Multiple sequence alignment - TraesCS1B01G056800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G056800 chr1B 100.000 4338 0 0 1 4338 39586227 39581890 0.000000e+00 8011.0
1 TraesCS1B01G056800 chr1B 97.436 585 9 4 3588 4172 39655386 39655964 0.000000e+00 992.0
2 TraesCS1B01G056800 chr1B 92.333 613 45 1 1431 2041 39652770 39653382 0.000000e+00 870.0
3 TraesCS1B01G056800 chr1B 88.821 492 46 5 893 1379 39652263 39652750 2.890000e-166 595.0
4 TraesCS1B01G056800 chr1B 87.423 485 45 10 221 698 39651796 39652271 1.060000e-150 544.0
5 TraesCS1B01G056800 chr1B 86.705 173 13 8 61 233 39651553 39651715 2.660000e-42 183.0
6 TraesCS1B01G056800 chr1D 89.847 1891 141 24 893 2763 23440814 23438955 0.000000e+00 2381.0
7 TraesCS1B01G056800 chr1D 90.265 1171 91 12 893 2044 24120174 24121340 0.000000e+00 1509.0
8 TraesCS1B01G056800 chr1D 90.009 1141 85 13 1331 2465 23988929 23990046 0.000000e+00 1448.0
9 TraesCS1B01G056800 chr1D 83.705 718 71 21 12 698 23441508 23440806 1.700000e-178 636.0
10 TraesCS1B01G056800 chr1D 92.377 446 28 3 3567 4012 24123331 24123770 7.920000e-177 630.0
11 TraesCS1B01G056800 chr1D 86.633 591 45 17 3434 4012 23436340 23435772 1.320000e-174 623.0
12 TraesCS1B01G056800 chr1D 87.226 548 48 10 2878 3403 23437126 23436579 4.800000e-169 604.0
13 TraesCS1B01G056800 chr1D 87.968 507 42 15 2864 3357 23995983 23996483 8.090000e-162 580.0
14 TraesCS1B01G056800 chr1D 86.722 482 49 11 221 696 24119708 24120180 4.970000e-144 521.0
15 TraesCS1B01G056800 chr1D 86.918 451 46 6 893 1336 23978720 23979164 1.080000e-135 494.0
16 TraesCS1B01G056800 chr1D 98.204 167 3 0 4006 4172 24125112 24125278 4.240000e-75 292.0
17 TraesCS1B01G056800 chr1D 94.012 167 9 1 4006 4172 23998198 23998363 7.200000e-63 252.0
18 TraesCS1B01G056800 chr1D 86.636 217 16 7 20 233 24119415 24119621 1.210000e-55 228.0
19 TraesCS1B01G056800 chr1A 89.684 1900 133 33 893 2763 24766986 24768851 0.000000e+00 2364.0
20 TraesCS1B01G056800 chr1A 89.647 1758 129 26 893 2629 24570051 24568326 0.000000e+00 2189.0
21 TraesCS1B01G056800 chr1A 90.614 1172 85 14 893 2044 24938812 24939978 0.000000e+00 1531.0
22 TraesCS1B01G056800 chr1A 88.244 706 58 11 9 698 24938124 24938820 0.000000e+00 821.0
23 TraesCS1B01G056800 chr1A 85.583 652 60 14 66 698 24570679 24570043 0.000000e+00 652.0
24 TraesCS1B01G056800 chr1A 87.037 594 41 16 3434 4012 24562368 24561796 4.730000e-179 638.0
25 TraesCS1B01G056800 chr1A 86.633 591 40 17 3435 4012 24772422 24772986 6.160000e-173 617.0
26 TraesCS1B01G056800 chr1A 91.480 446 32 3 3567 4012 24941966 24942405 3.710000e-170 608.0
27 TraesCS1B01G056800 chr1A 87.226 548 48 11 2878 3403 24563154 24562607 4.800000e-169 604.0
28 TraesCS1B01G056800 chr1A 87.631 477 42 8 2864 3323 24770668 24771144 4.940000e-149 538.0
29 TraesCS1B01G056800 chr1A 86.570 484 49 10 221 698 24766521 24766994 1.790000e-143 520.0
30 TraesCS1B01G056800 chr1A 86.284 401 39 10 221 615 24760160 24760550 5.190000e-114 422.0
31 TraesCS1B01G056800 chr1A 86.250 400 40 8 221 615 24648505 24648894 1.870000e-113 420.0
32 TraesCS1B01G056800 chr1A 86.035 401 40 10 221 615 24607630 24608020 2.410000e-112 416.0
33 TraesCS1B01G056800 chr1A 86.035 401 40 10 221 615 24615102 24615492 2.410000e-112 416.0
34 TraesCS1B01G056800 chr1A 86.035 401 40 9 221 615 24728018 24728408 2.410000e-112 416.0
35 TraesCS1B01G056800 chr1A 86.035 401 40 9 221 615 24734452 24734842 2.410000e-112 416.0
36 TraesCS1B01G056800 chr1A 86.000 400 41 8 221 615 24603629 24604018 8.680000e-112 414.0
37 TraesCS1B01G056800 chr1A 85.786 401 41 10 221 615 24595745 24596135 1.120000e-110 411.0
38 TraesCS1B01G056800 chr1A 85.930 398 40 9 221 612 24740927 24741314 1.120000e-110 411.0
39 TraesCS1B01G056800 chr1A 85.750 400 42 9 221 615 24618779 24619168 4.040000e-110 409.0
40 TraesCS1B01G056800 chr1A 85.714 399 44 8 221 615 24654975 24655364 4.040000e-110 409.0
41 TraesCS1B01G056800 chr1A 94.611 167 9 0 4006 4172 24944099 24944265 4.300000e-65 259.0
42 TraesCS1B01G056800 chr1A 80.495 323 47 10 2290 2611 24940167 24940474 2.610000e-57 233.0
43 TraesCS1B01G056800 chr1A 85.714 217 18 6 20 233 24591596 24591802 2.630000e-52 217.0
44 TraesCS1B01G056800 chr1A 85.253 217 19 6 20 233 24607343 24607549 1.220000e-50 211.0
45 TraesCS1B01G056800 chr2B 100.000 196 0 0 699 894 136954595 136954400 3.190000e-96 363.0
46 TraesCS1B01G056800 chr7B 96.651 209 5 2 691 898 191247996 191247789 3.210000e-91 346.0
47 TraesCS1B01G056800 chr7B 97.990 199 4 0 695 893 197165816 197166014 3.210000e-91 346.0
48 TraesCS1B01G056800 chr7B 95.775 213 6 3 687 898 64987289 64987499 1.490000e-89 340.0
49 TraesCS1B01G056800 chr7B 95.238 210 10 0 696 905 68295537 68295328 2.500000e-87 333.0
50 TraesCS1B01G056800 chr5B 98.469 196 3 0 699 894 626383669 626383474 3.210000e-91 346.0
51 TraesCS1B01G056800 chr5B 96.226 212 5 3 692 901 638416769 638416559 1.150000e-90 344.0
52 TraesCS1B01G056800 chr5B 95.238 210 8 2 691 899 693065340 693065132 8.990000e-87 331.0
53 TraesCS1B01G056800 chr5B 95.890 146 6 0 4193 4338 526651158 526651013 2.020000e-58 237.0
54 TraesCS1B01G056800 chr5B 91.617 167 14 0 4006 4172 665810846 665811012 9.380000e-57 231.0
55 TraesCS1B01G056800 chr3B 96.172 209 8 0 693 901 839227 839435 4.150000e-90 342.0
56 TraesCS1B01G056800 chr3B 89.820 167 17 0 4006 4172 160138750 160138584 9.450000e-52 215.0
57 TraesCS1B01G056800 chr5A 91.018 167 15 0 4006 4172 656936194 656936360 4.370000e-55 226.0
58 TraesCS1B01G056800 chr3D 90.419 167 16 0 4006 4172 108571933 108571767 2.030000e-53 220.0
59 TraesCS1B01G056800 chr2D 75.966 233 51 5 2386 2615 88083312 88083082 9.860000e-22 115.0
60 TraesCS1B01G056800 chr7D 84.211 95 14 1 4195 4288 616689155 616689061 1.660000e-14 91.6
61 TraesCS1B01G056800 chr4B 84.146 82 13 0 4207 4288 667897717 667897636 3.600000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G056800 chr1B 39581890 39586227 4337 True 8011.00 8011 100.000000 1 4338 1 chr1B.!!$R1 4337
1 TraesCS1B01G056800 chr1B 39651553 39655964 4411 False 636.80 992 90.543600 61 4172 5 chr1B.!!$F1 4111
2 TraesCS1B01G056800 chr1D 23988929 23990046 1117 False 1448.00 1448 90.009000 1331 2465 1 chr1D.!!$F2 1134
3 TraesCS1B01G056800 chr1D 23435772 23441508 5736 True 1061.00 2381 86.852750 12 4012 4 chr1D.!!$R1 4000
4 TraesCS1B01G056800 chr1D 24119415 24125278 5863 False 636.00 1509 90.840800 20 4172 5 chr1D.!!$F4 4152
5 TraesCS1B01G056800 chr1D 23995983 23998363 2380 False 416.00 580 90.990000 2864 4172 2 chr1D.!!$F3 1308
6 TraesCS1B01G056800 chr1A 24568326 24570679 2353 True 1420.50 2189 87.615000 66 2629 2 chr1A.!!$R2 2563
7 TraesCS1B01G056800 chr1A 24766521 24772986 6465 False 1009.75 2364 87.629500 221 4012 4 chr1A.!!$F10 3791
8 TraesCS1B01G056800 chr1A 24938124 24944265 6141 False 690.40 1531 89.088800 9 4172 5 chr1A.!!$F11 4163
9 TraesCS1B01G056800 chr1A 24561796 24563154 1358 True 621.00 638 87.131500 2878 4012 2 chr1A.!!$R1 1134
10 TraesCS1B01G056800 chr1A 24615102 24619168 4066 False 412.50 416 85.892500 221 615 2 chr1A.!!$F9 394
11 TraesCS1B01G056800 chr1A 24603629 24608020 4391 False 347.00 416 85.762667 20 615 3 chr1A.!!$F8 595
12 TraesCS1B01G056800 chr1A 24591596 24596135 4539 False 314.00 411 85.750000 20 615 2 chr1A.!!$F7 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
783 8568 0.107410 ATCGGCAAGTTAATCGGCCA 60.107 50.0 2.24 0.0 46.75 5.36 F
784 8569 0.107410 TCGGCAAGTTAATCGGCCAT 60.107 50.0 2.24 0.0 46.75 4.40 F
2067 10340 0.179029 CGTCCACCCCTTCACAGTTT 60.179 55.0 0.00 0.0 0.00 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2625 10968 0.251634 CTCCTCTTGCTGACCCTTCC 59.748 60.0 0.00 0.0 0.00 3.46 R
2640 11001 0.983378 AAGCCGTATCCTTGCCTCCT 60.983 55.0 0.00 0.0 0.00 3.69 R
3649 16702 0.818296 GAAGCTTCTCCTGGCGAGTA 59.182 55.0 19.44 0.0 39.84 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 3748 8.840200 TCCTAACTGATATTACCAAGAGTTCT 57.160 34.615 0.00 0.00 0.00 3.01
93 3798 7.448748 TTTATTTAAGCTTCACACTTCTCCC 57.551 36.000 0.00 0.00 0.00 4.30
94 3799 4.706842 TTTAAGCTTCACACTTCTCCCT 57.293 40.909 0.00 0.00 0.00 4.20
95 3800 2.849294 AAGCTTCACACTTCTCCCTC 57.151 50.000 0.00 0.00 0.00 4.30
112 3817 1.067354 CCTCCCTGTGCAAAAATGAGC 60.067 52.381 0.00 0.00 0.00 4.26
117 3828 0.680618 TGTGCAAAAATGAGCCCTGG 59.319 50.000 0.00 0.00 0.00 4.45
225 4045 4.851558 GCTTACATTTTAGTTCACTTGGCG 59.148 41.667 0.00 0.00 0.00 5.69
245 4065 2.415168 CGTGTGCCTAACCTATGTGTTG 59.585 50.000 0.00 0.00 0.00 3.33
261 4082 8.777413 CCTATGTGTTGACTTCATGTTATATGG 58.223 37.037 0.00 0.00 0.00 2.74
281 4106 0.107945 CGGAGGGAAGGAGCTTCTTG 60.108 60.000 13.40 0.00 40.07 3.02
312 7999 3.983344 GCAGGACATGTGTTGATTTTGTC 59.017 43.478 1.15 0.00 36.76 3.18
325 8012 9.495754 GTGTTGATTTTGTCTAGAAATATGAGC 57.504 33.333 0.00 0.00 0.00 4.26
328 8015 8.668510 TGATTTTGTCTAGAAATATGAGCCTC 57.331 34.615 0.00 0.00 0.00 4.70
