Multiple sequence alignment - TraesCS1B01G056000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G056000 chr1B 100.000 2978 0 0 1 2978 39070658 39067681 0.000000e+00 5500.0
1 TraesCS1B01G056000 chr1D 91.581 1841 71 33 589 2387 22862929 22864727 0.000000e+00 2464.0
2 TraesCS1B01G056000 chr1D 89.734 526 47 7 2456 2978 22864891 22865412 0.000000e+00 665.0
3 TraesCS1B01G056000 chr1A 92.078 1641 69 33 605 2201 23856315 23857938 0.000000e+00 2254.0
4 TraesCS1B01G056000 chr1A 86.242 596 67 14 2390 2978 23858173 23858760 1.510000e-177 632.0
5 TraesCS1B01G056000 chr4A 82.680 485 72 10 1258 1734 103068712 103069192 1.280000e-113 420.0
6 TraesCS1B01G056000 chr4D 81.705 481 80 8 1258 1734 362131937 362131461 7.740000e-106 394.0
7 TraesCS1B01G056000 chr7A 76.119 469 93 12 1283 1734 195217977 195217511 8.300000e-56 228.0
8 TraesCS1B01G056000 chr6D 75.299 502 105 15 1244 1734 364227201 364227694 3.860000e-54 222.0
9 TraesCS1B01G056000 chr6D 85.542 83 9 1 536 618 105425801 105425880 1.900000e-12 84.2
10 TraesCS1B01G056000 chr6A 75.397 504 101 19 1244 1734 505247478 505246985 3.860000e-54 222.0
11 TraesCS1B01G056000 chr6B 75.647 464 97 12 1282 1734 549193609 549194067 1.800000e-52 217.0
12 TraesCS1B01G056000 chr2A 83.636 110 14 3 262 369 624445472 624445365 1.890000e-17 100.0
13 TraesCS1B01G056000 chr3A 94.444 54 1 2 2334 2387 715583634 715583685 6.840000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G056000 chr1B 39067681 39070658 2977 True 5500.0 5500 100.0000 1 2978 1 chr1B.!!$R1 2977
1 TraesCS1B01G056000 chr1D 22862929 22865412 2483 False 1564.5 2464 90.6575 589 2978 2 chr1D.!!$F1 2389
2 TraesCS1B01G056000 chr1A 23856315 23858760 2445 False 1443.0 2254 89.1600 605 2978 2 chr1A.!!$F1 2373

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.032017 ACTCGCTCCACCCCTAGATT 60.032 55.0 0.0 0.0 0.0 2.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 2059 1.490574 AAAGAGGGGGATCGAGAGTG 58.509 55.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.572167 TCACAATTATGTTGTGCAGAATCA 57.428 33.333 16.58 0.42 46.78 2.57
24 25 7.160547 TCACAATTATGTTGTGCAGAATCAT 57.839 32.000 16.58 8.03 46.78 2.45
25 26 7.030768 TCACAATTATGTTGTGCAGAATCATG 58.969 34.615 16.58 8.10 46.78 3.07
26 27 5.808540 ACAATTATGTTGTGCAGAATCATGC 59.191 36.000 16.46 0.00 37.98 4.06
27 28 6.572703 ACAATTATGTTGTGCAGAATCATGCA 60.573 34.615 16.46 0.00 45.28 3.96
34 35 1.887320 GCAGAATCATGCAACGTGTC 58.113 50.000 0.00 0.00 45.77 3.67
35 36 1.466360 GCAGAATCATGCAACGTGTCC 60.466 52.381 0.00 0.00 45.77 4.02
36 37 2.079158 CAGAATCATGCAACGTGTCCT 58.921 47.619 0.00 0.00 0.00 3.85
37 38 2.485426 CAGAATCATGCAACGTGTCCTT 59.515 45.455 0.00 0.00 0.00 3.36
38 39 2.744202 AGAATCATGCAACGTGTCCTTC 59.256 45.455 0.00 0.00 0.00 3.46
39 40 2.183478 ATCATGCAACGTGTCCTTCA 57.817 45.000 0.00 0.00 0.00 3.02
40 41 2.183478 TCATGCAACGTGTCCTTCAT 57.817 45.000 0.00 0.00 0.00 2.57
41 42 2.076100 TCATGCAACGTGTCCTTCATC 58.924 47.619 0.00 0.00 0.00 2.92
42 43 2.079158 CATGCAACGTGTCCTTCATCT 58.921 47.619 0.00 0.00 0.00 2.90
43 44 1.795768 TGCAACGTGTCCTTCATCTC 58.204 50.000 0.00 0.00 0.00 2.75
44 45 1.079503 GCAACGTGTCCTTCATCTCC 58.920 55.000 0.00 0.00 0.00 3.71
45 46 1.726853 CAACGTGTCCTTCATCTCCC 58.273 55.000 0.00 0.00 0.00 4.30
46 47 1.001974 CAACGTGTCCTTCATCTCCCA 59.998 52.381 0.00 0.00 0.00 4.37
47 48 1.573108 ACGTGTCCTTCATCTCCCAT 58.427 50.000 0.00 0.00 0.00 4.00
48 49 2.747177 ACGTGTCCTTCATCTCCCATA 58.253 47.619 0.00 0.00 0.00 2.74
49 50 3.309296 ACGTGTCCTTCATCTCCCATAT 58.691 45.455 0.00 0.00 0.00 1.78
50 51 3.711704 ACGTGTCCTTCATCTCCCATATT 59.288 43.478 0.00 0.00 0.00 1.28
51 52 4.060900 CGTGTCCTTCATCTCCCATATTG 58.939 47.826 0.00 0.00 0.00 1.90
52 53 4.443457 CGTGTCCTTCATCTCCCATATTGT 60.443 45.833 0.00 0.00 0.00 2.71
53 54 5.059833 GTGTCCTTCATCTCCCATATTGTC 58.940 45.833 0.00 0.00 0.00 3.18
54 55 4.971282 TGTCCTTCATCTCCCATATTGTCT 59.029 41.667 0.00 0.00 0.00 3.41
55 56 5.070981 TGTCCTTCATCTCCCATATTGTCTC 59.929 44.000 0.00 0.00 0.00 3.36
56 57 5.306678 GTCCTTCATCTCCCATATTGTCTCT 59.693 44.000 0.00 0.00 0.00 3.10
57 58 5.306419 TCCTTCATCTCCCATATTGTCTCTG 59.694 44.000 0.00 0.00 0.00 3.35
58 59 5.512749 CCTTCATCTCCCATATTGTCTCTGG 60.513 48.000 0.00 0.00 0.00 3.86
65 66 5.832539 CCCATATTGTCTCTGGGTCTATT 57.167 43.478 0.00 0.00 43.93 1.73
66 67 5.555017 CCCATATTGTCTCTGGGTCTATTG 58.445 45.833 0.00 0.00 43.93 1.90
67 68 5.072329 CCCATATTGTCTCTGGGTCTATTGT 59.928 44.000 0.00 0.00 43.93 2.71
68 69 6.409695 CCCATATTGTCTCTGGGTCTATTGTT 60.410 42.308 0.00 0.00 43.93 2.83
69 70 7.056635 CCATATTGTCTCTGGGTCTATTGTTT 58.943 38.462 0.00 0.00 0.00 2.83
70 71 7.012704 CCATATTGTCTCTGGGTCTATTGTTTG 59.987 40.741 0.00 0.00 0.00 2.93
71 72 4.286297 TGTCTCTGGGTCTATTGTTTGG 57.714 45.455 0.00 0.00 0.00 3.28
72 73 3.650942 TGTCTCTGGGTCTATTGTTTGGT 59.349 43.478 0.00 0.00 0.00 3.67
73 74 4.841813 TGTCTCTGGGTCTATTGTTTGGTA 59.158 41.667 0.00 0.00 0.00 3.25
74 75 5.046591 TGTCTCTGGGTCTATTGTTTGGTAG 60.047 44.000 0.00 0.00 0.00 3.18
75 76 4.469945 TCTCTGGGTCTATTGTTTGGTAGG 59.530 45.833 0.00 0.00 0.00 3.18
