Multiple sequence alignment - TraesCS1B01G057000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G057000 chr1B 100.000 2354 0 0 1 2354 39617194 39614841 0.000000e+00 4348.0
1 TraesCS1B01G057000 chr1B 95.298 638 25 3 298 932 169012833 169012198 0.000000e+00 1007.0
2 TraesCS1B01G057000 chr1B 94.984 638 28 2 300 933 14690746 14691383 0.000000e+00 998.0
3 TraesCS1B01G057000 chr1B 94.295 298 17 0 1 298 14690344 14690641 7.670000e-125 457.0
4 TraesCS1B01G057000 chr1B 94.276 297 14 2 1 296 174768289 174767995 3.570000e-123 451.0
5 TraesCS1B01G057000 chr2A 95.095 632 28 1 298 926 770189712 770190343 0.000000e+00 992.0
6 TraesCS1B01G057000 chr2A 92.958 639 26 3 298 933 692932654 692933276 0.000000e+00 913.0
7 TraesCS1B01G057000 chr2A 78.906 128 24 3 295 422 716882439 716882315 1.500000e-12 84.2
8 TraesCS1B01G057000 chr3B 94.210 639 34 1 298 933 752375333 752374695 0.000000e+00 972.0
9 TraesCS1B01G057000 chr3B 94.650 486 22 4 1867 2352 22082173 22081692 0.000000e+00 750.0
10 TraesCS1B01G057000 chr3B 93.725 494 25 4 1867 2354 821829577 821829084 0.000000e+00 736.0
11 TraesCS1B01G057000 chr3B 94.828 290 13 2 1 289 31801690 31801978 3.570000e-123 451.0
12 TraesCS1B01G057000 chr3B 82.166 157 24 4 301 455 825257611 825257457 5.280000e-27 132.0
13 TraesCS1B01G057000 chr3A 94.146 632 34 2 298 927 750809707 750809077 0.000000e+00 959.0
14 TraesCS1B01G057000 chr3A 95.156 289 14 0 1 289 750810104 750809816 7.670000e-125 457.0
15 TraesCS1B01G057000 chr6A 91.918 631 32 2 296 923 477412090 477411476 0.000000e+00 865.0
16 TraesCS1B01G057000 chr7D 94.769 497 20 5 1864 2354 186631938 186632434 0.000000e+00 769.0
17 TraesCS1B01G057000 chr7D 88.578 464 33 6 473 933 586483167 586483613 1.590000e-151 545.0
18 TraesCS1B01G057000 chr7D 94.276 297 15 2 1 296 204100000 204100295 9.920000e-124 453.0
19 TraesCS1B01G057000 chr5D 94.177 498 23 5 1863 2354 395019714 395019217 0.000000e+00 754.0
20 TraesCS1B01G057000 chr5B 94.212 501 18 8 1864 2354 604479589 604480088 0.000000e+00 754.0
21 TraesCS1B01G057000 chr6D 94.165 497 20 5 1867 2354 143498747 143498251 0.000000e+00 749.0
22 TraesCS1B01G057000 chr6D 94.613 297 14 2 1 296 423443553 423443258 2.130000e-125 459.0
23 TraesCS1B01G057000 chr6D 95.322 171 8 0 298 468 60229411 60229581 2.980000e-69 272.0
24 TraesCS1B01G057000 chr4B 93.800 500 22 7 1863 2354 355502980 355503478 0.000000e+00 743.0
25 TraesCS1B01G057000 chr6B 93.737 495 27 3 1864 2354 528081871 528082365 0.000000e+00 739.0
26 TraesCS1B01G057000 chr6B 83.582 67 11 0 293 359 88442418 88442484 1.950000e-06 63.9
27 TraesCS1B01G057000 chr1D 94.082 490 23 6 1867 2354 46201363 46200878 0.000000e+00 739.0
28 TraesCS1B01G057000 chr1D 89.552 469 26 7 986 1446 24054503 24054956 7.300000e-160 573.0
29 TraesCS1B01G057000 chr1D 93.987 316 19 0 1550 1865 24061698 24062013 1.640000e-131 479.0
30 TraesCS1B01G057000 chr1D 95.322 171 8 0 298 468 235984824 235984654 2.980000e-69 272.0
31 TraesCS1B01G057000 chr1A 89.771 567 33 9 959 1505 24331099 24331660 0.000000e+00 702.0
32 TraesCS1B01G057000 chr1A 82.789 337 33 7 1536 1866 24331897 24332214 6.410000e-71 278.0
33 TraesCS1B01G057000 chr2D 85.535 477 62 6 464 933 378733123 378733599 2.100000e-135 492.0
34 TraesCS1B01G057000 chr3D 95.286 297 13 1 1 296 20700569 20700865 9.850000e-129 470.0
35 TraesCS1B01G057000 chr3D 95.286 297 12 2 1 296 110587664 110587959 9.850000e-129 470.0
36 TraesCS1B01G057000 chr3D 94.949 297 13 2 1 296 31388498 31388203 4.580000e-127 464.0
37 TraesCS1B01G057000 chr3D 94.000 300 15 3 1 299 538407249 538407546 3.570000e-123 451.0
38 TraesCS1B01G057000 chr3D 80.294 477 85 7 466 933 19796958 19797434 3.720000e-93 351.0
39 TraesCS1B01G057000 chr2B 78.226 124 23 4 294 417 150988726 150988845 2.510000e-10 76.8
40 TraesCS1B01G057000 chr4D 76.562 128 27 3 295 422 134567279 134567155 1.510000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G057000 chr1B 39614841 39617194 2353 True 4348.0 4348 100.0000 1 2354 1 chr1B.!!$R1 2353
1 TraesCS1B01G057000 chr1B 169012198 169012833 635 True 1007.0 1007 95.2980 298 932 1 chr1B.!!$R2 634
2 TraesCS1B01G057000 chr1B 14690344 14691383 1039 False 727.5 998 94.6395 1 933 2 chr1B.!!$F1 932
3 TraesCS1B01G057000 chr2A 770189712 770190343 631 False 992.0 992 95.0950 298 926 1 chr2A.!!$F2 628
4 TraesCS1B01G057000 chr2A 692932654 692933276 622 False 913.0 913 92.9580 298 933 1 chr2A.!!$F1 635
5 TraesCS1B01G057000 chr3B 752374695 752375333 638 True 972.0 972 94.2100 298 933 1 chr3B.!!$R2 635
6 TraesCS1B01G057000 chr3A 750809077 750810104 1027 True 708.0 959 94.6510 1 927 2 chr3A.!!$R1 926
7 TraesCS1B01G057000 chr6A 477411476 477412090 614 True 865.0 865 91.9180 296 923 1 chr6A.!!$R1 627
8 TraesCS1B01G057000 chr1A 24331099 24332214 1115 False 490.0 702 86.2800 959 1866 2 chr1A.!!$F1 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 277 0.745486 TGTGCAGGATGAAGCATCGG 60.745 55.0 0.0 0.0 43.44 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 2431 0.106419 AGGGAGAGAGACGCCTTAGG 60.106 60.0 0.0 0.0 38.52 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.829182 CAAAAGCCAGAAGCCCCAGT 60.829 55.000 0.00 0.00 45.47 4.00
35 36 2.632544 CCAGTCGAGCCACGTACCA 61.633 63.158 0.00 0.00 43.13 3.25
154 155 2.885113 CCACTCTGCCATCGACGA 59.115 61.111 0.00 0.00 0.00 4.20
183 184 2.528818 CCAGACAGCAACCCCCTCA 61.529 63.158 0.00 0.00 0.00 3.86
194 195 3.842923 CCCCTCATGCGCGAGTCT 61.843 66.667 12.10 0.00 0.00 3.24
273 274 2.730382 TCAATGTGCAGGATGAAGCAT 58.270 42.857 0.00 0.00 43.44 3.79
276 277 0.745486 TGTGCAGGATGAAGCATCGG 60.745 55.000 0.00 0.00 43.44 4.18
366 470 6.633500 TCAAGAAGGTAATGACACAAAAGG 57.367 37.500 0.00 0.00 0.00 3.11
423 527 1.557832 CTAGGTTTTCACCCGGATCCA 59.442 52.381 13.41 0.00 45.63 3.41
485 589 3.475494 TGTCGCCACCACCACACT 61.475 61.111 0.00 0.00 0.00 3.55
600 720 1.117749 CCTGCCAGATCCAGATCCGA 61.118 60.000 4.01 0.00 38.58 4.55
841 961 1.204786 TTGCCCAGCAGTAGCCCTTA 61.205 55.000 0.00 0.00 43.56 2.69
842 962 1.153147 GCCCAGCAGTAGCCCTTAC 60.153 63.158 0.00 0.00 43.56 2.34
939 1063 4.109675 CGGGGGTCGGGCTTCAAT 62.110 66.667 0.00 0.00 34.75 2.57
940 1064 2.359011 GGGGGTCGGGCTTCAATT 59.641 61.111 0.00 0.00 0.00 2.32
941 1065 1.304962 GGGGGTCGGGCTTCAATTT 60.305 57.895 0.00 0.00 0.00 1.82
942 1066 1.604147 GGGGGTCGGGCTTCAATTTG 61.604 60.000 0.00 0.00 0.00 2.32
943 1067 0.898326 GGGGTCGGGCTTCAATTTGT 60.898 55.000 0.00 0.00 0.00 2.83
944 1068 0.966179 GGGTCGGGCTTCAATTTGTT 59.034 50.000 0.00 0.00 0.00 2.83
945 1069 1.336795 GGGTCGGGCTTCAATTTGTTG 60.337 52.381 0.00 0.00 0.00 3.33
946 1070 1.339929 GGTCGGGCTTCAATTTGTTGT 59.660 47.619 0.00 0.00 0.00 3.32
947 1071 2.393764 GTCGGGCTTCAATTTGTTGTG 58.606 47.619 0.00 0.00 0.00 3.33
948 1072 2.028130 TCGGGCTTCAATTTGTTGTGT 58.972 42.857 0.00 0.00 0.00 3.72
949 1073 3.003897 GTCGGGCTTCAATTTGTTGTGTA 59.996 43.478 0.00 0.00 0.00 2.90
950 1074 3.252215 TCGGGCTTCAATTTGTTGTGTAG 59.748 43.478 0.00 0.00 0.00 2.74
951 1075 3.004315 CGGGCTTCAATTTGTTGTGTAGT 59.996 43.478 0.00 0.00 0.00 2.73
952 1076 4.499019 CGGGCTTCAATTTGTTGTGTAGTT 60.499 41.667 0.00 0.00 0.00 2.24
953 1077 4.982295 GGGCTTCAATTTGTTGTGTAGTTC 59.018 41.667 0.00 0.00 0.00 3.01
954 1078 4.982295 GGCTTCAATTTGTTGTGTAGTTCC 59.018 41.667 0.00 0.00 0.00 3.62
955 1079 5.221244 GGCTTCAATTTGTTGTGTAGTTCCT 60.221 40.000 0.00 0.00 0.00 3.36
956 1080 5.915196 GCTTCAATTTGTTGTGTAGTTCCTC 59.085 40.000 0.00 0.00 0.00 3.71
957 1081 5.666969 TCAATTTGTTGTGTAGTTCCTCG 57.333 39.130 0.00 0.00 0.00 4.63
1120 1251 2.181777 TCGAGTGCACCATCGAGC 59.818 61.111 22.76 1.32 42.61 5.03
1123 1254 1.875813 GAGTGCACCATCGAGCTCG 60.876 63.158 30.03 30.03 41.45 5.03
1140 1271 2.100631 CGACACCAAGATCGCCACC 61.101 63.158 0.00 0.00 0.00 4.61
1207 1338 1.607801 CCTCACTGAGCCCATCGACA 61.608 60.000 0.00 0.00 0.00 4.35
1233 1364 4.386245 GAGTGGATCGACGAGTGC 57.614 61.111 3.01 0.00 0.00 4.40
1251 1382 4.719369 GAGCGCGTCAACGAGGGT 62.719 66.667 8.43 2.67 43.02 4.34
1254 1385 3.403057 CGCGTCAACGAGGGTGTG 61.403 66.667 6.75 0.00 43.02 3.82
1279 1410 3.643978 GCGCCAGGATGATGCGTC 61.644 66.667 0.00 0.00 46.16 5.19
1283 1417 1.884464 CCAGGATGATGCGTCACCG 60.884 63.158 11.65 10.43 39.69 4.94
1309 1443 2.307049 CTGCGGTTTGTAAGCTTTTCG 58.693 47.619 3.20 1.55 0.00 3.46
1332 1466 2.685829 TACTTGCGCGGCCAATGTG 61.686 57.895 8.83 0.00 0.00 3.21
1356 1490 2.240500 GCGGCGGTTCAGATAGCTG 61.241 63.158 9.78 0.24 43.67 4.24
1357 1491 1.141881 CGGCGGTTCAGATAGCTGT 59.858 57.895 8.04 0.00 42.84 4.40
1358 1492 0.384309 CGGCGGTTCAGATAGCTGTA 59.616 55.000 8.04 0.00 42.84 2.74
