Multiple sequence alignment - TraesCS1B01G057500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G057500 chr1B 100.000 3974 0 0 1 3974 39731139 39735112 0.000000e+00 7339
1 TraesCS1B01G057500 chr1B 92.480 2141 126 18 1587 3698 16225149 16223015 0.000000e+00 3029
2 TraesCS1B01G057500 chr1B 89.833 1436 133 9 1718 3145 39814791 39816221 0.000000e+00 1831
3 TraesCS1B01G057500 chr1B 97.222 828 21 1 3147 3974 23599542 23600367 0.000000e+00 1400
4 TraesCS1B01G057500 chr1B 96.498 828 25 3 3147 3974 23898318 23899141 0.000000e+00 1365
5 TraesCS1B01G057500 chr1B 84.886 569 57 16 3147 3698 39816250 39816806 7.510000e-152 547
6 TraesCS1B01G057500 chr1B 82.470 502 55 15 1001 1471 23597453 23597952 3.700000e-110 409
7 TraesCS1B01G057500 chr1B 82.470 502 55 15 1001 1471 23896229 23896728 3.700000e-110 409
8 TraesCS1B01G057500 chr1B 94.561 239 12 1 3728 3966 16222798 16222561 6.270000e-98 368
9 TraesCS1B01G057500 chr1B 92.713 247 17 1 3729 3974 39809202 39809448 4.880000e-94 355
10 TraesCS1B01G057500 chr1B 94.884 215 11 0 1090 1304 39814257 39814471 1.770000e-88 337
11 TraesCS1B01G057500 chr1B 93.243 222 15 0 3733 3954 39817106 39817327 1.060000e-85 327
12 TraesCS1B01G057500 chr1B 82.880 368 50 12 933 1293 16225733 16225372 6.410000e-83 318
13 TraesCS1B01G057500 chr1B 91.971 137 8 3 1337 1471 16225282 16225147 5.240000e-44 189
14 TraesCS1B01G057500 chr1A 91.248 2148 147 19 1586 3698 13212902 13215043 0.000000e+00 2887
15 TraesCS1B01G057500 chr1A 93.075 1574 97 10 1586 3151 13009394 13007825 0.000000e+00 2292
16 TraesCS1B01G057500 chr1A 93.062 1571 97 10 1586 3148 13229513 13231079 0.000000e+00 2287
17 TraesCS1B01G057500 chr1A 91.909 1409 107 6 1592 2998 22790729 22789326 0.000000e+00 1964
18 TraesCS1B01G057500 chr1A 93.961 828 43 3 3147 3974 13231105 13231925 0.000000e+00 1245
19 TraesCS1B01G057500 chr1A 82.995 641 56 24 680 1293 13228699 13229313 7.560000e-147 531
20 TraesCS1B01G057500 chr1A 84.778 519 49 13 3147 3658 22778720 22778225 9.920000e-136 494
21 TraesCS1B01G057500 chr1A 87.688 398 37 10 1074 1471 13006356 13005971 1.680000e-123 453
22 TraesCS1B01G057500 chr1A 88.820 322 33 3 967 1285 13266792 13267113 3.720000e-105 392
23 TraesCS1B01G057500 chr1A 89.677 310 26 2 967 1276 22773324 22773021 1.340000e-104 390
24 TraesCS1B01G057500 chr1A 92.115 279 17 3 3421 3698 13007700 13007426 4.820000e-104 388
25 TraesCS1B01G057500 chr1A 93.117 247 17 0 3728 3974 13215240 13215486 2.920000e-96 363
26 TraesCS1B01G057500 chr1A 93.117 247 17 0 3728 3974 13258103 13258349 2.920000e-96 363
27 TraesCS1B01G057500 chr1A 80.370 433 55 17 167 579 13227910 13228332 6.450000e-78 302
28 TraesCS1B01G057500 chr1A 95.349 129 5 1 1462 1590 569891806 569891933 1.870000e-48 204
29 TraesCS1B01G057500 chr1A 91.176 136 11 1 3012 3146 13257203 13257338 2.440000e-42 183
30 TraesCS1B01G057500 chr1D 93.115 1438 94 4 1717 3151 10775143 10773708 0.000000e+00 2102
31 TraesCS1B01G057500 chr1D 92.580 1415 90 7 1587 2998 10763803 10762401 0.000000e+00 2017
32 TraesCS1B01G057500 chr1D 91.773 1410 104 9 1587 2992 10844347 10845748 0.000000e+00 1951
33 TraesCS1B01G057500 chr1D 88.889 711 43 10 3021 3698 10762293 10761586 0.000000e+00 843
34 TraesCS1B01G057500 chr1D 92.280 557 35 2 3147 3698 10773685 10773132 0.000000e+00 784
35 TraesCS1B01G057500 chr1D 85.152 559 46 11 3147 3698 10846016 10846544 4.520000e-149 538
36 TraesCS1B01G057500 chr1D 92.355 327 25 0 967 1293 10764337 10764011 2.160000e-127 466
37 TraesCS1B01G057500 chr1D 89.457 313 26 4 967 1272 10894115 10894427 4.820000e-104 388
38 TraesCS1B01G057500 chr1D 84.456 386 49 8 932 1308 10843754 10844137 1.740000e-98 370
39 TraesCS1B01G057500 chr1D 95.327 214 10 0 3728 3941 10761367 10761154 1.370000e-89 340
40 TraesCS1B01G057500 chr1D 94.268 157 5 1 1319 1471 10844193 10844349 1.850000e-58 237
41 TraesCS1B01G057500 chr1D 84.553 123 10 2 1353 1471 10763918 10763801 3.250000e-21 113
42 TraesCS1B01G057500 chr3A 98.319 119 2 0 1472 1590 329189780 329189898 4.020000e-50 209
43 TraesCS1B01G057500 chr6A 98.305 118 2 0 1473 1590 464513311 464513194 1.450000e-49 207
44 TraesCS1B01G057500 chr5B 96.800 125 2 2 1467 1589 281173821 281173945 1.450000e-49 207
45 TraesCS1B01G057500 chr2B 97.500 120 3 0 1471 1590 620927722 620927841 5.210000e-49 206
46 TraesCS1B01G057500 chr2B 95.968 124 5 0 1472 1595 653633470 653633347 6.730000e-48 202
47 TraesCS1B01G057500 chr7B 96.721 122 4 0 1469 1590 700572722 700572843 1.870000e-48 204
48 TraesCS1B01G057500 chr3B 96.000 125 4 1 1473 1596 655032862 655032738 6.730000e-48 202
49 TraesCS1B01G057500 chr5D 93.939 132 8 0 1472 1603 462793853 462793984 2.420000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G057500 chr1B 39731139 39735112 3973 False 7339.000000 7339 100.000000 1 3974 1 chr1B.!!$F1 3973
1 TraesCS1B01G057500 chr1B 16222561 16225733 3172 True 976.000000 3029 90.473000 933 3966 4 chr1B.!!$R1 3033
2 TraesCS1B01G057500 chr1B 23597453 23600367 2914 False 904.500000 1400 89.846000 1001 3974 2 chr1B.!!$F3 2973
3 TraesCS1B01G057500 chr1B 23896229 23899141 2912 False 887.000000 1365 89.484000 1001 3974 2 chr1B.!!$F4 2973
4 TraesCS1B01G057500 chr1B 39814257 39817327 3070 False 760.500000 1831 90.711500 1090 3954 4 chr1B.!!$F5 2864
5 TraesCS1B01G057500 chr1A 22789326 22790729 1403 True 1964.000000 1964 91.909000 1592 2998 1 chr1A.!!$R3 1406
6 TraesCS1B01G057500 chr1A 13212902 13215486 2584 False 1625.000000 2887 92.182500 1586 3974 2 chr1A.!!$F3 2388
7 TraesCS1B01G057500 chr1A 13227910 13231925 4015 False 1091.250000 2287 87.597000 167 3974 4 chr1A.!!$F4 3807
8 TraesCS1B01G057500 chr1A 13005971 13009394 3423 True 1044.333333 2292 90.959333 1074 3698 3 chr1A.!!$R4 2624
9 TraesCS1B01G057500 chr1A 13257203 13258349 1146 False 273.000000 363 92.146500 3012 3974 2 chr1A.!!$F5 962
10 TraesCS1B01G057500 chr1D 10773132 10775143 2011 True 1443.000000 2102 92.697500 1717 3698 2 chr1D.!!$R2 1981
11 TraesCS1B01G057500 chr1D 10843754 10846544 2790 False 774.000000 1951 88.912250 932 3698 4 chr1D.!!$F2 2766
12 TraesCS1B01G057500 chr1D 10761154 10764337 3183 True 755.800000 2017 90.740800 967 3941 5 chr1D.!!$R1 2974

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
846 1139 0.033781 GATGTTGCTTTGCCTTGGCA 59.966 50.000 10.65 10.65 0.00 4.92 F
1022 1339 0.173708 GCGTCTGTAGAGGAGTTGGG 59.826 60.000 5.82 0.00 32.08 4.12 F
1496 1878 1.067212 CCCTCTGTCCGGAAATACTCG 59.933 57.143 5.23 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1867 2397 1.109323 AGTGAACAGCCCCAGTTTGC 61.109 55.000 0.0 0.0 0.00 3.68 R
2321 2866 1.610038 TGCTCATCCAAACACTGCTTG 59.390 47.619 0.0 0.0 0.00 4.01 R
3171 3842 0.743688 TGACAAAACGCCAAGTGCAT 59.256 45.000 0.0 0.0 41.33 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.063529 TGCGCAACCTTCTTCCTG 57.936 55.556 8.16 0.00 0.00 3.86
18 19 1.600636 TGCGCAACCTTCTTCCTGG 60.601 57.895 8.16 0.00 0.00 4.45
19 20 2.335712 GCGCAACCTTCTTCCTGGG 61.336 63.158 0.30 0.00 0.00 4.45
20 21 1.675641 CGCAACCTTCTTCCTGGGG 60.676 63.158 0.00 0.00 0.00 4.96
21 22 1.979155 GCAACCTTCTTCCTGGGGC 60.979 63.158 0.00 0.00 0.00 5.80
22 23 1.460255 CAACCTTCTTCCTGGGGCA 59.540 57.895 0.00 0.00 0.00 5.36
23 24 0.895559 CAACCTTCTTCCTGGGGCAC 60.896 60.000 0.00 0.00 0.00 5.01
24 25 1.068352 AACCTTCTTCCTGGGGCACT 61.068 55.000 0.00 0.00 0.00 4.40
25 26 1.068352 ACCTTCTTCCTGGGGCACTT 61.068 55.000 0.00 0.00 0.00 3.16