76 77 4.172807 TCTGGGTCTATTGTTTGGTAGGT 58.827 43.478 0.00 0.00 0.00 3.08
77 78 4.600111 TCTGGGTCTATTGTTTGGTAGGTT 59.400 41.667 0.00 0.00 0.00 3.50
78 79 5.073965 TCTGGGTCTATTGTTTGGTAGGTTT 59.926 40.000 0.00 0.00 0.00 3.27
79 80 5.707495 TGGGTCTATTGTTTGGTAGGTTTT 58.293 37.500 0.00 0.00 0.00 2.43
80 81 5.771165 TGGGTCTATTGTTTGGTAGGTTTTC 59.229 40.000 0.00 0.00 0.00 2.29
81 82 5.771165 GGGTCTATTGTTTGGTAGGTTTTCA 59.229 40.000 0.00 0.00 0.00 2.69
82 83 6.265876 GGGTCTATTGTTTGGTAGGTTTTCAA 59.734 38.462 0.00 0.00 0.00 2.69
83 84 7.201929 GGGTCTATTGTTTGGTAGGTTTTCAAA 60.202 37.037 0.00 0.00 0.00 2.69
84 85 7.650504 GGTCTATTGTTTGGTAGGTTTTCAAAC 59.349 37.037 10.17 10.17 45.94 2.93
95 96 9.186837 TGGTAGGTTTTCAAACAACTATAAACA 57.813 29.630 4.85 0.00 40.63 2.83
112 113 9.680315 ACTATAAACATACTATTTGACTCGCTC 57.320 33.333 0.00 0.00 0.00 5.03
113 114 7.948278 ATAAACATACTATTTGACTCGCTCC 57.052 36.000 0.00 0.00 0.00 4.70
114 115 5.339008 AACATACTATTTGACTCGCTCCA 57.661 39.130 0.00 0.00 0.00 3.86
115 116 4.683832 ACATACTATTTGACTCGCTCCAC 58.316 43.478 0.00 0.00 0.00 4.02
116 117 2.674796 ACTATTTGACTCGCTCCACC 57.325 50.000 0.00 0.00 0.00 4.61
117 118 1.207329 ACTATTTGACTCGCTCCACCC 59.793 52.381 0.00 0.00 0.00 4.61
118 119 0.539986 TATTTGACTCGCTCCACCCC 59.460 55.000 0.00 0.00 0.00 4.95
119 120 1.201429 ATTTGACTCGCTCCACCCCT 61.201 55.000 0.00 0.00 0.00 4.79
120 121 0.543410 TTTGACTCGCTCCACCCCTA 60.543 55.000 0.00 0.00 0.00 3.53
121 122 0.970937 TTGACTCGCTCCACCCCTAG 60.971 60.000 0.00 0.00 0.00 3.02
122 123 1.076923 GACTCGCTCCACCCCTAGA 60.077 63.158 0.00 0.00 0.00 2.43
123 124 0.468400 GACTCGCTCCACCCCTAGAT 60.468 60.000 0.00 0.00 0.00 1.98
124 125 0.032017 ACTCGCTCCACCCCTAGATT 60.032 55.000 0.00 0.00 0.00 2.40
125 126 1.123928 CTCGCTCCACCCCTAGATTT 58.876 55.000 0.00 0.00 0.00 2.17
126 127 2.317040 CTCGCTCCACCCCTAGATTTA 58.683 52.381 0.00 0.00 0.00 1.40
127 128 2.698797 CTCGCTCCACCCCTAGATTTAA 59.301 50.000 0.00 0.00 0.00 1.52
128 129 2.433239 TCGCTCCACCCCTAGATTTAAC 59.567 50.000 0.00 0.00 0.00 2.01
129 130 2.802057 CGCTCCACCCCTAGATTTAACG 60.802 54.545 0.00 0.00 0.00 3.18
130 131 2.835027 CTCCACCCCTAGATTTAACGC 58.165 52.381 0.00 0.00 0.00 4.84
131 132 2.434702 CTCCACCCCTAGATTTAACGCT 59.565 50.000 0.00 0.00 0.00 5.07
132 133 2.433239 TCCACCCCTAGATTTAACGCTC 59.567 50.000 0.00 0.00 0.00 5.03
133 134 2.470821 CACCCCTAGATTTAACGCTCG 58.529 52.381 0.00 0.00 0.00 5.03
134 135 1.202498 ACCCCTAGATTTAACGCTCGC 60.202 52.381 0.00 0.00 0.00 5.03
135 136 1.499049 CCCTAGATTTAACGCTCGCC 58.501 55.000 0.00 0.00 0.00 5.54
136 137 1.202486 CCCTAGATTTAACGCTCGCCA 60.202 52.381 0.00 0.00 0.00 5.69
137 138 2.128035 CCTAGATTTAACGCTCGCCAG 58.872 52.381 0.00 0.00 0.00 4.85
138 139 2.128035 CTAGATTTAACGCTCGCCAGG 58.872 52.381 0.00 0.00 0.00 4.45
139 140 0.462047 AGATTTAACGCTCGCCAGGG 60.462 55.000 0.00 0.00 38.57 4.45
140 141 1.436983 GATTTAACGCTCGCCAGGGG 61.437 60.000 0.00 0.00 36.88 4.79
141 142 1.906105 ATTTAACGCTCGCCAGGGGA 61.906 55.000 5.98 5.98 36.88 4.81
142 143 1.906105 TTTAACGCTCGCCAGGGGAT 61.906 55.000 6.68 0.00 36.88 3.85
143 144 1.906105 TTAACGCTCGCCAGGGGATT 61.906 55.000 6.68 1.32 36.88 3.01
144 145 2.306255 TAACGCTCGCCAGGGGATTC 62.306 60.000 6.68 1.44 36.88 2.52
145 146 4.918201 CGCTCGCCAGGGGATTCC 62.918 72.222 6.68 0.00 0.00 3.01
154 155 2.594592 GGGGATTCCCGGCATTCG 60.595 66.667 15.70 0.00 46.66 3.34
168 169 3.084070 GCATTCGGCCCAAATTAGAAG 57.916 47.619 0.00 0.00 36.11 2.85
169 170 2.427095 GCATTCGGCCCAAATTAGAAGT 59.573 45.455 0.00 0.00 36.11 3.01
170 171 3.489229 GCATTCGGCCCAAATTAGAAGTC 60.489 47.826 0.00 0.00 36.11 3.01
171 172 2.413310 TCGGCCCAAATTAGAAGTCC 57.587 50.000 0.00 0.00 0.00 3.85
172 173 1.064979 TCGGCCCAAATTAGAAGTCCC 60.065 52.381 0.00 0.00 0.00 4.46
173 174 1.776662 GGCCCAAATTAGAAGTCCCC 58.223 55.000 0.00 0.00 0.00 4.81
174 175 1.389555 GCCCAAATTAGAAGTCCCCG 58.610 55.000 0.00 0.00 0.00 5.73
175 176 1.340697 GCCCAAATTAGAAGTCCCCGT 60.341 52.381 0.00 0.00 0.00 5.28
176 177 2.092807 GCCCAAATTAGAAGTCCCCGTA 60.093 50.000 0.00 0.00 0.00 4.02
177 178 3.622953 GCCCAAATTAGAAGTCCCCGTAA 60.623 47.826 0.00 0.00 0.00 3.18
178 179 4.591929 CCCAAATTAGAAGTCCCCGTAAA 58.408 43.478 0.00 0.00 0.00 2.01
179 180 5.011586 CCCAAATTAGAAGTCCCCGTAAAA 58.988 41.667 0.00 0.00 0.00 1.52
180 181 5.124936 CCCAAATTAGAAGTCCCCGTAAAAG 59.875 44.000 0.00 0.00 0.00 2.27
181 182 5.941647 CCAAATTAGAAGTCCCCGTAAAAGA 59.058 40.000 0.00 0.00 0.00 2.52
182 183 6.602009 CCAAATTAGAAGTCCCCGTAAAAGAT 59.398 38.462 0.00 0.00 0.00 2.40
183 184 7.122204 CCAAATTAGAAGTCCCCGTAAAAGATT 59.878 37.037 0.00 0.00 0.00 2.40
184 185 8.520351 CAAATTAGAAGTCCCCGTAAAAGATTT 58.480 33.333 0.00 0.00 0.00 2.17
185 186 9.743581 AAATTAGAAGTCCCCGTAAAAGATTTA 57.256 29.630 0.00 0.00 0.00 1.40
186 187 8.959705 ATTAGAAGTCCCCGTAAAAGATTTAG 57.040 34.615 0.00 0.00 0.00 1.85
187 188 6.616237 AGAAGTCCCCGTAAAAGATTTAGA 57.384 37.500 0.00 0.00 0.00 2.10
188 189 7.012661 AGAAGTCCCCGTAAAAGATTTAGAA 57.987 36.000 0.00 0.00 0.00 2.10
189 190 7.104290 AGAAGTCCCCGTAAAAGATTTAGAAG 58.896 38.462 0.00 0.00 0.00 2.85