1360 1494 2.408050 GGCGGTTCAGATAGCTGTATG 58.592 52.381 8.04 0.00 42.84 2.39
1361 1495 2.408050 GCGGTTCAGATAGCTGTATGG 58.592 52.381 8.04 0.00 42.84 2.74
1362 1496 2.408050 CGGTTCAGATAGCTGTATGGC 58.592 52.381 8.04 0.00 42.84 4.40
1368 1504 2.998670 CAGATAGCTGTATGGCAATCCG 59.001 50.000 0.00 0.00 37.37 4.18
1374 1510 0.393673 TGTATGGCAATCCGTGGGTG 60.394 55.000 0.00 0.00 32.75 4.61
1377 1513 3.443045 GGCAATCCGTGGGTGCAG 61.443 66.667 14.64 0.00 40.12 4.41
1380 1516 2.360350 AATCCGTGGGTGCAGCAG 60.360 61.111 19.06 8.20 0.00 4.24
1400 1540 4.083643 GCAGTTAATGGTGATCGATCCATG 60.084 45.833 22.31 10.37 42.73 3.66
1415 1557 1.133823 TCCATGTCTTGGTTGCACAGT 60.134 47.619 4.76 0.00 46.52 3.55
1491 1633 4.386424 GCCCACCTCCCAGTAATAAGAAAT 60.386 45.833 0.00 0.00 0.00 2.17
1505 1647 2.380064 AGAAATGTCCCTGCAAACCA 57.620 45.000 0.00 0.00 0.00 3.67
1506 1648 2.242043 AGAAATGTCCCTGCAAACCAG 58.758 47.619 0.00 0.00 41.41 4.00
1507 1649 1.963515 GAAATGTCCCTGCAAACCAGT 59.036 47.619 0.00 0.00 40.06 4.00
1508 1650 2.969821 AATGTCCCTGCAAACCAGTA 57.030 45.000 0.00 0.00 40.06 2.74
1509 1651 2.200373 ATGTCCCTGCAAACCAGTAC 57.800 50.000 0.00 0.00 40.06 2.73
1533 1698 4.081322 ACAGTTGTCCGTTAACCTGAAT 57.919 40.909 12.43 0.00 0.00 2.57
1534 1699 4.457466 ACAGTTGTCCGTTAACCTGAATT 58.543 39.130 12.43 0.00 0.00 2.17
1535 1700 5.613329 ACAGTTGTCCGTTAACCTGAATTA 58.387 37.500 12.43 0.00 0.00 1.40
1536 1701 6.235664 ACAGTTGTCCGTTAACCTGAATTAT 58.764 36.000 12.43 0.00 0.00 1.28
1537 1702 7.388437 ACAGTTGTCCGTTAACCTGAATTATA 58.612 34.615 12.43 0.00 0.00 0.98
1538 1703 8.044908 ACAGTTGTCCGTTAACCTGAATTATAT 58.955 33.333 12.43 0.00 0.00 0.86
1539 1704 9.537192 CAGTTGTCCGTTAACCTGAATTATATA 57.463 33.333 0.00 0.00 0.00 0.86
1651 2000 8.980596 AGAAATTAATATTGAATTGAGGGTGCA 58.019 29.630 0.00 0.00 0.00 4.57
1652 2001 8.947055 AAATTAATATTGAATTGAGGGTGCAC 57.053 30.769 8.80 8.80 0.00 4.57
1653 2002 7.658525 ATTAATATTGAATTGAGGGTGCACA 57.341 32.000 20.43 0.00 0.00 4.57
1654 2003 7.658525 TTAATATTGAATTGAGGGTGCACAT 57.341 32.000 20.43 6.31 0.00 3.21
1655 2004 5.779529 ATATTGAATTGAGGGTGCACATC 57.220 39.130 20.43 16.15 0.00 3.06
1656 2005 1.452110 TGAATTGAGGGTGCACATCG 58.548 50.000 20.43 0.00 0.00 3.84
1657 2006 0.099436 GAATTGAGGGTGCACATCGC 59.901 55.000 20.43 12.28 42.89 4.58
1658 2007 1.315257 AATTGAGGGTGCACATCGCC 61.315 55.000 20.43 10.59 44.67 5.54
1659 2008 2.202236 ATTGAGGGTGCACATCGCCT 62.202 55.000 20.43 15.67 44.77 5.52
1660 2009 2.512515 GAGGGTGCACATCGCCTC 60.513 66.667 20.43 20.09 44.77 4.70
1661 2010 3.005539 AGGGTGCACATCGCCTCT 61.006 61.111 20.43 0.00 44.77 3.69
1662 2011 2.045926 GGGTGCACATCGCCTCTT 60.046 61.111 20.43 0.00 44.77 2.85
1663 2012 2.109126 GGGTGCACATCGCCTCTTC 61.109 63.158 20.43 0.00 44.77 2.87
1664 2013 2.109126 GGTGCACATCGCCTCTTCC 61.109 63.158 20.43 0.00 42.12 3.46
1671 2020 1.625818 ACATCGCCTCTTCCTTCAGTT 59.374 47.619 0.00 0.00 0.00 3.16
1685 2034 6.048732 TCCTTCAGTTGATGTACAATAGCA 57.951 37.500 0.00 0.00 40.76 3.49
1693 2042 6.371548 AGTTGATGTACAATAGCATTGTTCGT 59.628 34.615 16.19 13.26 40.76 3.85
1696 2045 2.919666 ACAATAGCATTGTTCGTGGC 57.080 45.000 8.21 0.00 0.00 5.01
1708 2057 2.228582 TGTTCGTGGCTCATTTGGATTG 59.771 45.455 0.00 0.00 0.00 2.67
1709 2058 2.198827 TCGTGGCTCATTTGGATTGT 57.801 45.000 0.00 0.00 0.00 2.71
1710 2059 2.513753 TCGTGGCTCATTTGGATTGTT 58.486 42.857 0.00 0.00 0.00 2.83
1711 2060 3.680490 TCGTGGCTCATTTGGATTGTTA 58.320 40.909 0.00 0.00 0.00 2.41
1712 2061 3.689161 TCGTGGCTCATTTGGATTGTTAG 59.311 43.478 0.00 0.00 0.00 2.34
1725 2074 1.607225 TTGTTAGGGAGGCCATGGAT 58.393 50.000 18.40 1.89 0.00 3.41
1727 2076 2.338809 TGTTAGGGAGGCCATGGATAG 58.661 52.381 18.40 0.00 0.00 2.08
1741 2090 5.395768 GCCATGGATAGGCGTATCTTAAGAT 60.396 44.000 21.28 21.28 43.15 2.40
1742 2091 6.276847 CCATGGATAGGCGTATCTTAAGATC 58.723 44.000 21.17 11.91 36.11 2.75
1744 2093 5.008331 TGGATAGGCGTATCTTAAGATCGT 58.992 41.667 21.17 11.27 36.11 3.73
1746 2095 5.106237 GGATAGGCGTATCTTAAGATCGTGT 60.106 44.000 21.17 15.75 36.11 4.49
1752 2101 6.254157 GGCGTATCTTAAGATCGTGTTAAACA 59.746 38.462 21.17 0.00 36.05 2.83
1765 2119 9.274065 GATCGTGTTAAACAAAATAGTTGATCC 57.726 33.333 0.00 0.00 0.00 3.36
1769 2123 2.825086 ACAAAATAGTTGATCCGCGC 57.175 45.000 0.00 0.00 0.00 6.86
1775 2129 4.256090 GTTGATCCGCGCCATGCC 62.256 66.667 0.00 0.00 42.08 4.40
1781 2135 3.349006 CCGCGCCATGCCTATGAC 61.349 66.667 0.00 0.00 42.08 3.06
1801 2155 5.253330 TGACAACATAGGGAAAATCAGGAC 58.747 41.667 0.00 0.00 0.00 3.85
1809 2163 4.401925 AGGGAAAATCAGGACAGTCAAAG 58.598 43.478 2.17 0.00 0.00 2.77
1836 2190 6.972901 TGACTTATTAATGAGTAGCAGTGTCG 59.027 38.462 12.47 0.00 0.00 4.35
1848 2202 1.411246 GCAGTGTCGGGGTGTATCATA 59.589 52.381 0.00 0.00 0.00 2.15
1851 2205 1.045407 TGTCGGGGTGTATCATAGGC 58.955 55.000 0.00 0.00 0.00 3.93
1870 2224 9.806448 TCATAGGCCAATTTAGAAATATTAGCA 57.194 29.630 5.01 0.00 0.00 3.49
1874 2228 9.822185 AGGCCAATTTAGAAATATTAGCAAAAG 57.178 29.630 5.01 0.00 0.00 2.27
1875 2229 9.816354 GGCCAATTTAGAAATATTAGCAAAAGA 57.184 29.630 0.00 0.00 0.00 2.52
1880 2234 5.757850 AGAAATATTAGCAAAAGAGCCCG 57.242 39.130 0.00 0.00 34.23 6.13
1881 2235 5.193679 AGAAATATTAGCAAAAGAGCCCGT 58.806 37.500 0.00 0.00 34.23 5.28
1882 2236 4.900635 AATATTAGCAAAAGAGCCCGTG 57.099 40.909 0.00 0.00 34.23 4.94
1883 2237 0.811281 ATTAGCAAAAGAGCCCGTGC 59.189 50.000 0.00 0.00 37.26 5.34
1884 2238 1.573829 TTAGCAAAAGAGCCCGTGCG 61.574 55.000 0.00 0.00 44.33 5.34
1885 2239 2.725203 TAGCAAAAGAGCCCGTGCGT 62.725 55.000 0.00 0.00 44.33 5.24
1886 2240 3.030652 CAAAAGAGCCCGTGCGTT 58.969 55.556 0.00 0.00 44.33 4.84
1887 2241 1.370414 CAAAAGAGCCCGTGCGTTG 60.370 57.895 0.00 0.00 44.33 4.10
1888 2242 3.194272 AAAAGAGCCCGTGCGTTGC 62.194 57.895 0.00 0.00 44.33 4.17
1889 2243 4.927782 AAGAGCCCGTGCGTTGCA 62.928 61.111 6.22 0.00 44.33 4.08
1890 2244 4.927782 AGAGCCCGTGCGTTGCAA 62.928 61.111 0.00 0.00 41.47 4.08
1891 2245 4.683334 GAGCCCGTGCGTTGCAAC 62.683 66.667 19.89 19.89 41.47 4.17
1903 2257 2.401017 GTTGCAACGGGAGAGAAAAC 57.599 50.000 14.90 0.00 0.00 2.43
1904 2258 1.673920 GTTGCAACGGGAGAGAAAACA 59.326 47.619 14.90 0.00 0.00 2.83
1905 2259 2.270352 TGCAACGGGAGAGAAAACAT 57.730 45.000 0.00 0.00 0.00 2.71
1906 2260 3.410631 TGCAACGGGAGAGAAAACATA 57.589 42.857 0.00 0.00 0.00 2.29
1907 2261 3.745799 TGCAACGGGAGAGAAAACATAA 58.254 40.909 0.00 0.00 0.00 1.90
1908 2262 3.500680 TGCAACGGGAGAGAAAACATAAC 59.499 43.478 0.00 0.00 0.00 1.89
1909 2263 3.424433 GCAACGGGAGAGAAAACATAACG 60.424 47.826 0.00 0.00 0.00 3.18
1910 2264 2.344025 ACGGGAGAGAAAACATAACGC 58.656 47.619 0.00 0.00 0.00 4.84
1911 2265 2.289195 ACGGGAGAGAAAACATAACGCA 60.289 45.455 0.00 0.00 0.00 5.24
1912 2266 2.093783 CGGGAGAGAAAACATAACGCAC 59.906 50.000 0.00 0.00 0.00 5.34
1913 2267 3.071479 GGGAGAGAAAACATAACGCACA 58.929 45.455 0.00 0.00 0.00 4.57
1914 2268 3.120304 GGGAGAGAAAACATAACGCACAC 60.120 47.826 0.00 0.00 0.00 3.82
1915 2269 3.746492 GGAGAGAAAACATAACGCACACT 59.254 43.478 0.00 0.00 0.00 3.55
1916 2270 4.143094 GGAGAGAAAACATAACGCACACTC 60.143 45.833 0.00 0.00 0.00 3.51
1917 2271 4.632153 AGAGAAAACATAACGCACACTCT 58.368 39.130 0.00 0.00 0.00 3.24
1918 2272 5.057149 AGAGAAAACATAACGCACACTCTT 58.943 37.500 0.00 0.00 0.00 2.85
1919 2273 6.220930 AGAGAAAACATAACGCACACTCTTA 58.779 36.000 0.00 0.00 0.00 2.10
1920 2274 6.704493 AGAGAAAACATAACGCACACTCTTAA 59.296 34.615 0.00 0.00 0.00 1.85
1921 2275 6.656003 AGAAAACATAACGCACACTCTTAAC 58.344 36.000 0.00 0.00 0.00 2.01
1922 2276 6.482308 AGAAAACATAACGCACACTCTTAACT 59.518 34.615 0.00 0.00 0.00 2.24
1923 2277 5.840940 AACATAACGCACACTCTTAACTC 57.159 39.130 0.00 0.00 0.00 3.01
1924 2278 4.878439 ACATAACGCACACTCTTAACTCA 58.122 39.130 0.00 0.00 0.00 3.41
1925 2279 5.294356 ACATAACGCACACTCTTAACTCAA 58.706 37.500 0.00 0.00 0.00 3.02
1926 2280 5.176958 ACATAACGCACACTCTTAACTCAAC 59.823 40.000 0.00 0.00 0.00 3.18
1927 2281 3.173668 ACGCACACTCTTAACTCAACA 57.826 42.857 0.00 0.00 0.00 3.33
1928 2282 3.527533 ACGCACACTCTTAACTCAACAA 58.472 40.909 0.00 0.00 0.00 2.83
1929 2283 3.308866 ACGCACACTCTTAACTCAACAAC 59.691 43.478 0.00 0.00 0.00 3.32
1930 2284 3.303132 CGCACACTCTTAACTCAACAACC 60.303 47.826 0.00 0.00 0.00 3.77
1931 2285 3.625764 GCACACTCTTAACTCAACAACCA 59.374 43.478 0.00 0.00 0.00 3.67
1932 2286 4.275936 GCACACTCTTAACTCAACAACCAT 59.724 41.667 0.00 0.00 0.00 3.55
1933 2287 5.560953 GCACACTCTTAACTCAACAACCATC 60.561 44.000 0.00 0.00 0.00 3.51
1934 2288 5.527214 CACACTCTTAACTCAACAACCATCA 59.473 40.000 0.00 0.00 0.00 3.07