330 8017 6.814954 TTTGTCTAGAAATATGAGCCTCCT 57.185 37.500 0.00 0.00 0.00 3.69
335 8022 7.051000 GTCTAGAAATATGAGCCTCCTGTTTT 58.949 38.462 0.00 0.00 0.00 2.43
349 8036 6.739565 GCCTCCTGTTTTTCATCATTGTCTTT 60.740 38.462 0.00 0.00 0.00 2.52
374 8061 1.532437 TCAGTGCTTGAACGATGCTTG 59.468 47.619 0.00 0.00 31.34 4.01
440 8133 0.954452 AACTGGCACTAGCAGTTTGC 59.046 50.000 8.04 1.68 45.46 3.68
481 8184 6.541086 CAGAGTTGAAGCAGTTATGAATGAC 58.459 40.000 0.00 0.00 0.00 3.06
498 8202 0.387239 GACGTTTGCAATGCCTCACC 60.387 55.000 1.53 0.00 0.00 4.02
598 8307 6.724893 TTGTAACCTATCCGATGAGATTGA 57.275 37.500 0.00 0.00 0.00 2.57
658 8443 6.271488 TGAAAATTCTAGCATCCCAACTTG 57.729 37.500 0.00 0.00 0.00 3.16
684 8469 3.161866 TGCCCCACCATCTCTTAAAAAC 58.838 45.455 0.00 0.00 0.00 2.43
699 8484 8.744652 TCTCTTAAAAACTGTTGAATCAAACCA 58.255 29.630 0.00 0.00 0.00 3.67
701 8486 9.883142 TCTTAAAAACTGTTGAATCAAACCATT 57.117 25.926 0.00 0.00 0.00 3.16
702 8487 9.919348 CTTAAAAACTGTTGAATCAAACCATTG 57.081 29.630 0.00 0.00 37.92 2.82
703 8488 7.920160 AAAAACTGTTGAATCAAACCATTGT 57.080 28.000 0.00 0.00 37.79 2.71
704 8489 7.920160 AAAACTGTTGAATCAAACCATTGTT 57.080 28.000 0.00 0.00 37.79 2.83
705 8490 6.907206 AACTGTTGAATCAAACCATTGTTG 57.093 33.333 0.00 0.00 37.79 3.33
706 8491 6.219417 ACTGTTGAATCAAACCATTGTTGA 57.781 33.333 0.00 0.00 37.79 3.18
707 8492 6.275335 ACTGTTGAATCAAACCATTGTTGAG 58.725 36.000 0.00 0.00 37.79 3.02
708 8493 5.599732 TGTTGAATCAAACCATTGTTGAGG 58.400 37.500 0.00 0.00 37.79 3.86
709 8494 5.362143 TGTTGAATCAAACCATTGTTGAGGA 59.638 36.000 0.00 0.00 37.79 3.71
710 8495 6.127225 TGTTGAATCAAACCATTGTTGAGGAA 60.127 34.615 0.00 0.00 37.79 3.36
711 8496 6.477053 TGAATCAAACCATTGTTGAGGAAA 57.523 33.333 0.00 0.00 37.79 3.13
712 8497 7.065120 TGAATCAAACCATTGTTGAGGAAAT 57.935 32.000 0.00 0.00 37.79 2.17
713 8498 7.153985 TGAATCAAACCATTGTTGAGGAAATC 58.846 34.615 0.00 0.00 37.79 2.17
714 8499 5.119931 TCAAACCATTGTTGAGGAAATCG 57.880 39.130 0.00 0.00 37.79 3.34
715 8500 4.582656 TCAAACCATTGTTGAGGAAATCGT 59.417 37.500 0.00 0.00 37.79 3.73
716 8501 5.068460 TCAAACCATTGTTGAGGAAATCGTT 59.932 36.000 0.00 0.00 37.79 3.85
717 8502 6.263392 TCAAACCATTGTTGAGGAAATCGTTA 59.737 34.615 0.00 0.00 37.79 3.18
718 8503 6.642707 AACCATTGTTGAGGAAATCGTTAA 57.357 33.333 0.00 0.00 32.13 2.01
719 8504 6.009115 ACCATTGTTGAGGAAATCGTTAAC 57.991 37.500 0.00 0.00 32.93 2.01
720 8505 5.768164 ACCATTGTTGAGGAAATCGTTAACT 59.232 36.000 3.71 0.00 33.31 2.24
721 8506 6.086222 CCATTGTTGAGGAAATCGTTAACTG 58.914 40.000 3.71 0.00 33.31 3.16
722 8507 5.682943 TTGTTGAGGAAATCGTTAACTGG 57.317 39.130 3.71 0.00 33.31 4.00
723 8508 4.710324 TGTTGAGGAAATCGTTAACTGGT 58.290 39.130 3.71 0.00 33.31 4.00
724 8509 5.856156 TGTTGAGGAAATCGTTAACTGGTA 58.144 37.500 3.71 0.00 33.31 3.25
725 8510 5.929992 TGTTGAGGAAATCGTTAACTGGTAG 59.070 40.000 3.71 0.00 33.31 3.18
726 8511 4.501071 TGAGGAAATCGTTAACTGGTAGC 58.499 43.478 3.71 0.00 0.00 3.58
727 8512 4.222145 TGAGGAAATCGTTAACTGGTAGCT 59.778 41.667 3.71 0.00 0.00 3.32
728 8513 4.504858 AGGAAATCGTTAACTGGTAGCTG 58.495 43.478 3.71 0.00 0.00 4.24
729 8514 3.063588 GGAAATCGTTAACTGGTAGCTGC 59.936 47.826 3.71 0.00 0.00 5.25
730 8515 3.611766 AATCGTTAACTGGTAGCTGCT 57.388 42.857 7.57 7.57 0.00 4.24
731 8516 2.649331 TCGTTAACTGGTAGCTGCTC 57.351 50.000 4.91 0.00 0.00 4.26
732 8517 1.135489 TCGTTAACTGGTAGCTGCTCG 60.135 52.381 4.91 0.00 0.00 5.03
733 8518 1.641577 GTTAACTGGTAGCTGCTCGG 58.358 55.000 4.91 0.00 0.00 4.63
734 8519 1.067071 GTTAACTGGTAGCTGCTCGGT 60.067 52.381 4.91 0.41 0.00 4.69
735 8520 1.263356 TAACTGGTAGCTGCTCGGTT 58.737 50.000 16.67 16.67 34.74 4.44
736 8521 0.320771 AACTGGTAGCTGCTCGGTTG 60.321 55.000 4.91 0.00 0.00 3.77
737 8522 1.448540 CTGGTAGCTGCTCGGTTGG 60.449 63.158 4.91 0.00 0.00 3.77
738 8523 2.820037 GGTAGCTGCTCGGTTGGC 60.820 66.667 4.91 0.00 0.00 4.52
739 8524 2.266055 GTAGCTGCTCGGTTGGCT 59.734 61.111 4.91 0.00 38.62 4.75
740 8525 2.103042 GTAGCTGCTCGGTTGGCTG 61.103 63.158 4.91 0.00 36.40 4.85
741 8526 3.315142 TAGCTGCTCGGTTGGCTGG 62.315 63.158 4.91 0.00 36.40 4.85
743 8528 3.052082 CTGCTCGGTTGGCTGGTG 61.052 66.667 0.00 0.00 0.00 4.17
744 8529 3.535629 CTGCTCGGTTGGCTGGTGA 62.536 63.158 0.00 0.00 0.00 4.02
745 8530 2.743928 GCTCGGTTGGCTGGTGAG 60.744 66.667 0.00 0.00 0.00 3.51
746 8531 2.743718 CTCGGTTGGCTGGTGAGT 59.256 61.111 0.00 0.00 0.00 3.41
747 8532 1.972198 CTCGGTTGGCTGGTGAGTA 59.028 57.895 0.00 0.00 0.00 2.59
748 8533 0.108615 CTCGGTTGGCTGGTGAGTAG 60.109 60.000 0.00 0.00 0.00 2.57
749 8534 1.079127 CGGTTGGCTGGTGAGTAGG 60.079 63.158 0.00 0.00 0.00 3.18
750 8535 1.299976 GGTTGGCTGGTGAGTAGGG 59.700 63.158 0.00 0.00 0.00 3.53
751 8536 1.299976 GTTGGCTGGTGAGTAGGGG 59.700 63.158 0.00 0.00 0.00 4.79
752 8537 1.159905 TTGGCTGGTGAGTAGGGGA 59.840 57.895 0.00 0.00 0.00 4.81
753 8538 0.253160 TTGGCTGGTGAGTAGGGGAT 60.253 55.000 0.00 0.00 0.00 3.85
754 8539 0.253160 TGGCTGGTGAGTAGGGGATT 60.253 55.000 0.00 0.00 0.00 3.01
755 8540 1.009060 TGGCTGGTGAGTAGGGGATTA 59.991 52.381 0.00 0.00 0.00 1.75
756 8541 2.124411 GGCTGGTGAGTAGGGGATTAA 58.876 52.381 0.00 0.00 0.00 1.40
757 8542 2.711547 GGCTGGTGAGTAGGGGATTAAT 59.288 50.000 0.00 0.00 0.00 1.40
758 8543 3.244596 GGCTGGTGAGTAGGGGATTAATC 60.245 52.174 6.93 6.93 0.00 1.75
759 8544 3.555168 GCTGGTGAGTAGGGGATTAATCG 60.555 52.174 9.32 0.00 0.00 3.34
760 8545 3.641906 CTGGTGAGTAGGGGATTAATCGT 59.358 47.826 9.32 0.00 0.00 3.73
761 8546 3.640029 TGGTGAGTAGGGGATTAATCGTC 59.360 47.826 9.32 4.41 0.00 4.20
762 8547 3.896272 GGTGAGTAGGGGATTAATCGTCT 59.104 47.826 9.32 10.89 0.00 4.18
763 8548 5.075493 GGTGAGTAGGGGATTAATCGTCTA 58.925 45.833 9.32 10.01 0.00 2.59
764 8549 5.537674 GGTGAGTAGGGGATTAATCGTCTAA 59.462 44.000 9.32 0.00 0.00 2.10
765 8550 6.210984 GGTGAGTAGGGGATTAATCGTCTAAT 59.789 42.308 9.32 11.53 0.00 1.73
766 8551 7.314393 GTGAGTAGGGGATTAATCGTCTAATC 58.686 42.308 22.88 22.88 37.50 1.75
767 8552 6.150641 TGAGTAGGGGATTAATCGTCTAATCG 59.849 42.308 23.40 0.00 38.61 3.34
768 8553 4.803098 AGGGGATTAATCGTCTAATCGG 57.197 45.455 9.32 0.00 38.61 4.18
769 8554 3.056035 AGGGGATTAATCGTCTAATCGGC 60.056 47.826 9.32 0.00 38.61 5.54
770 8555 3.306502 GGGGATTAATCGTCTAATCGGCA 60.307 47.826 9.32 0.00 38.61 5.69
771 8556 4.312443 GGGATTAATCGTCTAATCGGCAA 58.688 43.478 9.32 0.00 38.61 4.52
772 8557 4.389077 GGGATTAATCGTCTAATCGGCAAG 59.611 45.833 9.32 0.00 38.61 4.01
773 8558 4.989168 GGATTAATCGTCTAATCGGCAAGT 59.011 41.667 9.32 0.00 38.61 3.16
774 8559 5.465724 GGATTAATCGTCTAATCGGCAAGTT 59.534 40.000 9.32 0.00 38.61 2.66
775 8560 6.643770 GGATTAATCGTCTAATCGGCAAGTTA 59.356 38.462 9.32 0.00 38.61 2.24
776 8561 7.170320 GGATTAATCGTCTAATCGGCAAGTTAA 59.830 37.037 9.32 0.00 38.61 2.01
777 8562 8.603242 ATTAATCGTCTAATCGGCAAGTTAAT 57.397 30.769 0.00 0.00 0.00 1.40
778 8563 6.526566 AATCGTCTAATCGGCAAGTTAATC 57.473 37.500 0.00 0.00 0.00 1.75
779 8564 4.039703 TCGTCTAATCGGCAAGTTAATCG 58.960 43.478 0.00 0.00 0.00 3.34
780 8565 3.181774 CGTCTAATCGGCAAGTTAATCGG 59.818 47.826 0.00 0.00 0.00 4.18
781 8566 3.059800 GTCTAATCGGCAAGTTAATCGGC 60.060 47.826 0.00 0.00 0.00 5.54
782 8567 1.021968 AATCGGCAAGTTAATCGGCC 58.978 50.000 0.00 0.00 42.98 6.13
783 8568 0.107410 ATCGGCAAGTTAATCGGCCA 60.107 50.000 2.24 0.00 46.75 5.36
784 8569 0.107410 TCGGCAAGTTAATCGGCCAT 60.107 50.000 2.24 0.00 46.75 4.40
785 8570 0.738389 CGGCAAGTTAATCGGCCATT 59.262 50.000 2.24 4.55 46.75 3.16
786 8571 1.134175 CGGCAAGTTAATCGGCCATTT 59.866 47.619 2.24 0.00 46.75 2.32
787 8572 2.356382 CGGCAAGTTAATCGGCCATTTA 59.644 45.455 2.24 0.00 46.75 1.40
788 8573 3.181495 CGGCAAGTTAATCGGCCATTTAA 60.181 43.478 2.24 3.07 46.75 1.52
789 8574 4.499019 CGGCAAGTTAATCGGCCATTTAAT 60.499 41.667 2.24 0.00 46.75 1.40
790 8575 4.982295 GGCAAGTTAATCGGCCATTTAATC 59.018 41.667 2.24 1.98 45.70 1.75
791 8576 4.675114 GCAAGTTAATCGGCCATTTAATCG 59.325 41.667 2.24 0.83 0.00 3.34
792 8577 5.504994 GCAAGTTAATCGGCCATTTAATCGA 60.505 40.000 2.24 0.00 36.07 3.59
793 8578 6.668323 CAAGTTAATCGGCCATTTAATCGAT 58.332 36.000 2.24 0.00 43.06 3.59
795 8580 7.972832 AGTTAATCGGCCATTTAATCGATTA 57.027 32.000 13.85 13.85 46.23 1.75
799 8584 6.542852 AATCGGCCATTTAATCGATTAATCG 58.457 36.000 27.99 27.99 46.23 3.34
826 8611 7.737525 CGATTTATCGGTTTATAGGCTACTC 57.262 40.000 0.00 0.00 45.93 2.59
827 8612 6.468319 CGATTTATCGGTTTATAGGCTACTCG 59.532 42.308 0.00 0.00 45.93 4.18
828 8613 5.633830 TTATCGGTTTATAGGCTACTCGG 57.366 43.478 0.00 0.00 0.00 4.63
829 8614 2.936202 TCGGTTTATAGGCTACTCGGT 58.064 47.619 0.00 0.00 0.00 4.69
830 8615 2.620115 TCGGTTTATAGGCTACTCGGTG 59.380 50.000 0.00 0.00 0.00 4.94
831 8616 2.620115 CGGTTTATAGGCTACTCGGTGA 59.380 50.000 0.00 0.00 0.00 4.02
832 8617 3.549625 CGGTTTATAGGCTACTCGGTGAC 60.550 52.174 0.00 0.00 0.00 3.67
833 8618 3.243670 GGTTTATAGGCTACTCGGTGACC 60.244 52.174 0.00 0.00 0.00 4.02