190 191 6.370186 AGTCCCCGTAAAAGATTTAGAAGT 57.630 37.500 0.00 0.00 0.00 3.01
191 192 6.171213 AGTCCCCGTAAAAGATTTAGAAGTG 58.829 40.000 0.00 0.00 0.00 3.16
192 193 5.936372 GTCCCCGTAAAAGATTTAGAAGTGT 59.064 40.000 0.00 0.00 0.00 3.55
193 194 6.429078 GTCCCCGTAAAAGATTTAGAAGTGTT 59.571 38.462 0.00 0.00 0.00 3.32
194 195 6.999871 TCCCCGTAAAAGATTTAGAAGTGTTT 59.000 34.615 0.00 0.00 0.00 2.83
195 196 7.040961 TCCCCGTAAAAGATTTAGAAGTGTTTG 60.041 37.037 0.00 0.00 0.00 2.93
196 197 7.040961 CCCCGTAAAAGATTTAGAAGTGTTTGA 60.041 37.037 0.00 0.00 0.00 2.69
197 198 8.347035 CCCGTAAAAGATTTAGAAGTGTTTGAA 58.653 33.333 0.00 0.00 0.00 2.69
198 199 9.893305 CCGTAAAAGATTTAGAAGTGTTTGAAT 57.107 29.630 0.00 0.00 0.00 2.57
209 210 6.725246 AGAAGTGTTTGAATAGTTTGTTCCG 58.275 36.000 0.00 0.00 0.00 4.30
210 211 6.540914 AGAAGTGTTTGAATAGTTTGTTCCGA 59.459 34.615 0.00 0.00 0.00 4.55
211 212 6.687081 AGTGTTTGAATAGTTTGTTCCGAA 57.313 33.333 0.00 0.00 0.00 4.30
212 213 6.492254 AGTGTTTGAATAGTTTGTTCCGAAC 58.508 36.000 4.18 4.18 0.00 3.95
213 214 6.094325 AGTGTTTGAATAGTTTGTTCCGAACA 59.906 34.615 9.99 9.99 40.21 3.18
214 215 6.915843 GTGTTTGAATAGTTTGTTCCGAACAT 59.084 34.615 14.64 3.16 41.79 2.71
215 216 7.434013 GTGTTTGAATAGTTTGTTCCGAACATT 59.566 33.333 14.64 5.84 41.79 2.71
216 217 7.976734 TGTTTGAATAGTTTGTTCCGAACATTT 59.023 29.630 14.64 6.39 41.79 2.32
217 218 7.922505 TTGAATAGTTTGTTCCGAACATTTG 57.077 32.000 14.64 0.00 41.79 2.32
218 219 7.265647 TGAATAGTTTGTTCCGAACATTTGA 57.734 32.000 14.64 0.00 41.79 2.69
219 220 7.708051 TGAATAGTTTGTTCCGAACATTTGAA 58.292 30.769 14.64 3.63 41.79 2.69
220 221 8.191446 TGAATAGTTTGTTCCGAACATTTGAAA 58.809 29.630 14.64 3.27 41.79 2.69
221 222 7.924103 ATAGTTTGTTCCGAACATTTGAAAC 57.076 32.000 14.64 14.32 41.79 2.78
222 223 4.796312 AGTTTGTTCCGAACATTTGAAACG 59.204 37.500 14.64 0.00 41.79 3.60
223 224 3.341857 TGTTCCGAACATTTGAAACGG 57.658 42.857 9.99 0.00 44.09 4.44
228 229 3.241701 CCGAACATTTGAAACGGAATGG 58.758 45.455 0.00 0.00 45.31 3.16
229 230 3.241701 CGAACATTTGAAACGGAATGGG 58.758 45.455 0.00 0.00 37.53 4.00
230 231 3.584834 GAACATTTGAAACGGAATGGGG 58.415 45.455 0.00 0.00 37.53 4.96
231 232 2.604139 ACATTTGAAACGGAATGGGGT 58.396 42.857 0.00 0.00 37.53 4.95
232 233 2.969262 ACATTTGAAACGGAATGGGGTT 59.031 40.909 0.00 0.00 37.53 4.11
233 234 4.153411 ACATTTGAAACGGAATGGGGTTA 58.847 39.130 0.00 0.00 37.53 2.85
234 235 4.219725 ACATTTGAAACGGAATGGGGTTAG 59.780 41.667 0.00 0.00 37.53 2.34
235 236 3.512219 TTGAAACGGAATGGGGTTAGT 57.488 42.857 0.00 0.00 0.00 2.24
236 237 2.785562 TGAAACGGAATGGGGTTAGTG 58.214 47.619 0.00 0.00 0.00 2.74
237 238 2.106857 TGAAACGGAATGGGGTTAGTGT 59.893 45.455 0.00 0.00 0.00 3.55
238 239 2.963599 AACGGAATGGGGTTAGTGTT 57.036 45.000 0.00 0.00 0.00 3.32
239 240 2.194201 ACGGAATGGGGTTAGTGTTG 57.806 50.000 0.00 0.00 0.00 3.33
240 241 1.271707 ACGGAATGGGGTTAGTGTTGG 60.272 52.381 0.00 0.00 0.00 3.77
241 242 1.003812 CGGAATGGGGTTAGTGTTGGA 59.996 52.381 0.00 0.00 0.00 3.53
242 243 2.723273 GGAATGGGGTTAGTGTTGGAG 58.277 52.381 0.00 0.00 0.00 3.86
243 244 2.307686 GGAATGGGGTTAGTGTTGGAGA 59.692 50.000 0.00 0.00 0.00 3.71
244 245 3.053619 GGAATGGGGTTAGTGTTGGAGAT 60.054 47.826 0.00 0.00 0.00 2.75
245 246 3.652057 ATGGGGTTAGTGTTGGAGATG 57.348 47.619 0.00 0.00 0.00 2.90
246 247 1.633432 TGGGGTTAGTGTTGGAGATGG 59.367 52.381 0.00 0.00 0.00 3.51
247 248 1.682087 GGGGTTAGTGTTGGAGATGGC 60.682 57.143 0.00 0.00 0.00 4.40
248 249 1.682087 GGGTTAGTGTTGGAGATGGCC 60.682 57.143 0.00 0.00 0.00 5.36
249 250 1.282157 GGTTAGTGTTGGAGATGGCCT 59.718 52.381 3.32 0.00 0.00 5.19
250 251 2.633488 GTTAGTGTTGGAGATGGCCTC 58.367 52.381 3.32 0.00 41.22 4.70
251 252 0.824109 TAGTGTTGGAGATGGCCTCG 59.176 55.000 3.32 0.00 42.89 4.63
252 253 1.194781 AGTGTTGGAGATGGCCTCGT 61.195 55.000 3.32 0.00 42.89 4.18
253 254 0.741221 GTGTTGGAGATGGCCTCGTC 60.741 60.000 3.32 0.00 42.89 4.20
254 255 1.519455 GTTGGAGATGGCCTCGTCG 60.519 63.158 3.32 0.00 42.89 5.12
255 256 2.721167 TTGGAGATGGCCTCGTCGG 61.721 63.158 3.32 0.00 42.89 4.79
256 257 2.833582 GGAGATGGCCTCGTCGGA 60.834 66.667 3.32 0.00 42.89 4.55
257 258 2.725008 GAGATGGCCTCGTCGGAG 59.275 66.667 3.32 0.00 40.14 4.63
258 259 1.824329 GAGATGGCCTCGTCGGAGA 60.824 63.158 3.32 0.00 43.27 3.71
259 260 1.791103 GAGATGGCCTCGTCGGAGAG 61.791 65.000 3.32 1.80 43.27 3.20
260 261 2.043852 ATGGCCTCGTCGGAGAGT 60.044 61.111 3.32 0.00 43.27 3.24
261 262 2.343163 GATGGCCTCGTCGGAGAGTG 62.343 65.000 3.32 1.53 43.27 3.51
262 263 3.827898 GGCCTCGTCGGAGAGTGG 61.828 72.222 0.00 1.94 43.27 4.00
263 264 3.827898 GCCTCGTCGGAGAGTGGG 61.828 72.222 7.17 0.00 43.27 4.61
264 265 2.361357 CCTCGTCGGAGAGTGGGT 60.361 66.667 7.17 0.00 43.27 4.51
265 266 1.077930 CCTCGTCGGAGAGTGGGTA 60.078 63.158 7.17 0.00 43.27 3.69
266 267 1.096386 CCTCGTCGGAGAGTGGGTAG 61.096 65.000 7.17 0.00 43.27 3.18
267 268 0.107800 CTCGTCGGAGAGTGGGTAGA 60.108 60.000 0.00 0.00 43.27 2.59
268 269 0.545171 TCGTCGGAGAGTGGGTAGAT 59.455 55.000 0.00 0.00 36.95 1.98
269 270 1.764723 TCGTCGGAGAGTGGGTAGATA 59.235 52.381 0.00 0.00 36.95 1.98