26 27 0.322906 CCTTCTTCCTGGGGCACTTC 60.323 60.000 0.00 0.00 0.00 3.01
27 28 0.322906 CTTCTTCCTGGGGCACTTCC 60.323 60.000 0.00 0.00 0.00 3.46
28 29 0.772124 TTCTTCCTGGGGCACTTCCT 60.772 55.000 0.00 0.00 34.39 3.36
29 30 0.118346 TCTTCCTGGGGCACTTCCTA 59.882 55.000 0.00 0.00 34.39 2.94
30 31 0.543749 CTTCCTGGGGCACTTCCTAG 59.456 60.000 0.00 0.00 35.46 3.02
31 32 0.178873 TTCCTGGGGCACTTCCTAGT 60.179 55.000 0.00 0.00 34.07 2.57
32 33 0.714180 TCCTGGGGCACTTCCTAGTA 59.286 55.000 0.00 0.00 34.07 1.82
33 34 1.123928 CCTGGGGCACTTCCTAGTAG 58.876 60.000 0.00 0.00 34.07 2.57
34 35 1.343075 CCTGGGGCACTTCCTAGTAGA 60.343 57.143 0.00 0.00 34.07 2.59
35 36 1.757699 CTGGGGCACTTCCTAGTAGAC 59.242 57.143 0.00 0.00 31.96 2.59
36 37 0.745468 GGGGCACTTCCTAGTAGACG 59.255 60.000 0.00 0.00 31.96 4.18
37 38 1.684248 GGGGCACTTCCTAGTAGACGA 60.684 57.143 0.00 0.00 31.96 4.20
38 39 1.677052 GGGCACTTCCTAGTAGACGAG 59.323 57.143 0.00 0.00 31.96 4.18
39 40 1.065851 GGCACTTCCTAGTAGACGAGC 59.934 57.143 0.00 0.00 31.96 5.03
40 41 1.065851 GCACTTCCTAGTAGACGAGCC 59.934 57.143 0.00 0.00 31.96 4.70
41 42 2.366533 CACTTCCTAGTAGACGAGCCA 58.633 52.381 0.00 0.00 31.96 4.75
42 43 2.356382 CACTTCCTAGTAGACGAGCCAG 59.644 54.545 0.00 0.00 31.96 4.85
43 44 1.335496 CTTCCTAGTAGACGAGCCAGC 59.665 57.143 0.00 0.00 0.00 4.85
44 45 0.547075 TCCTAGTAGACGAGCCAGCT 59.453 55.000 0.00 0.00 0.00 4.24
45 46 0.665835 CCTAGTAGACGAGCCAGCTG 59.334 60.000 6.78 6.78 0.00 4.24
46 47 1.669604 CTAGTAGACGAGCCAGCTGA 58.330 55.000 17.39 0.00 0.00 4.26
47 48 1.601903 CTAGTAGACGAGCCAGCTGAG 59.398 57.143 17.39 6.56 0.00 3.35
48 49 1.034838 AGTAGACGAGCCAGCTGAGG 61.035 60.000 17.39 0.00 0.00 3.86
59 60 3.612681 GCTGAGGCGGCCGGTATA 61.613 66.667 29.38 0.00 0.00 1.47
60 61 2.651361 CTGAGGCGGCCGGTATAG 59.349 66.667 29.38 5.10 0.00 1.31
61 62 2.123597 TGAGGCGGCCGGTATAGT 60.124 61.111 29.38 0.00 0.00 2.12
62 63 2.338984 GAGGCGGCCGGTATAGTG 59.661 66.667 29.38 0.00 0.00 2.74
63 64 2.123597 AGGCGGCCGGTATAGTGA 60.124 61.111 29.38 0.00 0.00 3.41
64 65 1.533273 AGGCGGCCGGTATAGTGAT 60.533 57.895 29.38 0.00 0.00 3.06
65 66 1.374252 GGCGGCCGGTATAGTGATG 60.374 63.158 29.38 0.00 0.00 3.07
66 67 1.374252 GCGGCCGGTATAGTGATGG 60.374 63.158 29.38 0.00 0.00 3.51
67 68 1.812686 GCGGCCGGTATAGTGATGGA 61.813 60.000 29.38 0.00 0.00 3.41
68 69 0.243907 CGGCCGGTATAGTGATGGAG 59.756 60.000 20.10 0.00 0.00 3.86
69 70 0.037232 GGCCGGTATAGTGATGGAGC 60.037 60.000 1.90 0.00 0.00 4.70
70 71 0.388649 GCCGGTATAGTGATGGAGCG 60.389 60.000 1.90 0.00 0.00 5.03
71 72 0.243907 CCGGTATAGTGATGGAGCGG 59.756 60.000 0.00 0.00 45.31 5.52
72 73 0.388649 CGGTATAGTGATGGAGCGGC 60.389 60.000 0.00 0.00 0.00 6.53
73 74 0.037232 GGTATAGTGATGGAGCGGCC 60.037 60.000 0.00 0.00 37.10 6.13
81 82 4.100084 TGGAGCGGCCATGGTGAG 62.100 66.667 14.67 6.25 43.33 3.51
82 83 3.785859 GGAGCGGCCATGGTGAGA 61.786 66.667 14.67 0.00 36.34 3.27
83 84 2.202987 GAGCGGCCATGGTGAGAG 60.203 66.667 14.67 1.77 0.00 3.20
84 85 2.685017 AGCGGCCATGGTGAGAGA 60.685 61.111 14.67 0.00 0.00 3.10
85 86 2.202987 GCGGCCATGGTGAGAGAG 60.203 66.667 14.67 0.00 0.00 3.20
86 87 2.725312 GCGGCCATGGTGAGAGAGA 61.725 63.158 14.67 0.00 0.00 3.10
87 88 1.440893 CGGCCATGGTGAGAGAGAG 59.559 63.158 14.67 0.00 0.00 3.20
88 89 1.039785 CGGCCATGGTGAGAGAGAGA 61.040 60.000 14.67 0.00 0.00 3.10
89 90 1.198713 GGCCATGGTGAGAGAGAGAA 58.801 55.000 14.67 0.00 0.00 2.87
90 91 1.134551 GGCCATGGTGAGAGAGAGAAC 60.135 57.143 14.67 0.00 0.00 3.01
91 92 1.470632 GCCATGGTGAGAGAGAGAACG 60.471 57.143 14.67 0.00 0.00 3.95
92 93 2.095461 CCATGGTGAGAGAGAGAACGA 58.905 52.381 2.57 0.00 0.00 3.85
93 94 2.098934 CCATGGTGAGAGAGAGAACGAG 59.901 54.545 2.57 0.00 0.00 4.18
94 95 2.861147 TGGTGAGAGAGAGAACGAGA 57.139 50.000 0.00 0.00 0.00 4.04
95 96 2.705730 TGGTGAGAGAGAGAACGAGAG 58.294 52.381 0.00 0.00 0.00 3.20
96 97 2.303311 TGGTGAGAGAGAGAACGAGAGA 59.697 50.000 0.00 0.00 0.00 3.10
97 98 2.936498 GGTGAGAGAGAGAACGAGAGAG 59.064 54.545 0.00 0.00 0.00 3.20
98 99 3.369052 GGTGAGAGAGAGAACGAGAGAGA 60.369 52.174 0.00 0.00 0.00 3.10
99 100 3.865745 GTGAGAGAGAGAACGAGAGAGAG 59.134 52.174 0.00 0.00 0.00 3.20
100 101 2.866762 GAGAGAGAGAACGAGAGAGAGC 59.133 54.545 0.00 0.00 0.00 4.09
101 102 1.593006 GAGAGAGAACGAGAGAGAGCG 59.407 57.143 0.00 0.00 0.00 5.03
102 103 1.206132 AGAGAGAACGAGAGAGAGCGA 59.794 52.381 0.00 0.00 0.00 4.93
103 104 1.593006 GAGAGAACGAGAGAGAGCGAG 59.407 57.143 0.00 0.00 0.00 5.03
104 105 1.206132 AGAGAACGAGAGAGAGCGAGA 59.794 52.381 0.00 0.00 0.00 4.04
105 106 1.593006 GAGAACGAGAGAGAGCGAGAG 59.407 57.143 0.00 0.00 0.00 3.20
106 107 1.206132 AGAACGAGAGAGAGCGAGAGA 59.794 52.381 0.00 0.00 0.00 3.10
107 108 1.593006 GAACGAGAGAGAGCGAGAGAG 59.407 57.143 0.00 0.00 0.00 3.20
108 109 0.810031 ACGAGAGAGAGCGAGAGAGC 60.810 60.000 0.00 0.00 37.41 4.09
109 110 1.821241 CGAGAGAGAGCGAGAGAGCG 61.821 65.000 0.00 0.00 43.00 5.03
110 111 0.529773 GAGAGAGAGCGAGAGAGCGA 60.530 60.000 0.00 0.00 43.00 4.93
111 112 0.530650 AGAGAGAGCGAGAGAGCGAG 60.531 60.000 0.00 0.00 43.00 5.03
112 113 0.529773 GAGAGAGCGAGAGAGCGAGA 60.530 60.000 0.00 0.00 43.00 4.04
113 114 0.530650 AGAGAGCGAGAGAGCGAGAG 60.531 60.000 0.00 0.00 43.00 3.20
114 115 0.529773 GAGAGCGAGAGAGCGAGAGA 60.530 60.000 0.00 0.00 43.00 3.10
115 116 0.530650 AGAGCGAGAGAGCGAGAGAG 60.531 60.000 0.00 0.00 43.00 3.20
116 117 0.529773 GAGCGAGAGAGCGAGAGAGA 60.530 60.000 0.00 0.00 43.00 3.10
117 118 0.530650 AGCGAGAGAGCGAGAGAGAG 60.531 60.000 0.00 0.00 43.00 3.20
118 119 1.498865 GCGAGAGAGCGAGAGAGAGG 61.499 65.000 0.00 0.00 0.00 3.69
119 120 0.104120 CGAGAGAGCGAGAGAGAGGA 59.896 60.000 0.00 0.00 0.00 3.71
120 121 1.583054 GAGAGAGCGAGAGAGAGGAC 58.417 60.000 0.00 0.00 0.00 3.85
121 122 0.908910 AGAGAGCGAGAGAGAGGACA 59.091 55.000 0.00 0.00 0.00 4.02
122 123 1.014352 GAGAGCGAGAGAGAGGACAC 58.986 60.000 0.00 0.00 0.00 3.67
123 124 0.742990 AGAGCGAGAGAGAGGACACG 60.743 60.000 0.00 0.00 0.00 4.49
124 125 1.711060 GAGCGAGAGAGAGGACACGG 61.711 65.000 0.00 0.00 0.00 4.94
125 126 1.745864 GCGAGAGAGAGGACACGGA 60.746 63.158 0.00 0.00 0.00 4.69
126 127 1.711060 GCGAGAGAGAGGACACGGAG 61.711 65.000 0.00 0.00 0.00 4.63
127 128 0.108089 CGAGAGAGAGGACACGGAGA 60.108 60.000 0.00 0.00 0.00 3.71
128 129 1.663695 GAGAGAGAGGACACGGAGAG 58.336 60.000 0.00 0.00 0.00 3.20
129 130 1.208535 GAGAGAGAGGACACGGAGAGA 59.791 57.143 0.00 0.00 0.00 3.10
130 131 1.209504 AGAGAGAGGACACGGAGAGAG 59.790 57.143 0.00 0.00 0.00 3.20
131 132 1.208535 GAGAGAGGACACGGAGAGAGA 59.791 57.143 0.00 0.00 0.00 3.10
132 133 1.209504 AGAGAGGACACGGAGAGAGAG 59.790 57.143 0.00 0.00 0.00 3.20
133 134 1.208535 GAGAGGACACGGAGAGAGAGA 59.791 57.143 0.00 0.00 0.00 3.10
134 135 1.209504 AGAGGACACGGAGAGAGAGAG 59.790 57.143 0.00 0.00 0.00 3.20
135 136 1.208535 GAGGACACGGAGAGAGAGAGA 59.791 57.143 0.00 0.00 0.00 3.10
136 137 1.209504 AGGACACGGAGAGAGAGAGAG 59.790 57.143 0.00 0.00 0.00 3.20
137 138 1.208535 GGACACGGAGAGAGAGAGAGA 59.791 57.143 0.00 0.00 0.00 3.10
138 139 2.550978 GACACGGAGAGAGAGAGAGAG 58.449 57.143 0.00 0.00 0.00 3.20
139 140 2.167693 GACACGGAGAGAGAGAGAGAGA 59.832 54.545 0.00 0.00 0.00 3.10
140 141 2.168521 ACACGGAGAGAGAGAGAGAGAG 59.831 54.545 0.00 0.00 0.00 3.20
141 142 1.139058 ACGGAGAGAGAGAGAGAGAGC 59.861 57.143 0.00 0.00 0.00 4.09
142 143 1.869754 CGGAGAGAGAGAGAGAGAGCG 60.870 61.905 0.00 0.00 0.00 5.03
143 144 1.412710 GGAGAGAGAGAGAGAGAGCGA 59.587 57.143 0.00 0.00 0.00 4.93
144 145 2.546795 GGAGAGAGAGAGAGAGAGCGAG 60.547 59.091 0.00 0.00 0.00 5.03