834 8619 2.283145 TATAGGCTACTCGGTGACCC 57.717 55.000 0.00 0.00 0.00 4.46
835 8620 0.556747 ATAGGCTACTCGGTGACCCT 59.443 55.000 0.00 0.00 0.00 4.34
836 8621 1.216064 TAGGCTACTCGGTGACCCTA 58.784 55.000 0.00 0.00 0.00 3.53
837 8622 0.395448 AGGCTACTCGGTGACCCTAC 60.395 60.000 0.00 0.00 0.00 3.18
838 8623 1.722636 GGCTACTCGGTGACCCTACG 61.723 65.000 0.00 0.00 0.00 3.51
839 8624 0.745845 GCTACTCGGTGACCCTACGA 60.746 60.000 0.00 0.00 35.14 3.43
841 8626 4.315588 CTCGGTGACCCTACGAGT 57.684 61.111 0.00 0.00 46.43 4.18
842 8627 3.465990 CTCGGTGACCCTACGAGTA 57.534 57.895 0.00 0.00 46.43 2.59
843 8628 1.297664 CTCGGTGACCCTACGAGTAG 58.702 60.000 0.00 3.39 46.43 2.57
857 8642 3.380479 CGAGTAGGGATTAATCGGCAA 57.620 47.619 9.32 0.00 43.89 4.52
858 8643 3.318017 CGAGTAGGGATTAATCGGCAAG 58.682 50.000 9.32 0.00 43.89 4.01
859 8644 3.243771 CGAGTAGGGATTAATCGGCAAGT 60.244 47.826 9.32 0.00 43.89 3.16
860 8645 4.704965 GAGTAGGGATTAATCGGCAAGTT 58.295 43.478 9.32 0.00 0.00 2.66
861 8646 5.508489 CGAGTAGGGATTAATCGGCAAGTTA 60.508 44.000 9.32 0.00 43.89 2.24
862 8647 6.243216 AGTAGGGATTAATCGGCAAGTTAA 57.757 37.500 9.32 0.00 0.00 2.01
863 8648 6.053650 AGTAGGGATTAATCGGCAAGTTAAC 58.946 40.000 9.32 0.00 0.00 2.01
864 8649 5.112129 AGGGATTAATCGGCAAGTTAACT 57.888 39.130 9.32 1.12 0.00 2.24
865 8650 4.881850 AGGGATTAATCGGCAAGTTAACTG 59.118 41.667 9.34 4.88 0.00 3.16
866 8651 4.036380 GGGATTAATCGGCAAGTTAACTGG 59.964 45.833 9.34 7.35 0.00 4.00
867 8652 4.638865 GGATTAATCGGCAAGTTAACTGGT 59.361 41.667 9.34 0.00 0.00 4.00
868 8653 5.124936 GGATTAATCGGCAAGTTAACTGGTT 59.875 40.000 9.34 1.66 0.00 3.67
869 8654 6.316890 GGATTAATCGGCAAGTTAACTGGTTA 59.683 38.462 9.34 0.65 0.00 2.85
870 8655 7.148205 GGATTAATCGGCAAGTTAACTGGTTAA 60.148 37.037 9.34 9.79 33.48 2.01
871 8656 7.690952 TTAATCGGCAAGTTAACTGGTTAAT 57.309 32.000 9.34 0.00 37.37 1.40
872 8657 5.813080 ATCGGCAAGTTAACTGGTTAATC 57.187 39.130 9.34 0.00 37.37 1.75
873 8658 3.680937 TCGGCAAGTTAACTGGTTAATCG 59.319 43.478 9.34 7.09 37.37 3.34
874 8659 3.181514 CGGCAAGTTAACTGGTTAATCGG 60.182 47.826 9.34 0.00 37.37 4.18
875 8660 4.004982 GGCAAGTTAACTGGTTAATCGGA 58.995 43.478 9.34 0.00 37.37 4.55
876 8661 4.638865 GGCAAGTTAACTGGTTAATCGGAT 59.361 41.667 9.34 0.00 37.37 4.18
877 8662 5.448632 GGCAAGTTAACTGGTTAATCGGATG 60.449 44.000 9.34 0.03 37.37 3.51
878 8663 5.353123 GCAAGTTAACTGGTTAATCGGATGA 59.647 40.000 9.34 0.00 37.37 2.92
879 8664 6.128117 GCAAGTTAACTGGTTAATCGGATGAA 60.128 38.462 9.34 0.00 37.37 2.57
880 8665 7.415206 GCAAGTTAACTGGTTAATCGGATGAAT 60.415 37.037 9.34 0.00 37.37 2.57
881 8666 8.458843 CAAGTTAACTGGTTAATCGGATGAATT 58.541 33.333 9.34 0.00 37.37 2.17
882 8667 8.209917 AGTTAACTGGTTAATCGGATGAATTC 57.790 34.615 7.48 0.00 37.37 2.17
883 8668 8.047310 AGTTAACTGGTTAATCGGATGAATTCT 58.953 33.333 7.48 0.00 37.37 2.40
884 8669 8.674607 GTTAACTGGTTAATCGGATGAATTCTT 58.325 33.333 7.05 0.00 37.37 2.52
885 8670 6.683974 ACTGGTTAATCGGATGAATTCTTG 57.316 37.500 7.05 0.00 0.00 3.02
886 8671 6.414732 ACTGGTTAATCGGATGAATTCTTGA 58.585 36.000 7.05 0.00 0.00 3.02
887 8672 6.884295 ACTGGTTAATCGGATGAATTCTTGAA 59.116 34.615 7.05 0.00 0.00 2.69
888 8673 7.083875 TGGTTAATCGGATGAATTCTTGAAC 57.916 36.000 7.05 0.68 0.00 3.18
889 8674 6.657117 TGGTTAATCGGATGAATTCTTGAACA 59.343 34.615 7.05 0.00 0.00 3.18
890 8675 7.148255 TGGTTAATCGGATGAATTCTTGAACAG 60.148 37.037 7.05 0.00 0.00 3.16
891 8676 5.824904 AATCGGATGAATTCTTGAACAGG 57.175 39.130 7.05 0.00 0.00 4.00
892 8677 3.609853 TCGGATGAATTCTTGAACAGGG 58.390 45.455 7.05 0.00 0.00 4.45
893 8678 3.263170 TCGGATGAATTCTTGAACAGGGA 59.737 43.478 7.05 0.00 0.00 4.20
894 8679 4.009675 CGGATGAATTCTTGAACAGGGAA 58.990 43.478 7.05 0.00 0.00 3.97
895 8680 4.641989 CGGATGAATTCTTGAACAGGGAAT 59.358 41.667 7.05 0.00 0.00 3.01
896 8681 5.220931 CGGATGAATTCTTGAACAGGGAATC 60.221 44.000 7.05 0.00 0.00 2.52
897 8682 5.653769 GGATGAATTCTTGAACAGGGAATCA 59.346 40.000 7.05 0.00 0.00 2.57
898 8683 6.153340 GGATGAATTCTTGAACAGGGAATCAA 59.847 38.462 7.05 0.00 34.57 2.57
899 8684 6.975196 TGAATTCTTGAACAGGGAATCAAA 57.025 33.333 7.05 0.00 35.31 2.69
900 8685 6.748132 TGAATTCTTGAACAGGGAATCAAAC 58.252 36.000 7.05 0.00 35.31 2.93
919 8704 3.626028 ACAAGGTGCGAAACTGATTTC 57.374 42.857 0.00 0.00 40.83 2.17
986 8787 4.020485 ACTGGAATTACAAGCTAGTTCGGT 60.020 41.667 0.00 0.00 0.00 4.69
988 8789 6.040209 TGGAATTACAAGCTAGTTCGGTAA 57.960 37.500 0.00 6.36 0.00 2.85
990 8791 5.292834 GGAATTACAAGCTAGTTCGGTAACC 59.707 44.000 6.12 2.41 36.15 2.85
993 8794 6.528537 TTACAAGCTAGTTCGGTAACCATA 57.471 37.500 0.00 0.00 36.15 2.74
996 8797 5.163540 ACAAGCTAGTTCGGTAACCATAGAG 60.164 44.000 0.00 0.00 36.15 2.43
998 8799 4.579753 AGCTAGTTCGGTAACCATAGAGAC 59.420 45.833 0.00 0.00 36.15 3.36
1046 8847 8.862325 AAAACCACATGTCATGAAGATACTAA 57.138 30.769 19.77 0.00 0.00 2.24
1050 8851 6.018425 CCACATGTCATGAAGATACTAACAGC 60.018 42.308 19.77 0.00 0.00 4.40
1051 8852 5.750547 ACATGTCATGAAGATACTAACAGCG 59.249 40.000 19.77 0.00 0.00 5.18
1062 8863 1.482182 ACTAACAGCGCTGATGGATCA 59.518 47.619 42.03 15.39 35.16 2.92
1063 8864 2.093500 ACTAACAGCGCTGATGGATCAA 60.093 45.455 42.03 14.63 36.18 2.57
1064 8865 1.376543 AACAGCGCTGATGGATCAAG 58.623 50.000 42.03 13.57 36.18 3.02
1080 8881 4.999950 GGATCAAGAAGCACGGATGAATAT 59.000 41.667 0.00 0.00 0.00 1.28
1089 8890 4.005650 GCACGGATGAATATGATCCATGT 58.994 43.478 12.44 3.16 39.65 3.21
1166 8970 2.159338 TCCGTTTAGTAGCTAAGGTGCG 60.159 50.000 0.00 0.00 38.13 5.34
1184 8992 2.223618 TGCGGCAACTAACCAACTTTTC 60.224 45.455 0.00 0.00 0.00 2.29
1196 9004 9.419297 ACTAACCAACTTTTCTTTTTGAACTTC 57.581 29.630 0.00 0.00 33.88 3.01
1201 9009 7.548780 CCAACTTTTCTTTTTGAACTTCATGGA 59.451 33.333 0.00 0.00 33.88 3.41
1250 9058 0.669077 AGTATAGCTCTTGACGCCCG 59.331 55.000 0.00 0.00 0.00 6.13
1321 9526 5.310594 TGCCCTTAGAGCATCCAGTATAATT 59.689 40.000 0.00 0.00 34.69 1.40
1322 9527 5.645497 GCCCTTAGAGCATCCAGTATAATTG 59.355 44.000 0.00 0.00 33.66 2.32
1393 9661 7.443259 TGGTTAATTACTTTTCCTGCAGTAC 57.557 36.000 13.81 0.00 0.00 2.73
1418 9686 3.879892 TGTGTGTGTGCTACTTATGCAAA 59.120 39.130 0.00 0.00 42.41 3.68
1419 9687 4.518590 TGTGTGTGTGCTACTTATGCAAAT 59.481 37.500 0.00 0.00 42.41 2.32
1420 9688 5.703130 TGTGTGTGTGCTACTTATGCAAATA 59.297 36.000 0.00 0.00 42.41 1.40
1480 9750 7.195646 TCATTTTGCTTTGCTAATCGGATAAG 58.804 34.615 0.00 0.00 0.00 1.73
1523 9795 5.360714 TGATTCTGAATGGGTCAATTTAGGC 59.639 40.000 7.78 0.00 35.22 3.93
1613 9885 4.078639 GCTTTCTCAGCTATATGTGGGT 57.921 45.455 0.00 0.00 46.27 4.51
1642 9914 2.495866 GCATGCAATGGGGTTCGG 59.504 61.111 14.21 0.00 46.86 4.30
1650 9922 0.695924 AATGGGGTTCGGTCATCACA 59.304 50.000 0.00 0.00 0.00 3.58
1686 9958 7.613585 TGAACCATATGATTTCACAAAATGCT 58.386 30.769 3.65 0.00 35.21 3.79
1689 9961 7.388437 ACCATATGATTTCACAAAATGCTGTT 58.612 30.769 3.65 0.00 35.21 3.16
1704 9976 7.467557 AAATGCTGTTAAATGTGTCAAAGTG 57.532 32.000 0.00 0.00 0.00 3.16
1938 10210 3.804325 ACACGTGCATGCATAAGTATCTC 59.196 43.478 25.64 6.36 0.00 2.75
1945 10217 5.221322 TGCATGCATAAGTATCTCGAAGACT 60.221 40.000 18.46 0.00 0.00 3.24
2049 10322 2.878406 ACCTGAAATGGTTTGTCTCACG 59.122 45.455 0.00 0.00 36.89 4.35
2060 10333 1.292541 GTCTCACGTCCACCCCTTC 59.707 63.158 0.00 0.00 0.00 3.46
2064 10337 1.301716 CACGTCCACCCCTTCACAG 60.302 63.158 0.00 0.00 0.00 3.66
2065 10338 1.764854 ACGTCCACCCCTTCACAGT 60.765 57.895 0.00 0.00 0.00 3.55
2066 10339 1.342672 ACGTCCACCCCTTCACAGTT 61.343 55.000 0.00 0.00 0.00 3.16
2067 10340 0.179029 CGTCCACCCCTTCACAGTTT 60.179 55.000 0.00 0.00 0.00 2.66
2068 10341 1.071071 CGTCCACCCCTTCACAGTTTA 59.929 52.381 0.00 0.00 0.00 2.01
2069 10342 2.779506 GTCCACCCCTTCACAGTTTAG 58.220 52.381 0.00 0.00 0.00 1.85
2070 10343 2.370849 GTCCACCCCTTCACAGTTTAGA 59.629 50.000 0.00 0.00 0.00 2.10
2140 10414 6.046593 CGTAGCAATAATACTCAAGGAACCA 58.953 40.000 0.00 0.00 0.00 3.67
2163 10505 6.925165 CCATAAATTCCTACATCACCATTTGC 59.075 38.462 0.00 0.00 0.00 3.68
2174 10516 1.670811 CACCATTTGCCATAGTCGGAC 59.329 52.381 0.00 0.00 0.00 4.79
2176 10518 2.769663 ACCATTTGCCATAGTCGGACTA 59.230 45.455 19.38 19.38 34.82 2.59
2181 10523 5.664294 TTTGCCATAGTCGGACTAGTTTA 57.336 39.130 21.29 2.14 33.66 2.01
2254 10596 8.856490 AACAAACTCTATTTTGCTGTTAACAG 57.144 30.769 27.85 27.85 46.40 3.16
2318 10660 8.345565 AGAACACAGTTTTAAGTTAATCAGCAG 58.654 33.333 0.00 0.00 0.00 4.24
2320 10662 7.996385 ACACAGTTTTAAGTTAATCAGCAGTT 58.004 30.769 0.00 0.00 0.00 3.16
2326 10668 4.756084 AAGTTAATCAGCAGTTCAGCAC 57.244 40.909 0.00 0.00 36.85 4.40
2328 10670 5.152623 AGTTAATCAGCAGTTCAGCACTA 57.847 39.130 0.00 0.00 36.85 2.74
2372 10715 7.672983 TTCTATAAGGACTCTGCTTTTGTTG 57.327 36.000 0.00 0.00 0.00 3.33
2433 10776 3.696051 ACTCGGCTGATTGCAAAATACAT 59.304 39.130 1.71 0.00 45.15 2.29
2461 10804 4.142609 TCTATTGGATGAGCTGTGGAAC 57.857 45.455 0.00 0.00 37.35 3.62