1935 2289 5.527582 ACACTCTTAACTCAACAACCATCAC 59.472 40.000 0.00 0.00 0.00 3.06
1936 2290 5.760253 CACTCTTAACTCAACAACCATCACT 59.240 40.000 0.00 0.00 0.00 3.41
1937 2291 5.992217 ACTCTTAACTCAACAACCATCACTC 59.008 40.000 0.00 0.00 0.00 3.51
1938 2292 5.924356 TCTTAACTCAACAACCATCACTCA 58.076 37.500 0.00 0.00 0.00 3.41
1939 2293 6.353323 TCTTAACTCAACAACCATCACTCAA 58.647 36.000 0.00 0.00 0.00 3.02
1940 2294 6.483307 TCTTAACTCAACAACCATCACTCAAG 59.517 38.462 0.00 0.00 0.00 3.02
1941 2295 4.422073 ACTCAACAACCATCACTCAAGA 57.578 40.909 0.00 0.00 0.00 3.02
1942 2296 4.130118 ACTCAACAACCATCACTCAAGAC 58.870 43.478 0.00 0.00 0.00 3.01
1943 2297 3.476552 TCAACAACCATCACTCAAGACC 58.523 45.455 0.00 0.00 0.00 3.85
1944 2298 3.118075 TCAACAACCATCACTCAAGACCA 60.118 43.478 0.00 0.00 0.00 4.02
1945 2299 3.795688 ACAACCATCACTCAAGACCAT 57.204 42.857 0.00 0.00 0.00 3.55
1946 2300 4.908601 ACAACCATCACTCAAGACCATA 57.091 40.909 0.00 0.00 0.00 2.74
1947 2301 5.241403 ACAACCATCACTCAAGACCATAA 57.759 39.130 0.00 0.00 0.00 1.90
1948 2302 5.819991 ACAACCATCACTCAAGACCATAAT 58.180 37.500 0.00 0.00 0.00 1.28
1949 2303 6.957631 ACAACCATCACTCAAGACCATAATA 58.042 36.000 0.00 0.00 0.00 0.98
1950 2304 7.050377 ACAACCATCACTCAAGACCATAATAG 58.950 38.462 0.00 0.00 0.00 1.73
1951 2305 6.179906 ACCATCACTCAAGACCATAATAGG 57.820 41.667 0.00 0.00 0.00 2.57
1952 2306 5.667626 ACCATCACTCAAGACCATAATAGGT 59.332 40.000 0.00 0.00 46.82 3.08
1972 2326 5.954335 AGGTCCATCTTCTTTATTTTTGCG 58.046 37.500 0.00 0.00 0.00 4.85
1973 2327 5.710099 AGGTCCATCTTCTTTATTTTTGCGA 59.290 36.000 0.00 0.00 0.00 5.10
1974 2328 6.030228 GGTCCATCTTCTTTATTTTTGCGAG 58.970 40.000 0.00 0.00 0.00 5.03
1975 2329 6.030228 GTCCATCTTCTTTATTTTTGCGAGG 58.970 40.000 0.00 0.00 0.00 4.63
1976 2330 4.800471 CCATCTTCTTTATTTTTGCGAGGC 59.200 41.667 0.00 0.00 0.00 4.70
1977 2331 5.401550 CATCTTCTTTATTTTTGCGAGGCA 58.598 37.500 0.00 0.00 36.47 4.75
1978 2332 5.643379 TCTTCTTTATTTTTGCGAGGCAT 57.357 34.783 0.00 0.00 38.76 4.40
1979 2333 5.640732 TCTTCTTTATTTTTGCGAGGCATC 58.359 37.500 0.00 0.00 38.76 3.91
1980 2334 5.182950 TCTTCTTTATTTTTGCGAGGCATCA 59.817 36.000 0.00 0.00 38.76 3.07
1981 2335 5.581126 TCTTTATTTTTGCGAGGCATCAT 57.419 34.783 0.00 0.00 38.76 2.45
1982 2336 6.691754 TCTTTATTTTTGCGAGGCATCATA 57.308 33.333 0.00 0.00 38.76 2.15
1983 2337 7.275888 TCTTTATTTTTGCGAGGCATCATAT 57.724 32.000 0.00 0.00 38.76 1.78
1984 2338 7.715657 TCTTTATTTTTGCGAGGCATCATATT 58.284 30.769 0.00 0.00 38.76 1.28
1985 2339 8.196771 TCTTTATTTTTGCGAGGCATCATATTT 58.803 29.630 0.00 0.00 38.76 1.40
1986 2340 7.697352 TTATTTTTGCGAGGCATCATATTTG 57.303 32.000 0.00 0.00 38.76 2.32
1987 2341 4.717233 TTTTGCGAGGCATCATATTTGT 57.283 36.364 0.00 0.00 38.76 2.83
1988 2342 3.696281 TTGCGAGGCATCATATTTGTG 57.304 42.857 0.00 0.00 38.76 3.33
1989 2343 2.642427 TGCGAGGCATCATATTTGTGT 58.358 42.857 0.00 0.00 31.71 3.72
1990 2344 3.016031 TGCGAGGCATCATATTTGTGTT 58.984 40.909 0.00 0.00 31.71 3.32
1991 2345 3.181498 TGCGAGGCATCATATTTGTGTTG 60.181 43.478 0.00 0.00 31.71 3.33
1992 2346 3.365832 CGAGGCATCATATTTGTGTTGC 58.634 45.455 0.00 2.75 41.70 4.17
1995 2349 1.854126 GCATCATATTTGTGTTGCCGC 59.146 47.619 0.42 0.00 38.34 6.53
1996 2350 2.480073 GCATCATATTTGTGTTGCCGCT 60.480 45.455 0.00 0.00 38.34 5.52
1997 2351 3.772932 CATCATATTTGTGTTGCCGCTT 58.227 40.909 0.00 0.00 0.00 4.68
1998 2352 4.733230 GCATCATATTTGTGTTGCCGCTTA 60.733 41.667 0.00 0.00 38.34 3.09
1999 2353 5.522456 CATCATATTTGTGTTGCCGCTTAT 58.478 37.500 0.00 0.00 0.00 1.73
2000 2354 5.168526 TCATATTTGTGTTGCCGCTTATC 57.831 39.130 0.00 0.00 0.00 1.75
2001 2355 2.939460 ATTTGTGTTGCCGCTTATCC 57.061 45.000 0.00 0.00 0.00 2.59
2002 2356 1.904287 TTTGTGTTGCCGCTTATCCT 58.096 45.000 0.00 0.00 0.00 3.24
2003 2357 1.448985 TTGTGTTGCCGCTTATCCTC 58.551 50.000 0.00 0.00 0.00 3.71
2004 2358 0.392461 TGTGTTGCCGCTTATCCTCC 60.392 55.000 0.00 0.00 0.00 4.30
2005 2359 0.107654 GTGTTGCCGCTTATCCTCCT 60.108 55.000 0.00 0.00 0.00 3.69
2006 2360 0.618458 TGTTGCCGCTTATCCTCCTT 59.382 50.000 0.00 0.00 0.00 3.36
2007 2361 1.300481 GTTGCCGCTTATCCTCCTTC 58.700 55.000 0.00 0.00 0.00 3.46
2008 2362 1.134371 GTTGCCGCTTATCCTCCTTCT 60.134 52.381 0.00 0.00 0.00 2.85
2009 2363 0.753262 TGCCGCTTATCCTCCTTCTC 59.247 55.000 0.00 0.00 0.00 2.87
2010 2364 0.753262 GCCGCTTATCCTCCTTCTCA 59.247 55.000 0.00 0.00 0.00 3.27
2011 2365 1.539280 GCCGCTTATCCTCCTTCTCAC 60.539 57.143 0.00 0.00 0.00 3.51
2012 2366 1.069358 CCGCTTATCCTCCTTCTCACC 59.931 57.143 0.00 0.00 0.00 4.02
2013 2367 1.069358 CGCTTATCCTCCTTCTCACCC 59.931 57.143 0.00 0.00 0.00 4.61
2014 2368 2.403561 GCTTATCCTCCTTCTCACCCT 58.596 52.381 0.00 0.00 0.00 4.34
2015 2369 2.367241 GCTTATCCTCCTTCTCACCCTC 59.633 54.545 0.00 0.00 0.00 4.30
2016 2370 2.366640 TATCCTCCTTCTCACCCTCG 57.633 55.000 0.00 0.00 0.00 4.63
2017 2371 0.336737 ATCCTCCTTCTCACCCTCGT 59.663 55.000 0.00 0.00 0.00 4.18
2018 2372 0.323542 TCCTCCTTCTCACCCTCGTC 60.324 60.000 0.00 0.00 0.00 4.20
2019 2373 1.658686 CCTCCTTCTCACCCTCGTCG 61.659 65.000 0.00 0.00 0.00 5.12
2020 2374 1.658686 CTCCTTCTCACCCTCGTCGG 61.659 65.000 0.00 0.00 0.00 4.79
2021 2375 2.182030 CTTCTCACCCTCGTCGGC 59.818 66.667 0.00 0.00 0.00 5.54
2022 2376 3.685214 CTTCTCACCCTCGTCGGCG 62.685 68.421 1.15 1.15 39.92 6.46
2023 2377 4.710167 TCTCACCCTCGTCGGCGA 62.710 66.667 13.29 13.29 45.79 5.54
2024 2378 3.518998 CTCACCCTCGTCGGCGAT 61.519 66.667 14.65 0.00 46.80 4.58
2025 2379 3.758088 CTCACCCTCGTCGGCGATG 62.758 68.421 22.59 22.59 46.80 3.84
2037 2391 3.490890 GCGATGGCCTCAGTGTTC 58.509 61.111 3.32 0.00 0.00 3.18
2038 2392 1.375908 GCGATGGCCTCAGTGTTCA 60.376 57.895 3.32 0.00 0.00 3.18
2039 2393 1.639298 GCGATGGCCTCAGTGTTCAC 61.639 60.000 3.32 0.00 0.00 3.18
2040 2394 0.320683 CGATGGCCTCAGTGTTCACA 60.321 55.000 3.32 0.00 0.00 3.58
2041 2395 1.160137 GATGGCCTCAGTGTTCACAC 58.840 55.000 3.32 1.53 46.77 3.82
2077 2431 8.736751 AAAACGTGTGTTGAATATGGTTAATC 57.263 30.769 0.00 0.00 38.62 1.75
2078 2432 6.431198 ACGTGTGTTGAATATGGTTAATCC 57.569 37.500 0.00 0.00 0.00 3.01
2079 2433 6.177610 ACGTGTGTTGAATATGGTTAATCCT 58.822 36.000 0.00 0.00 37.07 3.24
2080 2434 7.332557 ACGTGTGTTGAATATGGTTAATCCTA 58.667 34.615 0.00 0.00 37.07 2.94
2081 2435 7.825270 ACGTGTGTTGAATATGGTTAATCCTAA 59.175 33.333 0.00 0.00 37.07 2.69
2082 2436 8.335356 CGTGTGTTGAATATGGTTAATCCTAAG 58.665 37.037 0.00 0.00 37.07 2.18
2083 2437 8.621286 GTGTGTTGAATATGGTTAATCCTAAGG 58.379 37.037 0.00 0.00 37.07 2.69
2084 2438 7.284489 TGTGTTGAATATGGTTAATCCTAAGGC 59.716 37.037 0.00 0.00 37.07 4.35
2085 2439 6.485313 TGTTGAATATGGTTAATCCTAAGGCG 59.515 38.462 0.00 0.00 37.07 5.52
2086 2440 6.182507 TGAATATGGTTAATCCTAAGGCGT 57.817 37.500 0.00 0.00 37.07 5.68
2087 2441 6.228258 TGAATATGGTTAATCCTAAGGCGTC 58.772 40.000 0.00 0.00 37.07 5.19
2088 2442 6.042781 TGAATATGGTTAATCCTAAGGCGTCT 59.957 38.462 0.00 0.00 37.07 4.18
2089 2443 3.814005 TGGTTAATCCTAAGGCGTCTC 57.186 47.619 0.00 0.00 37.07 3.36
2090 2444 3.371965 TGGTTAATCCTAAGGCGTCTCT 58.628 45.455 0.00 0.00 37.07 3.10
2091 2445 3.383825 TGGTTAATCCTAAGGCGTCTCTC 59.616 47.826 0.00 0.00 37.07 3.20
2092 2446 3.637694 GGTTAATCCTAAGGCGTCTCTCT 59.362 47.826 0.00 0.00 0.00 3.10
2093 2447 4.261698 GGTTAATCCTAAGGCGTCTCTCTC 60.262 50.000 0.00 0.00 0.00 3.20
2094 2448 1.989706 ATCCTAAGGCGTCTCTCTCC 58.010 55.000 0.00 0.00 0.00 3.71
2095 2449 0.106619 TCCTAAGGCGTCTCTCTCCC 60.107 60.000 0.00 0.00 0.00 4.30
2096 2450 0.106419 CCTAAGGCGTCTCTCTCCCT 60.106 60.000 0.00 0.00 0.00 4.20
2097 2451 1.314730 CTAAGGCGTCTCTCTCCCTC 58.685 60.000 0.00 0.00 0.00 4.30
2098 2452 0.920438 TAAGGCGTCTCTCTCCCTCT 59.080 55.000 0.00 0.00 0.00 3.69
2099 2453 0.395173 AAGGCGTCTCTCTCCCTCTC 60.395 60.000 0.00 0.00 0.00 3.20
2100 2454 1.826487 GGCGTCTCTCTCCCTCTCC 60.826 68.421 0.00 0.00 0.00 3.71
2101 2455 1.826487 GCGTCTCTCTCCCTCTCCC 60.826 68.421 0.00 0.00 0.00 4.30
2102 2456 1.919771 CGTCTCTCTCCCTCTCCCT 59.080 63.158 0.00 0.00 0.00 4.20
2103 2457 0.179029 CGTCTCTCTCCCTCTCCCTC 60.179 65.000 0.00 0.00 0.00 4.30
2104 2458 1.222567 GTCTCTCTCCCTCTCCCTCT 58.777 60.000 0.00 0.00 0.00 3.69
2105 2459 1.143073 GTCTCTCTCCCTCTCCCTCTC 59.857 61.905 0.00 0.00 0.00 3.20
2106 2460 1.010793 TCTCTCTCCCTCTCCCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
2107 2461 1.421646 CTCTCTCCCTCTCCCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
2108 2462 1.010793 TCTCTCCCTCTCCCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
2109 2463 1.421646 CTCTCCCTCTCCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