270 271 2.371179 TCGTCGGAGAGTGGGTAGATAT 59.629 50.000 0.00 0.00 36.95 1.63
271 272 2.743126 CGTCGGAGAGTGGGTAGATATC 59.257 54.545 0.00 0.00 36.95 1.63
272 273 3.752665 GTCGGAGAGTGGGTAGATATCA 58.247 50.000 5.32 0.00 36.95 2.15
273 274 3.754323 GTCGGAGAGTGGGTAGATATCAG 59.246 52.174 5.32 0.00 36.95 2.90
274 275 3.085533 CGGAGAGTGGGTAGATATCAGG 58.914 54.545 5.32 0.00 0.00 3.86
275 276 3.498841 CGGAGAGTGGGTAGATATCAGGT 60.499 52.174 5.32 0.00 0.00 4.00
276 277 3.829601 GGAGAGTGGGTAGATATCAGGTG 59.170 52.174 5.32 0.00 0.00 4.00
277 278 4.447908 GGAGAGTGGGTAGATATCAGGTGA 60.448 50.000 5.32 0.00 0.00 4.02
278 279 5.329399 GAGAGTGGGTAGATATCAGGTGAT 58.671 45.833 5.32 0.00 38.51 3.06
279 280 6.470456 AGAGTGGGTAGATATCAGGTGATA 57.530 41.667 5.32 2.19 40.85 2.15
280 281 6.249951 AGAGTGGGTAGATATCAGGTGATAC 58.750 44.000 5.32 0.00 39.57 2.24
281 282 5.334421 AGTGGGTAGATATCAGGTGATACC 58.666 45.833 5.32 6.75 39.57 2.73
282 283 4.158025 GTGGGTAGATATCAGGTGATACCG 59.842 50.000 5.32 0.00 44.90 4.02
283 284 3.130693 GGGTAGATATCAGGTGATACCGC 59.869 52.174 5.32 0.00 44.90 5.68
284 285 3.130693 GGTAGATATCAGGTGATACCGCC 59.869 52.174 5.32 0.00 44.90 6.13
285 286 2.180276 AGATATCAGGTGATACCGCCC 58.820 52.381 5.32 0.00 44.90 6.13
286 287 2.180276 GATATCAGGTGATACCGCCCT 58.820 52.381 1.72 0.00 44.90 5.19
287 288 2.097110 TATCAGGTGATACCGCCCTT 57.903 50.000 0.00 0.00 44.90 3.95
288 289 0.759346 ATCAGGTGATACCGCCCTTC 59.241 55.000 0.00 0.00 44.90 3.46
289 290 0.616395 TCAGGTGATACCGCCCTTCA 60.616 55.000 0.00 0.00 44.90 3.02
290 291 0.462047 CAGGTGATACCGCCCTTCAC 60.462 60.000 0.00 0.00 44.90 3.18
291 292 0.907704 AGGTGATACCGCCCTTCACA 60.908 55.000 4.85 0.00 44.90 3.58
292 293 0.180406 GGTGATACCGCCCTTCACAT 59.820 55.000 4.85 0.00 41.17 3.21
293 294 1.299541 GTGATACCGCCCTTCACATG 58.700 55.000 0.00 0.00 39.59 3.21
294 295 0.463654 TGATACCGCCCTTCACATGC 60.464 55.000 0.00 0.00 0.00 4.06
295 296 0.179045 GATACCGCCCTTCACATGCT 60.179 55.000 0.00 0.00 0.00 3.79
296 297 0.179045 ATACCGCCCTTCACATGCTC 60.179 55.000 0.00 0.00 0.00 4.26
297 298 1.264749 TACCGCCCTTCACATGCTCT 61.265 55.000 0.00 0.00 0.00 4.09
298 299 1.817099 CCGCCCTTCACATGCTCTC 60.817 63.158 0.00 0.00 0.00 3.20
299 300 1.078918 CGCCCTTCACATGCTCTCA 60.079 57.895 0.00 0.00 0.00 3.27
300 301 0.463295 CGCCCTTCACATGCTCTCAT 60.463 55.000 0.00 0.00 0.00 2.90
314 315 6.792326 CATGCTCTCATGCTCTAAAATTTGA 58.208 36.000 0.00 0.00 43.00 2.69
315 316 6.822667 TGCTCTCATGCTCTAAAATTTGAA 57.177 33.333 0.00 0.00 0.00 2.69
316 317 7.218228 TGCTCTCATGCTCTAAAATTTGAAA 57.782 32.000 0.00 0.00 0.00 2.69
317 318 7.660112 TGCTCTCATGCTCTAAAATTTGAAAA 58.340 30.769 0.00 0.00 0.00 2.29
318 319 8.308931 TGCTCTCATGCTCTAAAATTTGAAAAT 58.691 29.630 0.00 0.00 0.00 1.82
319 320 8.805688 GCTCTCATGCTCTAAAATTTGAAAATC 58.194 33.333 0.00 0.00 0.00 2.17
320 321 9.850628 CTCTCATGCTCTAAAATTTGAAAATCA 57.149 29.630 0.00 0.00 0.00 2.57
321 322 9.630098 TCTCATGCTCTAAAATTTGAAAATCAC 57.370 29.630 0.00 0.00 0.00 3.06
322 323 9.414295 CTCATGCTCTAAAATTTGAAAATCACA 57.586 29.630 0.00 0.00 0.00 3.58
323 324 9.932207 TCATGCTCTAAAATTTGAAAATCACAT 57.068 25.926 0.00 0.00 0.00 3.21
359 360 9.176460 TCAAATAATTCTGAGAATATGTGTGCA 57.824 29.630 8.30 0.00 0.00 4.57
360 361 9.961265 CAAATAATTCTGAGAATATGTGTGCAT 57.039 29.630 8.30 0.00 39.03 3.96
361 362 9.961265 AAATAATTCTGAGAATATGTGTGCATG 57.039 29.630 8.30 0.00 36.58 4.06
362 363 8.687292 ATAATTCTGAGAATATGTGTGCATGT 57.313 30.769 8.30 0.00 36.58 3.21
363 364 7.400599 AATTCTGAGAATATGTGTGCATGTT 57.599 32.000 8.30 0.00 38.79 2.71
364 365 6.426980 TTCTGAGAATATGTGTGCATGTTC 57.573 37.500 8.39 8.39 46.75 3.18
386 387 8.992073 TGTTCACATGACATATGTCTATAATGC 58.008 33.333 30.67 18.37 44.99 3.56
387 388 9.212641 GTTCACATGACATATGTCTATAATGCT 57.787 33.333 30.67 15.81 44.99 3.79
388 389 9.783081 TTCACATGACATATGTCTATAATGCTT 57.217 29.630 30.67 12.32 44.99 3.91
466 467 9.475620 TCTATAGTGAATAGTGTCAAAAGGAGA 57.524 33.333 0.00 0.00 38.99 3.71
467 468 9.522804 CTATAGTGAATAGTGTCAAAAGGAGAC 57.477 37.037 0.00 0.00 39.99 3.36
468 469 6.174720 AGTGAATAGTGTCAAAAGGAGACA 57.825 37.500 0.00 0.00 42.06 3.41
469 470 6.591935 AGTGAATAGTGTCAAAAGGAGACAA 58.408 36.000 0.00 0.00 46.50 3.18
470 471 7.054124 AGTGAATAGTGTCAAAAGGAGACAAA 58.946 34.615 0.00 0.00 46.50 2.83
471 472 7.556275 AGTGAATAGTGTCAAAAGGAGACAAAA 59.444 33.333 0.00 0.00 46.50 2.44
472 473 7.644157 GTGAATAGTGTCAAAAGGAGACAAAAC 59.356 37.037 0.00 0.00 46.50 2.43
473 474 7.338196 TGAATAGTGTCAAAAGGAGACAAAACA 59.662 33.333 0.00 0.00 46.50 2.83
474 475 7.823745 ATAGTGTCAAAAGGAGACAAAACAT 57.176 32.000 0.00 0.00 46.50 2.71
475 476 5.894807 AGTGTCAAAAGGAGACAAAACATG 58.105 37.500 0.00 0.00 46.50 3.21
476 477 5.652014 AGTGTCAAAAGGAGACAAAACATGA 59.348 36.000 0.00 0.00 46.50 3.07
477 478 6.152661 AGTGTCAAAAGGAGACAAAACATGAA 59.847 34.615 0.00 0.00 46.50 2.57
478 479 6.980397 GTGTCAAAAGGAGACAAAACATGAAT 59.020 34.615 0.00 0.00 46.50 2.57
479 480 8.134895 GTGTCAAAAGGAGACAAAACATGAATA 58.865 33.333 0.00 0.00 46.50 1.75
480 481 8.859090 TGTCAAAAGGAGACAAAACATGAATAT 58.141 29.630 0.00 0.00 42.57 1.28