145 146 2.362397 GAGAGAGAGAGAGAGAGCGAGA 59.638 54.545 0.00 0.00 0.00 4.04
146 147 2.363680 AGAGAGAGAGAGAGAGCGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
159 160 3.058115 CGAGAGCGAGTGAGAGAGA 57.942 57.895 0.00 0.00 40.82 3.10
160 161 0.930310 CGAGAGCGAGTGAGAGAGAG 59.070 60.000 0.00 0.00 40.82 3.20
161 162 1.299541 GAGAGCGAGTGAGAGAGAGG 58.700 60.000 0.00 0.00 0.00 3.69
162 163 0.908910 AGAGCGAGTGAGAGAGAGGA 59.091 55.000 0.00 0.00 0.00 3.71
163 164 1.014352 GAGCGAGTGAGAGAGAGGAC 58.986 60.000 0.00 0.00 0.00 3.85
164 165 0.326595 AGCGAGTGAGAGAGAGGACA 59.673 55.000 0.00 0.00 0.00 4.02
165 166 0.450184 GCGAGTGAGAGAGAGGACAC 59.550 60.000 0.00 0.00 0.00 3.67
190 192 2.775384 GAGAGAGAGAGACCTAGGGACA 59.225 54.545 14.81 0.00 0.00 4.02
191 193 3.394606 GAGAGAGAGAGACCTAGGGACAT 59.605 52.174 14.81 0.00 0.00 3.06
194 196 1.933765 AGAGAGACCTAGGGACATGGT 59.066 52.381 14.81 0.00 38.75 3.55
206 208 6.543831 CCTAGGGACATGGTAATGAAAAGAAG 59.456 42.308 0.00 0.00 37.24 2.85
207 209 6.139679 AGGGACATGGTAATGAAAAGAAGA 57.860 37.500 0.00 0.00 37.24 2.87
211 213 8.314021 GGGACATGGTAATGAAAAGAAGAAATT 58.686 33.333 0.00 0.00 37.24 1.82
223 226 4.657814 AGAAGAAATTCTACAAGGGCCA 57.342 40.909 6.18 0.00 0.00 5.36
229 232 2.969821 TTCTACAAGGGCCACATTGT 57.030 45.000 20.00 20.00 42.15 2.71
243 246 5.367302 GCCACATTGTATAAATGCCCAATT 58.633 37.500 0.00 0.00 0.00 2.32
247 250 7.201626 CCACATTGTATAAATGCCCAATTGTTG 60.202 37.037 4.43 0.00 0.00 3.33
248 251 6.315891 ACATTGTATAAATGCCCAATTGTTGC 59.684 34.615 4.43 7.43 0.00 4.17
250 253 2.376808 TAAATGCCCAATTGTTGCCG 57.623 45.000 12.93 0.00 0.00 5.69
252 255 0.320596 AATGCCCAATTGTTGCCGTG 60.321 50.000 12.93 0.00 0.00 4.94
255 258 3.770589 CCAATTGTTGCCGTGGGA 58.229 55.556 4.43 0.00 0.00 4.37
256 259 2.275880 CCAATTGTTGCCGTGGGAT 58.724 52.632 4.43 0.00 0.00 3.85
257 260 0.173255 CCAATTGTTGCCGTGGGATC 59.827 55.000 4.43 0.00 0.00 3.36
258 261 1.176527 CAATTGTTGCCGTGGGATCT 58.823 50.000 0.00 0.00 0.00 2.75
259 262 1.133025 CAATTGTTGCCGTGGGATCTC 59.867 52.381 0.00 0.00 0.00 2.75
277 283 3.495729 CCACCTGGGCCTTACAGT 58.504 61.111 4.53 0.00 34.16 3.55
289 295 4.735132 TACAGTCGGCGTGGCTGC 62.735 66.667 21.26 0.00 34.49 5.25
306 312 2.972505 CGGTCAAAGTGCCACGCT 60.973 61.111 0.00 0.00 0.00 5.07
307 313 1.666553 CGGTCAAAGTGCCACGCTA 60.667 57.895 0.00 0.00 0.00 4.26
309 315 0.602905 GGTCAAAGTGCCACGCTAGT 60.603 55.000 0.00 0.00 0.00 2.57
310 316 0.790814 GTCAAAGTGCCACGCTAGTC 59.209 55.000 0.00 0.00 0.00 2.59
311 317 0.391228 TCAAAGTGCCACGCTAGTCA 59.609 50.000 0.00 0.00 0.00 3.41
312 318 1.202592 TCAAAGTGCCACGCTAGTCAA 60.203 47.619 0.00 0.00 0.00 3.18
314 320 1.442769 AAGTGCCACGCTAGTCAATG 58.557 50.000 0.00 0.00 0.00 2.82
315 321 0.391661 AGTGCCACGCTAGTCAATGG 60.392 55.000 0.00 0.00 35.17 3.16
326 336 4.261952 CGCTAGTCAATGGTGATGAGAGAT 60.262 45.833 0.00 0.00 35.80 2.75
359 369 6.390721 TCTGAGATGGACGACTTAAAAAGAG 58.609 40.000 0.00 0.00 0.00 2.85
363 373 8.311836 TGAGATGGACGACTTAAAAAGAGTTAT 58.688 33.333 0.00 0.00 0.00 1.89
366 376 9.099454 GATGGACGACTTAAAAAGAGTTATGAT 57.901 33.333 0.00 0.00 0.00 2.45
370 380 8.842358 ACGACTTAAAAAGAGTTATGATCCAA 57.158 30.769 0.00 0.00 0.00 3.53
391 401 8.674263 TCCAAATGTGCATTTTCAAAGTATTT 57.326 26.923 7.36 0.00 38.84 1.40
408 419 6.134535 AGTATTTGGACCCAGTGACAATTA 57.865 37.500 0.00 0.00 0.00 1.40
409 420 6.731467 AGTATTTGGACCCAGTGACAATTAT 58.269 36.000 0.00 0.00 0.00 1.28
410 421 5.920193 ATTTGGACCCAGTGACAATTATG 57.080 39.130 0.00 0.00 0.00 1.90
411 422 4.380843 TTGGACCCAGTGACAATTATGT 57.619 40.909 0.00 0.00 44.25 2.29
415 426 4.949856 GGACCCAGTGACAATTATGTGAAT 59.050 41.667 0.00 0.00 40.74 2.57
544 589 5.048504 GGGGTAGCGCTTTAAGTTAAGTTTT 60.049 40.000 18.68 0.00 0.00 2.43
846 1139 0.033781 GATGTTGCTTTGCCTTGGCA 59.966 50.000 10.65 10.65 0.00 4.92
847 1140 0.469070 ATGTTGCTTTGCCTTGGCAA 59.531 45.000 21.59 21.59 42.54 4.52
848 1141 4.852962 TTGCTTTGCCTTGGCAAC 57.147 50.000 24.65 15.52 40.38 4.17
849 1142 1.227205 TTGCTTTGCCTTGGCAACG 60.227 52.632 24.65 23.00 40.38 4.10
850 1143 2.356194 GCTTTGCCTTGGCAACGG 60.356 61.111 24.65 20.01 42.51 4.44
851 1144 2.339712 CTTTGCCTTGGCAACGGG 59.660 61.111 24.65 14.51 42.51 5.28
922 1230 7.667219 AGCATAAGAATCAACAAAGAGGAAAGA 59.333 33.333 0.00 0.00 0.00 2.52
923 1231 8.299570 GCATAAGAATCAACAAAGAGGAAAGAA 58.700 33.333 0.00 0.00 0.00 2.52
957 1265 2.488153 GCTGTTAGGGTTTGCTCGATTT 59.512 45.455 0.00 0.00 0.00 2.17
1022 1339 0.173708 GCGTCTGTAGAGGAGTTGGG 59.826 60.000 5.82 0.00 32.08 4.12
1068 1397 2.863137 CGAGCCTTTCTTCTATGACAGC 59.137 50.000 0.00 0.00 0.00 4.40
1309 1638 5.133322 TGGCCTCTATCTTCATCCTCAATTT 59.867 40.000 3.32 0.00 0.00 1.82
1310 1639 5.704978 GGCCTCTATCTTCATCCTCAATTTC 59.295 44.000 0.00 0.00 0.00 2.17
1314 1643 6.294473 TCTATCTTCATCCTCAATTTCTGGC 58.706 40.000 0.00 0.00 0.00 4.85
1318 1700 4.038271 TCATCCTCAATTTCTGGCTGTT 57.962 40.909 0.00 0.00 0.00 3.16
1323 1705 6.061022 TCCTCAATTTCTGGCTGTTATGTA 57.939 37.500 0.00 0.00 0.00 2.29
1329 1711 4.422073 TTCTGGCTGTTATGTATGGGAG 57.578 45.455 0.00 0.00 0.00 4.30
1330 1712 3.384168 TCTGGCTGTTATGTATGGGAGT 58.616 45.455 0.00 0.00 0.00 3.85
1340 1722 7.332557 TGTTATGTATGGGAGTTGAATTACGT 58.667 34.615 0.00 0.00 0.00 3.57
1342 1724 9.316730 GTTATGTATGGGAGTTGAATTACGTTA 57.683 33.333 0.00 0.00 0.00 3.18
1343 1725 7.781548 ATGTATGGGAGTTGAATTACGTTAC 57.218 36.000 0.00 0.00 0.00 2.50
1344 1726 6.699366 TGTATGGGAGTTGAATTACGTTACA 58.301 36.000 0.00 0.00 0.00 2.41
1345 1727 6.814644 TGTATGGGAGTTGAATTACGTTACAG 59.185 38.462 0.00 0.00 0.00 2.74
1346 1728 3.998341 TGGGAGTTGAATTACGTTACAGC 59.002 43.478 0.00 0.00 0.00 4.40
1347 1729 3.998341 GGGAGTTGAATTACGTTACAGCA 59.002 43.478 0.00 0.00 0.00 4.41
1348 1730 4.092968 GGGAGTTGAATTACGTTACAGCAG 59.907 45.833 0.00 0.00 0.00 4.24
1350 1732 4.890088 AGTTGAATTACGTTACAGCAGGA 58.110 39.130 0.00 0.00 0.00 3.86
1351 1733 5.488341 AGTTGAATTACGTTACAGCAGGAT 58.512 37.500 0.00 0.00 0.00 3.24
1352 1734 5.351465 AGTTGAATTACGTTACAGCAGGATG 59.649 40.000 0.00 0.00 40.87 3.51
1353 1735 4.827692 TGAATTACGTTACAGCAGGATGT 58.172 39.130 0.00 0.00 39.31 3.06
1356 1738 5.796350 ATTACGTTACAGCAGGATGTTTC 57.204 39.130 0.00 0.00 39.31 2.78
1357 1739 3.120321 ACGTTACAGCAGGATGTTTCA 57.880 42.857 0.00 0.00 39.31 2.69
1358 1740 2.806244 ACGTTACAGCAGGATGTTTCAC 59.194 45.455 0.00 0.00 39.31 3.18
1359 1741 2.159627 CGTTACAGCAGGATGTTTCACC 59.840 50.000 0.00 0.00 39.31 4.02
1370 1752 7.630242 CAGGATGTTTCACCTGTATAATTGT 57.370 36.000 0.00 0.00 45.82 2.71
1371 1753 7.697691 CAGGATGTTTCACCTGTATAATTGTC 58.302 38.462 0.00 0.00 45.82 3.18
1372 1754 7.554118 CAGGATGTTTCACCTGTATAATTGTCT 59.446 37.037 0.00 0.00 45.82 3.41
1374 1756 9.561069 GGATGTTTCACCTGTATAATTGTCTAT 57.439 33.333 0.00 0.00 0.00 1.98
1378 1760 9.046296 GTTTCACCTGTATAATTGTCTATCAGG 57.954 37.037 0.00 0.00 44.23 3.86
1380 1762 8.183104 TCACCTGTATAATTGTCTATCAGGAG 57.817 38.462 13.98 7.23 42.16 3.69
1397 1779 2.996249 GAGAATCCTCTGACATGCCA 57.004 50.000 0.00 0.00 36.50 4.92
1398 1780 3.488778 GAGAATCCTCTGACATGCCAT 57.511 47.619 0.00 0.00 36.50 4.40
1399 1781 3.139850 GAGAATCCTCTGACATGCCATG 58.860 50.000 2.40 2.40 36.50 3.66
1400 1782 3.433314 GAGAATCCTCTGACATGCCATGT 60.433 47.826 10.74 10.74 40.22 3.21
1401 1783 3.053842 AGAATCCTCTGACATGCCATGTT 60.054 43.478 12.36 0.00 45.03 2.71
1402 1784 2.408271 TCCTCTGACATGCCATGTTC 57.592 50.000 12.36 6.10 45.03 3.18