2110 2464 1.010793 TCTCCCTCTCCCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
2111 2465 1.421646 CTCCCTCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
2112 2466 1.010793 TCCCTCTCCCTCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
2113 2467 1.421646 CCCTCTCCCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
2114 2468 2.412591 CCTCTCCCTCTCTCTCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
2115 2469 2.370189 CCTCTCCCTCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
2116 2470 3.312890 CTCTCCCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
2117 2471 3.309296 TCTCCCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
2118 2472 3.051803 TCTCCCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
2119 2473 3.309296 TCCCTCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
2120 2474 3.051803 TCCCTCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
2121 2475 3.070734 CCCTCTCTCTCTCTCTCTCTCTG 59.929 56.522 0.00 0.00 0.00 3.35
2122 2476 3.494048 CCTCTCTCTCTCTCTCTCTCTGC 60.494 56.522 0.00 0.00 0.00 4.26
2123 2477 3.378512 TCTCTCTCTCTCTCTCTCTGCT 58.621 50.000 0.00 0.00 0.00 4.24
2124 2478 3.386078 TCTCTCTCTCTCTCTCTCTGCTC 59.614 52.174 0.00 0.00 0.00 4.26
2125 2479 2.101415 TCTCTCTCTCTCTCTCTGCTCG 59.899 54.545 0.00 0.00 0.00 5.03
2126 2480 0.940126 CTCTCTCTCTCTCTGCTCGC 59.060 60.000 0.00 0.00 0.00 5.03
2127 2481 0.541392 TCTCTCTCTCTCTGCTCGCT 59.459 55.000 0.00 0.00 0.00 4.93
2128 2482 1.065491 TCTCTCTCTCTCTGCTCGCTT 60.065 52.381 0.00 0.00 0.00 4.68
2129 2483 1.745087 CTCTCTCTCTCTGCTCGCTTT 59.255 52.381 0.00 0.00 0.00 3.51
2130 2484 1.742831 TCTCTCTCTCTGCTCGCTTTC 59.257 52.381 0.00 0.00 0.00 2.62
2131 2485 1.745087 CTCTCTCTCTGCTCGCTTTCT 59.255 52.381 0.00 0.00 0.00 2.52
2132 2486 1.742831 TCTCTCTCTGCTCGCTTTCTC 59.257 52.381 0.00 0.00 0.00 2.87
2133 2487 1.745087 CTCTCTCTGCTCGCTTTCTCT 59.255 52.381 0.00 0.00 0.00 3.10
2134 2488 1.742831 TCTCTCTGCTCGCTTTCTCTC 59.257 52.381 0.00 0.00 0.00 3.20
2135 2489 1.472082 CTCTCTGCTCGCTTTCTCTCA 59.528 52.381 0.00 0.00 0.00 3.27
2136 2490 1.201181 TCTCTGCTCGCTTTCTCTCAC 59.799 52.381 0.00 0.00 0.00 3.51
2137 2491 1.202114 CTCTGCTCGCTTTCTCTCACT 59.798 52.381 0.00 0.00 0.00 3.41
2138 2492 1.201181 TCTGCTCGCTTTCTCTCACTC 59.799 52.381 0.00 0.00 0.00 3.51
2139 2493 1.202114 CTGCTCGCTTTCTCTCACTCT 59.798 52.381 0.00 0.00 0.00 3.24
2140 2494 1.201181 TGCTCGCTTTCTCTCACTCTC 59.799 52.381 0.00 0.00 0.00 3.20
2141 2495 1.793714 GCTCGCTTTCTCTCACTCTCG 60.794 57.143 0.00 0.00 0.00 4.04
2142 2496 0.169230 TCGCTTTCTCTCACTCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
2143 2497 1.131037 CGCTTTCTCTCACTCTCGCG 61.131 60.000 0.00 0.00 0.00 5.87
2144 2498 0.169230 GCTTTCTCTCACTCTCGCGA 59.831 55.000 9.26 9.26 0.00 5.87
2145 2499 1.202245 GCTTTCTCTCACTCTCGCGAT 60.202 52.381 10.36 0.00 0.00 4.58
2146 2500 2.449189 CTTTCTCTCACTCTCGCGATG 58.551 52.381 10.36 5.37 0.00 3.84
2147 2501 1.739067 TTCTCTCACTCTCGCGATGA 58.261 50.000 10.36 10.29 0.00 2.92
2148 2502 1.294857 TCTCTCACTCTCGCGATGAG 58.705 55.000 25.26 25.26 46.72 2.90
2159 2513 2.959516 TCGCGATGAGAAATCTGTTGT 58.040 42.857 3.71 0.00 0.00 3.32
2160 2514 3.325870 TCGCGATGAGAAATCTGTTGTT 58.674 40.909 3.71 0.00 0.00 2.83
2161 2515 3.745975 TCGCGATGAGAAATCTGTTGTTT 59.254 39.130 3.71 0.00 0.00 2.83
2162 2516 4.213270 TCGCGATGAGAAATCTGTTGTTTT 59.787 37.500 3.71 0.00 0.00 2.43
2163 2517 4.551126 CGCGATGAGAAATCTGTTGTTTTC 59.449 41.667 0.00 0.00 34.05 2.29
2164 2518 4.853743 GCGATGAGAAATCTGTTGTTTTCC 59.146 41.667 0.00 0.00 34.25 3.13
2165 2519 5.082059 CGATGAGAAATCTGTTGTTTTCCG 58.918 41.667 0.00 0.00 34.25 4.30
2166 2520 5.334105 CGATGAGAAATCTGTTGTTTTCCGT 60.334 40.000 0.00 0.00 34.25 4.69
2167 2521 5.828299 TGAGAAATCTGTTGTTTTCCGTT 57.172 34.783 0.00 0.00 34.25 4.44
2168 2522 5.577835 TGAGAAATCTGTTGTTTTCCGTTG 58.422 37.500 0.00 0.00 34.25 4.10
2169 2523 4.359706 AGAAATCTGTTGTTTTCCGTTGC 58.640 39.130 0.00 0.00 34.25 4.17
2170 2524 2.399396 ATCTGTTGTTTTCCGTTGCG 57.601 45.000 0.00 0.00 0.00 4.85
2171 2525 1.370609 TCTGTTGTTTTCCGTTGCGA 58.629 45.000 0.00 0.00 0.00 5.10
2172 2526 1.944024 TCTGTTGTTTTCCGTTGCGAT 59.056 42.857 0.00 0.00 0.00 4.58
2173 2527 3.132160 TCTGTTGTTTTCCGTTGCGATA 58.868 40.909 0.00 0.00 0.00 2.92
2174 2528 3.749088 TCTGTTGTTTTCCGTTGCGATAT 59.251 39.130 0.00 0.00 0.00 1.63
2175 2529 4.930405 TCTGTTGTTTTCCGTTGCGATATA 59.070 37.500 0.00 0.00 0.00 0.86
2176 2530 5.583061 TCTGTTGTTTTCCGTTGCGATATAT 59.417 36.000 0.00 0.00 0.00 0.86
2177 2531 6.092944 TCTGTTGTTTTCCGTTGCGATATATT 59.907 34.615 0.00 0.00 0.00 1.28
2178 2532 6.613233 TGTTGTTTTCCGTTGCGATATATTT 58.387 32.000 0.00 0.00 0.00 1.40
2179 2533 6.743627 TGTTGTTTTCCGTTGCGATATATTTC 59.256 34.615 0.00 0.00 0.00 2.17
2180 2534 6.424176 TGTTTTCCGTTGCGATATATTTCA 57.576 33.333 0.00 0.00 0.00 2.69
2181 2535 6.482835 TGTTTTCCGTTGCGATATATTTCAG 58.517 36.000 0.00 0.00 0.00 3.02
2182 2536 6.314152 TGTTTTCCGTTGCGATATATTTCAGA 59.686 34.615 0.00 0.00 0.00 3.27
2183 2537 6.525121 TTTCCGTTGCGATATATTTCAGAG 57.475 37.500 0.00 0.00 0.00 3.35
2184 2538 4.556233 TCCGTTGCGATATATTTCAGAGG 58.444 43.478 0.00 0.00 0.00 3.69
2185 2539 4.038763 TCCGTTGCGATATATTTCAGAGGT 59.961 41.667 0.00 0.00 0.00 3.85
2186 2540 5.242171 TCCGTTGCGATATATTTCAGAGGTA 59.758 40.000 0.00 0.00 0.00 3.08
2187 2541 6.071560 TCCGTTGCGATATATTTCAGAGGTAT 60.072 38.462 0.00 0.00 0.00 2.73
2188 2542 6.035005 CCGTTGCGATATATTTCAGAGGTATG 59.965 42.308 0.00 0.00 0.00 2.39
2189 2543 6.454318 CGTTGCGATATATTTCAGAGGTATGC 60.454 42.308 0.00 0.00 0.00 3.14
2190 2544 6.036577 TGCGATATATTTCAGAGGTATGCA 57.963 37.500 0.00 0.00 0.00 3.96
2191 2545 5.869344 TGCGATATATTTCAGAGGTATGCAC 59.131 40.000 0.00 0.00 0.00 4.57
2192 2546 5.004821 GCGATATATTTCAGAGGTATGCACG 59.995 44.000 0.00 0.00 0.00 5.34
2193 2547 6.093404 CGATATATTTCAGAGGTATGCACGT 58.907 40.000 0.00 0.00 0.00 4.49
2194 2548 6.033937 CGATATATTTCAGAGGTATGCACGTG 59.966 42.308 12.28 12.28 0.00 4.49
2195 2549 2.831685 TTTCAGAGGTATGCACGTGT 57.168 45.000 18.38 0.00 0.00 4.49
2196 2550 3.945981 TTTCAGAGGTATGCACGTGTA 57.054 42.857 18.38 14.09 0.00 2.90
2197 2551 3.503827 TTCAGAGGTATGCACGTGTAG 57.496 47.619 18.38 0.00 0.00 2.74
2198 2552 2.443416 TCAGAGGTATGCACGTGTAGT 58.557 47.619 18.38 6.08 0.00 2.73
2199 2553 2.823747 TCAGAGGTATGCACGTGTAGTT 59.176 45.455 18.38 0.63 0.00 2.24
2200 2554 4.011698 TCAGAGGTATGCACGTGTAGTTA 58.988 43.478 18.38 0.00 0.00 2.24
2201 2555 4.643334 TCAGAGGTATGCACGTGTAGTTAT 59.357 41.667 18.38 0.00 0.00 1.89
2202 2556 4.976731 CAGAGGTATGCACGTGTAGTTATC 59.023 45.833 18.38 10.08 0.00 1.75
2203 2557 3.961182 AGGTATGCACGTGTAGTTATCG 58.039 45.455 18.38 0.00 0.00 2.92
2204 2558 3.628942 AGGTATGCACGTGTAGTTATCGA 59.371 43.478 18.38 0.00 0.00 3.59
2205 2559 4.277672 AGGTATGCACGTGTAGTTATCGAT 59.722 41.667 18.38 2.16 0.00 3.59
2206 2560 4.381863 GGTATGCACGTGTAGTTATCGATG 59.618 45.833 18.38 0.00 0.00 3.84
2207 2561 3.497297 TGCACGTGTAGTTATCGATGT 57.503 42.857 18.38 0.00 0.00 3.06
2208 2562 3.840468 TGCACGTGTAGTTATCGATGTT 58.160 40.909 18.38 0.00 0.00 2.71
2209 2563 4.239304 TGCACGTGTAGTTATCGATGTTT 58.761 39.130 18.38 0.00 0.00 2.83
2210 2564 4.687018 TGCACGTGTAGTTATCGATGTTTT 59.313 37.500 18.38 0.00 0.00 2.43
2211 2565 5.164031 TGCACGTGTAGTTATCGATGTTTTC 60.164 40.000 18.38 0.00 0.00 2.29
2212 2566 5.061808 GCACGTGTAGTTATCGATGTTTTCT 59.938 40.000 18.38 1.98 0.00 2.52
2213 2567 6.400727 GCACGTGTAGTTATCGATGTTTTCTT 60.401 38.462 18.38 0.00 0.00 2.52
2214 2568 7.507304 CACGTGTAGTTATCGATGTTTTCTTT 58.493 34.615 8.54 0.00 0.00 2.52
2215 2569 8.007716 CACGTGTAGTTATCGATGTTTTCTTTT 58.992 33.333 8.54 0.00 0.00 2.27
2216 2570 8.553696 ACGTGTAGTTATCGATGTTTTCTTTTT 58.446 29.630 8.54 0.00 0.00 1.94
2217 2571 9.037417 CGTGTAGTTATCGATGTTTTCTTTTTC 57.963 33.333 8.54 0.00 0.00 2.29
2218 2572 9.037417 GTGTAGTTATCGATGTTTTCTTTTTCG 57.963 33.333 8.54 0.00 0.00 3.46
2219 2573 8.767085 TGTAGTTATCGATGTTTTCTTTTTCGT 58.233 29.630 8.54 0.00 0.00 3.85
2226 2580 8.481974 TCGATGTTTTCTTTTTCGTATATGGA 57.518 30.769 0.00 0.00 0.00 3.41
2227 2581 9.104965 TCGATGTTTTCTTTTTCGTATATGGAT 57.895 29.630 0.00 0.00 0.00 3.41
2238 2592 9.923143 TTTTTCGTATATGGATATAGTGGAGTG 57.077 33.333 0.00 0.00 0.00 3.51
2239 2593 8.645814 TTTCGTATATGGATATAGTGGAGTGT 57.354 34.615 0.00 0.00 0.00 3.55
2240 2594 8.645814 TTCGTATATGGATATAGTGGAGTGTT 57.354 34.615 0.00 0.00 0.00 3.32
2241 2595 8.645814 TCGTATATGGATATAGTGGAGTGTTT 57.354 34.615 0.00 0.00 0.00 2.83
2242 2596 9.743581 TCGTATATGGATATAGTGGAGTGTTTA 57.256 33.333 0.00 0.00 0.00 2.01
