10 19.10 40.09 2.66
6296 6609 5.059404 ACTTTTTGACCAGTGACACAAAG 57.941 39.130 18.28 18.28 38.78 2.77
6297 6610 4.764823 AGACTTTTTGACCAGTGACACAAA 59.235 37.500 8.59 0.00 0.00 2.83
6298 6611 4.155826 CAGACTTTTTGACCAGTGACACAA 59.844 41.667 8.59 0.00 0.00 3.33
6299 6612 3.689161 CAGACTTTTTGACCAGTGACACA 59.311 43.478 8.59 0.00 0.00 3.72
6300 6613 3.065371 CCAGACTTTTTGACCAGTGACAC 59.935 47.826 0.00 0.00 0.00 3.67
6301 6614 3.278574 CCAGACTTTTTGACCAGTGACA 58.721 45.455 0.00 0.00 0.00 3.58
6302 6615 3.279434 ACCAGACTTTTTGACCAGTGAC 58.721 45.455 0.00 0.00 0.00 3.67
6303 6616 3.644966 ACCAGACTTTTTGACCAGTGA 57.355 42.857 0.00 0.00 0.00 3.41
6304 6617 3.734902 GCAACCAGACTTTTTGACCAGTG 60.735 47.826 0.00 0.00 0.00 3.66
6305 6618 2.427095 GCAACCAGACTTTTTGACCAGT 59.573 45.455 0.00 0.00 0.00 4.00
6306 6619 2.689983 AGCAACCAGACTTTTTGACCAG 59.310 45.455 0.00 0.00 0.00 4.00
6307 6620 2.733956 AGCAACCAGACTTTTTGACCA 58.266 42.857 0.00 0.00 0.00 4.02
6308 6621 3.801114 AAGCAACCAGACTTTTTGACC 57.199 42.857 0.00 0.00 0.00 4.02
6309 6622 5.067283 TCCTTAAGCAACCAGACTTTTTGAC 59.933 40.000 0.00 0.00 0.00 3.18
6310 6623 5.197451 TCCTTAAGCAACCAGACTTTTTGA 58.803 37.500 0.00 0.00 0.00 2.69
6311 6624 5.514274 TCCTTAAGCAACCAGACTTTTTG 57.486 39.130 0.00 0.00 0.00 2.44
6312 6625 6.071051 TGTTTCCTTAAGCAACCAGACTTTTT 60.071 34.615 11.34 0.00 0.00 1.94
6313 6626 5.420739 TGTTTCCTTAAGCAACCAGACTTTT 59.579 36.000 11.34 0.00 0.00 2.27
6314 6627 4.953579 TGTTTCCTTAAGCAACCAGACTTT 59.046 37.500 11.34 0.00 0.00 2.66
6315 6628 4.532834 TGTTTCCTTAAGCAACCAGACTT 58.467 39.130 11.34 0.00 0.00 3.01
6316 6629 4.164843 TGTTTCCTTAAGCAACCAGACT 57.835 40.909 11.34 0.00 0.00 3.24
6317 6630 4.911514 TTGTTTCCTTAAGCAACCAGAC 57.088 40.909 11.34 0.00 31.72 3.51
6318 6631 6.065374 TGTATTGTTTCCTTAAGCAACCAGA 58.935 36.000 11.34 0.00 38.43 3.86
6319 6632 6.325919 TGTATTGTTTCCTTAAGCAACCAG 57.674 37.500 11.34 0.00 38.43 4.00
6320 6633 6.239176 CCTTGTATTGTTTCCTTAAGCAACCA 60.239 38.462 11.34 3.68 38.43 3.67
6321 6634 6.015772 TCCTTGTATTGTTTCCTTAAGCAACC 60.016 38.462 11.34 0.00 38.43 3.77
6322 6635 6.977213 TCCTTGTATTGTTTCCTTAAGCAAC 58.023 36.000 0.00 3.08 38.43 4.17
6323 6636 6.775629 ACTCCTTGTATTGTTTCCTTAAGCAA 59.224 34.615 0.00 0.00 39.68 3.91
6324 6637 6.303839 ACTCCTTGTATTGTTTCCTTAAGCA 58.696 36.000 0.00 0.00 0.00 3.91
6325 6638 6.819397 ACTCCTTGTATTGTTTCCTTAAGC 57.181 37.500 0.00 0.00 0.00 3.09
6326 6639 8.290325 GTGAACTCCTTGTATTGTTTCCTTAAG 58.710 37.037 0.00 0.00 0.00 1.85
6327 6640 7.229907 GGTGAACTCCTTGTATTGTTTCCTTAA 59.770 37.037 0.00 0.00 0.00 1.85