1405 1787 2.093075 CCTCTGACATGCCATGTTCTCT 60.093 50.000 12.36 0.00 45.03 3.10
1408 1790 3.008266 TCTGACATGCCATGTTCTCTTCA 59.992 43.478 12.36 3.23 45.03 3.02
1409 1791 3.945921 CTGACATGCCATGTTCTCTTCAT 59.054 43.478 12.36 0.00 45.03 2.57
1410 1792 4.338012 TGACATGCCATGTTCTCTTCATT 58.662 39.130 12.36 0.00 45.03 2.57
1411 1793 5.499313 TGACATGCCATGTTCTCTTCATTA 58.501 37.500 12.36 0.00 45.03 1.90
1412 1794 6.124340 TGACATGCCATGTTCTCTTCATTAT 58.876 36.000 12.36 0.00 45.03 1.28
1415 1797 6.604396 ACATGCCATGTTCTCTTCATTATTGA 59.396 34.615 4.03 0.00 41.63 2.57
1416 1798 7.287005 ACATGCCATGTTCTCTTCATTATTGAT 59.713 33.333 4.03 0.00 41.63 2.57
1417 1799 7.034685 TGCCATGTTCTCTTCATTATTGATG 57.965 36.000 0.00 0.00 37.08 3.07
1418 1800 5.919141 GCCATGTTCTCTTCATTATTGATGC 59.081 40.000 0.00 0.00 35.64 3.91
1419 1801 6.460537 GCCATGTTCTCTTCATTATTGATGCA 60.461 38.462 0.00 0.00 35.64 3.96
1421 1803 8.789762 CCATGTTCTCTTCATTATTGATGCATA 58.210 33.333 0.00 0.00 35.64 3.14
1424 1806 9.563748 TGTTCTCTTCATTATTGATGCATATCA 57.436 29.630 0.00 0.00 41.44 2.15
1427 1809 9.216117 TCTCTTCATTATTGATGCATATCAGTG 57.784 33.333 0.00 0.00 43.76 3.66
1429 1811 9.563748 TCTTCATTATTGATGCATATCAGTGAA 57.436 29.630 0.00 6.01 43.76 3.18
1430 1812 9.608617 CTTCATTATTGATGCATATCAGTGAAC 57.391 33.333 0.00 0.00 43.76 3.18
1432 1814 8.780249 TCATTATTGATGCATATCAGTGAACAG 58.220 33.333 0.00 0.00 43.76 3.16
1436 1818 5.490159 TGATGCATATCAGTGAACAGTGAA 58.510 37.500 14.85 6.68 43.28 3.18
1437 1819 6.117488 TGATGCATATCAGTGAACAGTGAAT 58.883 36.000 14.85 5.27 43.28 2.57
1439 1821 4.877823 TGCATATCAGTGAACAGTGAATCC 59.122 41.667 14.85 6.32 43.28 3.01
1440 1822 4.274459 GCATATCAGTGAACAGTGAATCCC 59.726 45.833 14.85 3.29 43.28 3.85
1442 1824 3.855255 TCAGTGAACAGTGAATCCCAA 57.145 42.857 9.50 0.00 37.79 4.12
1443 1825 4.371624 TCAGTGAACAGTGAATCCCAAT 57.628 40.909 9.50 0.00 37.79 3.16
1444 1826 4.326826 TCAGTGAACAGTGAATCCCAATC 58.673 43.478 9.50 0.00 37.79 2.67
1445 1827 3.441572 CAGTGAACAGTGAATCCCAATCC 59.558 47.826 0.00 0.00 33.67 3.01
1447 1829 2.039746 TGAACAGTGAATCCCAATCCGT 59.960 45.455 0.00 0.00 0.00 4.69
1448 1830 2.879103 ACAGTGAATCCCAATCCGTT 57.121 45.000 0.00 0.00 0.00 4.44
1449 1831 3.154827 ACAGTGAATCCCAATCCGTTT 57.845 42.857 0.00 0.00 0.00 3.60
1450 1832 4.295141 ACAGTGAATCCCAATCCGTTTA 57.705 40.909 0.00 0.00 0.00 2.01
1451 1833 4.007659 ACAGTGAATCCCAATCCGTTTAC 58.992 43.478 0.00 0.00 0.00 2.01
1452 1834 4.261801 CAGTGAATCCCAATCCGTTTACT 58.738 43.478 0.00 0.00 0.00 2.24
1454 1836 5.523916 CAGTGAATCCCAATCCGTTTACTAG 59.476 44.000 0.00 0.00 0.00 2.57
1456 1838 6.099845 AGTGAATCCCAATCCGTTTACTAGAT 59.900 38.462 0.00 0.00 0.00 1.98
1464 1846 7.786178 CAATCCGTTTACTAGATTGGATTCA 57.214 36.000 12.93 0.00 42.64 2.57
1465 1847 7.855545 CAATCCGTTTACTAGATTGGATTCAG 58.144 38.462 12.93 4.50 42.64 3.02
1468 1850 7.210174 TCCGTTTACTAGATTGGATTCAGATG 58.790 38.462 0.00 0.00 0.00 2.90
1469 1851 6.986817 CCGTTTACTAGATTGGATTCAGATGT 59.013 38.462 0.00 0.00 0.00 3.06
1470 1852 8.141909 CCGTTTACTAGATTGGATTCAGATGTA 58.858 37.037 0.00 0.00 0.00 2.29
1471 1853 9.529325 CGTTTACTAGATTGGATTCAGATGTAA 57.471 33.333 0.00 0.00 0.00 2.41
1477 1859 9.868277 CTAGATTGGATTCAGATGTAATACTCC 57.132 37.037 0.00 0.00 0.00 3.85
1478 1860 7.684529 AGATTGGATTCAGATGTAATACTCCC 58.315 38.462 0.00 0.00 0.00 4.30
1479 1861 7.515514 AGATTGGATTCAGATGTAATACTCCCT 59.484 37.037 0.00 0.00 0.00 4.20
1480 1862 6.672266 TGGATTCAGATGTAATACTCCCTC 57.328 41.667 0.00 0.00 0.00 4.30
1483 1865 6.268847 GGATTCAGATGTAATACTCCCTCTGT 59.731 42.308 10.31 0.00 33.53 3.41
1484 1866 6.716934 TTCAGATGTAATACTCCCTCTGTC 57.283 41.667 10.31 0.00 33.53 3.51
1485 1867 5.141182 TCAGATGTAATACTCCCTCTGTCC 58.859 45.833 10.31 0.00 33.53 4.02
1486 1868 4.022762 CAGATGTAATACTCCCTCTGTCCG 60.023 50.000 0.00 0.00 0.00 4.79
1487 1869 2.662866 TGTAATACTCCCTCTGTCCGG 58.337 52.381 0.00 0.00 0.00 5.14
1489 1871 2.544844 AATACTCCCTCTGTCCGGAA 57.455 50.000 5.23 0.00 0.00 4.30
1492 1874 2.544844 ACTCCCTCTGTCCGGAAATA 57.455 50.000 5.23 0.00 0.00 1.40
1493 1875 2.108970 ACTCCCTCTGTCCGGAAATAC 58.891 52.381 5.23 0.00 0.00 1.89
1494 1876 2.292323 ACTCCCTCTGTCCGGAAATACT 60.292 50.000 5.23 0.00 0.00 2.12
1495 1877 2.362717 CTCCCTCTGTCCGGAAATACTC 59.637 54.545 5.23 0.00 0.00 2.59
1496 1878 1.067212 CCCTCTGTCCGGAAATACTCG 59.933 57.143 5.23 0.00 0.00 4.18
1497 1879 1.749634 CCTCTGTCCGGAAATACTCGT 59.250 52.381 5.23 0.00 0.00 4.18
1498 1880 2.223525 CCTCTGTCCGGAAATACTCGTC 60.224 54.545 5.23 0.00 0.00 4.20
1499 1881 2.422479 CTCTGTCCGGAAATACTCGTCA 59.578 50.000 5.23 0.00 0.00 4.35
1500 1882 3.021695 TCTGTCCGGAAATACTCGTCAT 58.978 45.455 5.23 0.00 0.00 3.06
1501 1883 3.446161 TCTGTCCGGAAATACTCGTCATT 59.554 43.478 5.23 0.00 0.00 2.57
1502 1884 3.517602 TGTCCGGAAATACTCGTCATTG 58.482 45.455 5.23 0.00 0.00 2.82
1503 1885 3.193903 TGTCCGGAAATACTCGTCATTGA 59.806 43.478 5.23 0.00 0.00 2.57
1504 1886 4.178540 GTCCGGAAATACTCGTCATTGAA 58.821 43.478 5.23 0.00 0.00 2.69
1505 1887 4.628333 GTCCGGAAATACTCGTCATTGAAA 59.372 41.667 5.23 0.00 0.00 2.69
1506 1888 5.293569 GTCCGGAAATACTCGTCATTGAAAT 59.706 40.000 5.23 0.00 0.00 2.17
1507 1889 5.293324 TCCGGAAATACTCGTCATTGAAATG 59.707 40.000 0.00 0.00 37.75 2.32
1508 1890 5.501715 CGGAAATACTCGTCATTGAAATGG 58.498 41.667 3.31 0.00 37.03 3.16
1509 1891 5.293324 CGGAAATACTCGTCATTGAAATGGA 59.707 40.000 3.31 0.00 37.03 3.41
1510 1892 6.017934 CGGAAATACTCGTCATTGAAATGGAT 60.018 38.462 3.31 0.00 37.03 3.41
1511 1893 7.134815 GGAAATACTCGTCATTGAAATGGATG 58.865 38.462 3.31 0.00 37.03 3.51
1512 1894 7.201732 GGAAATACTCGTCATTGAAATGGATGT 60.202 37.037 3.31 1.66 37.03 3.06
1513 1895 8.731275 AAATACTCGTCATTGAAATGGATGTA 57.269 30.769 3.31 3.46 37.03 2.29
1514 1896 8.908786 AATACTCGTCATTGAAATGGATGTAT 57.091 30.769 3.31 5.20 37.03 2.29
1515 1897 6.851222 ACTCGTCATTGAAATGGATGTATC 57.149 37.500 3.31 0.00 37.03 2.24
1516 1898 6.586344 ACTCGTCATTGAAATGGATGTATCT 58.414 36.000 3.31 0.00 37.03 1.98
1517 1899 7.726216 ACTCGTCATTGAAATGGATGTATCTA 58.274 34.615 3.31 0.00 37.03 1.98
1518 1900 7.869937 ACTCGTCATTGAAATGGATGTATCTAG 59.130 37.037 3.31 0.00 37.03 2.43
1519 1901 7.951591 TCGTCATTGAAATGGATGTATCTAGA 58.048 34.615 0.00 0.00 37.03 2.43
1520 1902 8.588472 TCGTCATTGAAATGGATGTATCTAGAT 58.412 33.333 10.73 10.73 37.03 1.98
1521 1903 8.654215 CGTCATTGAAATGGATGTATCTAGATG 58.346 37.037 15.79 0.00 37.03 2.90
1522 1904 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
1554 1936 8.717717 AGTTCTAGATACATCCATTTTCATCCA 58.282 33.333 0.00 0.00 0.00 3.41
1555 1937 9.512588 GTTCTAGATACATCCATTTTCATCCAT 57.487 33.333 0.00 0.00 0.00 3.41
1560 1942 9.204337 AGATACATCCATTTTCATCCATTTTGA 57.796 29.630 0.00 0.00 0.00 2.69
1561 1943 9.991906 GATACATCCATTTTCATCCATTTTGAT 57.008 29.630 0.00 0.00 0.00 2.57
1562 1944 9.772973 ATACATCCATTTTCATCCATTTTGATG 57.227 29.630 0.00 0.00 42.84 3.07
1574 1956 9.246670 TCATCCATTTTGATGACAAGTAATTCT 57.753 29.630 0.00 0.00 44.65 2.40
1575 1957 9.297586 CATCCATTTTGATGACAAGTAATTCTG 57.702 33.333 0.00 0.00 43.94 3.02
1576 1958 7.829725 TCCATTTTGATGACAAGTAATTCTGG 58.170 34.615 0.00 0.00 37.32 3.86
1577 1959 7.669304 TCCATTTTGATGACAAGTAATTCTGGA 59.331 33.333 0.00 0.00 37.32 3.86
1578 1960 7.756722 CCATTTTGATGACAAGTAATTCTGGAC 59.243 37.037 0.00 0.00 37.32 4.02
1579 1961 6.480524 TTTGATGACAAGTAATTCTGGACG 57.519 37.500 0.00 0.00 37.32 4.79
1580 1962 4.503910 TGATGACAAGTAATTCTGGACGG 58.496 43.478 0.00 0.00 0.00 4.79