481 482 9.696917 GTCAAAAGGAGACAAAACATGAATATT 57.303 29.630 0.00 0.00 36.06 1.28
482 483 9.912634 TCAAAAGGAGACAAAACATGAATATTC 57.087 29.630 8.60 8.60 0.00 1.75
483 484 9.918630 CAAAAGGAGACAAAACATGAATATTCT 57.081 29.630 16.24 0.00 0.00 2.40
485 486 8.868522 AAGGAGACAAAACATGAATATTCTCA 57.131 30.769 16.24 0.00 31.21 3.27
486 487 9.471702 AAGGAGACAAAACATGAATATTCTCAT 57.528 29.630 16.24 0.57 36.45 2.90
487 488 9.471702 AGGAGACAAAACATGAATATTCTCATT 57.528 29.630 16.24 5.17 33.66 2.57
496 497 9.479549 AACATGAATATTCTCATTTGTTAGGGT 57.520 29.630 16.24 0.00 33.66 4.34
497 498 9.479549 ACATGAATATTCTCATTTGTTAGGGTT 57.520 29.630 16.24 0.00 33.66 4.11
500 501 9.308000 TGAATATTCTCATTTGTTAGGGTTTGT 57.692 29.630 16.24 0.00 0.00 2.83
503 504 9.975218 ATATTCTCATTTGTTAGGGTTTGTAGT 57.025 29.630 0.00 0.00 0.00 2.73
504 505 7.739498 TTCTCATTTGTTAGGGTTTGTAGTC 57.261 36.000 0.00 0.00 0.00 2.59
505 506 6.833041 TCTCATTTGTTAGGGTTTGTAGTCA 58.167 36.000 0.00 0.00 0.00 3.41
506 507 6.708949 TCTCATTTGTTAGGGTTTGTAGTCAC 59.291 38.462 0.00 0.00 0.00 3.67
507 508 5.467399 TCATTTGTTAGGGTTTGTAGTCACG 59.533 40.000 0.00 0.00 0.00 4.35
508 509 4.405116 TTGTTAGGGTTTGTAGTCACGT 57.595 40.909 0.00 0.00 0.00 4.49
509 510 3.719924 TGTTAGGGTTTGTAGTCACGTG 58.280 45.455 9.94 9.94 0.00 4.49
510 511 3.132646 TGTTAGGGTTTGTAGTCACGTGT 59.867 43.478 16.51 0.00 0.00 4.49
511 512 2.521105 AGGGTTTGTAGTCACGTGTC 57.479 50.000 16.51 10.42 0.00 3.67
512 513 2.037144 AGGGTTTGTAGTCACGTGTCT 58.963 47.619 18.93 18.93 0.00 3.41
513 514 2.433239 AGGGTTTGTAGTCACGTGTCTT 59.567 45.455 20.04 7.44 0.00 3.01
514 515 2.542595 GGGTTTGTAGTCACGTGTCTTG 59.457 50.000 20.04 0.00 0.00 3.02
515 516 3.192466 GGTTTGTAGTCACGTGTCTTGT 58.808 45.455 20.04 0.00 0.00 3.16
516 517 3.000925 GGTTTGTAGTCACGTGTCTTGTG 59.999 47.826 20.04 0.00 38.70 3.33
517 518 3.786516 TTGTAGTCACGTGTCTTGTGA 57.213 42.857 20.04 0.00 43.68 3.58
518 519 3.786516 TGTAGTCACGTGTCTTGTGAA 57.213 42.857 20.04 0.00 46.99 3.18
519 520 4.112716 TGTAGTCACGTGTCTTGTGAAA 57.887 40.909 20.04 0.00 46.99 2.69
520 521 4.496360 TGTAGTCACGTGTCTTGTGAAAA 58.504 39.130 20.04 0.00 46.99 2.29
521 522 5.113383 TGTAGTCACGTGTCTTGTGAAAAT 58.887 37.500 20.04 0.00 46.99 1.82
522 523 5.583061 TGTAGTCACGTGTCTTGTGAAAATT 59.417 36.000 20.04 0.00 46.99 1.82
523 524 5.156804 AGTCACGTGTCTTGTGAAAATTC 57.843 39.130 16.51 0.00 46.99 2.17
524 525 4.634004 AGTCACGTGTCTTGTGAAAATTCA 59.366 37.500 16.51 0.00 46.99 2.57
525 526 5.123186 AGTCACGTGTCTTGTGAAAATTCAA 59.877 36.000 16.51 0.00 46.99 2.69
526 527 5.797934 GTCACGTGTCTTGTGAAAATTCAAA 59.202 36.000 16.51 0.00 46.99 2.69
527 528 6.306837 GTCACGTGTCTTGTGAAAATTCAAAA 59.693 34.615 16.51 0.00 46.99 2.44
528 529 6.863645 TCACGTGTCTTGTGAAAATTCAAAAA 59.136 30.769 16.51 0.00 42.99 1.94
529 530 7.543868 TCACGTGTCTTGTGAAAATTCAAAAAT 59.456 29.630 16.51 0.00 42.99 1.82
530 531 8.802856 CACGTGTCTTGTGAAAATTCAAAAATA 58.197 29.630 7.58 0.00 39.73 1.40
531 532 9.360093 ACGTGTCTTGTGAAAATTCAAAAATAA 57.640 25.926 0.00 0.00 39.21 1.40
707 714 7.542824 GGCAATCAAGTAGTATAGCTTAGCTAC 59.457 40.741 16.78 7.58 44.24 3.58
767 786 1.679977 GAAGATGCCAGCCAGCCAA 60.680 57.895 0.00 0.00 0.00 4.52
881 911 6.183361 CCCCTTCTATATTCTCCCAATCAACA 60.183 42.308 0.00 0.00 0.00 3.33
899 929 3.662759 ACACCCACAGAGAAAAAGGAA 57.337 42.857 0.00 0.00 0.00 3.36
989 1026 2.092861 CCCTCTAACGGTGAGAGAGAGA 60.093 54.545 21.90 0.00 42.69 3.10
990 1027 3.202906 CCTCTAACGGTGAGAGAGAGAG 58.797 54.545 21.90 3.13 42.69 3.20
991 1028 3.118555 CCTCTAACGGTGAGAGAGAGAGA 60.119 52.174 21.90 0.00 42.69 3.10
992 1029 4.119862 CTCTAACGGTGAGAGAGAGAGAG 58.880 52.174 16.32 0.00 42.69 3.20
993 1030 3.770388 TCTAACGGTGAGAGAGAGAGAGA 59.230 47.826 0.00 0.00 0.00 3.10
1417 1457 1.221840 GACATCATGGAGGCGGTGT 59.778 57.895 0.00 0.00 0.00 4.16
1716 1756 0.608640 CTACCTTCTCCAACGCCACT 59.391 55.000 0.00 0.00 0.00 4.00
1888 1931 2.165641 TCGTCGATGCCATTCTACAACT 59.834 45.455 0.00 0.00 0.00 3.16
1896 1939 1.164411 CATTCTACAACTTGCCGCCA 58.836 50.000 0.00 0.00 0.00 5.69
2009 2059 3.444805 AGCGAGCGAGGTGTCTCC 61.445 66.667 0.00 0.00 36.70 3.71
2030 2080 1.834263 ACTCTCGATCCCCCTCTTTTG 59.166 52.381 0.00 0.00 0.00 2.44
2031 2081 1.834263 CTCTCGATCCCCCTCTTTTGT 59.166 52.381 0.00 0.00 0.00 2.83
2046 2096 6.127338 CCCTCTTTTGTTTCTTGTTCCTTTCT 60.127 38.462 0.00 0.00 0.00 2.52
2068 2130 5.652014 TCTTTCTTTCTTTCCAGCTTCACAA 59.348 36.000 0.00 0.00 0.00 3.33
2080 2142 4.440525 CCAGCTTCACAAATCAGTGTTGTT 60.441 41.667 0.00 0.00 37.09 2.83
2081 2143 5.104374 CAGCTTCACAAATCAGTGTTGTTT 58.896 37.500 0.00 0.00 37.09 2.83
2082 2144 5.230726 CAGCTTCACAAATCAGTGTTGTTTC 59.769 40.000 0.00 0.00 37.09 2.78
2083 2145 5.126061 AGCTTCACAAATCAGTGTTGTTTCT 59.874 36.000 0.00 0.00 37.09 2.52
2084 2146 5.230726 GCTTCACAAATCAGTGTTGTTTCTG 59.769 40.000 0.00 0.00 37.09 3.02
2108 2170 5.257082 TCTCCTTGTTTTGTTTTAGGTGC 57.743 39.130 0.00 0.00 0.00 5.01
2165 2235 2.107950 TGCCAGTGCGCTTAATTACT 57.892 45.000 9.73 0.00 41.78 2.24
2166 2236 2.006888 TGCCAGTGCGCTTAATTACTC 58.993 47.619 9.73 0.00 41.78 2.59