6328 6641 6.713450 GGTGAACTCCTTGTATTGTTTCCTTA 59.287 38.462 0.00 0.00 0.00 2.69
6329 6642 5.535030 GGTGAACTCCTTGTATTGTTTCCTT 59.465 40.000 0.00 0.00 0.00 3.36
6330 6643 5.070685 GGTGAACTCCTTGTATTGTTTCCT 58.929 41.667 0.00 0.00 0.00 3.36
6331 6644 4.825085 TGGTGAACTCCTTGTATTGTTTCC 59.175 41.667 0.00 0.00 0.00 3.13
6332 6645 6.385649 TTGGTGAACTCCTTGTATTGTTTC 57.614 37.500 0.00 0.00 0.00 2.78
6333 6646 5.301805 CCTTGGTGAACTCCTTGTATTGTTT 59.698 40.000 0.00 0.00 0.00 2.83
6334 6647 4.827284 CCTTGGTGAACTCCTTGTATTGTT 59.173 41.667 0.00 0.00 0.00 2.83
6335 6648 4.104102 TCCTTGGTGAACTCCTTGTATTGT 59.896 41.667 0.00 0.00 0.00 2.71
6336 6649 4.651778 TCCTTGGTGAACTCCTTGTATTG 58.348 43.478 0.00 0.00 0.00 1.90
6337 6650 4.993705 TCCTTGGTGAACTCCTTGTATT 57.006 40.909 0.00 0.00 0.00 1.89
6338 6651 4.351111 ACTTCCTTGGTGAACTCCTTGTAT 59.649 41.667 0.00 0.00 0.00 2.29
6339 6652 3.714798 ACTTCCTTGGTGAACTCCTTGTA 59.285 43.478 0.00 0.00 0.00 2.41
6340 6653 2.509964 ACTTCCTTGGTGAACTCCTTGT 59.490 45.455 0.00 0.00 0.00 3.16
6341 6654 3.142174 GACTTCCTTGGTGAACTCCTTG 58.858 50.000 0.00 0.00 0.00 3.61
6342 6655 2.777692 TGACTTCCTTGGTGAACTCCTT 59.222 45.455 0.00 0.00 0.00 3.36
6343 6656 2.408565 TGACTTCCTTGGTGAACTCCT 58.591 47.619 0.00 0.00 0.00 3.69
6344 6657 2.930826 TGACTTCCTTGGTGAACTCC 57.069 50.000 0.00 0.00 0.00 3.85
6345 6658 5.067805 ACATTTTGACTTCCTTGGTGAACTC 59.932 40.000 0.00 0.00 0.00 3.01
6346 6659 4.956075 ACATTTTGACTTCCTTGGTGAACT 59.044 37.500 0.00 0.00 0.00 3.01
6347 6660 5.262588 ACATTTTGACTTCCTTGGTGAAC 57.737 39.130 0.00 0.00 0.00 3.18
6348 6661 6.361433 TCTACATTTTGACTTCCTTGGTGAA 58.639 36.000 0.00 0.00 0.00 3.18
6349 6662 5.935945 TCTACATTTTGACTTCCTTGGTGA 58.064 37.500 0.00 0.00 0.00 4.02
6350 6663 6.633500 TTCTACATTTTGACTTCCTTGGTG 57.367 37.500 0.00 0.00 0.00 4.17
6351 6664 7.839680 ATTTCTACATTTTGACTTCCTTGGT 57.160 32.000 0.00 0.00 0.00 3.67
6378 6691 9.905713 AGAATGCTCTTTGTTCCTTAACATATA 57.094 29.630 0.00 0.00 44.85 0.86
6379 6692 8.814038 AGAATGCTCTTTGTTCCTTAACATAT 57.186 30.769 0.00 0.00 44.85 1.78
6380 6693 9.905713 ATAGAATGCTCTTTGTTCCTTAACATA 57.094 29.630 0.00 0.00 38.00 2.29
6381 6694 8.814038 ATAGAATGCTCTTTGTTCCTTAACAT 57.186 30.769 0.00 0.00 38.00 2.71
6382 6695 9.733556 TTATAGAATGCTCTTTGTTCCTTAACA 57.266 29.630 0.00 0.00 37.17 2.41
6387 6700 9.466497 TGATTTTATAGAATGCTCTTTGTTCCT 57.534 29.630 0.00 0.00 32.70 3.36
6440 6753 9.730705 CCCTTCATAGATTTATAGAATGCTTCA 57.269 33.333 0.00 0.00 0.00 3.02
6441 6754 8.672815 GCCCTTCATAGATTTATAGAATGCTTC 58.327 37.037 0.00 0.00 0.00 3.86