2247 2601 7.801716 TGGATATAGTGGAGTGTTTATTTGC 57.198 36.000 0.00 0.00 0.00 3.68
2248 2602 7.342581 TGGATATAGTGGAGTGTTTATTTGCA 58.657 34.615 0.00 0.00 0.00 4.08
2249 2603 7.831690 TGGATATAGTGGAGTGTTTATTTGCAA 59.168 33.333 0.00 0.00 0.00 4.08
2250 2604 8.850156 GGATATAGTGGAGTGTTTATTTGCAAT 58.150 33.333 0.00 0.00 0.00 3.56
2251 2605 9.884465 GATATAGTGGAGTGTTTATTTGCAATC 57.116 33.333 0.00 0.00 0.00 2.67
2252 2606 5.391312 AGTGGAGTGTTTATTTGCAATCC 57.609 39.130 0.00 1.82 46.41 3.01
2254 2608 3.769536 GGAGTGTTTATTTGCAATCCGG 58.230 45.455 0.00 0.00 39.53 5.14
2255 2609 3.442273 GGAGTGTTTATTTGCAATCCGGA 59.558 43.478 6.61 6.61 39.53 5.14
2256 2610 4.097892 GGAGTGTTTATTTGCAATCCGGAT 59.902 41.667 12.38 12.38 39.53 4.18
2257 2611 5.248870 AGTGTTTATTTGCAATCCGGATC 57.751 39.130 19.43 6.82 0.00 3.36
2258 2612 4.035017 GTGTTTATTTGCAATCCGGATCG 58.965 43.478 19.43 7.99 0.00 3.69
2259 2613 3.042887 GTTTATTTGCAATCCGGATCGC 58.957 45.455 20.78 20.78 0.00 4.58
2260 2614 1.234821 TATTTGCAATCCGGATCGCC 58.765 50.000 24.25 12.64 0.00 5.54
2261 2615 0.751277 ATTTGCAATCCGGATCGCCA 60.751 50.000 24.25 11.27 0.00 5.69
2262 2616 1.653094 TTTGCAATCCGGATCGCCAC 61.653 55.000 24.25 9.63 0.00 5.01
2263 2617 3.279875 GCAATCCGGATCGCCACC 61.280 66.667 19.43 0.00 0.00 4.61
2269 2623 2.355837 CGGATCGCCACCGGTATG 60.356 66.667 6.87 2.08 45.65 2.39
2270 2624 2.852180 CGGATCGCCACCGGTATGA 61.852 63.158 6.87 5.83 45.65 2.15
2271 2625 1.444250 GGATCGCCACCGGTATGAA 59.556 57.895 6.87 0.00 34.56 2.57
2272 2626 0.179067 GGATCGCCACCGGTATGAAA 60.179 55.000 6.87 0.00 34.56 2.69
2273 2627 1.658994 GATCGCCACCGGTATGAAAA 58.341 50.000 6.87 0.00 34.56 2.29
2274 2628 2.011222 GATCGCCACCGGTATGAAAAA 58.989 47.619 6.87 0.00 34.56 1.94
2301 2655 9.672673 ATGGATCTTGCGCTATAAATTATAAGT 57.327 29.630 9.73 0.00 0.00 2.24
2302 2656 9.502091 TGGATCTTGCGCTATAAATTATAAGTT 57.498 29.630 9.73 3.38 0.00 2.66
2305 2659 9.612620 ATCTTGCGCTATAAATTATAAGTTTGC 57.387 29.630 9.73 5.86 0.00 3.68
2306 2660 8.836413 TCTTGCGCTATAAATTATAAGTTTGCT 58.164 29.630 9.73 0.00 0.00 3.91
2307 2661 9.450807 CTTGCGCTATAAATTATAAGTTTGCTT 57.549 29.630 9.73 0.00 38.66 3.91
2308 2662 9.445786 TTGCGCTATAAATTATAAGTTTGCTTC 57.554 29.630 9.73 3.15 36.22 3.86
2309 2663 8.073768 TGCGCTATAAATTATAAGTTTGCTTCC 58.926 33.333 9.73 0.62 36.22 3.46
2310 2664 8.073768 GCGCTATAAATTATAAGTTTGCTTCCA 58.926 33.333 3.16 0.00 36.22 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.282674 ACCTGGTACGTGGCTCGA 60.283 61.111 16.57 0.00 42.86 4.04
35 36 2.227036 CCAGTTCTGCCCCAGACCT 61.227 63.158 0.00 0.00 40.46 3.85
154 155 1.004560 CTGTCTGGCGTCATGGTGT 60.005 57.895 0.00 0.00 0.00 4.16
183 184 2.105128 GGTGCTAGACTCGCGCAT 59.895 61.111 8.75 0.00 39.53 4.73
247 248 2.093553 TCATCCTGCACATTGATGACGA 60.094 45.455 8.58 0.00 39.81 4.20
303 407 2.882229 GCTCCAGACCTCTATCCGCTAT 60.882 54.545 0.00 0.00 0.00 2.97
423 527 2.290577 GCTTGATGGAGGTTCCTTCAGT 60.291 50.000 6.01 0.00 46.89 3.41
468 572 3.475494 AGTGTGGTGGTGGCGACA 61.475 61.111 0.00 0.00 38.70 4.35
573 677 1.323271 GGATCTGGCAGGTCGAGACA 61.323 60.000 20.86 0.00 32.22 3.41
583 703 0.755079 CTTCGGATCTGGATCTGGCA 59.245 55.000 16.48 6.02 42.90 4.92
600 720 2.064581 CCGTCCCGATCCCCTTCTT 61.065 63.158 0.00 0.00 0.00 2.52
649 769 3.155861 TCCGTCCCGTGGTGTTGT 61.156 61.111 0.00 0.00 0.00 3.32
933 1057 6.018262 TCGAGGAACTACACAACAAATTGAAG 60.018 38.462 0.00 0.00 41.55 3.02
934 1058 5.818336 TCGAGGAACTACACAACAAATTGAA 59.182 36.000 0.00 0.00 41.55 2.69
935 1059 5.235616 GTCGAGGAACTACACAACAAATTGA 59.764 40.000 0.00 0.00 41.55 2.57
936 1060 5.007234 TGTCGAGGAACTACACAACAAATTG 59.993 40.000 0.00 0.00 41.55 2.32
937 1061 5.007332 GTGTCGAGGAACTACACAACAAATT 59.993 40.000 0.00 0.00 41.55 1.82
938 1062 4.510340 GTGTCGAGGAACTACACAACAAAT 59.490 41.667 0.00 0.00 41.55 2.32
939 1063 3.866910 GTGTCGAGGAACTACACAACAAA 59.133 43.478 0.00 0.00 41.55 2.83
940 1064 3.450578 GTGTCGAGGAACTACACAACAA 58.549 45.455 0.00 0.00 41.55 2.83
941 1065 2.542205 CGTGTCGAGGAACTACACAACA 60.542 50.000 0.00 0.00 42.72 3.33
942 1066 2.049228 CGTGTCGAGGAACTACACAAC 58.951 52.381 0.00 0.00 42.72 3.32
943 1067 1.948834 TCGTGTCGAGGAACTACACAA 59.051 47.619 0.00 0.00 42.72 3.33
944 1068 1.596603 TCGTGTCGAGGAACTACACA 58.403 50.000 0.00 0.00 42.72 3.72
955 1079 1.728069 GCTATCCAGCTCGTGTCGA 59.272 57.895 0.00 0.00 44.93 4.20
956 1080 4.310672 GCTATCCAGCTCGTGTCG 57.689 61.111 0.00 0.00 44.93 4.35
982 1106 3.242867 CCATGGCTTCTAGGATGTAGGA 58.757 50.000 0.00 0.00 0.00 2.94
1033 1164 3.191539 CAGCTTCTTCCTCGGCGC 61.192 66.667 0.00 0.00 0.00 6.53
1035 1166 1.153469 CTCCAGCTTCTTCCTCGGC 60.153 63.158 0.00 0.00 0.00 5.54
1048 1179 1.515020 CCGTCTCCAGCTTCTCCAG 59.485 63.158 0.00 0.00 0.00 3.86
1120 1251 1.078759 GTGGCGATCTTGGTGTCGAG 61.079 60.000 0.00 0.00 40.11 4.04
1123 1254 2.100631 CGGTGGCGATCTTGGTGTC 61.101 63.158 0.00 0.00 0.00 3.67
1124 1255 2.047274 CGGTGGCGATCTTGGTGT 60.047 61.111 0.00 0.00 0.00 4.16
1125 1256 3.499737 GCGGTGGCGATCTTGGTG 61.500 66.667 0.00 0.00 0.00 4.17
1146 1277 1.140589 CTCCAGGCAGACGTAGCAG 59.859 63.158 13.63 6.11 0.00 4.24
1194 1325 1.683385 CTGTAGATGTCGATGGGCTCA 59.317 52.381 0.00 0.00 0.00 4.26
1356 1490 1.724582 GCACCCACGGATTGCCATAC 61.725 60.000 0.00 0.00 0.00 2.39
1357 1491 1.453015 GCACCCACGGATTGCCATA 60.453 57.895 0.00 0.00 0.00 2.74
1358 1492 2.755469 GCACCCACGGATTGCCAT 60.755 61.111 0.00 0.00 0.00 4.40
1360 1494 3.443045 CTGCACCCACGGATTGCC 61.443 66.667 7.06 0.00 35.26 4.52
1361 1495 4.120331 GCTGCACCCACGGATTGC 62.120 66.667 0.00 3.38 36.76 3.56
1362 1496 2.672651 TGCTGCACCCACGGATTG 60.673 61.111 0.00 0.00 0.00 2.67
1368 1504 0.527565 CCATTAACTGCTGCACCCAC 59.472 55.000 0.00 0.00 0.00 4.61
1374 1510 2.279741 TCGATCACCATTAACTGCTGC 58.720 47.619 0.00 0.00 0.00 5.25
1377 1513 3.466836 TGGATCGATCACCATTAACTGC 58.533 45.455 25.93 5.45 0.00 4.40
1380 1516 5.300752 AGACATGGATCGATCACCATTAAC 58.699 41.667 25.93 14.03 43.30 2.01
1400 1540 3.502191 TTTCAACTGTGCAACCAAGAC 57.498 42.857 0.00 0.00 34.36 3.01
1415 1557 5.636965 CCATACATTTGCCACGAAATTTCAA 59.363 36.000 17.99 4.14 0.00 2.69
1475 1617 5.631481 GCAGGGACATTTCTTATTACTGGGA 60.631 44.000 0.00 0.00 0.00 4.37
1491 1633 0.250124 CGTACTGGTTTGCAGGGACA 60.250 55.000 0.00 0.00 0.00 4.02
1537 1702 9.996554 TTCGACAGACATAACATTCCATTATAT 57.003 29.630 0.00 0.00 0.00 0.86
1538 1703 9.256477 GTTCGACAGACATAACATTCCATTATA 57.744 33.333 0.00 0.00 0.00 0.98
1539 1704 7.987458 AGTTCGACAGACATAACATTCCATTAT 59.013 33.333 0.00 0.00 0.00 1.28
1540 1705 7.327975 AGTTCGACAGACATAACATTCCATTA 58.672 34.615 0.00 0.00 0.00 1.90
1541 1706 6.173339 AGTTCGACAGACATAACATTCCATT 58.827 36.000 0.00 0.00 0.00 3.16
1542 1707 5.734720 AGTTCGACAGACATAACATTCCAT 58.265 37.500 0.00 0.00 0.00 3.41
1543 1708 5.147330 AGTTCGACAGACATAACATTCCA 57.853 39.130 0.00 0.00 0.00 3.53
1544 1709 6.035758 GGTTAGTTCGACAGACATAACATTCC 59.964 42.308 0.00 0.00 32.96 3.01
1545 1710 6.812160 AGGTTAGTTCGACAGACATAACATTC 59.188 38.462 0.00 0.00 32.96 2.67
1546 1711 6.698380 AGGTTAGTTCGACAGACATAACATT 58.302 36.000 0.00 0.00 32.96 2.71
1547 1712 6.282199 AGGTTAGTTCGACAGACATAACAT 57.718 37.500 0.00 0.00 32.96 2.71
1640 1989 3.909662 GCGATGTGCACCCTCAAT 58.090 55.556 15.69 0.00 45.45 2.57
1649 1998 0.391661 TGAAGGAAGAGGCGATGTGC 60.392 55.000 0.00 0.00 45.38 4.57
1650 1999 1.066573 ACTGAAGGAAGAGGCGATGTG 60.067 52.381 0.00 0.00 0.00 3.21
1651 2000 1.270907 ACTGAAGGAAGAGGCGATGT 58.729 50.000 0.00 0.00 0.00 3.06
1652 2001 2.005451 CAACTGAAGGAAGAGGCGATG 58.995 52.381 0.00 0.00 0.00 3.84
1653 2002 1.902508 TCAACTGAAGGAAGAGGCGAT 59.097 47.619 0.00 0.00 0.00 4.58
1654 2003 1.338107 TCAACTGAAGGAAGAGGCGA 58.662 50.000 0.00 0.00 0.00 5.54
1655 2004 2.005451 CATCAACTGAAGGAAGAGGCG 58.995 52.381 0.00 0.00 0.00 5.52
1656 2005 3.064900 ACATCAACTGAAGGAAGAGGC 57.935 47.619 0.00 0.00 0.00 4.70
1657 2006 5.152623 TGTACATCAACTGAAGGAAGAGG 57.847 43.478 0.00 0.00 0.00 3.69
1658 2007 7.010923 GCTATTGTACATCAACTGAAGGAAGAG 59.989 40.741 0.00 0.00 38.97 2.85
1659 2008 6.818644 GCTATTGTACATCAACTGAAGGAAGA 59.181 38.462 0.00 0.00 38.97 2.87
1660 2009 6.595326 TGCTATTGTACATCAACTGAAGGAAG 59.405 38.462 0.00 0.00 38.97 3.46
1661 2010 6.472016 TGCTATTGTACATCAACTGAAGGAA 58.528 36.000 0.00 0.00 38.97 3.36
1662 2011 6.048732 TGCTATTGTACATCAACTGAAGGA 57.951 37.500 0.00 0.00 38.97 3.36
1663 2012 6.932356 ATGCTATTGTACATCAACTGAAGG 57.068 37.500 0.00 0.00 38.97 3.46
1664 2013 7.755591 ACAATGCTATTGTACATCAACTGAAG 58.244 34.615 11.30 0.00 38.97 3.02
1671 2020 5.064579 CCACGAACAATGCTATTGTACATCA 59.935 40.000 12.78 0.00 31.50 3.07