2167 2237 2.006888 GCCAGTGCGCTTAATTACTCA 58.993 47.619 9.73 0.00 0.00 3.41
2225 2318 5.297547 TGAGTACAGCTTCGTTTCTTCAAT 58.702 37.500 0.00 0.00 0.00 2.57
2228 2321 4.670227 ACAGCTTCGTTTCTTCAATAGC 57.330 40.909 0.00 0.00 0.00 2.97
2234 2327 7.427606 CAGCTTCGTTTCTTCAATAGCTAATTG 59.572 37.037 0.00 3.69 45.47 2.32
2288 2382 4.318332 GTGTGTCATGTTCTCATCCAGAA 58.682 43.478 0.00 0.00 38.95 3.02
2291 2385 4.756642 GTGTCATGTTCTCATCCAGAAACA 59.243 41.667 0.00 0.00 43.10 2.83
2294 2388 4.756642 TCATGTTCTCATCCAGAAACACAC 59.243 41.667 0.00 0.00 43.10 3.82
2301 2395 6.950842 TCTCATCCAGAAACACACATCTAAT 58.049 36.000 0.00 0.00 0.00 1.73
2302 2396 8.078060 TCTCATCCAGAAACACACATCTAATA 57.922 34.615 0.00 0.00 0.00 0.98
2304 2398 7.619965 TCATCCAGAAACACACATCTAATACA 58.380 34.615 0.00 0.00 0.00 2.29
2306 2400 8.896744 CATCCAGAAACACACATCTAATACATT 58.103 33.333 0.00 0.00 0.00 2.71
2307 2401 8.267620 TCCAGAAACACACATCTAATACATTG 57.732 34.615 0.00 0.00 0.00 2.82
2332 2460 3.255725 TGATTTTACGCGGAGATTCGTT 58.744 40.909 12.47 0.00 39.79 3.85
2336 2464 2.350899 TACGCGGAGATTCGTTTGAA 57.649 45.000 12.47 0.00 39.79 2.69
2340 2468 2.840176 CGCGGAGATTCGTTTGAATTTG 59.160 45.455 0.00 0.00 44.79 2.32
2401 2562 5.357257 GGAGTTAGACGATTAGCAAATCCA 58.643 41.667 0.00 0.00 38.66 3.41
2409 2570 8.106247 AGACGATTAGCAAATCCAAAGTTTTA 57.894 30.769 0.00 0.00 38.66 1.52
2425 2586 7.862873 CCAAAGTTTTAAATAGCTGGCTATAGC 59.137 37.037 16.78 16.78 44.01 2.97
2426 2587 8.405531 CAAAGTTTTAAATAGCTGGCTATAGCA 58.594 33.333 25.53 11.21 46.07 3.49
2427 2588 8.697507 AAGTTTTAAATAGCTGGCTATAGCAT 57.302 30.769 25.53 7.82 46.07 3.79
2475 2698 2.644418 GCATTTGGCACAGCGTCA 59.356 55.556 0.00 0.00 42.39 4.35
2494 2717 2.742053 TCAATTTAGCGTGTCTTGAGGC 59.258 45.455 0.00 0.00 0.00 4.70
2507 2730 2.305635 TCTTGAGGCTGCCACTATTTGA 59.694 45.455 22.65 6.54 0.00 2.69
2532 2755 6.586082 ACATTGCTCGCTATTTAAAACTTTGG 59.414 34.615 0.00 0.00 0.00 3.28
2535 2758 5.239744 TGCTCGCTATTTAAAACTTTGGTCA 59.760 36.000 0.00 0.00 0.00 4.02
2651 2875 3.823330 CTACGTCTTCGCCCCGCT 61.823 66.667 0.00 0.00 41.18 5.52
2671 2897 0.526524 GGCCTGTTCATCTCTCGTCG 60.527 60.000 0.00 0.00 0.00 5.12
2681 2907 0.888619 TCTCTCGTCGAAACCATGCT 59.111 50.000 0.00 0.00 0.00 3.79
2683 2909 2.097629 TCTCTCGTCGAAACCATGCTAG 59.902 50.000 0.00 0.00 0.00 3.42
2685 2911 0.530744 TCGTCGAAACCATGCTAGCT 59.469 50.000 17.23 0.00 0.00 3.32
2687 2913 2.120232 CGTCGAAACCATGCTAGCTAG 58.880 52.381 16.84 16.84 0.00 3.42
2699 2925 3.477210 GCTAGCTAGCTACCCATTTGT 57.523 47.619 33.71 0.00 45.62 2.83
2747 2973 3.569250 TCGTCAACGATCATCAAGACA 57.431 42.857 0.22 0.00 44.22 3.41
2782 3008 5.942961 TGGTACACAAATTTCTTACCCTCA 58.057 37.500 13.33 0.00 32.63 3.86
2786 3012 9.016438 GGTACACAAATTTCTTACCCTCAAATA 57.984 33.333 0.00 0.00 0.00 1.40
2812 3038 4.019860 TGATCTTGTAGCTCAGCTTTTCCT 60.020 41.667 3.31 0.00 40.44 3.36
2830 3056 8.495148 GCTTTTCCTGTTGGTTATGTTTATTTG 58.505 33.333 0.00 0.00 34.23 2.32
2842 3068 7.310175 GGTTATGTTTATTTGTTTGGCTAGGGT 60.310 37.037 0.00 0.00 0.00 4.34
2844 3070 6.487299 TGTTTATTTGTTTGGCTAGGGTTT 57.513 33.333 0.00 0.00 0.00 3.27
2845 3071 7.598759 TGTTTATTTGTTTGGCTAGGGTTTA 57.401 32.000 0.00 0.00 0.00 2.01
2874 3101 0.165944 GTGTTCGGCGGATTGTCTTG 59.834 55.000 7.21 0.00 0.00 3.02
2912 3139 3.964688 TGAGACAGTGGTTTAGGACAGAA 59.035 43.478 0.00 0.00 0.00 3.02
2964 3193 6.461640 TGTTAGCTTCCTTGTTTAGTACCTC 58.538 40.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.525206 TGCATGATTCTGCACAACATAATTGTG 61.525 37.037 14.05 14.05 46.76 3.33
2 3 5.808540 GCATGATTCTGCACAACATAATTGT 59.191 36.000 0.00 0.00 41.87 2.71
3 4 5.808030 TGCATGATTCTGCACAACATAATTG 59.192 36.000 0.00 0.00 46.76 2.32
4 5 5.968254 TGCATGATTCTGCACAACATAATT 58.032 33.333 0.00 0.00 46.76 1.40
5 6 5.585820 TGCATGATTCTGCACAACATAAT 57.414 34.783 0.00 0.00 46.76 1.28
15 16 1.466360 GGACACGTTGCATGATTCTGC 60.466 52.381 0.00 0.00 42.62 4.26
16 17 2.079158 AGGACACGTTGCATGATTCTG 58.921 47.619 0.00 0.00 0.00 3.02
17 18 2.479566 AGGACACGTTGCATGATTCT 57.520 45.000 0.00 0.00 0.00 2.40
18 19 2.483877 TGAAGGACACGTTGCATGATTC 59.516 45.455 0.00 0.00 0.00 2.52
19 20 2.503331 TGAAGGACACGTTGCATGATT 58.497 42.857 0.00 0.00 0.00 2.57
20 21 2.183478 TGAAGGACACGTTGCATGAT 57.817 45.000 0.00 0.00 0.00 2.45
21 22 2.076100 GATGAAGGACACGTTGCATGA 58.924 47.619 0.00 0.00 0.00 3.07
22 23 2.079158 AGATGAAGGACACGTTGCATG 58.921 47.619 0.00 0.00 0.00 4.06
23 24 2.350522 GAGATGAAGGACACGTTGCAT 58.649 47.619 0.00 0.00 0.00 3.96
24 25 1.608025 GGAGATGAAGGACACGTTGCA 60.608 52.381 0.00 0.00 0.00 4.08
25 26 1.079503 GGAGATGAAGGACACGTTGC 58.920 55.000 0.00 0.00 0.00 4.17
26 27 1.001974 TGGGAGATGAAGGACACGTTG 59.998 52.381 0.00 0.00 0.00 4.10
27 28 1.348064 TGGGAGATGAAGGACACGTT 58.652 50.000 0.00 0.00 0.00 3.99
28 29 1.573108 ATGGGAGATGAAGGACACGT 58.427 50.000 0.00 0.00 0.00 4.49
29 30 4.060900 CAATATGGGAGATGAAGGACACG 58.939 47.826 0.00 0.00 0.00 4.49
30 31 5.041191 ACAATATGGGAGATGAAGGACAC 57.959 43.478 0.00 0.00 0.00 3.67
31 32 4.971282 AGACAATATGGGAGATGAAGGACA 59.029 41.667 0.00 0.00 0.00 4.02