6442 6755 8.389366 AGCCCTTCATAGATTTATAGAATGCTT 58.611 33.333 0.00 0.00 0.00 3.91
6443 6756 7.926705 AGCCCTTCATAGATTTATAGAATGCT 58.073 34.615 0.00 0.00 0.00 3.79
6444 6757 9.844257 ATAGCCCTTCATAGATTTATAGAATGC 57.156 33.333 0.00 0.00 0.00 3.56
6448 6761 9.997172 TGAGATAGCCCTTCATAGATTTATAGA 57.003 33.333 0.00 0.00 0.00 1.98
6452 6765 9.775539 AGTATGAGATAGCCCTTCATAGATTTA 57.224 33.333 0.00 0.00 0.00 1.40
6453 6766 8.677870 AGTATGAGATAGCCCTTCATAGATTT 57.322 34.615 0.00 0.00 0.00 2.17
6454 6767 9.420118 CTAGTATGAGATAGCCCTTCATAGATT 57.580 37.037 0.00 0.00 0.00 2.40
6455 6768 7.505585 GCTAGTATGAGATAGCCCTTCATAGAT 59.494 40.741 0.00 0.00 38.77 1.98
6456 6769 6.831353 GCTAGTATGAGATAGCCCTTCATAGA 59.169 42.308 0.00 0.00 38.77 1.98
6457 6770 6.605194 TGCTAGTATGAGATAGCCCTTCATAG 59.395 42.308 2.06 0.00 43.05 2.23
6458 6771 6.494059 TGCTAGTATGAGATAGCCCTTCATA 58.506 40.000 2.06 0.00 43.05 2.15
6459 6772 5.336945 TGCTAGTATGAGATAGCCCTTCAT 58.663 41.667 2.06 0.00 43.05 2.57
6460 6773 4.740902 TGCTAGTATGAGATAGCCCTTCA 58.259 43.478 2.06 0.00 43.05 3.02
6461 6774 5.395103 CCATGCTAGTATGAGATAGCCCTTC 60.395 48.000 21.02 0.00 43.05 3.46
6462 6775 4.469227 CCATGCTAGTATGAGATAGCCCTT 59.531 45.833 21.02 0.00 43.05 3.95
6463 6776 4.029520 CCATGCTAGTATGAGATAGCCCT 58.970 47.826 21.02 0.00 43.05 5.19
6464 6777 3.772025 ACCATGCTAGTATGAGATAGCCC 59.228 47.826 21.02 0.00 43.05 5.19
6465 6778 5.186797 AGAACCATGCTAGTATGAGATAGCC 59.813 44.000 21.02 4.39 43.05 3.93
6466 6779 6.279513 AGAACCATGCTAGTATGAGATAGC 57.720 41.667 21.02 5.46 43.81 2.97
6469 6782 8.928448 TCTTTAAGAACCATGCTAGTATGAGAT 58.072 33.333 21.02 7.40 0.00 2.75
6470 6783 8.306313 TCTTTAAGAACCATGCTAGTATGAGA 57.694 34.615 21.02 10.59 0.00 3.27
6471 6784 8.948631 TTCTTTAAGAACCATGCTAGTATGAG 57.051 34.615 21.02 13.44 0.00 2.90
6472 6785 9.733556 TTTTCTTTAAGAACCATGCTAGTATGA 57.266 29.630 21.02 0.00 33.26 2.15
6475 6788 9.787435 TCTTTTTCTTTAAGAACCATGCTAGTA 57.213 29.630 6.93 0.00 33.26 1.82
6476 6789 8.691661 TCTTTTTCTTTAAGAACCATGCTAGT 57.308 30.769 6.93 0.00 33.26 2.57
6477 6790 9.965824 TTTCTTTTTCTTTAAGAACCATGCTAG 57.034 29.630 6.93 0.00 40.33 3.42
6479 6792 9.665719 TTTTTCTTTTTCTTTAAGAACCATGCT 57.334 25.926 6.93 0.00 40.33 3.79
6480 6793 9.702726 GTTTTTCTTTTTCTTTAAGAACCATGC 57.297 29.630 6.93 0.00 40.33 4.06
6483 6796 9.765795 TGTGTTTTTCTTTTTCTTTAAGAACCA 57.234 25.926 6.93 0.00 40.33 3.67
6490 6803 9.765795 TGTCCTTTGTGTTTTTCTTTTTCTTTA 57.234 25.926 0.00 0.00 0.00 1.85
6491 6804 8.669946 TGTCCTTTGTGTTTTTCTTTTTCTTT 57.330 26.923 0.00 0.00 0.00 2.52