2504 10847 0.946221 CGAGACAGCCGTTTTGCTCT 60.946 55.000 0.00 0.00 40.32 4.09
2585 10928 3.507622 GCCAGATGGGTTTGCTATTATCC 59.492 47.826 0.12 0.00 39.65 2.59
2620 10963 5.199024 TGAACAACAGTATTGCTTTGCAT 57.801 34.783 0.00 0.00 38.76 3.96
2625 10968 4.445452 ACAGTATTGCTTTGCATTCTGG 57.555 40.909 16.47 3.38 38.76 3.86
2640 11001 0.473694 TCTGGGAAGGGTCAGCAAGA 60.474 55.000 0.00 0.00 0.00 3.02
2654 11015 1.488393 AGCAAGAGGAGGCAAGGATAC 59.512 52.381 0.00 0.00 0.00 2.24
2655 11016 1.808133 GCAAGAGGAGGCAAGGATACG 60.808 57.143 0.00 0.00 46.39 3.06
2695 11056 8.697846 CATTGATGCTTGTTCATGTAATTTCT 57.302 30.769 0.00 0.00 0.00 2.52
2714 11075 8.635765 AATTTCTAAAGCTGGTGAATGTCTTA 57.364 30.769 0.00 0.00 0.00 2.10
2756 11127 5.537300 TCTAGAGGTATCATTCTGTTGGC 57.463 43.478 0.00 0.00 0.00 4.52
2764 11135 0.455633 CATTCTGTTGGCGCTTGCTC 60.456 55.000 7.64 0.00 39.13 4.26
2777 11173 3.422214 GCGCTTGCTCTTACAAAAATTGC 60.422 43.478 0.00 0.00 35.07 3.56
2781 11177 6.089283 CGCTTGCTCTTACAAAAATTGCATAA 59.911 34.615 0.00 0.00 0.00 1.90
2782 11178 7.359097 CGCTTGCTCTTACAAAAATTGCATAAA 60.359 33.333 0.00 0.00 0.00 1.40
2816 11216 9.875708 AGTATATTTGCATTTTGGTAATCCCTA 57.124 29.630 0.00 0.00 0.00 3.53
2829 11229 7.496346 TGGTAATCCCTACATTATCTGATCC 57.504 40.000 0.00 0.00 31.45 3.36
2867 11292 7.846644 AGAAACACTGATCAAAATTTTTGCA 57.153 28.000 15.52 8.88 0.00 4.08
2868 11293 8.266392 AGAAACACTGATCAAAATTTTTGCAA 57.734 26.923 15.52 0.00 0.00 4.08
2901 14639 5.806654 ACTGTTCCCACTGCAAATAATTT 57.193 34.783 0.00 0.00 0.00 1.82
2935 14678 5.852282 TCTTAGTCATCACGATTCATGGA 57.148 39.130 0.00 0.00 0.00 3.41
2971 14721 5.668558 ATCTCACAAGTTAAAACGGTCAC 57.331 39.130 0.00 0.00 0.00 3.67
2972 14722 4.761975 TCTCACAAGTTAAAACGGTCACT 58.238 39.130 0.00 0.00 0.00 3.41
2980 14730 0.180406 AAAACGGTCACTCAGGTGCT 59.820 50.000 0.00 0.00 42.72 4.40
2999 14749 1.064505 CTGTATTTCATGCAGGTGCCG 59.935 52.381 0.00 0.00 39.03 5.69
3013 14763 1.971167 TGCCGCATTTGGAGGTCAC 60.971 57.895 0.00 0.00 38.95 3.67
3051 14801 7.223971 CGTCGATTCTCAAGGATAATGGTTTTA 59.776 37.037 0.00 0.00 0.00 1.52
3095 14845 7.571080 AGAAATTGGAAACCTGTACGTTTTA 57.429 32.000 0.00 0.00 36.10 1.52
3096 14846 7.998580 AGAAATTGGAAACCTGTACGTTTTAA 58.001 30.769 0.00 1.76 36.10 1.52
3101 14851 6.056884 TGGAAACCTGTACGTTTTAATCACT 58.943 36.000 0.00 0.00 36.10 3.41
3115 14897 8.891928 CGTTTTAATCACTGACTGTTTTGTATG 58.108 33.333 0.00 0.00 0.00 2.39
3267 15070 6.487668 TGAAGCATTTCTTTCAAGATGTGAGA 59.512 34.615 6.09 0.00 34.34 3.27
3268 15071 6.889301 AGCATTTCTTTCAAGATGTGAGAA 57.111 33.333 6.09 0.00 37.61 2.87
3309 15125 8.515695 TGGATATGATATGATGAAAATCAGGC 57.484 34.615 0.00 0.00 33.40 4.85
3330 16106 2.287915 CGAAAGTGACACAAACAGGGAG 59.712 50.000 8.59 0.00 0.00 4.30
3353 16129 7.364320 GGAGGCTCTAGAAATGGATTATCTACC 60.364 44.444 15.23 0.00 0.00 3.18
3410 16259 8.057623 ACATTAGGTCCAAAGAATTGATCTGAT 58.942 33.333 0.00 0.00 38.79 2.90
3422 16271 7.182860 AGAATTGATCTGATGCTCAAGAGCTC 61.183 42.308 21.35 5.27 45.32 4.09
3452 16480 8.927675 TGTGGTTTGTACCTTTAGTCAATAAT 57.072 30.769 0.00 0.00 45.27 1.28
3463 16491 9.197306 ACCTTTAGTCAATAATAAAATCCCCAC 57.803 33.333 0.00 0.00 0.00 4.61
3466 16494 9.983024 TTTAGTCAATAATAAAATCCCCACTCA 57.017 29.630 0.00 0.00 0.00 3.41
3471 16499 9.094578 TCAATAATAAAATCCCCACTCAAAACA 57.905 29.630 0.00 0.00 0.00 2.83
3480 16508 6.985653 TCCCCACTCAAAACAAAATTATGA 57.014 33.333 0.00 0.00 0.00 2.15
3484 16512 8.364142 CCCCACTCAAAACAAAATTATGAGTAA 58.636 33.333 6.43 0.00 46.53 2.24
3547 16579 9.851686 AACATCTAATATCTCAAGGCATTGTTA 57.148 29.630 11.36 1.26 37.68 2.41
3550 16582 7.801104 TCTAATATCTCAAGGCATTGTTACCA 58.199 34.615 11.36 0.00 37.68 3.25
3614 16667 2.818714 CTCAAGAGCCAGGCTGCG 60.819 66.667 22.26 6.87 39.88 5.18
3649 16702 1.459455 CCGAGACGATGGGAGCTCAT 61.459 60.000 17.19 1.05 0.00 2.90
4182 20752 2.247790 CCCACTGGCAGTTTCTTCG 58.752 57.895 19.43 5.34 0.00 3.79
4183 20753 1.237285 CCCACTGGCAGTTTCTTCGG 61.237 60.000 19.43 14.70 0.00 4.30
4184 20754 0.250295 CCACTGGCAGTTTCTTCGGA 60.250 55.000 19.43 0.00 0.00 4.55
4185 20755 1.611673 CCACTGGCAGTTTCTTCGGAT 60.612 52.381 19.43 0.00 0.00 4.18
4186 20756 1.734465 CACTGGCAGTTTCTTCGGATC 59.266 52.381 19.43 0.00 0.00 3.36
4187 20757 1.347707 ACTGGCAGTTTCTTCGGATCA 59.652 47.619 15.88 0.00 0.00 2.92
4188 20758 2.005451 CTGGCAGTTTCTTCGGATCAG 58.995 52.381 6.28 0.00 0.00 2.90
4189 20759 1.347707 TGGCAGTTTCTTCGGATCAGT 59.652 47.619 0.00 0.00 0.00 3.41
4190 20760 2.224523 TGGCAGTTTCTTCGGATCAGTT 60.225 45.455 0.00 0.00 0.00 3.16
4191 20761 2.160417 GGCAGTTTCTTCGGATCAGTTG 59.840 50.000 0.00 0.00 0.00 3.16
4192 20762 3.067106 GCAGTTTCTTCGGATCAGTTGA 58.933 45.455 0.00 0.00 0.00 3.18
4193 20763 3.124297 GCAGTTTCTTCGGATCAGTTGAG 59.876 47.826 0.00 0.00 0.00 3.02
4194 20764 4.560128 CAGTTTCTTCGGATCAGTTGAGA 58.440 43.478 0.00 0.00 0.00 3.27
4195 20765 4.991056 CAGTTTCTTCGGATCAGTTGAGAA 59.009 41.667 0.00 0.58 0.00 2.87
4196 20766 5.466728 CAGTTTCTTCGGATCAGTTGAGAAA 59.533 40.000 13.20 13.20 0.00 2.52
4197 20767 5.467063 AGTTTCTTCGGATCAGTTGAGAAAC 59.533 40.000 25.15 25.15 42.12 2.78
4198 20768 4.873746 TCTTCGGATCAGTTGAGAAACT 57.126 40.909 0.00 0.00 0.00 2.66
4199 20769 8.638495 AGTTTCTTCGGATCAGTTGAGAAACTG 61.638 40.741 29.21 11.49 46.70 3.16
4209 20779 6.017400 CAGTTGAGAAACTGCCAATTATGT 57.983 37.500 5.73 0.00 42.96 2.29
4210 20780 6.449698 CAGTTGAGAAACTGCCAATTATGTT 58.550 36.000 5.73 0.00 42.96 2.71
4211 20781 6.364165 CAGTTGAGAAACTGCCAATTATGTTG 59.636 38.462 5.73 0.00 42.96 3.33
4212 20782 6.040842 AGTTGAGAAACTGCCAATTATGTTGT 59.959 34.615 0.00 0.00 0.00 3.32
4213 20783 7.230510 AGTTGAGAAACTGCCAATTATGTTGTA 59.769 33.333 0.00 0.00 0.00 2.41
4214 20784 7.517614 TGAGAAACTGCCAATTATGTTGTAA 57.482 32.000 0.00 0.00 0.00 2.41
4215 20785 7.946207 TGAGAAACTGCCAATTATGTTGTAAA 58.054 30.769 0.00 0.00 0.00 2.01
4236 20806 2.597455 CCTTCCCAAGGTTCACATTGT 58.403 47.619 3.84 0.00 43.95 2.71
4237 20807 2.965147 CCTTCCCAAGGTTCACATTGTT 59.035 45.455 3.84 0.00 43.95 2.83
4238 20808 3.387699 CCTTCCCAAGGTTCACATTGTTT 59.612 43.478 3.84 0.00 43.95 2.83
4239 20809 4.141733 CCTTCCCAAGGTTCACATTGTTTT 60.142 41.667 3.84 0.00 43.95 2.43
4240 20810 4.664150 TCCCAAGGTTCACATTGTTTTC 57.336 40.909 3.84 0.00 36.04 2.29
4241 20811 3.386402 TCCCAAGGTTCACATTGTTTTCC 59.614 43.478 3.84 0.00 36.04 3.13
4242 20812 3.494223 CCCAAGGTTCACATTGTTTTCCC 60.494 47.826 3.84 0.00 36.04 3.97
4243 20813 3.133721 CCAAGGTTCACATTGTTTTCCCA 59.866 43.478 3.84 0.00 36.04 4.37
4244 20814 4.119136 CAAGGTTCACATTGTTTTCCCAC 58.881 43.478 0.00 0.00 33.45 4.61
4245 20815 3.370104 AGGTTCACATTGTTTTCCCACA 58.630 40.909 0.00 0.00 0.00 4.17
4246 20816 3.772025 AGGTTCACATTGTTTTCCCACAA 59.228 39.130 0.00 0.00 40.92 3.33
4247 20817 3.868661 GGTTCACATTGTTTTCCCACAAC 59.131 43.478 0.00 0.00 39.48 3.32
4248 20818 4.382577 GGTTCACATTGTTTTCCCACAACT 60.383 41.667 0.00 0.00 39.48 3.16
4249 20819 4.383850 TCACATTGTTTTCCCACAACTG 57.616 40.909 0.00 0.00 39.48 3.16
4250 20820 2.865551 CACATTGTTTTCCCACAACTGC 59.134 45.455 0.00 0.00 39.48 4.40
4251 20821 2.765699 ACATTGTTTTCCCACAACTGCT 59.234 40.909 0.00 0.00 39.48 4.24
4252 20822 3.197549 ACATTGTTTTCCCACAACTGCTT 59.802 39.130 0.00 0.00 39.48 3.91
4253 20823 3.971245 TTGTTTTCCCACAACTGCTTT 57.029 38.095 0.00 0.00 31.48 3.51
4254 20824 5.105146 ACATTGTTTTCCCACAACTGCTTTA 60.105 36.000 0.00 0.00 39.48 1.85
4255 20825 5.606348 TTGTTTTCCCACAACTGCTTTAT 57.394 34.783 0.00 0.00 31.48 1.40
4256 20826 5.195001 TGTTTTCCCACAACTGCTTTATC 57.805 39.130 0.00 0.00 0.00 1.75
4257 20827 4.646945 TGTTTTCCCACAACTGCTTTATCA 59.353 37.500 0.00 0.00 0.00 2.15
4258 20828 5.127845 TGTTTTCCCACAACTGCTTTATCAA 59.872 36.000 0.00 0.00 0.00 2.57
4259 20829 4.846779 TTCCCACAACTGCTTTATCAAC 57.153 40.909 0.00 0.00 0.00 3.18
4260 20830 4.098914 TCCCACAACTGCTTTATCAACT 57.901 40.909 0.00 0.00 0.00 3.16
4261 20831 4.072131 TCCCACAACTGCTTTATCAACTC 58.928 43.478 0.00 0.00 0.00 3.01
4262 20832 4.074970 CCCACAACTGCTTTATCAACTCT 58.925 43.478 0.00 0.00 0.00 3.24
4263 20833 4.520492 CCCACAACTGCTTTATCAACTCTT 59.480 41.667 0.00 0.00 0.00 2.85
4264 20834 5.010012 CCCACAACTGCTTTATCAACTCTTT 59.990 40.000 0.00 0.00 0.00 2.52
4265 20835 5.916883 CCACAACTGCTTTATCAACTCTTTG 59.083 40.000 0.00 0.00 0.00 2.77
4266 20836 5.400485 CACAACTGCTTTATCAACTCTTTGC 59.600 40.000 0.00 0.00 32.17 3.68
4267 20837 5.300286 ACAACTGCTTTATCAACTCTTTGCT 59.700 36.000 0.00 0.00 32.17 3.91
4268 20838 5.368256 ACTGCTTTATCAACTCTTTGCTG 57.632 39.130 0.00 0.00 32.17 4.41
4269 20839 4.823989 ACTGCTTTATCAACTCTTTGCTGT 59.176 37.500 0.00 0.00 32.17 4.40
4270 20840 5.997746 ACTGCTTTATCAACTCTTTGCTGTA 59.002 36.000 0.00 0.00 32.17 2.74
4271 20841 6.148480 ACTGCTTTATCAACTCTTTGCTGTAG 59.852 38.462 0.00 0.00 32.17 2.74
4272 20842 6.230472 TGCTTTATCAACTCTTTGCTGTAGA 58.770 36.000 0.00 0.00 32.17 2.59