1685 2034 2.513753 TCCAAATGAGCCACGAACAAT 58.486 42.857 0.00 0.00 0.00 2.71
1693 2042 3.011144 TCCCTAACAATCCAAATGAGCCA 59.989 43.478 0.00 0.00 0.00 4.75
1696 2045 3.633986 GCCTCCCTAACAATCCAAATGAG 59.366 47.826 0.00 0.00 0.00 2.90
1708 2057 1.630878 CCTATCCATGGCCTCCCTAAC 59.369 57.143 6.96 0.00 0.00 2.34
1709 2058 2.044793 CCTATCCATGGCCTCCCTAA 57.955 55.000 6.96 0.00 0.00 2.69
1710 2059 0.547712 GCCTATCCATGGCCTCCCTA 60.548 60.000 6.96 0.00 44.32 3.53
1711 2060 1.849823 GCCTATCCATGGCCTCCCT 60.850 63.158 6.96 0.00 44.32 4.20
1712 2061 2.759795 GCCTATCCATGGCCTCCC 59.240 66.667 6.96 0.00 44.32 4.30
1725 2074 5.762825 AACACGATCTTAAGATACGCCTA 57.237 39.130 24.57 0.00 34.37 3.93
1727 2076 6.254157 TGTTTAACACGATCTTAAGATACGCC 59.746 38.462 24.57 12.14 34.37 5.68
1741 2090 7.292292 CGGATCAACTATTTTGTTTAACACGA 58.708 34.615 0.00 0.00 0.00 4.35
1742 2091 6.032042 GCGGATCAACTATTTTGTTTAACACG 59.968 38.462 0.00 0.00 0.00 4.49
1744 2093 6.081049 CGCGGATCAACTATTTTGTTTAACA 58.919 36.000 0.00 0.00 0.00 2.41
1746 2095 5.090083 GCGCGGATCAACTATTTTGTTTAA 58.910 37.500 8.83 0.00 0.00 1.52
1752 2101 1.745232 TGGCGCGGATCAACTATTTT 58.255 45.000 8.83 0.00 0.00 1.82
1761 2115 2.046892 ATAGGCATGGCGCGGATC 60.047 61.111 14.30 0.00 43.84 3.36
1765 2119 2.179547 TTGTCATAGGCATGGCGCG 61.180 57.895 14.30 0.00 39.79 6.86
1781 2135 5.256474 ACTGTCCTGATTTTCCCTATGTTG 58.744 41.667 0.00 0.00 0.00 3.33
1809 2163 8.480643 ACACTGCTACTCATTAATAAGTCAAC 57.519 34.615 0.00 0.00 0.00 3.18
1823 2177 1.215647 CACCCCGACACTGCTACTC 59.784 63.158 0.00 0.00 0.00 2.59
1836 2190 3.525800 AATTGGCCTATGATACACCCC 57.474 47.619 3.32 0.00 0.00 4.95
1848 2202 9.822185 CTTTTGCTAATATTTCTAAATTGGCCT 57.178 29.630 3.32 0.00 38.41 5.19
1866 2220 2.032634 CGCACGGGCTCTTTTGCTA 61.033 57.895 8.62 0.00 38.10 3.49
1867 2221 3.357079 CGCACGGGCTCTTTTGCT 61.357 61.111 8.62 0.00 38.10 3.91
1868 2222 3.194272 AACGCACGGGCTCTTTTGC 62.194 57.895 8.62 0.00 38.10 3.68
1869 2223 1.370414 CAACGCACGGGCTCTTTTG 60.370 57.895 8.62 1.62 38.10 2.44
1870 2224 3.030652 CAACGCACGGGCTCTTTT 58.969 55.556 8.62 0.00 38.10 2.27
1871 2225 3.660111 GCAACGCACGGGCTCTTT 61.660 61.111 8.62 0.00 38.10 2.52
1872 2226 4.927782 TGCAACGCACGGGCTCTT 62.928 61.111 8.62 0.00 38.10 2.85
1873 2227 4.927782 TTGCAACGCACGGGCTCT 62.928 61.111 8.62 0.00 38.71 4.09
1874 2228 4.683334 GTTGCAACGCACGGGCTC 62.683 66.667 14.90 0.00 38.71 4.70
1884 2238 1.673920 TGTTTTCTCTCCCGTTGCAAC 59.326 47.619 19.89 19.89 0.00 4.17
1885 2239 2.045561 TGTTTTCTCTCCCGTTGCAA 57.954 45.000 0.00 0.00 0.00 4.08
1886 2240 2.270352 ATGTTTTCTCTCCCGTTGCA 57.730 45.000 0.00 0.00 0.00 4.08
1887 2241 3.424433 CGTTATGTTTTCTCTCCCGTTGC 60.424 47.826 0.00 0.00 0.00 4.17
1888 2242 3.424433 GCGTTATGTTTTCTCTCCCGTTG 60.424 47.826 0.00 0.00 0.00 4.10
1889 2243 2.740447 GCGTTATGTTTTCTCTCCCGTT 59.260 45.455 0.00 0.00 0.00 4.44
1890 2244 2.289195 TGCGTTATGTTTTCTCTCCCGT 60.289 45.455 0.00 0.00 0.00 5.28
1891 2245 2.093783 GTGCGTTATGTTTTCTCTCCCG 59.906 50.000 0.00 0.00 0.00 5.14
1892 2246 3.071479 TGTGCGTTATGTTTTCTCTCCC 58.929 45.455 0.00 0.00 0.00 4.30
1893 2247 3.746492 AGTGTGCGTTATGTTTTCTCTCC 59.254 43.478 0.00 0.00 0.00 3.71
1894 2248 4.686554 AGAGTGTGCGTTATGTTTTCTCTC 59.313 41.667 0.00 0.00 0.00 3.20
1895 2249 4.632153 AGAGTGTGCGTTATGTTTTCTCT 58.368 39.130 0.00 0.00 0.00 3.10
1896 2250 4.992381 AGAGTGTGCGTTATGTTTTCTC 57.008 40.909 0.00 0.00 0.00 2.87
1897 2251 6.482308 AGTTAAGAGTGTGCGTTATGTTTTCT 59.518 34.615 0.00 0.00 0.00 2.52
1898 2252 6.656003 AGTTAAGAGTGTGCGTTATGTTTTC 58.344 36.000 0.00 0.00 0.00 2.29
1899 2253 6.259167 TGAGTTAAGAGTGTGCGTTATGTTTT 59.741 34.615 0.00 0.00 0.00 2.43
1900 2254 5.756347 TGAGTTAAGAGTGTGCGTTATGTTT 59.244 36.000 0.00 0.00 0.00 2.83
1901 2255 5.294356 TGAGTTAAGAGTGTGCGTTATGTT 58.706 37.500 0.00 0.00 0.00 2.71
1902 2256 4.878439 TGAGTTAAGAGTGTGCGTTATGT 58.122 39.130 0.00 0.00 0.00 2.29
1903 2257 5.176774 TGTTGAGTTAAGAGTGTGCGTTATG 59.823 40.000 0.00 0.00 0.00 1.90
1904 2258 5.294356 TGTTGAGTTAAGAGTGTGCGTTAT 58.706 37.500 0.00 0.00 0.00 1.89
1905 2259 4.684877 TGTTGAGTTAAGAGTGTGCGTTA 58.315 39.130 0.00 0.00 0.00 3.18
1906 2260 3.527533 TGTTGAGTTAAGAGTGTGCGTT 58.472 40.909 0.00 0.00 0.00 4.84
1907 2261 3.173668 TGTTGAGTTAAGAGTGTGCGT 57.826 42.857 0.00 0.00 0.00 5.24
1908 2262 3.303132 GGTTGTTGAGTTAAGAGTGTGCG 60.303 47.826 0.00 0.00 0.00 5.34
1909 2263 3.625764 TGGTTGTTGAGTTAAGAGTGTGC 59.374 43.478 0.00 0.00 0.00 4.57
1910 2264 5.527214 TGATGGTTGTTGAGTTAAGAGTGTG 59.473 40.000 0.00 0.00 0.00 3.82
1911 2265 5.527582 GTGATGGTTGTTGAGTTAAGAGTGT 59.472 40.000 0.00 0.00 0.00 3.55
1912 2266 5.760253 AGTGATGGTTGTTGAGTTAAGAGTG 59.240 40.000 0.00 0.00 0.00 3.51
1913 2267 5.930135 AGTGATGGTTGTTGAGTTAAGAGT 58.070 37.500 0.00 0.00 0.00 3.24
1914 2268 5.991606 TGAGTGATGGTTGTTGAGTTAAGAG 59.008 40.000 0.00 0.00 0.00 2.85
1915 2269 5.924356 TGAGTGATGGTTGTTGAGTTAAGA 58.076 37.500 0.00 0.00 0.00 2.10
1916 2270 6.483307 TCTTGAGTGATGGTTGTTGAGTTAAG 59.517 38.462 0.00 0.00 0.00 1.85
1917 2271 6.260050 GTCTTGAGTGATGGTTGTTGAGTTAA 59.740 38.462 0.00 0.00 0.00 2.01
1918 2272 5.758296 GTCTTGAGTGATGGTTGTTGAGTTA 59.242 40.000 0.00 0.00 0.00 2.24
1919 2273 4.576463 GTCTTGAGTGATGGTTGTTGAGTT 59.424 41.667 0.00 0.00 0.00 3.01
1920 2274 4.130118 GTCTTGAGTGATGGTTGTTGAGT 58.870 43.478 0.00 0.00 0.00 3.41
1921 2275 3.499918 GGTCTTGAGTGATGGTTGTTGAG 59.500 47.826 0.00 0.00 0.00 3.02
1922 2276 3.118075 TGGTCTTGAGTGATGGTTGTTGA 60.118 43.478 0.00 0.00 0.00 3.18
1923 2277 3.213506 TGGTCTTGAGTGATGGTTGTTG 58.786 45.455 0.00 0.00 0.00 3.33
1924 2278 3.576078 TGGTCTTGAGTGATGGTTGTT 57.424 42.857 0.00 0.00 0.00 2.83
1925 2279 3.795688 ATGGTCTTGAGTGATGGTTGT 57.204 42.857 0.00 0.00 0.00 3.32
1926 2280 6.484643 CCTATTATGGTCTTGAGTGATGGTTG 59.515 42.308 0.00 0.00 0.00 3.77
1927 2281 6.158695 ACCTATTATGGTCTTGAGTGATGGTT 59.841 38.462 0.00 0.00 34.86 3.67
1928 2282 5.667626 ACCTATTATGGTCTTGAGTGATGGT 59.332 40.000 0.00 0.00 34.86 3.55
1929 2283 6.179906 ACCTATTATGGTCTTGAGTGATGG 57.820 41.667 0.00 0.00 34.86 3.51
1946 2300 8.190784 CGCAAAAATAAAGAAGATGGACCTATT 58.809 33.333 0.00 0.00 0.00 1.73
1947 2301 7.556275 TCGCAAAAATAAAGAAGATGGACCTAT 59.444 33.333 0.00 0.00 0.00 2.57
1948 2302 6.882140 TCGCAAAAATAAAGAAGATGGACCTA 59.118 34.615 0.00 0.00 0.00 3.08
1949 2303 5.710099 TCGCAAAAATAAAGAAGATGGACCT 59.290 36.000 0.00 0.00 0.00 3.85
1950 2304 5.949735 TCGCAAAAATAAAGAAGATGGACC 58.050 37.500 0.00 0.00 0.00 4.46
1951 2305 6.030228 CCTCGCAAAAATAAAGAAGATGGAC 58.970 40.000 0.00 0.00 0.00 4.02
1952 2306 5.393027 GCCTCGCAAAAATAAAGAAGATGGA 60.393 40.000 0.00 0.00 0.00 3.41
1953 2307 4.800471 GCCTCGCAAAAATAAAGAAGATGG 59.200 41.667 0.00 0.00 0.00 3.51
1954 2308 5.401550 TGCCTCGCAAAAATAAAGAAGATG 58.598 37.500 0.00 0.00 34.76 2.90
1955 2309 5.643379 TGCCTCGCAAAAATAAAGAAGAT 57.357 34.783 0.00 0.00 34.76 2.40
1956 2310 5.182950 TGATGCCTCGCAAAAATAAAGAAGA 59.817 36.000 0.00 0.00 43.62 2.87
1957 2311 5.401550 TGATGCCTCGCAAAAATAAAGAAG 58.598 37.500 0.00 0.00 43.62 2.85
1958 2312 5.384063 TGATGCCTCGCAAAAATAAAGAA 57.616 34.783 0.00 0.00 43.62 2.52
1959 2313 5.581126 ATGATGCCTCGCAAAAATAAAGA 57.419 34.783 0.00 0.00 43.62 2.52
1960 2314 7.935338 AATATGATGCCTCGCAAAAATAAAG 57.065 32.000 0.00 0.00 43.62 1.85
1961 2315 7.763528 ACAAATATGATGCCTCGCAAAAATAAA 59.236 29.630 0.00 0.00 43.62 1.40
1962 2316 7.222417 CACAAATATGATGCCTCGCAAAAATAA 59.778 33.333 0.00 0.00 43.62 1.40
1963 2317 6.696583 CACAAATATGATGCCTCGCAAAAATA 59.303 34.615 0.00 0.00 43.62 1.40
1964 2318 5.521010 CACAAATATGATGCCTCGCAAAAAT 59.479 36.000 0.00 0.00 43.62 1.82
1965 2319 4.863689 CACAAATATGATGCCTCGCAAAAA 59.136 37.500 0.00 0.00 43.62 1.94
1966 2320 4.082300 ACACAAATATGATGCCTCGCAAAA 60.082 37.500 0.00 0.00 43.62 2.44
1967 2321 3.443329 ACACAAATATGATGCCTCGCAAA 59.557 39.130 0.00 0.00 43.62 3.68
1968 2322 3.016031 ACACAAATATGATGCCTCGCAA 58.984 40.909 0.00 0.00 43.62 4.85
1969 2323 2.642427 ACACAAATATGATGCCTCGCA 58.358 42.857 0.00 0.00 44.86 5.10
1970 2324 3.365832 CAACACAAATATGATGCCTCGC 58.634 45.455 0.00 0.00 0.00 5.03
1971 2325 3.365832 GCAACACAAATATGATGCCTCG 58.634 45.455 0.00 0.00 32.22 4.63
1972 2326 3.709987 GGCAACACAAATATGATGCCTC 58.290 45.455 17.01 0.00 43.92 4.70
1973 2327 2.099592 CGGCAACACAAATATGATGCCT 59.900 45.455 20.40 0.00 44.49 4.75
1974 2328 2.462889 CGGCAACACAAATATGATGCC 58.537 47.619 14.96 14.96 43.88 4.40
1975 2329 1.854126 GCGGCAACACAAATATGATGC 59.146 47.619 0.00 0.00 35.20 3.91
1976 2330 3.425577 AGCGGCAACACAAATATGATG 57.574 42.857 1.45 0.00 0.00 3.07