6492 6805 8.846943 ATGTCCTTTGTGTTTTTCTTTTTCTT 57.153 26.923 0.00 0.00 0.00 2.52
6493 6806 9.936759 TTATGTCCTTTGTGTTTTTCTTTTTCT 57.063 25.926 0.00 0.00 0.00 2.52
6497 6810 9.883142 TGATTTATGTCCTTTGTGTTTTTCTTT 57.117 25.926 0.00 0.00 0.00 2.52
6499 6812 9.480053 CATGATTTATGTCCTTTGTGTTTTTCT 57.520 29.630 0.00 0.00 31.92 2.52
6517 6830 8.383619 CGGTTTTTGTTTTGTTCACATGATTTA 58.616 29.630 0.00 0.00 0.00 1.40
6518 6831 7.118390 TCGGTTTTTGTTTTGTTCACATGATTT 59.882 29.630 0.00 0.00 0.00 2.17
6519 6832 6.591834 TCGGTTTTTGTTTTGTTCACATGATT 59.408 30.769 0.00 0.00 0.00 2.57
6520 6833 6.102663 TCGGTTTTTGTTTTGTTCACATGAT 58.897 32.000 0.00 0.00 0.00 2.45
6521 6834 5.470368 TCGGTTTTTGTTTTGTTCACATGA 58.530 33.333 0.00 0.00 0.00 3.07
6522 6835 5.220378 CCTCGGTTTTTGTTTTGTTCACATG 60.220 40.000 0.00 0.00 0.00 3.21
6523 6836 4.867608 CCTCGGTTTTTGTTTTGTTCACAT 59.132 37.500 0.00 0.00 0.00 3.21
6524 6837 4.238514 CCTCGGTTTTTGTTTTGTTCACA 58.761 39.130 0.00 0.00 0.00 3.58
6525 6838 4.239304 ACCTCGGTTTTTGTTTTGTTCAC 58.761 39.130 0.00 0.00 0.00 3.18
6526 6839 4.522722 ACCTCGGTTTTTGTTTTGTTCA 57.477 36.364 0.00 0.00 0.00 3.18
6527 6840 6.638063 GGTATACCTCGGTTTTTGTTTTGTTC 59.362 38.462 15.09 0.00 0.00 3.18
6528 6841 6.506147 GGTATACCTCGGTTTTTGTTTTGTT 58.494 36.000 15.09 0.00 0.00 2.83
6529 6842 5.277925 CGGTATACCTCGGTTTTTGTTTTGT 60.278 40.000 19.68 0.00 0.00 2.83
6530 6843 5.049543 TCGGTATACCTCGGTTTTTGTTTTG 60.050 40.000 19.68 0.00 0.00 2.44
6531 6844 5.062528 TCGGTATACCTCGGTTTTTGTTTT 58.937 37.500 19.68 0.00 0.00 2.43
6532 6845 4.640364 TCGGTATACCTCGGTTTTTGTTT 58.360 39.130 19.68 0.00 0.00 2.83
6533 6846 4.270245 TCGGTATACCTCGGTTTTTGTT 57.730 40.909 19.68 0.00 0.00 2.83
6534 6847 3.959535 TCGGTATACCTCGGTTTTTGT 57.040 42.857 19.68 0.00 0.00 2.83
6535 6848 7.011669 ACAATTATCGGTATACCTCGGTTTTTG 59.988 37.037 19.68 14.87 0.00 2.44
6536 6849 7.049754 ACAATTATCGGTATACCTCGGTTTTT 58.950 34.615 19.68 2.59 0.00 1.94
6537 6850 6.585416 ACAATTATCGGTATACCTCGGTTTT 58.415 36.000 19.68 4.08 0.00 2.43
6538 6851 6.165700 ACAATTATCGGTATACCTCGGTTT 57.834 37.500 19.68 5.55 0.00 3.27
6539 6852 5.796424 ACAATTATCGGTATACCTCGGTT 57.204 39.130 19.68 5.63 0.00 4.44
6540 6853 5.302568 TCAACAATTATCGGTATACCTCGGT 59.697 40.000 19.68 6.45 0.00 4.69
6541 6854 5.775686 TCAACAATTATCGGTATACCTCGG 58.224 41.667 19.68 4.70 0.00 4.63
6542 6855 7.143340 TCTTCAACAATTATCGGTATACCTCG 58.857 38.462 19.68 7.71 0.00 4.63
6543 6856 8.882415 TTCTTCAACAATTATCGGTATACCTC 57.118 34.615 19.68 0.00 0.00 3.85
6544 6857 8.701895 TCTTCTTCAACAATTATCGGTATACCT 58.298 33.333 19.68 4.63 0.00 3.08