4273 20843 6.147821 TGCTTTATCAACTCTTTGCTGTAGAC 59.852 38.462 0.00 0.00 32.17 2.59
4274 20844 6.670927 GCTTTATCAACTCTTTGCTGTAGACG 60.671 42.308 0.00 0.00 32.17 4.18
4275 20845 3.728076 TCAACTCTTTGCTGTAGACGT 57.272 42.857 0.00 0.00 32.17 4.34
4276 20846 4.054780 TCAACTCTTTGCTGTAGACGTT 57.945 40.909 0.00 0.00 32.17 3.99
4277 20847 3.802139 TCAACTCTTTGCTGTAGACGTTG 59.198 43.478 0.00 0.00 35.04 4.10
4278 20848 3.728076 ACTCTTTGCTGTAGACGTTGA 57.272 42.857 0.00 0.00 0.00 3.18
4279 20849 4.258702 ACTCTTTGCTGTAGACGTTGAT 57.741 40.909 0.00 0.00 0.00 2.57
4280 20850 3.990469 ACTCTTTGCTGTAGACGTTGATG 59.010 43.478 0.00 0.00 0.00 3.07
4281 20851 3.990092 TCTTTGCTGTAGACGTTGATGT 58.010 40.909 0.00 0.00 0.00 3.06
4282 20852 3.740832 TCTTTGCTGTAGACGTTGATGTG 59.259 43.478 0.00 0.00 0.00 3.21
4283 20853 2.812358 TGCTGTAGACGTTGATGTGT 57.188 45.000 0.00 0.00 0.00 3.72
4284 20854 3.106242 TGCTGTAGACGTTGATGTGTT 57.894 42.857 0.00 0.00 0.00 3.32
4285 20855 3.462982 TGCTGTAGACGTTGATGTGTTT 58.537 40.909 0.00 0.00 0.00 2.83
4286 20856 3.247411 TGCTGTAGACGTTGATGTGTTTG 59.753 43.478 0.00 0.00 0.00 2.93
4287 20857 3.247648 GCTGTAGACGTTGATGTGTTTGT 59.752 43.478 0.00 0.00 0.00 2.83
4288 20858 4.761745 CTGTAGACGTTGATGTGTTTGTG 58.238 43.478 0.00 0.00 0.00 3.33
4289 20859 2.755836 AGACGTTGATGTGTTTGTGC 57.244 45.000 0.00 0.00 0.00 4.57
4290 20860 1.003972 AGACGTTGATGTGTTTGTGCG 60.004 47.619 0.00 0.00 0.00 5.34
4291 20861 1.004398 GACGTTGATGTGTTTGTGCGA 60.004 47.619 0.00 0.00 0.00 5.10
4292 20862 1.601903 ACGTTGATGTGTTTGTGCGAT 59.398 42.857 0.00 0.00 0.00 4.58
4293 20863 1.971284 CGTTGATGTGTTTGTGCGATG 59.029 47.619 0.00 0.00 0.00 3.84
4294 20864 2.318578 GTTGATGTGTTTGTGCGATGG 58.681 47.619 0.00 0.00 0.00 3.51
4295 20865 0.240678 TGATGTGTTTGTGCGATGGC 59.759 50.000 0.00 0.00 40.52 4.40
4296 20866 0.456653 GATGTGTTTGTGCGATGGCC 60.457 55.000 0.00 0.00 38.85 5.36
4297 20867 1.177895 ATGTGTTTGTGCGATGGCCA 61.178 50.000 8.56 8.56 38.85 5.36
4298 20868 1.371635 GTGTTTGTGCGATGGCCAC 60.372 57.895 8.16 0.47 38.85 5.01
4299 20869 1.528076 TGTTTGTGCGATGGCCACT 60.528 52.632 8.16 0.00 38.85 4.00
4300 20870 1.081242 GTTTGTGCGATGGCCACTG 60.081 57.895 8.16 4.17 38.85 3.66
4301 20871 2.918345 TTTGTGCGATGGCCACTGC 61.918 57.895 21.20 21.20 38.85 4.40
4302 20872 4.639906 TGTGCGATGGCCACTGCA 62.640 61.111 25.48 25.48 40.13 4.41
4306 20876 2.360350 CGATGGCCACTGCACCTT 60.360 61.111 8.16 0.00 40.13 3.50
4307 20877 2.401766 CGATGGCCACTGCACCTTC 61.402 63.158 8.16 0.00 40.13 3.46
4308 20878 1.001641 GATGGCCACTGCACCTTCT 60.002 57.895 8.16 0.00 40.13 2.85
4309 20879 1.001641 ATGGCCACTGCACCTTCTC 60.002 57.895 8.16 0.00 40.13 2.87
4310 20880 1.782201 ATGGCCACTGCACCTTCTCA 61.782 55.000 8.16 0.00 40.13 3.27
4311 20881 1.673665 GGCCACTGCACCTTCTCAG 60.674 63.158 0.00 0.00 40.13 3.35
4312 20882 1.072159 GCCACTGCACCTTCTCAGT 59.928 57.895 0.00 0.00 43.67 3.41
4320 20890 2.086054 CACCTTCTCAGTGCTGTACC 57.914 55.000 0.00 0.00 0.00 3.34
4321 20891 1.344438 CACCTTCTCAGTGCTGTACCA 59.656 52.381 0.00 0.00 0.00 3.25
4322 20892 1.620819 ACCTTCTCAGTGCTGTACCAG 59.379 52.381 0.00 0.00 34.12 4.00
4333 20903 2.820059 CTGTACCAGCTGTTGTCTGA 57.180 50.000 13.81 0.00 33.54 3.27
4334 20904 2.408050 CTGTACCAGCTGTTGTCTGAC 58.592 52.381 13.81 0.00 33.54 3.51
4335 20905 1.269569 TGTACCAGCTGTTGTCTGACG 60.270 52.381 13.81 0.00 33.54 4.35
4336 20906 0.319555 TACCAGCTGTTGTCTGACGC 60.320 55.000 13.81 0.31 33.54 5.19
4337 20907 1.301244 CCAGCTGTTGTCTGACGCT 60.301 57.895 13.81 2.79 33.54 5.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.547173 AGGAACTAGTGTAGTAGTACTGTATGT 58.453 37.037 13.29 2.09 38.26 2.29
1 2 8.961294 AGGAACTAGTGTAGTAGTACTGTATG 57.039 38.462 13.29 1.52 38.26 2.39
6 7 8.820831 TCAGTTAGGAACTAGTGTAGTAGTACT 58.179 37.037 8.14 8.14 44.25 2.73
14 15 9.925545 TGGTAATATCAGTTAGGAACTAGTGTA 57.074 33.333 0.00 0.00 44.25 2.90
15 16 8.834004 TGGTAATATCAGTTAGGAACTAGTGT 57.166 34.615 0.00 0.00 44.25 3.55
16 17 9.751542 CTTGGTAATATCAGTTAGGAACTAGTG 57.248 37.037 0.00 0.00 44.25 2.74
44 3744 7.527457 AGCTATTATTTTCAACGGACAAGAAC 58.473 34.615 0.00 0.00 0.00 3.01
91 3796 1.547372 CTCATTTTTGCACAGGGAGGG 59.453 52.381 0.00 0.00 0.00 4.30
92 3797 1.067354 GCTCATTTTTGCACAGGGAGG 60.067 52.381 0.00 0.00 0.00 4.30
93 3798 1.067354 GGCTCATTTTTGCACAGGGAG 60.067 52.381 0.00 0.00 0.00 4.30
94 3799 0.968405 GGCTCATTTTTGCACAGGGA 59.032 50.000 0.00 0.00 0.00 4.20
95 3800 0.037046 GGGCTCATTTTTGCACAGGG 60.037 55.000 0.00 0.00 32.02 4.45
112 3817 7.416964 TGAACAAATTAACCAATATCCAGGG 57.583 36.000 0.00 0.00 0.00 4.45
117 3828 9.921637 TGGAAGTTGAACAAATTAACCAATATC 57.078 29.630 0.00 0.00 0.00 1.63
181 3895 2.427453 CGGTCCATAGCAGTAGTTCTGT 59.573 50.000 0.00 0.00 45.23 3.41
225 4045 3.435671 GTCAACACATAGGTTAGGCACAC 59.564 47.826 0.00 0.00 0.00 3.82
245 4065 3.997021 CCTCCGCCATATAACATGAAGTC 59.003 47.826 0.00 0.00 0.00 3.01
261 4082 1.904990 AAGAAGCTCCTTCCCTCCGC 61.905 60.000 1.60 0.00 40.98 5.54
281 4106 5.982516 TCAACACATGTCCTGCAAATTAAAC 59.017 36.000 0.00 0.00 0.00 2.01
312 7999 7.554118 TGAAAAACAGGAGGCTCATATTTCTAG 59.446 37.037 22.86 7.14 0.00 2.43
324 8011 4.219288 AGACAATGATGAAAAACAGGAGGC 59.781 41.667 0.00 0.00 0.00 4.70
325 8012 5.972107 AGACAATGATGAAAAACAGGAGG 57.028 39.130 0.00 0.00 0.00 4.30
328 8015 8.870160 TGTTAAAGACAATGATGAAAAACAGG 57.130 30.769 0.00 0.00 34.69 4.00
335 8022 7.175467 AGCACTGATGTTAAAGACAATGATGAA 59.825 33.333 0.00 0.00 42.62 2.57
349 8036 3.125146 GCATCGTTCAAGCACTGATGTTA 59.875 43.478 2.89 0.00 38.87 2.41
440 8133 0.245539 CTGCAATGGCTTTGTCCCTG 59.754 55.000 13.79 0.00 41.91 4.45
481 8184 1.442520 CGGTGAGGCATTGCAAACG 60.443 57.895 11.39 6.14 0.00 3.60
577 8286 5.921408 GTGTCAATCTCATCGGATAGGTTAC 59.079 44.000 0.00 0.00 0.00 2.50
587 8296 5.535043 TGTCAAATGTGTCAATCTCATCG 57.465 39.130 0.00 0.00 31.09 3.84
598 8307 6.371809 ACTTCACGTAAATGTCAAATGTGT 57.628 33.333 0.00 0.00 33.00 3.72
658 8443 0.846693 AGAGATGGTGGGGCAATACC 59.153 55.000 0.00 0.00 37.48 2.73
684 8469 5.693104 CCTCAACAATGGTTTGATTCAACAG 59.307 40.000 0.00 0.00 34.21 3.16
699 8484 5.768164 ACCAGTTAACGATTTCCTCAACAAT 59.232 36.000 0.00 0.00 0.00 2.71
701 8486 4.710324 ACCAGTTAACGATTTCCTCAACA 58.290 39.130 0.00 0.00 0.00 3.33
702 8487 5.163884 GCTACCAGTTAACGATTTCCTCAAC 60.164 44.000 0.00 0.00 0.00 3.18
703 8488 4.933400 GCTACCAGTTAACGATTTCCTCAA 59.067 41.667 0.00 0.00 0.00 3.02
704 8489 4.222145 AGCTACCAGTTAACGATTTCCTCA 59.778 41.667 0.00 0.00 0.00 3.86
705 8490 4.567159 CAGCTACCAGTTAACGATTTCCTC 59.433 45.833 0.00 0.00 0.00 3.71
706 8491 4.504858 CAGCTACCAGTTAACGATTTCCT 58.495 43.478 0.00 0.00 0.00 3.36
707 8492 3.063588 GCAGCTACCAGTTAACGATTTCC 59.936 47.826 0.00 0.00 0.00 3.13
708 8493 3.933332 AGCAGCTACCAGTTAACGATTTC 59.067 43.478 0.00 0.00 0.00 2.17
709 8494 3.933332 GAGCAGCTACCAGTTAACGATTT 59.067 43.478 0.00 0.00 0.00 2.17
710 8495 3.522553 GAGCAGCTACCAGTTAACGATT 58.477 45.455 0.00 0.00 0.00 3.34
711 8496 2.479730 CGAGCAGCTACCAGTTAACGAT 60.480 50.000 0.00 0.00 0.00 3.73
712 8497 1.135489 CGAGCAGCTACCAGTTAACGA 60.135 52.381 0.00 0.00 0.00 3.85
713 8498 1.269166 CGAGCAGCTACCAGTTAACG 58.731 55.000 0.00 0.00 0.00 3.18
714 8499 1.067071 ACCGAGCAGCTACCAGTTAAC 60.067 52.381 0.00 0.00 0.00 2.01
715 8500 1.263356 ACCGAGCAGCTACCAGTTAA 58.737 50.000 0.00 0.00 0.00 2.01
716 8501 1.067142 CAACCGAGCAGCTACCAGTTA 60.067 52.381 0.00 0.00 0.00 2.24
717 8502 0.320771 CAACCGAGCAGCTACCAGTT 60.321 55.000 0.00 0.00 0.00 3.16
718 8503 1.293498 CAACCGAGCAGCTACCAGT 59.707 57.895 0.00 0.00 0.00 4.00
719 8504 1.448540 CCAACCGAGCAGCTACCAG 60.449 63.158 0.00 0.00 0.00 4.00
720 8505 2.662596 CCAACCGAGCAGCTACCA 59.337 61.111 0.00 0.00 0.00 3.25
721 8506 2.820037 GCCAACCGAGCAGCTACC 60.820 66.667 0.00 0.00 0.00 3.18
722 8507 2.103042 CAGCCAACCGAGCAGCTAC 61.103 63.158 0.00 0.00 33.33 3.58
723 8508 2.265739 CAGCCAACCGAGCAGCTA 59.734 61.111 0.00 0.00 33.33 3.32
724 8509 4.711949 CCAGCCAACCGAGCAGCT 62.712 66.667 0.00 0.00 35.52 4.24
726 8511 3.052082 CACCAGCCAACCGAGCAG 61.052 66.667 0.00 0.00 0.00 4.24
727 8512 3.535629 CTCACCAGCCAACCGAGCA 62.536 63.158 0.00 0.00 0.00 4.26
728 8513 2.167398 TACTCACCAGCCAACCGAGC 62.167 60.000 0.00 0.00 0.00 5.03
729 8514 0.108615 CTACTCACCAGCCAACCGAG 60.109 60.000 0.00 0.00 0.00 4.63
730 8515 1.541310 CCTACTCACCAGCCAACCGA 61.541 60.000 0.00 0.00 0.00 4.69
731 8516 1.079127 CCTACTCACCAGCCAACCG 60.079 63.158 0.00 0.00 0.00 4.44
732 8517 1.299976 CCCTACTCACCAGCCAACC 59.700 63.158 0.00 0.00 0.00 3.77
733 8518 1.198759 TCCCCTACTCACCAGCCAAC 61.199 60.000 0.00 0.00 0.00 3.77
734 8519 0.253160 ATCCCCTACTCACCAGCCAA 60.253 55.000 0.00 0.00 0.00 4.52
735 8520 0.253160 AATCCCCTACTCACCAGCCA 60.253 55.000 0.00 0.00 0.00 4.75
736 8521 1.802553 TAATCCCCTACTCACCAGCC 58.197 55.000 0.00 0.00 0.00 4.85
737 8522 3.555168 CGATTAATCCCCTACTCACCAGC 60.555 52.174 9.87 0.00 0.00 4.85