32 33 5.306678 AGAGACAATATGGGAGATGAAGGAC 59.693 44.000 0.00 0.00 0.00 3.85
33 34 5.306419 CAGAGACAATATGGGAGATGAAGGA 59.694 44.000 0.00 0.00 0.00 3.36
34 35 5.512749 CCAGAGACAATATGGGAGATGAAGG 60.513 48.000 0.00 0.00 36.57 3.46
35 36 5.549347 CCAGAGACAATATGGGAGATGAAG 58.451 45.833 0.00 0.00 36.57 3.02
36 37 5.557576 CCAGAGACAATATGGGAGATGAA 57.442 43.478 0.00 0.00 36.57 2.57
44 45 6.179906 ACAATAGACCCAGAGACAATATGG 57.820 41.667 0.00 0.00 40.22 2.74
45 46 7.012704 CCAAACAATAGACCCAGAGACAATATG 59.987 40.741 0.00 0.00 0.00 1.78
46 47 7.056635 CCAAACAATAGACCCAGAGACAATAT 58.943 38.462 0.00 0.00 0.00 1.28
47 48 6.012858 ACCAAACAATAGACCCAGAGACAATA 60.013 38.462 0.00 0.00 0.00 1.90
48 49 5.222130 ACCAAACAATAGACCCAGAGACAAT 60.222 40.000 0.00 0.00 0.00 2.71
49 50 4.104102 ACCAAACAATAGACCCAGAGACAA 59.896 41.667 0.00 0.00 0.00 3.18
50 51 3.650942 ACCAAACAATAGACCCAGAGACA 59.349 43.478 0.00 0.00 0.00 3.41
51 52 4.287766 ACCAAACAATAGACCCAGAGAC 57.712 45.455 0.00 0.00 0.00 3.36
52 53 4.469945 CCTACCAAACAATAGACCCAGAGA 59.530 45.833 0.00 0.00 0.00 3.10
53 54 4.225267 ACCTACCAAACAATAGACCCAGAG 59.775 45.833 0.00 0.00 0.00 3.35
54 55 4.172807 ACCTACCAAACAATAGACCCAGA 58.827 43.478 0.00 0.00 0.00 3.86
55 56 4.569719 ACCTACCAAACAATAGACCCAG 57.430 45.455 0.00 0.00 0.00 4.45
56 57 5.327737 AAACCTACCAAACAATAGACCCA 57.672 39.130 0.00 0.00 0.00 4.51
57 58 5.771165 TGAAAACCTACCAAACAATAGACCC 59.229 40.000 0.00 0.00 0.00 4.46
58 59 6.887626 TGAAAACCTACCAAACAATAGACC 57.112 37.500 0.00 0.00 0.00 3.85
59 60 8.570096 GTTTGAAAACCTACCAAACAATAGAC 57.430 34.615 0.00 0.00 45.19 2.59
69 70 9.186837 TGTTTATAGTTGTTTGAAAACCTACCA 57.813 29.630 3.59 0.00 38.11 3.25
86 87 9.680315 GAGCGAGTCAAATAGTATGTTTATAGT 57.320 33.333 0.00 0.00 0.00 2.12
87 88 9.130312 GGAGCGAGTCAAATAGTATGTTTATAG 57.870 37.037 0.00 0.00 0.00 1.31
88 89 8.635328 TGGAGCGAGTCAAATAGTATGTTTATA 58.365 33.333 0.00 0.00 0.00 0.98
89 90 7.438459 GTGGAGCGAGTCAAATAGTATGTTTAT 59.562 37.037 0.00 0.00 0.00 1.40
90 91 6.755141 GTGGAGCGAGTCAAATAGTATGTTTA 59.245 38.462 0.00 0.00 0.00 2.01
91 92 5.581085 GTGGAGCGAGTCAAATAGTATGTTT 59.419 40.000 0.00 0.00 0.00 2.83
92 93 5.109903 GTGGAGCGAGTCAAATAGTATGTT 58.890 41.667 0.00 0.00 0.00 2.71
93 94 4.441634 GGTGGAGCGAGTCAAATAGTATGT 60.442 45.833 0.00 0.00 0.00 2.29
94 95 4.051922 GGTGGAGCGAGTCAAATAGTATG 58.948 47.826 0.00 0.00 0.00 2.39
95 96 3.069729 GGGTGGAGCGAGTCAAATAGTAT 59.930 47.826 0.00 0.00 0.00 2.12
96 97 2.429610 GGGTGGAGCGAGTCAAATAGTA 59.570 50.000 0.00 0.00 0.00 1.82
97 98 1.207329 GGGTGGAGCGAGTCAAATAGT 59.793 52.381 0.00 0.00 0.00 2.12
98 99 1.473434 GGGGTGGAGCGAGTCAAATAG 60.473 57.143 0.00 0.00 0.00 1.73
99 100 0.539986 GGGGTGGAGCGAGTCAAATA 59.460 55.000 0.00 0.00 0.00 1.40
100 101 1.201429 AGGGGTGGAGCGAGTCAAAT 61.201 55.000 0.00 0.00 0.00 2.32
101 102 0.543410 TAGGGGTGGAGCGAGTCAAA 60.543 55.000 0.00 0.00 0.00 2.69
102 103 0.970937 CTAGGGGTGGAGCGAGTCAA 60.971 60.000 0.00 0.00 0.00 3.18
103 104 1.379977 CTAGGGGTGGAGCGAGTCA 60.380 63.158 0.00 0.00 0.00 3.41
104 105 0.468400 ATCTAGGGGTGGAGCGAGTC 60.468 60.000 0.00 0.00 0.00 3.36
105 106 0.032017 AATCTAGGGGTGGAGCGAGT 60.032 55.000 0.00 0.00 0.00 4.18
106 107 1.123928 AAATCTAGGGGTGGAGCGAG 58.876 55.000 0.00 0.00 0.00 5.03
107 108 2.433239 GTTAAATCTAGGGGTGGAGCGA 59.567 50.000 0.00 0.00 0.00 4.93
108 109 2.802057 CGTTAAATCTAGGGGTGGAGCG 60.802 54.545 0.00 0.00 0.00 5.03
109 110 2.835027 CGTTAAATCTAGGGGTGGAGC 58.165 52.381 0.00 0.00 0.00 4.70
110 111 2.434702 AGCGTTAAATCTAGGGGTGGAG 59.565 50.000 0.00 0.00 0.00 3.86
111 112 2.433239 GAGCGTTAAATCTAGGGGTGGA 59.567 50.000 0.00 0.00 0.00 4.02
112 113 2.802057 CGAGCGTTAAATCTAGGGGTGG 60.802 54.545 0.00 0.00 0.00 4.61
113 114 2.470821 CGAGCGTTAAATCTAGGGGTG 58.529 52.381 0.00 0.00 0.00 4.61
114 115 1.202498 GCGAGCGTTAAATCTAGGGGT 60.202 52.381 0.00 0.00 0.00 4.95
115 116 1.499049 GCGAGCGTTAAATCTAGGGG 58.501 55.000 0.00 0.00 0.00 4.79
116 117 1.202486 TGGCGAGCGTTAAATCTAGGG 60.202 52.381 0.00 0.00 0.00 3.53
117 118 2.128035 CTGGCGAGCGTTAAATCTAGG 58.872 52.381 0.00 0.00 0.00 3.02
118 119 2.128035 CCTGGCGAGCGTTAAATCTAG 58.872 52.381 0.00 0.00 0.00 2.43
119 120 1.202486 CCCTGGCGAGCGTTAAATCTA 60.202 52.381 0.00 0.00 0.00 1.98
120 121 0.462047 CCCTGGCGAGCGTTAAATCT 60.462 55.000 0.00 0.00 0.00 2.40
121 122 1.436983 CCCCTGGCGAGCGTTAAATC 61.437 60.000 0.00 0.00 0.00 2.17
122 123 1.451387 CCCCTGGCGAGCGTTAAAT 60.451 57.895 0.00 0.00 0.00 1.40
123 124 1.906105 ATCCCCTGGCGAGCGTTAAA 61.906 55.000 0.00 0.00 0.00 1.52
124 125 1.906105 AATCCCCTGGCGAGCGTTAA 61.906 55.000 0.00 0.00 0.00 2.01
125 126 2.306255 GAATCCCCTGGCGAGCGTTA 62.306 60.000 0.00 0.00 0.00 3.18
126 127 3.682292 GAATCCCCTGGCGAGCGTT 62.682 63.158 0.00 0.00 0.00 4.84
127 128 4.162690 GAATCCCCTGGCGAGCGT 62.163 66.667 0.00 0.00 0.00 5.07
128 129 4.918201 GGAATCCCCTGGCGAGCG 62.918 72.222 0.00 0.00 0.00 5.03
148 149 2.427095 ACTTCTAATTTGGGCCGAATGC 59.573 45.455 19.76 0.00 40.16 3.56
149 150 3.066760 GGACTTCTAATTTGGGCCGAATG 59.933 47.826 19.76 8.51 0.00 2.67
150 151 3.288092 GGACTTCTAATTTGGGCCGAAT 58.712 45.455 13.51 13.51 0.00 3.34