1581 1963 4.221924 TGATGACAAGTAATTCTGGACGGA 59.778 41.667 0.00 0.00 0.00 4.69
1582 1964 4.188247 TGACAAGTAATTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
1583 1965 3.056107 TGACAAGTAATTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
1584 1966 2.236395 ACAAGTAATTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
1585 1967 2.500098 CAAGTAATTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
1586 1968 2.389715 AGTAATTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
1587 1969 2.108970 GTAATTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
1588 1970 2.544844 AATTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
1589 1971 2.777459 ATTCTGGACGGAGGGAGTAT 57.223 50.000 0.00 0.00 0.00 2.12
1603 2009 5.297029 GGAGGGAGTATCAATTAACAACAGC 59.703 44.000 0.00 0.00 36.25 4.40
1681 2087 5.437060 AGTTTTCTCTTGAAGTTACCAGCA 58.563 37.500 0.00 0.00 33.28 4.41
1686 2092 5.620206 TCTCTTGAAGTTACCAGCAAATCA 58.380 37.500 0.00 0.00 0.00 2.57
1703 2111 9.630098 CAGCAAATCACAATTCATTTACTTAGT 57.370 29.630 0.00 0.00 0.00 2.24
1867 2397 4.637091 AGTGGGATATAAACGGGAAAAACG 59.363 41.667 0.00 0.00 37.36 3.60
1883 2413 1.734388 AACGCAAACTGGGGCTGTTC 61.734 55.000 0.00 0.00 34.28 3.18
1885 2415 1.363807 GCAAACTGGGGCTGTTCAC 59.636 57.895 0.00 0.00 0.00 3.18
1944 2477 4.803426 GCAGCGTCTGTCCCTCCG 62.803 72.222 8.32 0.00 33.43 4.63
2148 2681 1.260561 CAGCGTGTCAACAAGGTACAC 59.739 52.381 0.64 0.00 40.05 2.90
2169 2703 4.511826 CACTCCTTGCTTCTAAGTTCGTTT 59.488 41.667 0.00 0.00 0.00 3.60
2181 2715 7.562454 TCTAAGTTCGTTTCAATCAGGTTTT 57.438 32.000 0.00 0.00 0.00 2.43
2186 2720 6.530181 AGTTCGTTTCAATCAGGTTTTGTTTC 59.470 34.615 0.00 0.00 0.00 2.78
2193 2727 4.766404 ATCAGGTTTTGTTTCATCCGAC 57.234 40.909 0.00 0.00 0.00 4.79
2204 2738 4.033932 TGTTTCATCCGACGATGCATTTAG 59.966 41.667 0.00 0.00 44.83 1.85
2258 2796 4.836175 TCATCTTAGTACTGGTGGTTGTCA 59.164 41.667 5.39 0.00 0.00 3.58
2321 2866 4.117685 GGCATGCTTTCAATCCTCATTTC 58.882 43.478 18.92 0.00 0.00 2.17
2322 2867 4.382254 GGCATGCTTTCAATCCTCATTTCA 60.382 41.667 18.92 0.00 0.00 2.69
2351 2896 7.281774 CAGTGTTTGGATGAGCATACTCTAATT 59.718 37.037 0.00 0.00 43.85 1.40
2354 2899 7.828717 TGTTTGGATGAGCATACTCTAATTTCA 59.171 33.333 0.00 0.00 43.85 2.69
2626 3174 0.666274 CGCAGTCGAGTGCACCTTTA 60.666 55.000 36.78 0.00 44.21 1.85
3047 3680 9.350357 GATGTAGTGAACTAAGTTAATCGTGAA 57.650 33.333 0.00 0.00 0.00 3.18
3466 4163 2.698797 AGGAGTGTCCTTCACGAGAAAA 59.301 45.455 0.00 0.00 46.91 2.29
3503 4200 0.963962 CCATGTTGCCTGTTCAAGCT 59.036 50.000 0.00 0.00 0.00 3.74
3580 4278 3.978193 AAGACCCCATGCCGCCAA 61.978 61.111 0.00 0.00 0.00 4.52
3722 4484 9.536510 TTACCTAGGCCATTTGTTTATTTTACT 57.463 29.630 9.30 0.00 0.00 2.24
3938 4917 1.798735 CACCAAGAGGCATGCTTCG 59.201 57.895 22.44 12.13 39.06 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.600636 CCAGGAAGAAGGTTGCGCA 60.601 57.895 5.66 5.66 0.00 6.09
2 3 1.675641 CCCCAGGAAGAAGGTTGCG 60.676 63.158 0.00 0.00 0.00 4.85
5 6 1.068352 AGTGCCCCAGGAAGAAGGTT 61.068 55.000 0.00 0.00 0.00 3.50
6 7 1.068352 AAGTGCCCCAGGAAGAAGGT 61.068 55.000 0.00 0.00 0.00 3.50
7 8 0.322906 GAAGTGCCCCAGGAAGAAGG 60.323 60.000 0.00 0.00 0.00 3.46
10 11 0.118346 TAGGAAGTGCCCCAGGAAGA 59.882 55.000 0.00 0.00 37.37 2.87
11 12 0.543749 CTAGGAAGTGCCCCAGGAAG 59.456 60.000 0.00 0.00 37.37 3.46
12 13 0.178873 ACTAGGAAGTGCCCCAGGAA 60.179 55.000 0.00 0.00 37.37 3.36
13 14 0.714180 TACTAGGAAGTGCCCCAGGA 59.286 55.000 0.00 0.00 36.36 3.86
14 15 1.123928 CTACTAGGAAGTGCCCCAGG 58.876 60.000 0.00 0.00 36.36 4.45
15 16 1.757699 GTCTACTAGGAAGTGCCCCAG 59.242 57.143 0.00 0.00 36.36 4.45
16 17 1.861982 GTCTACTAGGAAGTGCCCCA 58.138 55.000 0.00 0.00 36.36 4.96
17 18 0.745468 CGTCTACTAGGAAGTGCCCC 59.255 60.000 0.00 0.00 36.36 5.80
18 19 1.677052 CTCGTCTACTAGGAAGTGCCC 59.323 57.143 0.00 0.00 36.36 5.36
19 20 1.065851 GCTCGTCTACTAGGAAGTGCC 59.934 57.143 0.00 0.00 36.36 5.01
20 21 1.065851 GGCTCGTCTACTAGGAAGTGC 59.934 57.143 0.00 0.00 36.36 4.40
21 22 2.356382 CTGGCTCGTCTACTAGGAAGTG 59.644 54.545 0.00 0.00 36.36 3.16
22 23 2.645802 CTGGCTCGTCTACTAGGAAGT 58.354 52.381 0.00 0.00 39.91 3.01
23 24 1.335496 GCTGGCTCGTCTACTAGGAAG 59.665 57.143 0.00 0.00 0.00 3.46
24 25 1.064611 AGCTGGCTCGTCTACTAGGAA 60.065 52.381 0.00 0.00 0.00 3.36
25 26 0.547075 AGCTGGCTCGTCTACTAGGA 59.453 55.000 0.00 0.00 0.00 2.94
26 27 0.665835 CAGCTGGCTCGTCTACTAGG 59.334 60.000 5.57 0.00 0.00 3.02
27 28 1.601903 CTCAGCTGGCTCGTCTACTAG 59.398 57.143 15.13 0.00 0.00 2.57
28 29 1.669604 CTCAGCTGGCTCGTCTACTA 58.330 55.000 15.13 0.00 0.00 1.82
29 30 1.034838 CCTCAGCTGGCTCGTCTACT 61.035 60.000 15.13 0.00 0.00 2.57
30 31 1.435515 CCTCAGCTGGCTCGTCTAC 59.564 63.158 15.13 0.00 0.00 2.59
31 32 3.926003 CCTCAGCTGGCTCGTCTA 58.074 61.111 15.13 0.00 0.00 2.59
42 43 3.575351 CTATACCGGCCGCCTCAGC 62.575 68.421 22.85 0.00 0.00 4.26
43 44 2.201022 ACTATACCGGCCGCCTCAG 61.201 63.158 22.85 16.09 0.00 3.35
44 45 2.123597 ACTATACCGGCCGCCTCA 60.124 61.111 22.85 3.85 0.00 3.86
45 46 1.533469 ATCACTATACCGGCCGCCTC 61.533 60.000 22.85 0.00 0.00 4.70
46 47 1.533273 ATCACTATACCGGCCGCCT 60.533 57.895 22.85 9.50 0.00 5.52
47 48 1.374252 CATCACTATACCGGCCGCC 60.374 63.158 22.85 0.00 0.00 6.13
48 49 1.374252 CCATCACTATACCGGCCGC 60.374 63.158 22.85 0.00 0.00 6.53
49 50 0.243907 CTCCATCACTATACCGGCCG 59.756 60.000 21.04 21.04 0.00 6.13
50 51 0.037232 GCTCCATCACTATACCGGCC 60.037 60.000 0.00 0.00 0.00 6.13
51 52 0.388649 CGCTCCATCACTATACCGGC 60.389 60.000 0.00 0.00 0.00 6.13
52 53 0.243907 CCGCTCCATCACTATACCGG 59.756 60.000 0.00 0.00 0.00 5.28
53 54 0.388649 GCCGCTCCATCACTATACCG 60.389 60.000 0.00 0.00 0.00 4.02
54 55 0.037232 GGCCGCTCCATCACTATACC 60.037 60.000 0.00 0.00 34.01 2.73
55 56 0.679505 TGGCCGCTCCATCACTATAC 59.320 55.000 0.00 0.00 40.72 1.47
56 57 3.141409 TGGCCGCTCCATCACTATA 57.859 52.632 0.00 0.00 40.72 1.31
57 58 3.970332 TGGCCGCTCCATCACTAT 58.030 55.556 0.00 0.00 40.72 2.12
65 66 3.746949 CTCTCACCATGGCCGCTCC 62.747 68.421 13.04 0.00 0.00 4.70
66 67 2.202987 CTCTCACCATGGCCGCTC 60.203 66.667 13.04 0.00 0.00 5.03
67 68 2.685017 TCTCTCACCATGGCCGCT 60.685 61.111 13.04 0.00 0.00 5.52
68 69 2.202987 CTCTCTCACCATGGCCGC 60.203 66.667 13.04 0.00 0.00 6.53
69 70 1.039785 TCTCTCTCTCACCATGGCCG 61.040 60.000 13.04 3.06 0.00 6.13
70 71 1.134551 GTTCTCTCTCTCACCATGGCC 60.135 57.143 13.04 0.00 0.00 5.36
71 72 1.470632 CGTTCTCTCTCTCACCATGGC 60.471 57.143 13.04 0.00 0.00 4.40
72 73 2.095461 TCGTTCTCTCTCTCACCATGG 58.905 52.381 11.19 11.19 0.00 3.66
73 74 3.013219 TCTCGTTCTCTCTCTCACCATG 58.987 50.000 0.00 0.00 0.00 3.66
74 75 3.054728 TCTCTCGTTCTCTCTCTCACCAT 60.055 47.826 0.00 0.00 0.00 3.55
75 76 2.303311 TCTCTCGTTCTCTCTCTCACCA 59.697 50.000 0.00 0.00 0.00 4.17
76 77 2.936498 CTCTCTCGTTCTCTCTCTCACC 59.064 54.545 0.00 0.00 0.00 4.02
77 78 3.857052 TCTCTCTCGTTCTCTCTCTCAC 58.143 50.000 0.00 0.00 0.00 3.51
78 79 3.678806 GCTCTCTCTCGTTCTCTCTCTCA 60.679 52.174 0.00 0.00 0.00 3.27
79 80 2.866762 GCTCTCTCTCGTTCTCTCTCTC 59.133 54.545 0.00 0.00 0.00 3.20
80 81 2.738643 CGCTCTCTCTCGTTCTCTCTCT 60.739 54.545 0.00 0.00 0.00 3.10
81 82 1.593006 CGCTCTCTCTCGTTCTCTCTC 59.407 57.143 0.00 0.00 0.00 3.20
82 83 1.206132 TCGCTCTCTCTCGTTCTCTCT 59.794 52.381 0.00 0.00 0.00 3.10
83 84 1.593006 CTCGCTCTCTCTCGTTCTCTC 59.407 57.143 0.00 0.00 0.00 3.20
84 85 1.206132 TCTCGCTCTCTCTCGTTCTCT 59.794 52.381 0.00 0.00 0.00 3.10