738 8523 3.641906 ACGATTAATCCCCTACTCACCAG 59.358 47.826 9.87 0.00 0.00 4.00
739 8524 3.640029 GACGATTAATCCCCTACTCACCA 59.360 47.826 9.87 0.00 0.00 4.17
740 8525 3.896272 AGACGATTAATCCCCTACTCACC 59.104 47.826 9.87 0.00 0.00 4.02
741 8526 6.645790 TTAGACGATTAATCCCCTACTCAC 57.354 41.667 9.87 0.00 0.00 3.51
742 8527 6.150641 CGATTAGACGATTAATCCCCTACTCA 59.849 42.308 9.87 0.00 36.93 3.41
743 8528 6.404513 CCGATTAGACGATTAATCCCCTACTC 60.405 46.154 9.87 12.18 36.93 2.59
744 8529 5.418209 CCGATTAGACGATTAATCCCCTACT 59.582 44.000 9.87 5.80 36.93 2.57
745 8530 5.648572 CCGATTAGACGATTAATCCCCTAC 58.351 45.833 9.87 1.21 36.93 3.18
746 8531 4.159135 GCCGATTAGACGATTAATCCCCTA 59.841 45.833 9.87 8.28 36.93 3.53
747 8532 3.056035 GCCGATTAGACGATTAATCCCCT 60.056 47.826 9.87 9.17 36.93 4.79
748 8533 3.259902 GCCGATTAGACGATTAATCCCC 58.740 50.000 9.87 2.16 36.93 4.81
749 8534 3.921677 TGCCGATTAGACGATTAATCCC 58.078 45.455 9.87 2.51 36.93 3.85
750 8535 4.989168 ACTTGCCGATTAGACGATTAATCC 59.011 41.667 9.87 0.00 36.93 3.01
751 8536 6.526566 AACTTGCCGATTAGACGATTAATC 57.473 37.500 5.30 5.30 36.92 1.75
752 8537 8.603242 ATTAACTTGCCGATTAGACGATTAAT 57.397 30.769 0.00 0.00 35.09 1.40
753 8538 7.096353 CGATTAACTTGCCGATTAGACGATTAA 60.096 37.037 0.00 0.00 35.09 1.40
754 8539 6.361481 CGATTAACTTGCCGATTAGACGATTA 59.639 38.462 0.00 0.00 35.09 1.75
755 8540 5.175126 CGATTAACTTGCCGATTAGACGATT 59.825 40.000 0.00 0.00 35.09 3.34
756 8541 4.680110 CGATTAACTTGCCGATTAGACGAT 59.320 41.667 0.00 0.00 35.09 3.73
757 8542 4.039703 CGATTAACTTGCCGATTAGACGA 58.960 43.478 0.00 0.00 35.09 4.20
758 8543 3.181774 CCGATTAACTTGCCGATTAGACG 59.818 47.826 0.00 0.00 0.00 4.18
759 8544 3.059800 GCCGATTAACTTGCCGATTAGAC 60.060 47.826 0.00 0.00 0.00 2.59
760 8545 3.128349 GCCGATTAACTTGCCGATTAGA 58.872 45.455 0.00 0.00 0.00 2.10
761 8546 2.223377 GGCCGATTAACTTGCCGATTAG 59.777 50.000 0.00 0.00 33.59 1.73
762 8547 2.215196 GGCCGATTAACTTGCCGATTA 58.785 47.619 0.00 0.00 33.59 1.75
763 8548 1.021968 GGCCGATTAACTTGCCGATT 58.978 50.000 0.00 0.00 33.59 3.34
764 8549 2.702847 GGCCGATTAACTTGCCGAT 58.297 52.632 0.00 0.00 33.59 4.18
765 8550 4.211986 GGCCGATTAACTTGCCGA 57.788 55.556 0.00 0.00 33.59 5.54
767 8552 2.959507 AAATGGCCGATTAACTTGCC 57.040 45.000 0.00 4.44 44.27 4.52
768 8553 4.675114 CGATTAAATGGCCGATTAACTTGC 59.325 41.667 13.26 5.13 0.00 4.01
769 8554 6.055231 TCGATTAAATGGCCGATTAACTTG 57.945 37.500 13.26 7.81 0.00 3.16
770 8555 6.877611 ATCGATTAAATGGCCGATTAACTT 57.122 33.333 13.26 1.56 38.42 2.66
771 8556 6.877611 AATCGATTAAATGGCCGATTAACT 57.122 33.333 9.39 5.32 45.98 2.24
803 8588 6.750963 CCGAGTAGCCTATAAACCGATAAATC 59.249 42.308 0.00 0.00 0.00 2.17
804 8589 6.210185 ACCGAGTAGCCTATAAACCGATAAAT 59.790 38.462 0.00 0.00 0.00 1.40
805 8590 5.536161 ACCGAGTAGCCTATAAACCGATAAA 59.464 40.000 0.00 0.00 0.00 1.40
806 8591 5.048504 CACCGAGTAGCCTATAAACCGATAA 60.049 44.000 0.00 0.00 0.00 1.75
807 8592 4.456911 CACCGAGTAGCCTATAAACCGATA 59.543 45.833 0.00 0.00 0.00 2.92
808 8593 3.255149 CACCGAGTAGCCTATAAACCGAT 59.745 47.826 0.00 0.00 0.00 4.18
809 8594 2.620115 CACCGAGTAGCCTATAAACCGA 59.380 50.000 0.00 0.00 0.00 4.69
810 8595 2.620115 TCACCGAGTAGCCTATAAACCG 59.380 50.000 0.00 0.00 0.00 4.44
811 8596 3.243670 GGTCACCGAGTAGCCTATAAACC 60.244 52.174 0.00 0.00 0.00 3.27
812 8597 3.243670 GGGTCACCGAGTAGCCTATAAAC 60.244 52.174 0.00 0.00 0.00 2.01
813 8598 2.961062 GGGTCACCGAGTAGCCTATAAA 59.039 50.000 0.00 0.00 0.00 1.40
814 8599 2.176364 AGGGTCACCGAGTAGCCTATAA 59.824 50.000 0.00 0.00 41.72 0.98
815 8600 1.779092 AGGGTCACCGAGTAGCCTATA 59.221 52.381 0.00 0.00 41.72 1.31
816 8601 0.556747 AGGGTCACCGAGTAGCCTAT 59.443 55.000 0.00 0.00 41.72 2.57
817 8602 1.133976 GTAGGGTCACCGAGTAGCCTA 60.134 57.143 0.00 0.00 43.24 3.93
818 8603 0.395448 GTAGGGTCACCGAGTAGCCT 60.395 60.000 6.78 6.78 45.33 4.58
819 8604 1.722636 CGTAGGGTCACCGAGTAGCC 61.723 65.000 0.00 0.00 43.47 3.93
820 8605 0.745845 TCGTAGGGTCACCGAGTAGC 60.746 60.000 0.00 0.00 43.47 3.58
821 8606 1.297664 CTCGTAGGGTCACCGAGTAG 58.702 60.000 0.00 0.00 42.26 2.57
822 8607 3.465990 CTCGTAGGGTCACCGAGTA 57.534 57.895 0.00 0.00 42.26 2.59
823 8608 4.315588 CTCGTAGGGTCACCGAGT 57.684 61.111 0.00 0.00 42.26 4.18
825 8610 0.107508 CCTACTCGTAGGGTCACCGA 60.108 60.000 14.08 0.00 46.96 4.69
826 8611 2.401967 CCTACTCGTAGGGTCACCG 58.598 63.158 14.08 0.00 46.96 4.94
834 8619 3.504906 TGCCGATTAATCCCTACTCGTAG 59.495 47.826 9.87 0.00 32.34 3.51
835 8620 3.489355 TGCCGATTAATCCCTACTCGTA 58.511 45.455 9.87 0.00 32.34 3.43
836 8621 2.313317 TGCCGATTAATCCCTACTCGT 58.687 47.619 9.87 0.00 32.34 4.18
837 8622 3.243771 ACTTGCCGATTAATCCCTACTCG 60.244 47.826 9.87 0.00 33.64 4.18
838 8623 4.338379 ACTTGCCGATTAATCCCTACTC 57.662 45.455 9.87 0.00 0.00 2.59
839 8624 4.772886 AACTTGCCGATTAATCCCTACT 57.227 40.909 9.87 0.00 0.00 2.57
840 8625 6.018180 CAGTTAACTTGCCGATTAATCCCTAC 60.018 42.308 5.07 0.00 0.00 3.18
841 8626 6.053005 CAGTTAACTTGCCGATTAATCCCTA 58.947 40.000 5.07 0.00 0.00 3.53
842 8627 4.881850 CAGTTAACTTGCCGATTAATCCCT 59.118 41.667 5.07 0.00 0.00 4.20
843 8628 4.036380 CCAGTTAACTTGCCGATTAATCCC 59.964 45.833 5.07 2.26 0.00 3.85
844 8629 4.638865 ACCAGTTAACTTGCCGATTAATCC 59.361 41.667 5.07 0.00 0.00 3.01
845 8630 5.813080 ACCAGTTAACTTGCCGATTAATC 57.187 39.130 5.07 5.30 0.00 1.75
846 8631 7.690952 TTAACCAGTTAACTTGCCGATTAAT 57.309 32.000 5.07 0.00 30.78 1.40
847 8632 7.413219 CGATTAACCAGTTAACTTGCCGATTAA 60.413 37.037 5.07 4.36 37.80 1.40
848 8633 6.036300 CGATTAACCAGTTAACTTGCCGATTA 59.964 38.462 5.07 0.00 37.80 1.75
849 8634 5.163794 CGATTAACCAGTTAACTTGCCGATT 60.164 40.000 5.07 0.00 37.80 3.34
850 8635 4.331717 CGATTAACCAGTTAACTTGCCGAT 59.668 41.667 5.07 0.00 37.80 4.18
851 8636 3.680937 CGATTAACCAGTTAACTTGCCGA 59.319 43.478 5.07 0.00 37.80 5.54
852 8637 3.181514 CCGATTAACCAGTTAACTTGCCG 60.182 47.826 5.07 3.31 37.80 5.69
853 8638 4.004982 TCCGATTAACCAGTTAACTTGCC 58.995 43.478 5.07 0.00 37.80 4.52
854 8639 5.353123 TCATCCGATTAACCAGTTAACTTGC 59.647 40.000 5.07 0.00 37.80 4.01
855 8640 6.978343 TCATCCGATTAACCAGTTAACTTG 57.022 37.500 5.07 5.14 37.80 3.16
856 8641 8.575649 AATTCATCCGATTAACCAGTTAACTT 57.424 30.769 5.07 0.00 37.80 2.66
857 8642 8.047310 AGAATTCATCCGATTAACCAGTTAACT 58.953 33.333 8.44 1.12 37.80 2.24
858 8643 8.209917 AGAATTCATCCGATTAACCAGTTAAC 57.790 34.615 8.44 0.00 37.80 2.01
859 8644 8.673711 CAAGAATTCATCCGATTAACCAGTTAA 58.326 33.333 8.44 5.51 39.12 2.01
860 8645 8.044309 TCAAGAATTCATCCGATTAACCAGTTA 58.956 33.333 8.44 0.00 0.00 2.24
861 8646 6.884295 TCAAGAATTCATCCGATTAACCAGTT 59.116 34.615 8.44 0.00 0.00 3.16
862 8647 6.414732 TCAAGAATTCATCCGATTAACCAGT 58.585 36.000 8.44 0.00 0.00 4.00
863 8648 6.925610 TCAAGAATTCATCCGATTAACCAG 57.074 37.500 8.44 0.00 0.00 4.00
864 8649 6.657117 TGTTCAAGAATTCATCCGATTAACCA 59.343 34.615 8.44 0.00 0.00 3.67
865 8650 7.083875 TGTTCAAGAATTCATCCGATTAACC 57.916 36.000 8.44 0.00 0.00 2.85
866 8651 7.189512 CCTGTTCAAGAATTCATCCGATTAAC 58.810 38.462 8.44 1.74 0.00 2.01
867 8652 6.318648 CCCTGTTCAAGAATTCATCCGATTAA 59.681 38.462 8.44 0.00 0.00 1.40
868 8653 5.822519 CCCTGTTCAAGAATTCATCCGATTA 59.177 40.000 8.44 0.00 0.00 1.75
869 8654 4.641989 CCCTGTTCAAGAATTCATCCGATT 59.358 41.667 8.44 0.00 0.00 3.34
870 8655 4.080356 TCCCTGTTCAAGAATTCATCCGAT 60.080 41.667 8.44 0.00 0.00 4.18
871 8656 3.263170 TCCCTGTTCAAGAATTCATCCGA 59.737 43.478 8.44 0.00 0.00 4.55
872 8657 3.609853 TCCCTGTTCAAGAATTCATCCG 58.390 45.455 8.44 0.00 0.00 4.18
873 8658 5.653769 TGATTCCCTGTTCAAGAATTCATCC 59.346 40.000 8.44 0.00 30.52 3.51
874 8659 6.764308 TGATTCCCTGTTCAAGAATTCATC 57.236 37.500 8.44 0.00 30.52 2.92
875 8660 7.015487 TGTTTGATTCCCTGTTCAAGAATTCAT 59.985 33.333 8.44 0.00 33.68 2.57
876 8661 6.323482 TGTTTGATTCCCTGTTCAAGAATTCA 59.677 34.615 8.44 0.00 33.68 2.57
877 8662 6.748132 TGTTTGATTCCCTGTTCAAGAATTC 58.252 36.000 0.00 0.00 33.68 2.17
878 8663 6.729690 TGTTTGATTCCCTGTTCAAGAATT 57.270 33.333 0.00 0.00 33.68 2.17
879 8664 6.239402 CCTTGTTTGATTCCCTGTTCAAGAAT 60.239 38.462 0.00 0.00 33.68 2.40
880 8665 5.068987 CCTTGTTTGATTCCCTGTTCAAGAA 59.931 40.000 0.00 0.00 33.68 2.52
881 8666 4.584325 CCTTGTTTGATTCCCTGTTCAAGA 59.416 41.667 0.00 0.00 33.68 3.02
882 8667 4.342092 ACCTTGTTTGATTCCCTGTTCAAG 59.658 41.667 0.00 0.00 33.68 3.02
883 8668 4.099266 CACCTTGTTTGATTCCCTGTTCAA 59.901 41.667 0.00 0.00 0.00 2.69
884 8669 3.636300 CACCTTGTTTGATTCCCTGTTCA 59.364 43.478 0.00 0.00 0.00 3.18
885 8670 3.552890 GCACCTTGTTTGATTCCCTGTTC 60.553 47.826 0.00 0.00 0.00 3.18
886 8671 2.365293 GCACCTTGTTTGATTCCCTGTT 59.635 45.455 0.00 0.00 0.00 3.16
887 8672 1.963515 GCACCTTGTTTGATTCCCTGT 59.036 47.619 0.00 0.00 0.00 4.00
888 8673 1.068333 CGCACCTTGTTTGATTCCCTG 60.068 52.381 0.00 0.00 0.00 4.45
889 8674 1.202879 TCGCACCTTGTTTGATTCCCT 60.203 47.619 0.00 0.00 0.00 4.20