6545 6858 8.882415 TCTTCTTCAACAATTATCGGTATACC 57.118 34.615 12.27 12.27 0.00 2.73
6548 6861 9.667107 TCTTTCTTCTTCAACAATTATCGGTAT 57.333 29.630 0.00 0.00 0.00 2.73
6549 6862 9.667107 ATCTTTCTTCTTCAACAATTATCGGTA 57.333 29.630 0.00 0.00 0.00 4.02
6550 6863 7.979444 TCTTTCTTCTTCAACAATTATCGGT 57.021 32.000 0.00 0.00 0.00 4.69
6551 6864 7.912250 CCATCTTTCTTCTTCAACAATTATCGG 59.088 37.037 0.00 0.00 0.00 4.18
6552 6865 7.912250 CCCATCTTTCTTCTTCAACAATTATCG 59.088 37.037 0.00 0.00 0.00 2.92
6553 6866 8.960591 TCCCATCTTTCTTCTTCAACAATTATC 58.039 33.333 0.00 0.00 0.00 1.75
6554 6867 8.884124 TCCCATCTTTCTTCTTCAACAATTAT 57.116 30.769 0.00 0.00 0.00 1.28
6555 6868 8.742777 CATCCCATCTTTCTTCTTCAACAATTA 58.257 33.333 0.00 0.00 0.00 1.40
6556 6869 7.609056 CATCCCATCTTTCTTCTTCAACAATT 58.391 34.615 0.00 0.00 0.00 2.32
6557 6870 6.350780 GCATCCCATCTTTCTTCTTCAACAAT 60.351 38.462 0.00 0.00 0.00 2.71
6558 6871 5.047802 GCATCCCATCTTTCTTCTTCAACAA 60.048 40.000 0.00 0.00 0.00 2.83
6559 6872 4.460382 GCATCCCATCTTTCTTCTTCAACA 59.540 41.667 0.00 0.00 0.00 3.33
6560 6873 4.142293 GGCATCCCATCTTTCTTCTTCAAC 60.142 45.833 0.00 0.00 0.00 3.18
6561 6874 4.019174 GGCATCCCATCTTTCTTCTTCAA 58.981 43.478 0.00 0.00 0.00 2.69
6562 6875 3.010472 TGGCATCCCATCTTTCTTCTTCA 59.990 43.478 0.00 0.00 35.79 3.02
6563 6876 3.624777 TGGCATCCCATCTTTCTTCTTC 58.375 45.455 0.00 0.00 35.79 2.87
6564 6877 3.744940 TGGCATCCCATCTTTCTTCTT 57.255 42.857 0.00 0.00 35.79 2.52
6565 6878 3.359950 GTTGGCATCCCATCTTTCTTCT 58.640 45.455 0.00 0.00 41.78 2.85
6566 6879 2.428530 GGTTGGCATCCCATCTTTCTTC 59.571 50.000 3.03 0.00 41.78 2.87
6567 6880 2.460669 GGTTGGCATCCCATCTTTCTT 58.539 47.619 3.03 0.00 41.78 2.52
6568 6881 1.683011 CGGTTGGCATCCCATCTTTCT 60.683 52.381 8.97 0.00 41.78 2.52
6569 6882 0.740737 CGGTTGGCATCCCATCTTTC 59.259 55.000 8.97 0.00 41.78 2.62
6570 6883 0.684153 CCGGTTGGCATCCCATCTTT 60.684 55.000 8.97 0.00 41.78 2.52
6571 6884 1.076777 CCGGTTGGCATCCCATCTT 60.077 57.895 8.97 0.00 41.78 2.40
6572 6885 2.597340 CCGGTTGGCATCCCATCT 59.403 61.111 8.97 0.00 41.78 2.90
6573 6886 2.519302 CCCGGTTGGCATCCCATC 60.519 66.667 8.97 0.00 41.78 3.51
6574 6887 4.141876 CCCCGGTTGGCATCCCAT 62.142 66.667 8.97 0.00 41.78 4.00
6589 6902 0.683179 ATTTAAGCTTGGGGACGCCC 60.683 55.000 9.86 6.38 44.51 6.13
6590 6903 0.455815 CATTTAAGCTTGGGGACGCC 59.544 55.000 9.86 0.53 0.00 5.68
6591 6904 0.179137 GCATTTAAGCTTGGGGACGC 60.179 55.000 9.86 0.34 0.00 5.19
6592 6905 1.463674 AGCATTTAAGCTTGGGGACG 58.536 50.000 9.86 0.00 43.70 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.