85 86 1.593006 CTCTCGCTCTCTCTCGTTCTC 59.407 57.143 0.00 0.00 0.00 2.87
86 87 1.206132 TCTCTCGCTCTCTCTCGTTCT 59.794 52.381 0.00 0.00 0.00 3.01
87 88 1.593006 CTCTCTCGCTCTCTCTCGTTC 59.407 57.143 0.00 0.00 0.00 3.95
88 89 1.651987 CTCTCTCGCTCTCTCTCGTT 58.348 55.000 0.00 0.00 0.00 3.85
89 90 0.810031 GCTCTCTCGCTCTCTCTCGT 60.810 60.000 0.00 0.00 0.00 4.18
90 91 1.821241 CGCTCTCTCGCTCTCTCTCG 61.821 65.000 0.00 0.00 0.00 4.04
91 92 0.529773 TCGCTCTCTCGCTCTCTCTC 60.530 60.000 0.00 0.00 0.00 3.20
92 93 0.530650 CTCGCTCTCTCGCTCTCTCT 60.531 60.000 0.00 0.00 0.00 3.10
93 94 0.529773 TCTCGCTCTCTCGCTCTCTC 60.530 60.000 0.00 0.00 0.00 3.20
94 95 0.530650 CTCTCGCTCTCTCGCTCTCT 60.531 60.000 0.00 0.00 0.00 3.10
95 96 0.529773 TCTCTCGCTCTCTCGCTCTC 60.530 60.000 0.00 0.00 0.00 3.20
96 97 0.530650 CTCTCTCGCTCTCTCGCTCT 60.531 60.000 0.00 0.00 0.00 4.09
97 98 0.529773 TCTCTCTCGCTCTCTCGCTC 60.530 60.000 0.00 0.00 0.00 5.03
98 99 0.530650 CTCTCTCTCGCTCTCTCGCT 60.531 60.000 0.00 0.00 0.00 4.93
99 100 1.498865 CCTCTCTCTCGCTCTCTCGC 61.499 65.000 0.00 0.00 0.00 5.03
100 101 0.104120 TCCTCTCTCTCGCTCTCTCG 59.896 60.000 0.00 0.00 0.00 4.04
101 102 1.134521 TGTCCTCTCTCTCGCTCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
102 103 0.908910 TGTCCTCTCTCTCGCTCTCT 59.091 55.000 0.00 0.00 0.00 3.10
103 104 1.014352 GTGTCCTCTCTCTCGCTCTC 58.986 60.000 0.00 0.00 0.00 3.20
104 105 0.742990 CGTGTCCTCTCTCTCGCTCT 60.743 60.000 0.00 0.00 0.00 4.09
105 106 1.711060 CCGTGTCCTCTCTCTCGCTC 61.711 65.000 0.00 0.00 0.00 5.03
106 107 1.747367 CCGTGTCCTCTCTCTCGCT 60.747 63.158 0.00 0.00 0.00 4.93
107 108 1.711060 CTCCGTGTCCTCTCTCTCGC 61.711 65.000 0.00 0.00 0.00 5.03
108 109 0.108089 TCTCCGTGTCCTCTCTCTCG 60.108 60.000 0.00 0.00 0.00 4.04
109 110 1.208535 TCTCTCCGTGTCCTCTCTCTC 59.791 57.143 0.00 0.00 0.00 3.20
110 111 1.209504 CTCTCTCCGTGTCCTCTCTCT 59.790 57.143 0.00 0.00 0.00 3.10
111 112 1.208535 TCTCTCTCCGTGTCCTCTCTC 59.791 57.143 0.00 0.00 0.00 3.20
112 113 1.209504 CTCTCTCTCCGTGTCCTCTCT 59.790 57.143 0.00 0.00 0.00 3.10
113 114 1.208535 TCTCTCTCTCCGTGTCCTCTC 59.791 57.143 0.00 0.00 0.00 3.20
114 115 1.209504 CTCTCTCTCTCCGTGTCCTCT 59.790 57.143 0.00 0.00 0.00 3.69
115 116 1.208535 TCTCTCTCTCTCCGTGTCCTC 59.791 57.143 0.00 0.00 0.00 3.71
116 117 1.209504 CTCTCTCTCTCTCCGTGTCCT 59.790 57.143 0.00 0.00 0.00 3.85
117 118 1.208535 TCTCTCTCTCTCTCCGTGTCC 59.791 57.143 0.00 0.00 0.00 4.02
118 119 2.167693 TCTCTCTCTCTCTCTCCGTGTC 59.832 54.545 0.00 0.00 0.00 3.67
119 120 2.168521 CTCTCTCTCTCTCTCTCCGTGT 59.831 54.545 0.00 0.00 0.00 4.49
120 121 2.826428 CTCTCTCTCTCTCTCTCCGTG 58.174 57.143 0.00 0.00 0.00 4.94
121 122 1.139058 GCTCTCTCTCTCTCTCTCCGT 59.861 57.143 0.00 0.00 0.00 4.69
122 123 1.869754 CGCTCTCTCTCTCTCTCTCCG 60.870 61.905 0.00 0.00 0.00 4.63
123 124 1.412710 TCGCTCTCTCTCTCTCTCTCC 59.587 57.143 0.00 0.00 0.00 3.71
124 125 2.362397 TCTCGCTCTCTCTCTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
125 126 2.363680 CTCTCGCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
126 127 2.748605 CTCTCGCTCTCTCTCTCTCTC 58.251 57.143 0.00 0.00 0.00 3.20
127 128 1.202580 GCTCTCGCTCTCTCTCTCTCT 60.203 57.143 0.00 0.00 0.00 3.10
128 129 1.221414 GCTCTCGCTCTCTCTCTCTC 58.779 60.000 0.00 0.00 0.00 3.20
129 130 0.530650 CGCTCTCGCTCTCTCTCTCT 60.531 60.000 0.00 0.00 0.00 3.10
130 131 0.529773 TCGCTCTCGCTCTCTCTCTC 60.530 60.000 0.00 0.00 35.26 3.20
131 132 0.530650 CTCGCTCTCGCTCTCTCTCT 60.531 60.000 0.00 0.00 35.26 3.10
132 133 0.810031 ACTCGCTCTCGCTCTCTCTC 60.810 60.000 0.00 0.00 35.26 3.20
133 134 1.089481 CACTCGCTCTCGCTCTCTCT 61.089 60.000 0.00 0.00 35.26 3.10
134 135 1.087202 TCACTCGCTCTCGCTCTCTC 61.087 60.000 0.00 0.00 35.26 3.20
135 136 1.078778 TCACTCGCTCTCGCTCTCT 60.079 57.895 0.00 0.00 35.26 3.10
136 137 1.087202 TCTCACTCGCTCTCGCTCTC 61.087 60.000 0.00 0.00 35.26 3.20
137 138 1.078778 TCTCACTCGCTCTCGCTCT 60.079 57.895 0.00 0.00 35.26 4.09
138 139 1.087202 TCTCTCACTCGCTCTCGCTC 61.087 60.000 0.00 0.00 35.26 5.03
139 140 1.078778 TCTCTCACTCGCTCTCGCT 60.079 57.895 0.00 0.00 35.26 4.93
140 141 1.087202 TCTCTCTCACTCGCTCTCGC 61.087 60.000 0.00 0.00 35.26 5.03
141 142 0.930310 CTCTCTCTCACTCGCTCTCG 59.070 60.000 0.00 0.00 0.00 4.04
142 143 1.134521 TCCTCTCTCTCACTCGCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
143 144 0.908910 TCCTCTCTCTCACTCGCTCT 59.091 55.000 0.00 0.00 0.00 4.09
144 145 1.014352 GTCCTCTCTCTCACTCGCTC 58.986 60.000 0.00 0.00 0.00 5.03
145 146 0.326595 TGTCCTCTCTCTCACTCGCT 59.673 55.000 0.00 0.00 0.00 4.93
146 147 0.450184 GTGTCCTCTCTCTCACTCGC 59.550 60.000 0.00 0.00 0.00 5.03
147 148 1.737236 CTGTGTCCTCTCTCTCACTCG 59.263 57.143 0.00 0.00 0.00 4.18
148 149 3.009723 CTCTGTGTCCTCTCTCTCACTC 58.990 54.545 0.00 0.00 0.00 3.51
149 150 2.642311 TCTCTGTGTCCTCTCTCTCACT 59.358 50.000 0.00 0.00 0.00 3.41
150 151 3.009723 CTCTCTGTGTCCTCTCTCTCAC 58.990 54.545 0.00 0.00 0.00 3.51
151 152 2.909662 TCTCTCTGTGTCCTCTCTCTCA 59.090 50.000 0.00 0.00 0.00 3.27
152 153 3.197766 TCTCTCTCTGTGTCCTCTCTCTC 59.802 52.174 0.00 0.00 0.00 3.20
153 154 3.181329 TCTCTCTCTGTGTCCTCTCTCT 58.819 50.000 0.00 0.00 0.00 3.10
154 155 3.197766 TCTCTCTCTCTGTGTCCTCTCTC 59.802 52.174 0.00 0.00 0.00 3.20
155 156 3.181329 TCTCTCTCTCTGTGTCCTCTCT 58.819 50.000 0.00 0.00 0.00 3.10
156 157 3.197766 TCTCTCTCTCTCTGTGTCCTCTC 59.802 52.174 0.00 0.00 0.00 3.20
157 158 3.181329 TCTCTCTCTCTCTGTGTCCTCT 58.819 50.000 0.00 0.00 0.00 3.69
158 159 3.197766 TCTCTCTCTCTCTCTGTGTCCTC 59.802 52.174 0.00 0.00 0.00 3.71
159 160 3.055094 GTCTCTCTCTCTCTCTGTGTCCT 60.055 52.174 0.00 0.00 0.00 3.85
160 161 3.270877 GTCTCTCTCTCTCTCTGTGTCC 58.729 54.545 0.00 0.00 0.00 4.02
161 162 3.055094 AGGTCTCTCTCTCTCTCTGTGTC 60.055 52.174 0.00 0.00 0.00 3.67
162 163 2.912956 AGGTCTCTCTCTCTCTCTGTGT 59.087 50.000 0.00 0.00 0.00 3.72
163 164 3.634397 AGGTCTCTCTCTCTCTCTGTG 57.366 52.381 0.00 0.00 0.00 3.66
164 165 3.711704 CCTAGGTCTCTCTCTCTCTCTGT 59.288 52.174 0.00 0.00 0.00 3.41
165 166 3.071602 CCCTAGGTCTCTCTCTCTCTCTG 59.928 56.522 8.29 0.00 0.00 3.35
206 208 4.220602 ACAATGTGGCCCTTGTAGAATTTC 59.779 41.667 12.32 0.00 33.96 2.17
207 209 4.159557 ACAATGTGGCCCTTGTAGAATTT 58.840 39.130 12.32 0.00 33.96 1.82
211 213 5.702065 TTATACAATGTGGCCCTTGTAGA 57.298 39.130 20.57 16.13 40.19 2.59
223 226 6.315891 GCAACAATTGGGCATTTATACAATGT 59.684 34.615 16.59 0.00 34.12 2.71
229 232 3.449018 ACGGCAACAATTGGGCATTTATA 59.551 39.130 21.14 0.00 0.00 0.98
243 246 2.668632 GGAGATCCCACGGCAACA 59.331 61.111 0.00 0.00 34.14 3.33
261 264 1.079127 CGACTGTAAGGCCCAGGTG 60.079 63.158 11.60 0.75 40.92 4.00
262 265 2.291043 CCGACTGTAAGGCCCAGGT 61.291 63.158 11.60 0.00 40.92 4.00
271 277 2.048597 CAGCCACGCCGACTGTAA 60.049 61.111 0.00 0.00 0.00 2.41
289 295 1.626654 CTAGCGTGGCACTTTGACCG 61.627 60.000 16.72 1.15 0.00 4.79
307 313 9.152327 TCTAATTATCTCTCATCACCATTGACT 57.848 33.333 0.00 0.00 33.38 3.41
314 320 9.859427 CTCAGATTCTAATTATCTCTCATCACC 57.141 37.037 0.00 0.00 30.05 4.02
326 336 7.825331 AGTCGTCCATCTCAGATTCTAATTA 57.175 36.000 0.00 0.00 0.00 1.40
359 369 7.830940 TGAAAATGCACATTTGGATCATAAC 57.169 32.000 9.26 0.00 40.57 1.89
363 373 6.289834 ACTTTGAAAATGCACATTTGGATCA 58.710 32.000 9.26 7.04 40.57 2.92
366 376 8.557864 CAAATACTTTGAAAATGCACATTTGGA 58.442 29.630 9.26 0.00 43.26 3.53
370 380 7.173047 GGTCCAAATACTTTGAAAATGCACATT 59.827 33.333 0.00 0.00 43.26 2.71
372 382 5.988561 GGTCCAAATACTTTGAAAATGCACA 59.011 36.000 0.00 0.00 43.26 4.57