890 8675 1.243902 TCGCACCTTGTTTGATTCCC 58.756 50.000 0.00 0.00 0.00 3.97
891 8676 3.049912 GTTTCGCACCTTGTTTGATTCC 58.950 45.455 0.00 0.00 0.00 3.01
892 8677 3.730715 CAGTTTCGCACCTTGTTTGATTC 59.269 43.478 0.00 0.00 0.00 2.52
893 8678 3.380004 TCAGTTTCGCACCTTGTTTGATT 59.620 39.130 0.00 0.00 0.00 2.57
894 8679 2.948979 TCAGTTTCGCACCTTGTTTGAT 59.051 40.909 0.00 0.00 0.00 2.57
895 8680 2.360844 TCAGTTTCGCACCTTGTTTGA 58.639 42.857 0.00 0.00 0.00 2.69
896 8681 2.842208 TCAGTTTCGCACCTTGTTTG 57.158 45.000 0.00 0.00 0.00 2.93
897 8682 4.359706 GAAATCAGTTTCGCACCTTGTTT 58.640 39.130 0.00 0.00 34.88 2.83
898 8683 3.964909 GAAATCAGTTTCGCACCTTGTT 58.035 40.909 0.00 0.00 34.88 2.83
899 8684 3.626028 GAAATCAGTTTCGCACCTTGT 57.374 42.857 0.00 0.00 34.88 3.16
919 8704 3.005367 ACAAGTTTAACCTGGAATTGCCG 59.995 43.478 0.00 0.00 40.66 5.69
972 8773 3.975168 ATGGTTACCGAACTAGCTTGT 57.025 42.857 0.00 0.00 35.74 3.16
975 8776 4.579753 GTCTCTATGGTTACCGAACTAGCT 59.420 45.833 0.00 0.00 35.74 3.32
986 8787 5.045942 TCCTTGTGCATTGTCTCTATGGTTA 60.046 40.000 0.00 0.00 0.00 2.85
988 8789 3.264193 TCCTTGTGCATTGTCTCTATGGT 59.736 43.478 0.00 0.00 0.00 3.55
990 8791 3.875727 CCTCCTTGTGCATTGTCTCTATG 59.124 47.826 0.00 0.00 0.00 2.23
993 8794 1.980765 TCCTCCTTGTGCATTGTCTCT 59.019 47.619 0.00 0.00 0.00 3.10
996 8797 1.457346 CCTCCTCCTTGTGCATTGTC 58.543 55.000 0.00 0.00 0.00 3.18
998 8799 0.609957 TGCCTCCTCCTTGTGCATTG 60.610 55.000 0.00 0.00 0.00 2.82
1046 8847 0.538584 TCTTGATCCATCAGCGCTGT 59.461 50.000 34.70 20.41 38.19 4.40
1050 8851 1.329906 GTGCTTCTTGATCCATCAGCG 59.670 52.381 0.00 0.00 38.19 5.18
1051 8852 1.329906 CGTGCTTCTTGATCCATCAGC 59.670 52.381 0.00 0.00 38.19 4.26
1062 8863 4.999950 GGATCATATTCATCCGTGCTTCTT 59.000 41.667 0.00 0.00 30.62 2.52
1063 8864 4.040829 TGGATCATATTCATCCGTGCTTCT 59.959 41.667 0.00 0.00 42.69 2.85
1064 8865 4.318332 TGGATCATATTCATCCGTGCTTC 58.682 43.478 0.00 0.00 42.69 3.86
1080 8881 4.466370 GGATACGGAGGATTACATGGATCA 59.534 45.833 11.84 0.00 0.00 2.92
1089 8890 2.832129 GCATGGAGGATACGGAGGATTA 59.168 50.000 0.00 0.00 46.39 1.75
1166 8970 6.592220 TCAAAAAGAAAAGTTGGTTAGTTGCC 59.408 34.615 0.00 0.00 0.00 4.52
1196 9004 9.841880 CAAGCATGATAAGATAGAAATTCCATG 57.158 33.333 0.00 0.00 33.92 3.66
1201 9009 9.962783 GAAAGCAAGCATGATAAGATAGAAATT 57.037 29.630 0.00 0.00 0.00 1.82
1219 9027 5.799827 AGAGCTATACTAGGGAAAGCAAG 57.200 43.478 10.13 0.00 35.63 4.01
1250 9058 0.951040 CACTGCAAACGGAGGGAGAC 60.951 60.000 0.00 0.00 0.00 3.36
1321 9526 0.616395 TAGGGATGCGTTCTGGGACA 60.616 55.000 0.00 0.00 0.00 4.02
1322 9527 0.539986 TTAGGGATGCGTTCTGGGAC 59.460 55.000 0.00 0.00 0.00 4.46
1375 9634 5.470098 CACACAGTACTGCAGGAAAAGTAAT 59.530 40.000 22.90 0.00 30.94 1.89
1393 9661 3.120546 GCATAAGTAGCACACACACACAG 60.121 47.826 0.00 0.00 0.00 3.66
1418 9686 9.855021 GCACTATAGGACAACAAAACAAAATAT 57.145 29.630 4.43 0.00 0.00 1.28
1419 9687 8.851145 TGCACTATAGGACAACAAAACAAAATA 58.149 29.630 4.43 0.00 0.00 1.40
1420 9688 7.721402 TGCACTATAGGACAACAAAACAAAAT 58.279 30.769 4.43 0.00 0.00 1.82
1480 9750 3.074412 TCAAAAGAGGTGAGGAAATCGC 58.926 45.455 0.00 0.00 37.73 4.58
1523 9795 8.783833 TTTATCTTGGAAGAGAAGATTCACTG 57.216 34.615 0.00 0.00 40.09 3.66
1613 9885 2.760799 GCATGCCCTGCCCATTCA 60.761 61.111 6.36 0.00 45.66 2.57
1642 9914 1.808945 CAAAGCCTCTGGTGTGATGAC 59.191 52.381 0.00 0.00 27.98 3.06
1650 9922 3.266772 TCATATGGTTCAAAGCCTCTGGT 59.733 43.478 2.13 0.00 0.00 4.00
1686 9958 3.957497 AGGCCACTTTGACACATTTAACA 59.043 39.130 5.01 0.00 0.00 2.41
1689 9961 3.320541 CCAAGGCCACTTTGACACATTTA 59.679 43.478 5.01 0.00 33.81 1.40
1747 10019 0.478072 TGGTTCATGCAGTTGGGACT 59.522 50.000 0.00 0.00 36.25 3.85
1938 10210 5.805994 GTGGTTAGGAAATAGACAGTCTTCG 59.194 44.000 8.80 0.00 0.00 3.79
1945 10217 3.512329 TGCTCGTGGTTAGGAAATAGACA 59.488 43.478 0.00 0.00 0.00 3.41
2049 10322 2.370849 TCTAAACTGTGAAGGGGTGGAC 59.629 50.000 0.00 0.00 0.00 4.02
2060 10333 7.602644 TGCTGGAGTAGTAAATTCTAAACTGTG 59.397 37.037 0.00 0.00 0.00 3.66
2140 10414 6.610830 TGGCAAATGGTGATGTAGGAATTTAT 59.389 34.615 0.00 0.00 0.00 1.40
2151 10425 2.291465 CCGACTATGGCAAATGGTGATG 59.709 50.000 0.00 0.00 0.00 3.07
2155 10429 1.559682 AGTCCGACTATGGCAAATGGT 59.440 47.619 0.00 0.00 0.00 3.55
2163 10505 5.579718 CACAGTAAACTAGTCCGACTATGG 58.420 45.833 8.73 1.42 29.08 2.74
2174 10516 5.769367 TGTCACTACAGCACAGTAAACTAG 58.231 41.667 0.00 0.00 0.00 2.57
2176 10518 4.665833 TGTCACTACAGCACAGTAAACT 57.334 40.909 0.00 0.00 0.00 2.66
2318 10660 1.807142 GGCAAGAAGGTAGTGCTGAAC 59.193 52.381 0.00 0.00 38.36 3.18
2320 10662 1.352083 AGGCAAGAAGGTAGTGCTGA 58.648 50.000 0.00 0.00 38.36 4.26
2353 10696 4.335315 CACACAACAAAAGCAGAGTCCTTA 59.665 41.667 0.00 0.00 0.00 2.69
2356 10699 2.423538 ACACACAACAAAAGCAGAGTCC 59.576 45.455 0.00 0.00 0.00 3.85
2362 10705 2.611473 CCACCAACACACAACAAAAGCA 60.611 45.455 0.00 0.00 0.00 3.91
2364 10707 3.311486 ACCACCAACACACAACAAAAG 57.689 42.857 0.00 0.00 0.00 2.27
2372 10715 4.705337 TCTACAAAAACCACCAACACAC 57.295 40.909 0.00 0.00 0.00 3.82
2433 10776 7.675619 TCCACAGCTCATCCAATAGATTATCTA 59.324 37.037 4.26 4.26 30.59 1.98
2461 10804 5.163612 GGCAAGCTTTCCCTCTTTTATGTAG 60.164 44.000 3.39 0.00 0.00 2.74
2504 10847 0.327259 ATCTGCTCTTGAGCTGCCAA 59.673 50.000 21.17 7.74 34.40 4.52
2529 10872 1.633774 TCTCTTGCGAGAAGTTCCCT 58.366 50.000 4.90 0.00 43.10 4.20
2620 10963 0.401738 CTTGCTGACCCTTCCCAGAA 59.598 55.000 0.00 0.00 32.37 3.02
2625 10968 0.251634 CTCCTCTTGCTGACCCTTCC 59.748 60.000 0.00 0.00 0.00 3.46
2640 11001 0.983378 AAGCCGTATCCTTGCCTCCT 60.983 55.000 0.00 0.00 0.00 3.69
2695 11056 7.994425 TGAATTAAGACATTCACCAGCTTTA 57.006 32.000 0.00 0.00 38.09 1.85
2756 11127 3.735240 TGCAATTTTTGTAAGAGCAAGCG 59.265 39.130 0.00 0.00 0.00 4.68
2789 11185 9.875708 AGGGATTACCAAAATGCAAATATACTA 57.124 29.630 0.00 0.00 43.89 1.82
2790 11186 8.782137 AGGGATTACCAAAATGCAAATATACT 57.218 30.769 0.00 0.00 43.89 2.12
2798 11198 8.004215 AGATAATGTAGGGATTACCAAAATGCA 58.996 33.333 0.00 0.00 43.89 3.96
2841 11241 9.376075 TGCAAAAATTTTGATCAGTGTTTCTAA 57.624 25.926 21.23 0.00 0.00 2.10
2863 11288 9.502091 GTGGGAACAGTATTAGATATATTGCAA 57.498 33.333 0.00 0.00 44.46 4.08
2865 11290 9.155975 CAGTGGGAACAGTATTAGATATATTGC 57.844 37.037 0.00 0.00 43.90 3.56
2867 11292 8.880244 TGCAGTGGGAACAGTATTAGATATATT 58.120 33.333 0.00 0.00 43.90 1.28
2868 11293 8.435931 TGCAGTGGGAACAGTATTAGATATAT 57.564 34.615 0.00 0.00 43.90 0.86
2872 11297 5.435686 TTGCAGTGGGAACAGTATTAGAT 57.564 39.130 0.00 0.00 43.90 1.98
2874 11299 7.624360 TTATTTGCAGTGGGAACAGTATTAG 57.376 36.000 0.00 0.00 43.90 1.73
2901 14639 8.466798 TCGTGATGACTAAGATATGACAGAAAA 58.533 33.333 0.00 0.00 0.00 2.29
2935 14678 7.300556 ACTTGTGAGATATATGTCATGAGCT 57.699 36.000 15.00 0.00 32.42 4.09
2971 14721 3.011818 TGCATGAAATACAGCACCTGAG 58.988 45.455 0.00 0.00 35.18 3.35
2972 14722 3.011818 CTGCATGAAATACAGCACCTGA 58.988 45.455 0.00 0.00 29.64 3.86
2980 14730 1.093972 CGGCACCTGCATGAAATACA 58.906 50.000 0.00 0.00 44.36 2.29
2999 14749 1.197721 CGTTCAGTGACCTCCAAATGC 59.802 52.381 0.00 0.00 0.00 3.56
3051 14801 9.440761 AATTTCTATCCATTCACTAGTAGGACT 57.559 33.333 1.45 0.00 0.00 3.85
3095 14845 6.579666 ATGCATACAAAACAGTCAGTGATT 57.420 33.333 0.00 0.00 0.00 2.57
3096 14846 6.654582 TGTATGCATACAAAACAGTCAGTGAT 59.345 34.615 32.21 0.00 40.08 3.06
3101 14851 8.450180 CAGTTATGTATGCATACAAAACAGTCA 58.550 33.333 36.12 15.39 45.40 3.41
3143 14925 7.539712 TCAAGAACAAGTGAAAGAACTAGTG 57.460 36.000 0.00 0.00 0.00 2.74
3145 14927 7.011857 AGCTTCAAGAACAAGTGAAAGAACTAG 59.988 37.037 0.00 0.00 33.52 2.57
3148 14930 5.741040 CAGCTTCAAGAACAAGTGAAAGAAC 59.259 40.000 0.00 0.00 33.52 3.01
3154 14936 1.949525 GGCAGCTTCAAGAACAAGTGA 59.050 47.619 0.00 0.00 0.00 3.41
3214 14996 7.175990 TCAATACACGCAGATACATACCAGATA 59.824 37.037 0.00 0.00 0.00 1.98
3231 15013 7.538334 TGAAAGAAATGCTTCAATCAATACACG 59.462 33.333 0.00 0.00 35.24 4.49
3309 15125 2.285083 TCCCTGTTTGTGTCACTTTCG 58.715 47.619 4.27 0.00 0.00 3.46
3330 16106 6.213600 TGGGTAGATAATCCATTTCTAGAGCC 59.786 42.308 0.00 0.00 0.00 4.70
3388 16164 5.824624 GCATCAGATCAATTCTTTGGACCTA 59.175 40.000 0.00 0.00 33.44 3.08
3390 16166 4.643784 AGCATCAGATCAATTCTTTGGACC 59.356 41.667 0.00 0.00 33.44 4.46
3454 16482 8.435982 TCATAATTTTGTTTTGAGTGGGGATTT 58.564 29.630 0.00 0.00 0.00 2.17
3455 16483 7.972301 TCATAATTTTGTTTTGAGTGGGGATT 58.028 30.769 0.00 0.00 0.00 3.01
3456 16484 7.235399 ACTCATAATTTTGTTTTGAGTGGGGAT 59.765 33.333 11.33 0.00 43.88 3.85
3457 16485 6.553100 ACTCATAATTTTGTTTTGAGTGGGGA 59.447 34.615 11.33 0.00 43.88 4.81
3458 16486 6.758254 ACTCATAATTTTGTTTTGAGTGGGG 58.242 36.000 11.33 0.00 43.88 4.96
3460 16488 9.965824 ACTTACTCATAATTTTGTTTTGAGTGG 57.034 29.630 17.97 14.04 44.85 4.00
3522 16554 9.277783 GTAACAATGCCTTGAGATATTAGATGT 57.722 33.333 8.84 0.00 36.20 3.06