1977 2331 5.278463 GGATAAGCGGCAACACAAATATGAT 60.278 40.000 1.45 0.00 0.00 2.45
1978 2332 4.036262 GGATAAGCGGCAACACAAATATGA 59.964 41.667 1.45 0.00 0.00 2.15
1979 2333 4.036734 AGGATAAGCGGCAACACAAATATG 59.963 41.667 1.45 0.00 0.00 1.78
1980 2334 4.207165 AGGATAAGCGGCAACACAAATAT 58.793 39.130 1.45 0.00 0.00 1.28
1981 2335 3.616219 AGGATAAGCGGCAACACAAATA 58.384 40.909 1.45 0.00 0.00 1.40
1982 2336 2.423538 GAGGATAAGCGGCAACACAAAT 59.576 45.455 1.45 0.00 0.00 2.32
1983 2337 1.810151 GAGGATAAGCGGCAACACAAA 59.190 47.619 1.45 0.00 0.00 2.83
1984 2338 1.448985 GAGGATAAGCGGCAACACAA 58.551 50.000 1.45 0.00 0.00 3.33
1985 2339 0.392461 GGAGGATAAGCGGCAACACA 60.392 55.000 1.45 0.00 0.00 3.72
1986 2340 0.107654 AGGAGGATAAGCGGCAACAC 60.108 55.000 1.45 0.00 0.00 3.32
1987 2341 0.618458 AAGGAGGATAAGCGGCAACA 59.382 50.000 1.45 0.00 0.00 3.33
1988 2342 1.134371 AGAAGGAGGATAAGCGGCAAC 60.134 52.381 1.45 0.00 0.00 4.17
1989 2343 1.139058 GAGAAGGAGGATAAGCGGCAA 59.861 52.381 1.45 0.00 0.00 4.52
1990 2344 0.753262 GAGAAGGAGGATAAGCGGCA 59.247 55.000 1.45 0.00 0.00 5.69
1991 2345 0.753262 TGAGAAGGAGGATAAGCGGC 59.247 55.000 0.00 0.00 0.00 6.53
1992 2346 1.069358 GGTGAGAAGGAGGATAAGCGG 59.931 57.143 0.00 0.00 0.00 5.52
1993 2347 1.069358 GGGTGAGAAGGAGGATAAGCG 59.931 57.143 0.00 0.00 0.00 4.68
1994 2348 2.367241 GAGGGTGAGAAGGAGGATAAGC 59.633 54.545 0.00 0.00 0.00 3.09
1995 2349 2.625790 CGAGGGTGAGAAGGAGGATAAG 59.374 54.545 0.00 0.00 0.00 1.73
1996 2350 2.024273 ACGAGGGTGAGAAGGAGGATAA 60.024 50.000 0.00 0.00 0.00 1.75
1997 2351 1.569548 ACGAGGGTGAGAAGGAGGATA 59.430 52.381 0.00 0.00 0.00 2.59
1998 2352 0.336737 ACGAGGGTGAGAAGGAGGAT 59.663 55.000 0.00 0.00 0.00 3.24
1999 2353 0.323542 GACGAGGGTGAGAAGGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
2000 2354 1.658686 CGACGAGGGTGAGAAGGAGG 61.659 65.000 0.00 0.00 0.00 4.30
2001 2355 1.658686 CCGACGAGGGTGAGAAGGAG 61.659 65.000 0.00 0.00 35.97 3.69
2002 2356 1.677966 CCGACGAGGGTGAGAAGGA 60.678 63.158 0.00 0.00 35.97 3.36
2003 2357 2.885861 CCGACGAGGGTGAGAAGG 59.114 66.667 0.00 0.00 35.97 3.46
2004 2358 2.182030 GCCGACGAGGGTGAGAAG 59.818 66.667 0.00 0.00 41.48 2.85
2005 2359 3.744719 CGCCGACGAGGGTGAGAA 61.745 66.667 0.00 0.00 43.93 2.87
2006 2360 4.710167 TCGCCGACGAGGGTGAGA 62.710 66.667 8.34 0.00 45.12 3.27
2020 2374 1.375908 TGAACACTGAGGCCATCGC 60.376 57.895 5.01 0.00 0.00 4.58
2021 2375 0.320683 TGTGAACACTGAGGCCATCG 60.321 55.000 5.01 0.00 0.00 3.84
2022 2376 1.160137 GTGTGAACACTGAGGCCATC 58.840 55.000 5.01 0.00 43.25 3.51
2023 2377 0.473755 TGTGTGAACACTGAGGCCAT 59.526 50.000 14.28 0.00 46.55 4.40
2024 2378 0.254462 TTGTGTGAACACTGAGGCCA 59.746 50.000 14.28 0.00 46.55 5.36
2025 2379 1.388547 TTTGTGTGAACACTGAGGCC 58.611 50.000 14.28 0.00 46.55 5.19
2026 2380 2.163412 TGTTTTGTGTGAACACTGAGGC 59.837 45.455 14.28 2.93 46.55 4.70
2027 2381 4.165779 GTTGTTTTGTGTGAACACTGAGG 58.834 43.478 14.28 0.00 46.55 3.86
2028 2382 4.793071 TGTTGTTTTGTGTGAACACTGAG 58.207 39.130 14.28 0.00 46.55 3.35
2029 2383 4.837896 TGTTGTTTTGTGTGAACACTGA 57.162 36.364 14.28 1.29 46.55 3.41
2030 2384 5.896922 TTTGTTGTTTTGTGTGAACACTG 57.103 34.783 14.28 0.00 46.55 3.66
2031 2385 6.910536 TTTTTGTTGTTTTGTGTGAACACT 57.089 29.167 14.28 0.00 46.55 3.55
2051 2405 9.187455 GATTAACCATATTCAACACACGTTTTT 57.813 29.630 0.00 0.00 31.13 1.94
2052 2406 7.810759 GGATTAACCATATTCAACACACGTTTT 59.189 33.333 0.00 0.00 38.79 2.43
2053 2407 7.175990 AGGATTAACCATATTCAACACACGTTT 59.824 33.333 0.00 0.00 42.04 3.60
2054 2408 6.657541 AGGATTAACCATATTCAACACACGTT 59.342 34.615 0.00 0.00 42.04 3.99
2055 2409 6.177610 AGGATTAACCATATTCAACACACGT 58.822 36.000 0.00 0.00 42.04 4.49
2056 2410 6.677781 AGGATTAACCATATTCAACACACG 57.322 37.500 0.00 0.00 42.04 4.49
2057 2411 8.621286 CCTTAGGATTAACCATATTCAACACAC 58.379 37.037 0.00 0.00 42.04 3.82
2058 2412 7.284489 GCCTTAGGATTAACCATATTCAACACA 59.716 37.037 0.69 0.00 42.04 3.72
2059 2413 7.519970 CGCCTTAGGATTAACCATATTCAACAC 60.520 40.741 0.69 0.00 42.04 3.32
2060 2414 6.485313 CGCCTTAGGATTAACCATATTCAACA 59.515 38.462 0.69 0.00 42.04 3.33
2061 2415 6.485648 ACGCCTTAGGATTAACCATATTCAAC 59.514 38.462 0.69 0.00 42.04 3.18
2062 2416 6.597562 ACGCCTTAGGATTAACCATATTCAA 58.402 36.000 0.69 0.00 42.04 2.69
2063 2417 6.042781 AGACGCCTTAGGATTAACCATATTCA 59.957 38.462 0.69 0.00 42.04 2.57
2064 2418 6.465084 AGACGCCTTAGGATTAACCATATTC 58.535 40.000 0.69 0.00 42.04 1.75
2065 2419 6.270231 AGAGACGCCTTAGGATTAACCATATT 59.730 38.462 0.69 0.00 42.04 1.28
2066 2420 5.780793 AGAGACGCCTTAGGATTAACCATAT 59.219 40.000 0.69 0.00 42.04 1.78
2067 2421 5.145564 AGAGACGCCTTAGGATTAACCATA 58.854 41.667 0.69 0.00 42.04 2.74
2068 2422 3.967987 AGAGACGCCTTAGGATTAACCAT 59.032 43.478 0.69 0.00 42.04 3.55
2069 2423 3.371965 AGAGACGCCTTAGGATTAACCA 58.628 45.455 0.69 0.00 42.04 3.67
2070 2424 3.637694 AGAGAGACGCCTTAGGATTAACC 59.362 47.826 0.69 0.00 39.35 2.85
2071 2425 4.261698 GGAGAGAGACGCCTTAGGATTAAC 60.262 50.000 0.69 0.00 35.57 2.01
2072 2426 3.890147 GGAGAGAGACGCCTTAGGATTAA 59.110 47.826 0.69 0.00 35.57 1.40
2073 2427 3.488363 GGAGAGAGACGCCTTAGGATTA 58.512 50.000 0.69 0.00 35.57 1.75
2074 2428 2.312390 GGAGAGAGACGCCTTAGGATT 58.688 52.381 0.69 0.00 35.57 3.01
2075 2429 1.479757 GGGAGAGAGACGCCTTAGGAT 60.480 57.143 0.69 0.00 38.52 3.24
2076 2430 0.106619 GGGAGAGAGACGCCTTAGGA 60.107 60.000 0.69 0.00 38.52 2.94
2077 2431 0.106419 AGGGAGAGAGACGCCTTAGG 60.106 60.000 0.00 0.00 38.52 2.69
2078 2432 1.133915 AGAGGGAGAGAGACGCCTTAG 60.134 57.143 0.00 0.00 38.52 2.18
2079 2433 0.920438 AGAGGGAGAGAGACGCCTTA 59.080 55.000 0.00 0.00 38.52 2.69
2080 2434 0.395173 GAGAGGGAGAGAGACGCCTT 60.395 60.000 0.00 0.00 38.52 4.35
2081 2435 1.226262 GAGAGGGAGAGAGACGCCT 59.774 63.158 0.00 0.00 38.52 5.52
2082 2436 1.826487 GGAGAGGGAGAGAGACGCC 60.826 68.421 0.00 0.00 37.74 5.68
2083 2437 1.826487 GGGAGAGGGAGAGAGACGC 60.826 68.421 0.00 0.00 0.00 5.19
2084 2438 0.179029 GAGGGAGAGGGAGAGAGACG 60.179 65.000 0.00 0.00 0.00 4.18
2085 2439 1.143073 GAGAGGGAGAGGGAGAGAGAC 59.857 61.905 0.00 0.00 0.00 3.36
2086 2440 1.010793 AGAGAGGGAGAGGGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
2087 2441 1.421646 GAGAGAGGGAGAGGGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
2088 2442 1.010793 AGAGAGAGGGAGAGGGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
2089 2443 1.421646 GAGAGAGAGGGAGAGGGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
2090 2444 1.010793 AGAGAGAGAGGGAGAGGGAGA 59.989 57.143 0.00 0.00 0.00 3.71
2091 2445 1.421646 GAGAGAGAGAGGGAGAGGGAG 59.578 61.905 0.00 0.00 0.00 4.30
2092 2446 1.010793 AGAGAGAGAGAGGGAGAGGGA 59.989 57.143 0.00 0.00 0.00 4.20
2093 2447 1.421646 GAGAGAGAGAGAGGGAGAGGG 59.578 61.905 0.00 0.00 0.00 4.30
2094 2448 2.370189 GAGAGAGAGAGAGAGGGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
2095 2449 3.312890 AGAGAGAGAGAGAGAGGGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
2096 2450 3.051803 AGAGAGAGAGAGAGAGAGGGAGA 60.052 52.174 0.00 0.00 0.00 3.71
2097 2451 3.312890 AGAGAGAGAGAGAGAGAGGGAG 58.687 54.545 0.00 0.00 0.00 4.30
2098 2452 3.051803 AGAGAGAGAGAGAGAGAGAGGGA 60.052 52.174 0.00 0.00 0.00 4.20
2099 2453 3.070734 CAGAGAGAGAGAGAGAGAGAGGG 59.929 56.522 0.00 0.00 0.00 4.30
2100 2454 3.494048 GCAGAGAGAGAGAGAGAGAGAGG 60.494 56.522 0.00 0.00 0.00 3.69
2101 2455 3.387374 AGCAGAGAGAGAGAGAGAGAGAG 59.613 52.174 0.00 0.00 0.00 3.20
2102 2456 3.378512 AGCAGAGAGAGAGAGAGAGAGA 58.621 50.000 0.00 0.00 0.00 3.10
2103 2457 3.726607 GAGCAGAGAGAGAGAGAGAGAG 58.273 54.545 0.00 0.00 0.00 3.20
2104 2458 2.101415 CGAGCAGAGAGAGAGAGAGAGA 59.899 54.545 0.00 0.00 0.00 3.10
2105 2459 2.477825 CGAGCAGAGAGAGAGAGAGAG 58.522 57.143 0.00 0.00 0.00 3.20
2106 2460 1.473257 GCGAGCAGAGAGAGAGAGAGA 60.473 57.143 0.00 0.00 0.00 3.10
2107 2461 0.940126 GCGAGCAGAGAGAGAGAGAG 59.060 60.000 0.00 0.00 0.00 3.20
2108 2462 0.541392 AGCGAGCAGAGAGAGAGAGA 59.459 55.000 0.00 0.00 0.00 3.10
2109 2463 1.382522 AAGCGAGCAGAGAGAGAGAG 58.617 55.000 0.00 0.00 0.00 3.20
2110 2464 1.742831 GAAAGCGAGCAGAGAGAGAGA 59.257 52.381 0.00 0.00 0.00 3.10
2111 2465 1.745087 AGAAAGCGAGCAGAGAGAGAG 59.255 52.381 0.00 0.00 0.00 3.20
2112 2466 1.742831 GAGAAAGCGAGCAGAGAGAGA 59.257 52.381 0.00 0.00 0.00 3.10
2113 2467 1.745087 AGAGAAAGCGAGCAGAGAGAG 59.255 52.381 0.00 0.00 0.00 3.20
2114 2468 1.742831 GAGAGAAAGCGAGCAGAGAGA 59.257 52.381 0.00 0.00 0.00 3.10
2115 2469 1.472082 TGAGAGAAAGCGAGCAGAGAG 59.528 52.381 0.00 0.00 0.00 3.20
2116 2470 1.201181 GTGAGAGAAAGCGAGCAGAGA 59.799 52.381 0.00 0.00 0.00 3.10