373 383 5.408299 GGGTCCAAATACTTTGAAAATGCAC 59.592 40.000 0.00 0.00 43.26 4.57
391 401 3.329225 TCACATAATTGTCACTGGGTCCA 59.671 43.478 0.00 0.00 32.34 4.02
396 406 9.726232 CTAATTCATTCACATAATTGTCACTGG 57.274 33.333 0.00 0.00 32.34 4.00
402 413 7.468631 GCGGTCCTAATTCATTCACATAATTGT 60.469 37.037 0.00 0.00 36.15 2.71
408 419 4.156455 AGCGGTCCTAATTCATTCACAT 57.844 40.909 0.00 0.00 0.00 3.21
409 420 3.627395 AGCGGTCCTAATTCATTCACA 57.373 42.857 0.00 0.00 0.00 3.58
410 421 4.083802 GCATAGCGGTCCTAATTCATTCAC 60.084 45.833 0.00 0.00 0.00 3.18
411 422 4.065088 GCATAGCGGTCCTAATTCATTCA 58.935 43.478 0.00 0.00 0.00 2.57
415 426 3.769739 ATGCATAGCGGTCCTAATTCA 57.230 42.857 0.00 0.00 0.00 2.57
454 466 7.977853 AGTTAACTTAAAGAGTGTGTCTCGAAA 59.022 33.333 1.12 0.00 46.86 3.46
456 468 7.035840 AGTTAACTTAAAGAGTGTGTCTCGA 57.964 36.000 1.12 0.00 46.86 4.04
457 469 7.695869 AAGTTAACTTAAAGAGTGTGTCTCG 57.304 36.000 19.26 0.00 40.08 4.04
515 560 2.039348 ACTTAAAGCGCTACCCCTCAAA 59.961 45.455 12.05 0.00 0.00 2.69
516 561 1.626825 ACTTAAAGCGCTACCCCTCAA 59.373 47.619 12.05 0.00 0.00 3.02
517 562 1.272807 ACTTAAAGCGCTACCCCTCA 58.727 50.000 12.05 0.00 0.00 3.86
518 563 2.398252 AACTTAAAGCGCTACCCCTC 57.602 50.000 12.05 0.00 0.00 4.30
519 564 3.262660 ACTTAACTTAAAGCGCTACCCCT 59.737 43.478 12.05 0.00 0.00 4.79
819 1106 6.262944 CCAAGGCAAAGCAACATCTATATACA 59.737 38.462 0.00 0.00 0.00 2.29
825 1112 1.545582 GCCAAGGCAAAGCAACATCTA 59.454 47.619 6.14 0.00 41.49 1.98
848 1141 1.278238 GTGACTTATCAACGAGCCCG 58.722 55.000 0.00 0.00 36.31 6.13
849 1142 1.653151 GGTGACTTATCAACGAGCCC 58.347 55.000 0.00 0.00 36.31 5.19
856 1149 1.668826 AGGCCCAGGTGACTTATCAA 58.331 50.000 0.00 0.00 40.21 2.57
892 1200 5.946298 TCTTTGTTGATTCTTATGCTGCTG 58.054 37.500 0.00 0.00 0.00 4.41
937 1245 3.670627 GCAAATCGAGCAAACCCTAACAG 60.671 47.826 0.00 0.00 0.00 3.16
1022 1339 0.762461 CTCCACCTCCTCCTCATCCC 60.762 65.000 0.00 0.00 0.00 3.85
1068 1397 1.228063 CCAGGCATCCCAATCCTCG 60.228 63.158 0.00 0.00 0.00 4.63
1275 1604 3.982516 AGATAGAGGCCACTTACACTCA 58.017 45.455 8.39 0.00 32.52 3.41
1309 1638 3.384168 ACTCCCATACATAACAGCCAGA 58.616 45.455 0.00 0.00 0.00 3.86
1310 1639 3.845781 ACTCCCATACATAACAGCCAG 57.154 47.619 0.00 0.00 0.00 4.85
1314 1643 7.494625 ACGTAATTCAACTCCCATACATAACAG 59.505 37.037 0.00 0.00 0.00 3.16
1318 1700 8.476447 TGTAACGTAATTCAACTCCCATACATA 58.524 33.333 0.00 0.00 0.00 2.29
1323 1705 4.634443 GCTGTAACGTAATTCAACTCCCAT 59.366 41.667 0.00 0.00 0.00 4.00
1329 1711 5.121768 ACATCCTGCTGTAACGTAATTCAAC 59.878 40.000 0.00 0.00 0.00 3.18
1330 1712 5.242434 ACATCCTGCTGTAACGTAATTCAA 58.758 37.500 0.00 0.00 0.00 2.69
1340 1722 3.411446 CAGGTGAAACATCCTGCTGTAA 58.589 45.455 0.00 0.00 43.45 2.41
1342 1724 1.901591 CAGGTGAAACATCCTGCTGT 58.098 50.000 0.00 0.00 43.45 4.40
1347 1729 7.633789 AGACAATTATACAGGTGAAACATCCT 58.366 34.615 0.00 0.00 39.98 3.24
1348 1730 7.865706 AGACAATTATACAGGTGAAACATCC 57.134 36.000 0.00 0.00 39.98 3.51
1351 1733 9.599866 CTGATAGACAATTATACAGGTGAAACA 57.400 33.333 0.00 0.00 39.98 2.83
1352 1734 9.046296 CCTGATAGACAATTATACAGGTGAAAC 57.954 37.037 0.00 0.00 38.67 2.78
1353 1735 8.988060 TCCTGATAGACAATTATACAGGTGAAA 58.012 33.333 0.00 0.00 42.44 2.69
1356 1738 8.183104 TCTCCTGATAGACAATTATACAGGTG 57.817 38.462 0.00 0.00 42.44 4.00
1357 1739 8.783660 TTCTCCTGATAGACAATTATACAGGT 57.216 34.615 0.00 0.00 42.44 4.00
1358 1740 9.868277 GATTCTCCTGATAGACAATTATACAGG 57.132 37.037 0.00 0.00 42.97 4.00
1359 1741 9.868277 GGATTCTCCTGATAGACAATTATACAG 57.132 37.037 0.00 0.00 32.53 2.74
1378 1760 2.996249 TGGCATGTCAGAGGATTCTC 57.004 50.000 0.00 0.00 40.25 2.87
1380 1762 2.928334 ACATGGCATGTCAGAGGATTC 58.072 47.619 26.78 0.00 39.92 2.52
1390 1772 6.604396 TCAATAATGAAGAGAACATGGCATGT 59.396 34.615 26.78 26.78 37.64 3.21
1391 1773 7.034685 TCAATAATGAAGAGAACATGGCATG 57.965 36.000 25.31 25.31 30.99 4.06
1392 1774 7.658261 CATCAATAATGAAGAGAACATGGCAT 58.342 34.615 0.00 0.00 39.49 4.40
1393 1775 6.460537 GCATCAATAATGAAGAGAACATGGCA 60.461 38.462 0.00 0.00 39.49 4.92
1394 1776 5.919141 GCATCAATAATGAAGAGAACATGGC 59.081 40.000 0.00 0.00 39.49 4.40
1398 1780 9.563748 TGATATGCATCAATAATGAAGAGAACA 57.436 29.630 0.19 0.00 38.25 3.18
1400 1782 9.788889 ACTGATATGCATCAATAATGAAGAGAA 57.211 29.630 0.19 0.00 40.66 2.87
1401 1783 9.216117 CACTGATATGCATCAATAATGAAGAGA 57.784 33.333 0.19 0.00 40.66 3.10
1402 1784 9.216117 TCACTGATATGCATCAATAATGAAGAG 57.784 33.333 0.19 0.00 40.66 2.85
1405 1787 9.122779 TGTTCACTGATATGCATCAATAATGAA 57.877 29.630 0.19 5.33 40.66 2.57
1408 1790 8.565416 CACTGTTCACTGATATGCATCAATAAT 58.435 33.333 0.19 0.00 40.66 1.28
1409 1791 7.769970 TCACTGTTCACTGATATGCATCAATAA 59.230 33.333 0.19 0.00 40.66 1.40
1410 1792 7.274447 TCACTGTTCACTGATATGCATCAATA 58.726 34.615 0.19 0.00 40.66 1.90
1411 1793 6.117488 TCACTGTTCACTGATATGCATCAAT 58.883 36.000 0.19 0.00 40.66 2.57
1412 1794 5.490159 TCACTGTTCACTGATATGCATCAA 58.510 37.500 0.19 0.00 40.66 2.57
1415 1797 5.530171 GGATTCACTGTTCACTGATATGCAT 59.470 40.000 3.79 3.79 0.00 3.96
1416 1798 4.877823 GGATTCACTGTTCACTGATATGCA 59.122 41.667 0.00 0.00 0.00 3.96
1417 1799 4.274459 GGGATTCACTGTTCACTGATATGC 59.726 45.833 0.00 0.00 0.00 3.14
1418 1800 5.430886 TGGGATTCACTGTTCACTGATATG 58.569 41.667 0.00 0.00 0.00 1.78
1419 1801 5.698741 TGGGATTCACTGTTCACTGATAT 57.301 39.130 0.00 0.00 0.00 1.63
1421 1803 4.371624 TTGGGATTCACTGTTCACTGAT 57.628 40.909 0.00 0.00 0.00 2.90
1422 1804 3.855255 TTGGGATTCACTGTTCACTGA 57.145 42.857 0.00 0.00 0.00 3.41
1423 1805 3.441572 GGATTGGGATTCACTGTTCACTG 59.558 47.826 0.00 0.00 0.00 3.66
1424 1806 3.690460 GGATTGGGATTCACTGTTCACT 58.310 45.455 0.00 0.00 0.00 3.41
1425 1807 2.420022 CGGATTGGGATTCACTGTTCAC 59.580 50.000 0.00 0.00 0.00 3.18
1427 1809 2.711542 ACGGATTGGGATTCACTGTTC 58.288 47.619 0.00 0.00 0.00 3.18
1429 1811 2.879103 AACGGATTGGGATTCACTGT 57.121 45.000 0.00 0.00 0.00 3.55
1430 1812 4.261801 AGTAAACGGATTGGGATTCACTG 58.738 43.478 0.00 0.00 0.00 3.66
1432 1814 5.667466 TCTAGTAAACGGATTGGGATTCAC 58.333 41.667 0.00 0.00 0.00 3.18
1440 1822 7.710907 TCTGAATCCAATCTAGTAAACGGATTG 59.289 37.037 17.11 17.11 41.98 2.67
1442 1824 7.361457 TCTGAATCCAATCTAGTAAACGGAT 57.639 36.000 0.00 0.00 34.74 4.18
1443 1825 6.785337 TCTGAATCCAATCTAGTAAACGGA 57.215 37.500 0.00 0.00 0.00 4.69
1444 1826 6.986817 ACATCTGAATCCAATCTAGTAAACGG 59.013 38.462 0.00 0.00 0.00 4.44
1445 1827 9.529325 TTACATCTGAATCCAATCTAGTAAACG 57.471 33.333 0.00 0.00 0.00 3.60
1451 1833 9.868277 GGAGTATTACATCTGAATCCAATCTAG 57.132 37.037 0.00 0.00 0.00 2.43
1452 1834 8.816894 GGGAGTATTACATCTGAATCCAATCTA 58.183 37.037 0.00 0.00 0.00 1.98
1454 1836 7.684529 AGGGAGTATTACATCTGAATCCAATC 58.315 38.462 0.00 0.00 0.00 2.67
1456 1838 6.846505 AGAGGGAGTATTACATCTGAATCCAA 59.153 38.462 0.00 0.00 0.00 3.53
1459 1841 7.296628 ACAGAGGGAGTATTACATCTGAATC 57.703 40.000 17.89 0.00 38.02 2.52
1462 1844 5.141182 GGACAGAGGGAGTATTACATCTGA 58.859 45.833 17.89 0.00 38.02 3.27
1464 1846 4.145807 CGGACAGAGGGAGTATTACATCT 58.854 47.826 0.00 0.00 0.00 2.90
1465 1847 3.256136 CCGGACAGAGGGAGTATTACATC 59.744 52.174 0.00 0.00 0.00 3.06
1468 1850 2.941480 TCCGGACAGAGGGAGTATTAC 58.059 52.381 0.00 0.00 0.00 1.89
1469 1851 3.675348 TTCCGGACAGAGGGAGTATTA 57.325 47.619 1.83 0.00 33.01 0.98
1470 1852 2.544844 TTCCGGACAGAGGGAGTATT 57.455 50.000 1.83 0.00 33.01 1.89
1471 1853 2.544844 TTTCCGGACAGAGGGAGTAT 57.455 50.000 1.83 0.00 33.01 2.12