3550 16582 6.831976 AGAAACATCTTGAGTGAAACCTACT 58.168 36.000 0.00 0.00 37.80 2.57
3614 16667 2.826725 TCTCGGTTTTCTCTTCCTCCTC 59.173 50.000 0.00 0.00 0.00 3.71
3649 16702 0.818296 GAAGCTTCTCCTGGCGAGTA 59.182 55.000 19.44 0.00 39.84 2.59
4172 20742 4.560128 TCTCAACTGATCCGAAGAAACTG 58.440 43.478 0.00 0.00 0.00 3.16
4173 20743 4.873746 TCTCAACTGATCCGAAGAAACT 57.126 40.909 0.00 0.00 0.00 2.66
4174 20744 5.467063 AGTTTCTCAACTGATCCGAAGAAAC 59.533 40.000 21.75 21.75 42.05 2.78
4175 20745 5.611374 AGTTTCTCAACTGATCCGAAGAAA 58.389 37.500 8.70 8.70 42.05 2.52
4176 20746 5.215252 AGTTTCTCAACTGATCCGAAGAA 57.785 39.130 0.00 0.00 42.05 2.52
4177 20747 4.873746 AGTTTCTCAACTGATCCGAAGA 57.126 40.909 0.00 0.00 42.05 2.87
4187 20757 6.040842 ACAACATAATTGGCAGTTTCTCAACT 59.959 34.615 0.00 0.00 44.72 3.16
4188 20758 6.215845 ACAACATAATTGGCAGTTTCTCAAC 58.784 36.000 0.00 0.00 0.00 3.18
4189 20759 6.403866 ACAACATAATTGGCAGTTTCTCAA 57.596 33.333 0.00 0.00 0.00 3.02
4190 20760 7.517614 TTACAACATAATTGGCAGTTTCTCA 57.482 32.000 0.00 0.00 0.00 3.27
4191 20761 7.328493 GGTTTACAACATAATTGGCAGTTTCTC 59.672 37.037 0.00 0.00 0.00 2.87
4192 20762 7.015195 AGGTTTACAACATAATTGGCAGTTTCT 59.985 33.333 0.00 0.00 0.00 2.52
4193 20763 7.151976 AGGTTTACAACATAATTGGCAGTTTC 58.848 34.615 0.00 0.00 0.00 2.78
4194 20764 7.061566 AGGTTTACAACATAATTGGCAGTTT 57.938 32.000 0.00 0.00 0.00 2.66
4195 20765 6.664428 AGGTTTACAACATAATTGGCAGTT 57.336 33.333 0.00 0.00 0.00 3.16
4196 20766 6.295067 GGAAGGTTTACAACATAATTGGCAGT 60.295 38.462 0.00 0.00 0.00 4.40
4197 20767 6.099341 GGAAGGTTTACAACATAATTGGCAG 58.901 40.000 0.00 0.00 0.00 4.85
4198 20768 5.046950 GGGAAGGTTTACAACATAATTGGCA 60.047 40.000 0.00 0.00 0.00 4.92
4199 20769 5.046950 TGGGAAGGTTTACAACATAATTGGC 60.047 40.000 0.00 0.00 0.00 4.52
4200 20770 6.597832 TGGGAAGGTTTACAACATAATTGG 57.402 37.500 0.00 0.00 0.00 3.16
4201 20771 7.096551 CCTTGGGAAGGTTTACAACATAATTG 58.903 38.462 0.00 0.00 43.95 2.32
4202 20772 7.239763 CCTTGGGAAGGTTTACAACATAATT 57.760 36.000 0.00 0.00 43.95 1.40
4203 20773 6.850752 CCTTGGGAAGGTTTACAACATAAT 57.149 37.500 0.00 0.00 43.95 1.28
4217 20787 4.670896 AAACAATGTGAACCTTGGGAAG 57.329 40.909 3.95 0.00 0.00 3.46
4218 20788 4.141824 GGAAAACAATGTGAACCTTGGGAA 60.142 41.667 3.95 0.00 0.00 3.97
4219 20789 3.386402 GGAAAACAATGTGAACCTTGGGA 59.614 43.478 3.95 0.00 0.00 4.37
4220 20790 3.494223 GGGAAAACAATGTGAACCTTGGG 60.494 47.826 3.95 0.00 0.00 4.12
4221 20791 3.133721 TGGGAAAACAATGTGAACCTTGG 59.866 43.478 3.95 0.00 0.00 3.61
4222 20792 4.119136 GTGGGAAAACAATGTGAACCTTG 58.881 43.478 0.00 0.00 0.00 3.61
4223 20793 3.772025 TGTGGGAAAACAATGTGAACCTT 59.228 39.130 0.00 0.00 0.00 3.50
4224 20794 3.370104 TGTGGGAAAACAATGTGAACCT 58.630 40.909 0.00 0.00 0.00 3.50
4225 20795 3.810310 TGTGGGAAAACAATGTGAACC 57.190 42.857 0.00 0.00 0.00 3.62
4226 20796 4.566360 CAGTTGTGGGAAAACAATGTGAAC 59.434 41.667 0.00 0.00 41.81 3.18
4227 20797 4.753233 CAGTTGTGGGAAAACAATGTGAA 58.247 39.130 0.00 0.00 41.81 3.18
4228 20798 3.430098 GCAGTTGTGGGAAAACAATGTGA 60.430 43.478 0.00 0.00 41.81 3.58
4229 20799 2.865551 GCAGTTGTGGGAAAACAATGTG 59.134 45.455 0.00 0.00 41.81 3.21
4230 20800 2.765699 AGCAGTTGTGGGAAAACAATGT 59.234 40.909 0.00 0.00 41.81 2.71
4231 20801 3.457610 AGCAGTTGTGGGAAAACAATG 57.542 42.857 0.00 0.00 41.81 2.82
4232 20802 4.486125 AAAGCAGTTGTGGGAAAACAAT 57.514 36.364 0.00 0.00 41.81 2.71
4233 20803 3.971245 AAAGCAGTTGTGGGAAAACAA 57.029 38.095 0.00 0.00 37.71 2.83
4234 20804 4.646945 TGATAAAGCAGTTGTGGGAAAACA 59.353 37.500 0.00 0.00 0.00 2.83
4235 20805 5.195001 TGATAAAGCAGTTGTGGGAAAAC 57.805 39.130 0.00 0.00 0.00 2.43
4236 20806 5.362430 AGTTGATAAAGCAGTTGTGGGAAAA 59.638 36.000 0.00 0.00 0.00 2.29
4237 20807 4.892934 AGTTGATAAAGCAGTTGTGGGAAA 59.107 37.500 0.00 0.00 0.00 3.13
4238 20808 4.469657 AGTTGATAAAGCAGTTGTGGGAA 58.530 39.130 0.00 0.00 0.00 3.97
4239 20809 4.072131 GAGTTGATAAAGCAGTTGTGGGA 58.928 43.478 0.00 0.00 0.00 4.37
4240 20810 4.074970 AGAGTTGATAAAGCAGTTGTGGG 58.925 43.478 0.00 0.00 0.00 4.61
4241 20811 5.695851 AAGAGTTGATAAAGCAGTTGTGG 57.304 39.130 0.00 0.00 0.00 4.17
4242 20812 5.400485 GCAAAGAGTTGATAAAGCAGTTGTG 59.600 40.000 0.00 0.00 36.83 3.33
4243 20813 5.300286 AGCAAAGAGTTGATAAAGCAGTTGT 59.700 36.000 0.00 0.00 36.83 3.32
4244 20814 5.628193 CAGCAAAGAGTTGATAAAGCAGTTG 59.372 40.000 0.00 0.00 36.83 3.16
4245 20815 5.300286 ACAGCAAAGAGTTGATAAAGCAGTT 59.700 36.000 0.00 0.00 36.83 3.16
4246 20816 4.823989 ACAGCAAAGAGTTGATAAAGCAGT 59.176 37.500 0.00 0.00 36.83 4.40
4247 20817 5.368256 ACAGCAAAGAGTTGATAAAGCAG 57.632 39.130 0.00 0.00 36.83 4.24
4248 20818 6.147821 GTCTACAGCAAAGAGTTGATAAAGCA 59.852 38.462 0.00 0.00 36.83 3.91
4249 20819 6.538444 GTCTACAGCAAAGAGTTGATAAAGC 58.462 40.000 0.00 0.00 36.83 3.51
4250 20820 6.366332 ACGTCTACAGCAAAGAGTTGATAAAG 59.634 38.462 0.00 0.00 36.83 1.85
4251 20821 6.220930 ACGTCTACAGCAAAGAGTTGATAAA 58.779 36.000 0.00 0.00 36.83 1.40
4252 20822 5.779922 ACGTCTACAGCAAAGAGTTGATAA 58.220 37.500 0.00 0.00 36.83 1.75
4253 20823 5.386958 ACGTCTACAGCAAAGAGTTGATA 57.613 39.130 0.00 0.00 36.83 2.15
4254 20824 4.258702 ACGTCTACAGCAAAGAGTTGAT 57.741 40.909 0.00 0.00 36.83 2.57
4255 20825 3.728076 ACGTCTACAGCAAAGAGTTGA 57.272 42.857 0.00 0.00 36.83 3.18
4256 20826 3.802139 TCAACGTCTACAGCAAAGAGTTG 59.198 43.478 0.00 13.11 35.61 3.16
4257 20827 4.054780 TCAACGTCTACAGCAAAGAGTT 57.945 40.909 0.00 0.00 0.00 3.01
4258 20828 3.728076 TCAACGTCTACAGCAAAGAGT 57.272 42.857 0.00 0.00 0.00 3.24
4259 20829 3.990469 ACATCAACGTCTACAGCAAAGAG 59.010 43.478 0.00 0.00 0.00 2.85
4260 20830 3.740832 CACATCAACGTCTACAGCAAAGA 59.259 43.478 0.00 0.00 0.00 2.52
4261 20831 3.494626 ACACATCAACGTCTACAGCAAAG 59.505 43.478 0.00 0.00 0.00 2.77
4262 20832 3.462982 ACACATCAACGTCTACAGCAAA 58.537 40.909 0.00 0.00 0.00 3.68
4263 20833 3.106242 ACACATCAACGTCTACAGCAA 57.894 42.857 0.00 0.00 0.00 3.91
4264 20834 2.812358 ACACATCAACGTCTACAGCA 57.188 45.000 0.00 0.00 0.00 4.41
4265 20835 3.247648 ACAAACACATCAACGTCTACAGC 59.752 43.478 0.00 0.00 0.00 4.40
4266 20836 4.761745 CACAAACACATCAACGTCTACAG 58.238 43.478 0.00 0.00 0.00 2.74
4267 20837 3.001838 GCACAAACACATCAACGTCTACA 59.998 43.478 0.00 0.00 0.00 2.74
4268 20838 3.541711 GCACAAACACATCAACGTCTAC 58.458 45.455 0.00 0.00 0.00 2.59
4269 20839 2.219903 CGCACAAACACATCAACGTCTA 59.780 45.455 0.00 0.00 0.00 2.59
4270 20840 1.003972 CGCACAAACACATCAACGTCT 60.004 47.619 0.00 0.00 0.00 4.18
4271 20841 1.004398 TCGCACAAACACATCAACGTC 60.004 47.619 0.00 0.00 0.00 4.34
4272 20842 1.010580 TCGCACAAACACATCAACGT 58.989 45.000 0.00 0.00 0.00 3.99
4273 20843 1.971284 CATCGCACAAACACATCAACG 59.029 47.619 0.00 0.00 0.00 4.10
4274 20844 2.318578 CCATCGCACAAACACATCAAC 58.681 47.619 0.00 0.00 0.00 3.18
4275 20845 1.335780 GCCATCGCACAAACACATCAA 60.336 47.619 0.00 0.00 34.03 2.57
4276 20846 0.240678 GCCATCGCACAAACACATCA 59.759 50.000 0.00 0.00 34.03 3.07
4277 20847 0.456653 GGCCATCGCACAAACACATC 60.457 55.000 0.00 0.00 36.38 3.06
4278 20848 1.177895 TGGCCATCGCACAAACACAT 61.178 50.000 0.00 0.00 36.38 3.21
4279 20849 1.825622 TGGCCATCGCACAAACACA 60.826 52.632 0.00 0.00 36.38 3.72
4280 20850 1.371635 GTGGCCATCGCACAAACAC 60.372 57.895 9.72 0.00 36.38 3.32
4281 20851 1.528076 AGTGGCCATCGCACAAACA 60.528 52.632 9.72 0.00 36.38 2.83
4282 20852 1.081242 CAGTGGCCATCGCACAAAC 60.081 57.895 9.72 0.00 36.38 2.93
4283 20853 2.918345 GCAGTGGCCATCGCACAAA 61.918 57.895 20.99 0.00 36.38 2.83
4284 20854 3.364441 GCAGTGGCCATCGCACAA 61.364 61.111 20.99 0.00 36.38 3.33
4285 20855 4.639906 TGCAGTGGCCATCGCACA 62.640 61.111 23.79 9.84 40.13 4.57
4286 20856 4.107051 GTGCAGTGGCCATCGCAC 62.107 66.667 33.44 33.44 46.85 5.34
4289 20859 2.360350 AAGGTGCAGTGGCCATCG 60.360 61.111 9.72 3.93 40.13 3.84
4290 20860 1.001641 AGAAGGTGCAGTGGCCATC 60.002 57.895 9.72 2.38 40.13 3.51
4291 20861 1.001641 GAGAAGGTGCAGTGGCCAT 60.002 57.895 9.72 0.00 40.13 4.40
4292 20862 2.401699 CTGAGAAGGTGCAGTGGCCA 62.402 60.000 0.00 0.00 40.13 5.36
4293 20863 1.673665 CTGAGAAGGTGCAGTGGCC 60.674 63.158 0.00 0.00 40.13 5.36
4294 20864 1.072159 ACTGAGAAGGTGCAGTGGC 59.928 57.895 0.00 0.00 43.26 5.01
4301 20871 1.344438 TGGTACAGCACTGAGAAGGTG 59.656 52.381 4.31 7.16 39.05 4.00
4302 20872 1.717032 TGGTACAGCACTGAGAAGGT 58.283 50.000 4.31 0.00 0.00 3.50
4315 20885 1.269569 CGTCAGACAACAGCTGGTACA 60.270 52.381 19.93 0.00 34.20 2.90
4316 20886 1.419374 CGTCAGACAACAGCTGGTAC 58.581 55.000 19.93 9.35 34.20 3.34
4317 20887 0.319555 GCGTCAGACAACAGCTGGTA 60.320 55.000 19.93 0.00 34.20 3.25
4318 20888 1.595382 GCGTCAGACAACAGCTGGT 60.595 57.895 19.93 9.19 34.20 4.00
4319 20889 1.301244 AGCGTCAGACAACAGCTGG 60.301 57.895 19.93 3.21 36.73 4.85
4320 20890 4.350620 AGCGTCAGACAACAGCTG 57.649 55.556 13.48 13.48 36.73 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.