2117 2471 1.202114 AGTGAGAGAAAGCGAGCAGAG 59.798 52.381 0.00 0.00 0.00 3.35
2118 2472 1.201181 GAGTGAGAGAAAGCGAGCAGA 59.799 52.381 0.00 0.00 0.00 4.26
2119 2473 1.202114 AGAGTGAGAGAAAGCGAGCAG 59.798 52.381 0.00 0.00 0.00 4.24
2120 2474 1.201181 GAGAGTGAGAGAAAGCGAGCA 59.799 52.381 0.00 0.00 0.00 4.26
2121 2475 1.793714 CGAGAGTGAGAGAAAGCGAGC 60.794 57.143 0.00 0.00 0.00 5.03
2122 2476 1.793714 GCGAGAGTGAGAGAAAGCGAG 60.794 57.143 0.00 0.00 0.00 5.03
2123 2477 0.169230 GCGAGAGTGAGAGAAAGCGA 59.831 55.000 0.00 0.00 0.00 4.93
2124 2478 1.131037 CGCGAGAGTGAGAGAAAGCG 61.131 60.000 0.00 0.00 46.66 4.68
2125 2479 2.647784 CGCGAGAGTGAGAGAAAGC 58.352 57.895 0.00 0.00 46.66 3.51
2138 2492 2.926200 ACAACAGATTTCTCATCGCGAG 59.074 45.455 16.66 7.11 43.80 5.03
2139 2493 2.959516 ACAACAGATTTCTCATCGCGA 58.040 42.857 13.09 13.09 0.00 5.87
2140 2494 3.729526 AACAACAGATTTCTCATCGCG 57.270 42.857 0.00 0.00 0.00 5.87
2141 2495 4.853743 GGAAAACAACAGATTTCTCATCGC 59.146 41.667 0.00 0.00 36.15 4.58
2142 2496 5.082059 CGGAAAACAACAGATTTCTCATCG 58.918 41.667 0.00 0.00 36.15 3.84
2143 2497 6.002062 ACGGAAAACAACAGATTTCTCATC 57.998 37.500 0.00 0.00 36.15 2.92
2144 2498 6.208644 CAACGGAAAACAACAGATTTCTCAT 58.791 36.000 0.00 0.00 36.15 2.90
2145 2499 5.577835 CAACGGAAAACAACAGATTTCTCA 58.422 37.500 0.00 0.00 36.15 3.27
2146 2500 4.441087 GCAACGGAAAACAACAGATTTCTC 59.559 41.667 0.00 0.00 36.15 2.87
2147 2501 4.359706 GCAACGGAAAACAACAGATTTCT 58.640 39.130 0.00 0.00 36.15 2.52
2148 2502 3.179599 CGCAACGGAAAACAACAGATTTC 59.820 43.478 0.00 0.00 35.33 2.17
2149 2503 3.112580 CGCAACGGAAAACAACAGATTT 58.887 40.909 0.00 0.00 0.00 2.17
2150 2504 2.356382 TCGCAACGGAAAACAACAGATT 59.644 40.909 0.00 0.00 0.00 2.40
2151 2505 1.944024 TCGCAACGGAAAACAACAGAT 59.056 42.857 0.00 0.00 0.00 2.90
2152 2506 1.370609 TCGCAACGGAAAACAACAGA 58.629 45.000 0.00 0.00 0.00 3.41
2153 2507 2.399396 ATCGCAACGGAAAACAACAG 57.601 45.000 0.00 0.00 0.00 3.16
2154 2508 5.804692 ATATATCGCAACGGAAAACAACA 57.195 34.783 0.00 0.00 0.00 3.33
2155 2509 6.743627 TGAAATATATCGCAACGGAAAACAAC 59.256 34.615 0.00 0.00 0.00 3.32
2156 2510 6.843208 TGAAATATATCGCAACGGAAAACAA 58.157 32.000 0.00 0.00 0.00 2.83
2157 2511 6.314152 TCTGAAATATATCGCAACGGAAAACA 59.686 34.615 0.00 0.00 0.00 2.83
2158 2512 6.711579 TCTGAAATATATCGCAACGGAAAAC 58.288 36.000 0.00 0.00 0.00 2.43
2159 2513 6.018262 CCTCTGAAATATATCGCAACGGAAAA 60.018 38.462 0.00 0.00 0.00 2.29
2160 2514 5.465390 CCTCTGAAATATATCGCAACGGAAA 59.535 40.000 0.00 0.00 0.00 3.13
2161 2515 4.988540 CCTCTGAAATATATCGCAACGGAA 59.011 41.667 0.00 0.00 0.00 4.30
2162 2516 4.038763 ACCTCTGAAATATATCGCAACGGA 59.961 41.667 0.00 0.00 0.00 4.69
2163 2517 4.307432 ACCTCTGAAATATATCGCAACGG 58.693 43.478 0.00 0.00 0.00 4.44
2164 2518 6.454318 GCATACCTCTGAAATATATCGCAACG 60.454 42.308 0.00 0.00 0.00 4.10
2165 2519 6.368791 TGCATACCTCTGAAATATATCGCAAC 59.631 38.462 0.00 0.00 0.00 4.17
2166 2520 6.368791 GTGCATACCTCTGAAATATATCGCAA 59.631 38.462 0.00 0.00 0.00 4.85
2167 2521 5.869344 GTGCATACCTCTGAAATATATCGCA 59.131 40.000 0.00 0.00 0.00 5.10
2168 2522 5.004821 CGTGCATACCTCTGAAATATATCGC 59.995 44.000 0.00 0.00 0.00 4.58
2169 2523 6.033937 CACGTGCATACCTCTGAAATATATCG 59.966 42.308 0.82 0.00 0.00 2.92
2170 2524 6.868864 ACACGTGCATACCTCTGAAATATATC 59.131 38.462 17.22 0.00 0.00 1.63
2171 2525 6.759272 ACACGTGCATACCTCTGAAATATAT 58.241 36.000 17.22 0.00 0.00 0.86
2172 2526 6.156748 ACACGTGCATACCTCTGAAATATA 57.843 37.500 17.22 0.00 0.00 0.86
2173 2527 5.023533 ACACGTGCATACCTCTGAAATAT 57.976 39.130 17.22 0.00 0.00 1.28
2174 2528 4.465632 ACACGTGCATACCTCTGAAATA 57.534 40.909 17.22 0.00 0.00 1.40
2175 2529 3.334583 ACACGTGCATACCTCTGAAAT 57.665 42.857 17.22 0.00 0.00 2.17
2176 2530 2.831685 ACACGTGCATACCTCTGAAA 57.168 45.000 17.22 0.00 0.00 2.69
2177 2531 2.823747 ACTACACGTGCATACCTCTGAA 59.176 45.455 17.22 0.00 0.00 3.02
2178 2532 2.443416 ACTACACGTGCATACCTCTGA 58.557 47.619 17.22 0.00 0.00 3.27
2179 2533 2.941453 ACTACACGTGCATACCTCTG 57.059 50.000 17.22 0.00 0.00 3.35
2180 2534 4.261072 CGATAACTACACGTGCATACCTCT 60.261 45.833 17.22 0.00 0.00 3.69
2181 2535 3.973135 CGATAACTACACGTGCATACCTC 59.027 47.826 17.22 5.60 0.00 3.85
2182 2536 3.628942 TCGATAACTACACGTGCATACCT 59.371 43.478 17.22 0.00 0.00 3.08
2183 2537 3.956233 TCGATAACTACACGTGCATACC 58.044 45.455 17.22 0.00 0.00 2.73
2184 2538 4.974275 ACATCGATAACTACACGTGCATAC 59.026 41.667 17.22 0.16 0.00 2.39
2185 2539 5.177725 ACATCGATAACTACACGTGCATA 57.822 39.130 17.22 4.04 0.00 3.14
2186 2540 4.041740 ACATCGATAACTACACGTGCAT 57.958 40.909 17.22 0.00 0.00 3.96
2187 2541 3.497297 ACATCGATAACTACACGTGCA 57.503 42.857 17.22 0.49 0.00 4.57
2188 2542 4.835199 AAACATCGATAACTACACGTGC 57.165 40.909 17.22 0.00 0.00 5.34
2189 2543 6.627690 AGAAAACATCGATAACTACACGTG 57.372 37.500 15.48 15.48 0.00 4.49
2190 2544 7.647907 AAAGAAAACATCGATAACTACACGT 57.352 32.000 0.00 0.00 0.00 4.49
2191 2545 8.928844 AAAAAGAAAACATCGATAACTACACG 57.071 30.769 0.00 0.00 0.00 4.49
2192 2546 9.037417 CGAAAAAGAAAACATCGATAACTACAC 57.963 33.333 0.00 0.00 35.65 2.90
2193 2547 8.767085 ACGAAAAAGAAAACATCGATAACTACA 58.233 29.630 0.00 0.00 37.27 2.74
2200 2554 9.104965 TCCATATACGAAAAAGAAAACATCGAT 57.895 29.630 0.00 0.00 37.27 3.59
2201 2555 8.481974 TCCATATACGAAAAAGAAAACATCGA 57.518 30.769 0.07 0.00 37.27 3.59
2212 2566 9.923143 CACTCCACTATATCCATATACGAAAAA 57.077 33.333 0.00 0.00 0.00 1.94
2213 2567 9.085645 ACACTCCACTATATCCATATACGAAAA 57.914 33.333 0.00 0.00 0.00 2.29
2214 2568 8.645814 ACACTCCACTATATCCATATACGAAA 57.354 34.615 0.00 0.00 0.00 3.46
2215 2569 8.645814 AACACTCCACTATATCCATATACGAA 57.354 34.615 0.00 0.00 0.00 3.85
2216 2570 8.645814 AAACACTCCACTATATCCATATACGA 57.354 34.615 0.00 0.00 0.00 3.43
2221 2575 9.502091 GCAAATAAACACTCCACTATATCCATA 57.498 33.333 0.00 0.00 0.00 2.74
2222 2576 7.998383 TGCAAATAAACACTCCACTATATCCAT 59.002 33.333 0.00 0.00 0.00 3.41
2223 2577 7.342581 TGCAAATAAACACTCCACTATATCCA 58.657 34.615 0.00 0.00 0.00 3.41
2224 2578 7.801716 TGCAAATAAACACTCCACTATATCC 57.198 36.000 0.00 0.00 0.00 2.59
2225 2579 9.884465 GATTGCAAATAAACACTCCACTATATC 57.116 33.333 1.71 0.00 0.00 1.63
2226 2580 8.850156 GGATTGCAAATAAACACTCCACTATAT 58.150 33.333 1.71 0.00 36.07 0.86
2227 2581 7.011950 CGGATTGCAAATAAACACTCCACTATA 59.988 37.037 1.71 0.00 35.85 1.31
2228 2582 6.183360 CGGATTGCAAATAAACACTCCACTAT 60.183 38.462 1.71 0.00 35.85 2.12
2229 2583 5.123186 CGGATTGCAAATAAACACTCCACTA 59.877 40.000 1.71 0.00 35.85 2.74
2230 2584 4.082787 CGGATTGCAAATAAACACTCCACT 60.083 41.667 1.71 0.00 35.85 4.00
2231 2585 4.165779 CGGATTGCAAATAAACACTCCAC 58.834 43.478 1.71 0.00 35.85 4.02
2232 2586 3.192422 CCGGATTGCAAATAAACACTCCA 59.808 43.478 1.71 0.00 35.85 3.86
2233 2587 3.442273 TCCGGATTGCAAATAAACACTCC 59.558 43.478 1.71 1.90 33.50 3.85
2234 2588 4.695217 TCCGGATTGCAAATAAACACTC 57.305 40.909 1.71 0.00 0.00 3.51
2235 2589 4.201910 CGATCCGGATTGCAAATAAACACT 60.202 41.667 20.22 0.00 0.00 3.55
2236 2590 4.035017 CGATCCGGATTGCAAATAAACAC 58.965 43.478 20.22 0.00 0.00 3.32
2237 2591 3.488384 GCGATCCGGATTGCAAATAAACA 60.488 43.478 40.23 1.72 45.40 2.83
2238 2592 3.042887 GCGATCCGGATTGCAAATAAAC 58.957 45.455 40.23 16.62 45.40 2.01
2239 2593 3.347958 GCGATCCGGATTGCAAATAAA 57.652 42.857 40.23 2.42 45.40 1.40
2246 2600 3.279875 GGTGGCGATCCGGATTGC 61.280 66.667 38.63 38.63 45.35 3.56
2247 2601 2.967076 CGGTGGCGATCCGGATTG 60.967 66.667 25.26 25.26 43.68 2.67
2252 2606 2.355837 CATACCGGTGGCGATCCG 60.356 66.667 19.93 8.26 46.49 4.18
2253 2607 0.179067 TTTCATACCGGTGGCGATCC 60.179 55.000 19.93 0.00 0.00 3.36
2254 2608 1.658994 TTTTCATACCGGTGGCGATC 58.341 50.000 19.93 0.00 0.00 3.69
2255 2609 2.116827 TTTTTCATACCGGTGGCGAT 57.883 45.000 19.93 0.00 0.00 4.58
2256 2610 3.627645 TTTTTCATACCGGTGGCGA 57.372 47.368 19.93 7.93 0.00 5.54
2275 2629 9.672673 ACTTATAATTTATAGCGCAAGATCCAT 57.327 29.630 11.47 0.00 43.02 3.41
2276 2630 9.502091 AACTTATAATTTATAGCGCAAGATCCA 57.498 29.630 11.47 0.00 43.02 3.41
2279 2633 9.612620 GCAAACTTATAATTTATAGCGCAAGAT 57.387 29.630 11.47 1.92 43.02 2.40
2280 2634 8.836413 AGCAAACTTATAATTTATAGCGCAAGA 58.164 29.630 11.47 0.00 43.02 3.02
2281 2635 9.450807 AAGCAAACTTATAATTTATAGCGCAAG 57.549 29.630 11.47 2.34 33.13 4.01
2282 2636 9.445786 GAAGCAAACTTATAATTTATAGCGCAA 57.554 29.630 11.47 0.00 35.82 4.85
2283 2637 8.073768 GGAAGCAAACTTATAATTTATAGCGCA 58.926 33.333 11.47 0.00 35.82 6.09
2284 2638 8.073768 TGGAAGCAAACTTATAATTTATAGCGC 58.926 33.333 0.00 0.00 35.82 5.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.