1473 1855 2.108970 GTATTTCCGGACAGAGGGAGT 58.891 52.381 1.83 0.00 33.01 3.85
1474 1856 2.362717 GAGTATTTCCGGACAGAGGGAG 59.637 54.545 1.83 0.00 33.01 4.30
1475 1857 2.385803 GAGTATTTCCGGACAGAGGGA 58.614 52.381 1.83 0.00 0.00 4.20
1476 1858 1.067212 CGAGTATTTCCGGACAGAGGG 59.933 57.143 1.83 0.00 0.00 4.30
1477 1859 1.749634 ACGAGTATTTCCGGACAGAGG 59.250 52.381 1.83 0.00 0.00 3.69
1478 1860 2.422479 TGACGAGTATTTCCGGACAGAG 59.578 50.000 1.83 0.00 0.00 3.35
1479 1861 2.439409 TGACGAGTATTTCCGGACAGA 58.561 47.619 1.83 0.00 0.00 3.41
1480 1862 2.933495 TGACGAGTATTTCCGGACAG 57.067 50.000 1.83 0.00 0.00 3.51
1483 1865 4.459390 TTCAATGACGAGTATTTCCGGA 57.541 40.909 0.00 0.00 0.00 5.14
1484 1866 5.501715 CATTTCAATGACGAGTATTTCCGG 58.498 41.667 0.00 0.00 38.70 5.14
1485 1867 5.293324 TCCATTTCAATGACGAGTATTTCCG 59.707 40.000 0.81 0.00 38.70 4.30
1486 1868 6.677781 TCCATTTCAATGACGAGTATTTCC 57.322 37.500 0.81 0.00 38.70 3.13
1487 1869 7.697691 ACATCCATTTCAATGACGAGTATTTC 58.302 34.615 0.81 0.00 38.70 2.17
1489 1871 8.908786 ATACATCCATTTCAATGACGAGTATT 57.091 30.769 0.81 0.00 38.70 1.89
1492 1874 6.586344 AGATACATCCATTTCAATGACGAGT 58.414 36.000 0.81 0.00 38.70 4.18
1493 1875 8.084684 TCTAGATACATCCATTTCAATGACGAG 58.915 37.037 0.81 0.00 38.70 4.18
1494 1876 7.951591 TCTAGATACATCCATTTCAATGACGA 58.048 34.615 0.81 0.00 38.70 4.20
1495 1877 8.654215 CATCTAGATACATCCATTTCAATGACG 58.346 37.037 4.54 0.00 38.70 4.35
1496 1878 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
1528 1910 8.717717 TGGATGAAAATGGATGTATCTAGAACT 58.282 33.333 0.00 0.00 0.00 3.01
1529 1911 8.908786 TGGATGAAAATGGATGTATCTAGAAC 57.091 34.615 0.00 0.00 0.00 3.01
1534 1916 9.204337 TCAAAATGGATGAAAATGGATGTATCT 57.796 29.630 0.00 0.00 0.00 1.98
1535 1917 9.991906 ATCAAAATGGATGAAAATGGATGTATC 57.008 29.630 0.00 0.00 0.00 2.24
1536 1918 9.772973 CATCAAAATGGATGAAAATGGATGTAT 57.227 29.630 0.00 0.00 46.00 2.29
1549 1931 9.297586 CAGAATTACTTGTCATCAAAATGGATG 57.702 33.333 0.00 0.00 44.78 3.51
1550 1932 8.472413 CCAGAATTACTTGTCATCAAAATGGAT 58.528 33.333 0.00 0.00 33.42 3.41
1551 1933 7.669304 TCCAGAATTACTTGTCATCAAAATGGA 59.331 33.333 0.00 0.00 33.42 3.41
1552 1934 7.756722 GTCCAGAATTACTTGTCATCAAAATGG 59.243 37.037 0.00 0.00 33.42 3.16
1553 1935 7.482743 CGTCCAGAATTACTTGTCATCAAAATG 59.517 37.037 0.00 0.00 32.87 2.32
1554 1936 7.362056 CCGTCCAGAATTACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 32.87 1.82
1555 1937 6.072728 CCGTCCAGAATTACTTGTCATCAAAA 60.073 38.462 0.00 0.00 32.87 2.44
1556 1938 5.411361 CCGTCCAGAATTACTTGTCATCAAA 59.589 40.000 0.00 0.00 32.87 2.69
1557 1939 4.935205 CCGTCCAGAATTACTTGTCATCAA 59.065 41.667 0.00 0.00 0.00 2.57
1558 1940 4.221924 TCCGTCCAGAATTACTTGTCATCA 59.778 41.667 0.00 0.00 0.00 3.07
1559 1941 4.755411 TCCGTCCAGAATTACTTGTCATC 58.245 43.478 0.00 0.00 0.00 2.92
1560 1942 4.383118 CCTCCGTCCAGAATTACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
1561 1943 3.056107 CCTCCGTCCAGAATTACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
1562 1944 3.522553 CCTCCGTCCAGAATTACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
1563 1945 2.236395 CCCTCCGTCCAGAATTACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
1564 1946 2.500098 TCCCTCCGTCCAGAATTACTTG 59.500 50.000 0.00 0.00 0.00 3.16
1565 1947 2.766828 CTCCCTCCGTCCAGAATTACTT 59.233 50.000 0.00 0.00 0.00 2.24
1566 1948 2.292323 ACTCCCTCCGTCCAGAATTACT 60.292 50.000 0.00 0.00 0.00 2.24
1567 1949 2.108970 ACTCCCTCCGTCCAGAATTAC 58.891 52.381 0.00 0.00 0.00 1.89
1568 1950 2.544844 ACTCCCTCCGTCCAGAATTA 57.455 50.000 0.00 0.00 0.00 1.40
1569 1951 2.544844 TACTCCCTCCGTCCAGAATT 57.455 50.000 0.00 0.00 0.00 2.17
1570 1952 2.091278 TGATACTCCCTCCGTCCAGAAT 60.091 50.000 0.00 0.00 0.00 2.40
1571 1953 1.286849 TGATACTCCCTCCGTCCAGAA 59.713 52.381 0.00 0.00 0.00 3.02
1572 1954 0.924090 TGATACTCCCTCCGTCCAGA 59.076 55.000 0.00 0.00 0.00 3.86
1573 1955 1.776662 TTGATACTCCCTCCGTCCAG 58.223 55.000 0.00 0.00 0.00 3.86
1574 1956 2.471815 ATTGATACTCCCTCCGTCCA 57.528 50.000 0.00 0.00 0.00 4.02
1575 1957 4.100498 TGTTAATTGATACTCCCTCCGTCC 59.900 45.833 0.00 0.00 0.00 4.79
1576 1958 5.272283 TGTTAATTGATACTCCCTCCGTC 57.728 43.478 0.00 0.00 0.00 4.79
1577 1959 5.046159 TGTTGTTAATTGATACTCCCTCCGT 60.046 40.000 0.00 0.00 0.00 4.69
1578 1960 5.424757 TGTTGTTAATTGATACTCCCTCCG 58.575 41.667 0.00 0.00 0.00 4.63
1579 1961 5.297029 GCTGTTGTTAATTGATACTCCCTCC 59.703 44.000 0.00 0.00 0.00 4.30
1580 1962 5.880332 TGCTGTTGTTAATTGATACTCCCTC 59.120 40.000 0.00 0.00 0.00 4.30
1581 1963 5.815581 TGCTGTTGTTAATTGATACTCCCT 58.184 37.500 0.00 0.00 0.00 4.20
1582 1964 6.151144 AGTTGCTGTTGTTAATTGATACTCCC 59.849 38.462 0.00 0.00 0.00 4.30
1583 1965 7.094805 TGAGTTGCTGTTGTTAATTGATACTCC 60.095 37.037 0.00 0.00 0.00 3.85
1584 1966 7.746475 GTGAGTTGCTGTTGTTAATTGATACTC 59.254 37.037 0.00 0.00 0.00 2.59
1585 1967 7.445402 AGTGAGTTGCTGTTGTTAATTGATACT 59.555 33.333 0.00 0.00 0.00 2.12
1586 1968 7.535258 CAGTGAGTTGCTGTTGTTAATTGATAC 59.465 37.037 0.00 0.00 0.00 2.24
1587 1969 7.443879 TCAGTGAGTTGCTGTTGTTAATTGATA 59.556 33.333 0.00 0.00 35.60 2.15
1588 1970 6.262944 TCAGTGAGTTGCTGTTGTTAATTGAT 59.737 34.615 0.00 0.00 35.60 2.57
1589 1971 5.588246 TCAGTGAGTTGCTGTTGTTAATTGA 59.412 36.000 0.00 0.00 35.60 2.57
1603 2009 4.999950 AGTTTTAGCCAGATCAGTGAGTTG 59.000 41.667 0.00 0.00 0.00 3.16
1676 2082 7.894376 AAGTAAATGAATTGTGATTTGCTGG 57.106 32.000 0.00 0.00 35.48 4.85
1732 2257 9.761504 TTCAATTTTAGCAAAATCAGTGATTCA 57.238 25.926 18.52 0.22 40.05 2.57
1831 2359 9.106070 GTTTATATCCCACTGAGTTAAACGATT 57.894 33.333 0.00 0.00 30.80 3.34
1834 2362 6.019318 CCGTTTATATCCCACTGAGTTAAACG 60.019 42.308 21.48 21.48 45.55 3.60
1867 2397 1.109323 AGTGAACAGCCCCAGTTTGC 61.109 55.000 0.00 0.00 0.00 3.68
1914 2445 2.947652 AGACGCTGCAATGAATAAGCAT 59.052 40.909 0.00 0.00 37.68 3.79
1944 2477 5.487153 AGATACTATCGGTGTATCGCATC 57.513 43.478 13.46 0.00 46.34 3.91
2148 2681 4.750098 TGAAACGAACTTAGAAGCAAGGAG 59.250 41.667 0.00 0.00 0.00 3.69
2169 2703 4.824537 TCGGATGAAACAAAACCTGATTGA 59.175 37.500 0.00 0.00 0.00 2.57
2186 2720 8.681903 AGTTGATACTAAATGCATCGTCGGATG 61.682 40.741 0.00 0.00 41.98 3.51
2219 2753 8.503428 ACTAAGATGACTCCATTTGGATATCT 57.497 34.615 2.05 7.37 44.46 1.98
2222 2760 8.642432 CAGTACTAAGATGACTCCATTTGGATA 58.358 37.037 0.00 0.00 44.46 2.59
2226 2764 6.536582 CACCAGTACTAAGATGACTCCATTTG 59.463 42.308 0.00 0.00 32.09 2.32
2258 2796 9.970553 ATTTATATGCAGATGACTATGTGGATT 57.029 29.630 3.54 0.00 39.02 3.01
2321 2866 1.610038 TGCTCATCCAAACACTGCTTG 59.390 47.619 0.00 0.00 0.00 4.01
2322 2867 1.985473 TGCTCATCCAAACACTGCTT 58.015 45.000 0.00 0.00 0.00 3.91
2351 2896 5.471797 TCCTATGAAAAGAATTGCACGTGAA 59.528 36.000 22.23 5.66 0.00 3.18
2354 2899 5.163622 CCATCCTATGAAAAGAATTGCACGT 60.164 40.000 0.00 0.00 0.00 4.49
2626 3174 2.498885 GCCCCTCAATGAGCTTGATTTT 59.501 45.455 4.40 0.00 42.87 1.82
2749 3297 5.412594 TGATAACTCCACTTTCATCACTTGC 59.587 40.000 0.00 0.00 0.00 4.01
2898 3446 4.261031 GCACCACACGTAATTTTCTGTTCT 60.261 41.667 0.00 0.00 0.00 3.01
3047 3680 5.165961 ACTTAGTGCACCACATCATTACT 57.834 39.130 14.63 0.00 36.74 2.24
3171 3842 0.743688 TGACAAAACGCCAAGTGCAT 59.256 45.000 0.00 0.00 41.33 3.96
3479 4176 2.439409 TGAACAGGCAACATGGATCAG 58.561 47.619 0.00 0.00 41.41 2.90
3722 4484 2.896685 CCAACATTTTCCAGTGCCCTAA 59.103 45.455 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.