151 152 2.619590 GGGACTTCTAATTTGGGCCGAA 60.620 50.000 9.06 9.06 0.00 4.30
152 153 1.064979 GGGACTTCTAATTTGGGCCGA 60.065 52.381 0.00 0.00 0.00 5.54
153 154 1.389555 GGGACTTCTAATTTGGGCCG 58.610 55.000 0.00 0.00 0.00 6.13
154 155 1.776662 GGGGACTTCTAATTTGGGCC 58.223 55.000 0.00 0.00 0.00 5.80
155 156 1.340697 ACGGGGACTTCTAATTTGGGC 60.341 52.381 0.00 0.00 0.00 5.36
156 157 2.801077 ACGGGGACTTCTAATTTGGG 57.199 50.000 0.00 0.00 0.00 4.12
157 158 5.941647 TCTTTTACGGGGACTTCTAATTTGG 59.058 40.000 0.00 0.00 0.00 3.28
158 159 7.625828 ATCTTTTACGGGGACTTCTAATTTG 57.374 36.000 0.00 0.00 0.00 2.32
159 160 8.645814 AAATCTTTTACGGGGACTTCTAATTT 57.354 30.769 0.00 0.00 0.00 1.82
160 161 9.392259 CTAAATCTTTTACGGGGACTTCTAATT 57.608 33.333 0.00 0.00 0.00 1.40
161 162 8.765517 TCTAAATCTTTTACGGGGACTTCTAAT 58.234 33.333 0.00 0.00 0.00 1.73
162 163 8.137745 TCTAAATCTTTTACGGGGACTTCTAA 57.862 34.615 0.00 0.00 0.00 2.10
163 164 7.722949 TCTAAATCTTTTACGGGGACTTCTA 57.277 36.000 0.00 0.00 0.00 2.10
164 165 6.616237 TCTAAATCTTTTACGGGGACTTCT 57.384 37.500 0.00 0.00 0.00 2.85
165 166 6.877855 ACTTCTAAATCTTTTACGGGGACTTC 59.122 38.462 0.00 0.00 0.00 3.01
166 167 6.653740 CACTTCTAAATCTTTTACGGGGACTT 59.346 38.462 0.00 0.00 0.00 3.01
167 168 6.171213 CACTTCTAAATCTTTTACGGGGACT 58.829 40.000 0.00 0.00 0.00 3.85
168 169 5.936372 ACACTTCTAAATCTTTTACGGGGAC 59.064 40.000 0.00 0.00 0.00 4.46
169 170 6.117975 ACACTTCTAAATCTTTTACGGGGA 57.882 37.500 0.00 0.00 0.00 4.81
170 171 6.812879 AACACTTCTAAATCTTTTACGGGG 57.187 37.500 0.00 0.00 0.00 5.73
171 172 7.867752 TCAAACACTTCTAAATCTTTTACGGG 58.132 34.615 0.00 0.00 0.00 5.28
172 173 9.893305 ATTCAAACACTTCTAAATCTTTTACGG 57.107 29.630 0.00 0.00 0.00 4.02
183 184 8.339714 CGGAACAAACTATTCAAACACTTCTAA 58.660 33.333 0.00 0.00 0.00 2.10
184 185 7.711772 TCGGAACAAACTATTCAAACACTTCTA 59.288 33.333 0.00 0.00 0.00 2.10
185 186 6.540914 TCGGAACAAACTATTCAAACACTTCT 59.459 34.615 0.00 0.00 0.00 2.85
186 187 6.721321 TCGGAACAAACTATTCAAACACTTC 58.279 36.000 0.00 0.00 0.00 3.01
187 188 6.687081 TCGGAACAAACTATTCAAACACTT 57.313 33.333 0.00 0.00 0.00 3.16
188 189 6.094325 TGTTCGGAACAAACTATTCAAACACT 59.906 34.615 20.52 0.00 38.72 3.55
189 190 6.259638 TGTTCGGAACAAACTATTCAAACAC 58.740 36.000 20.52 0.00 38.72 3.32
190 191 6.438259 TGTTCGGAACAAACTATTCAAACA 57.562 33.333 20.52 0.00 38.72 2.83
191 192 7.924103 AATGTTCGGAACAAACTATTCAAAC 57.076 32.000 25.64 0.00 45.86 2.93
192 193 8.191446 TCAAATGTTCGGAACAAACTATTCAAA 58.809 29.630 25.64 0.00 45.86 2.69
193 194 7.708051 TCAAATGTTCGGAACAAACTATTCAA 58.292 30.769 25.64 6.12 45.86 2.69
194 195 7.265647 TCAAATGTTCGGAACAAACTATTCA 57.734 32.000 25.64 1.18 45.86 2.57
195 196 8.476925 GTTTCAAATGTTCGGAACAAACTATTC 58.523 33.333 25.64 11.84 45.86 1.75
196 197 7.166804 CGTTTCAAATGTTCGGAACAAACTATT 59.833 33.333 25.64 13.22 45.86 1.73
197 198 6.635239 CGTTTCAAATGTTCGGAACAAACTAT 59.365 34.615 25.64 7.81 45.86 2.12
198 199 5.966503 CGTTTCAAATGTTCGGAACAAACTA 59.033 36.000 25.64 10.65 45.86 2.24
199 200 4.796312 CGTTTCAAATGTTCGGAACAAACT 59.204 37.500 25.64 11.74 45.86 2.66
200 201 4.027214 CCGTTTCAAATGTTCGGAACAAAC 60.027 41.667 25.64 21.52 45.86 2.93
201 202 4.106197 CCGTTTCAAATGTTCGGAACAAA 58.894 39.130 25.64 13.57 45.86 2.83
202 203 3.377485 TCCGTTTCAAATGTTCGGAACAA 59.623 39.130 25.64 8.18 45.86 2.83
203 204 2.943690 TCCGTTTCAAATGTTCGGAACA 59.056 40.909 24.32 24.32 45.52 3.18
204 205 3.612472 TCCGTTTCAAATGTTCGGAAC 57.388 42.857 13.86 13.86 45.52 3.62
206 207 3.057876 CCATTCCGTTTCAAATGTTCGGA 60.058 43.478 0.00 0.00 46.54 4.55
207 208 3.241701 CCATTCCGTTTCAAATGTTCGG 58.758 45.455 0.00 0.00 42.12 4.30
208 209 3.241701 CCCATTCCGTTTCAAATGTTCG 58.758 45.455 0.00 0.00 32.20 3.95
209 210 3.006430 ACCCCATTCCGTTTCAAATGTTC 59.994 43.478 0.00 0.00 32.20 3.18
210 211 2.969262 ACCCCATTCCGTTTCAAATGTT 59.031 40.909 0.00 0.00 32.20 2.71
211 212 2.604139 ACCCCATTCCGTTTCAAATGT 58.396 42.857 0.00 0.00 32.20 2.71
212 213 3.676291 AACCCCATTCCGTTTCAAATG 57.324 42.857 0.00 0.00 33.57 2.32
213 214 4.219725 CACTAACCCCATTCCGTTTCAAAT 59.780 41.667 0.00 0.00 0.00 2.32
214 215 3.570550 CACTAACCCCATTCCGTTTCAAA 59.429 43.478 0.00 0.00 0.00 2.69
215 216 3.150767 CACTAACCCCATTCCGTTTCAA 58.849 45.455 0.00 0.00 0.00 2.69
216 217 2.106857 ACACTAACCCCATTCCGTTTCA 59.893 45.455 0.00 0.00 0.00 2.69
217 218 2.786777 ACACTAACCCCATTCCGTTTC 58.213 47.619 0.00 0.00 0.00 2.78
218 219 2.888414 CAACACTAACCCCATTCCGTTT 59.112 45.455 0.00 0.00 0.00 3.60
219 220 2.510613 CAACACTAACCCCATTCCGTT 58.489 47.619 0.00 0.00 0.00 4.44
220 221 1.271707 CCAACACTAACCCCATTCCGT 60.272 52.381 0.00 0.00 0.00 4.69
221 222 1.003812 TCCAACACTAACCCCATTCCG 59.996 52.381 0.00 0.00 0.00 4.30
222 223 2.307686 TCTCCAACACTAACCCCATTCC 59.692 50.000 0.00 0.00 0.00 3.01
223 224 3.713826 TCTCCAACACTAACCCCATTC 57.286 47.619 0.00 0.00 0.00 2.67
224 225 3.309121 CCATCTCCAACACTAACCCCATT 60.309 47.826 0.00 0.00 0.00 3.16
225 226 2.242196 CCATCTCCAACACTAACCCCAT 59.758 50.000 0.00 0.00 0.00 4.00
226 227 1.633432 CCATCTCCAACACTAACCCCA 59.367 52.381 0.00 0.00 0.00 4.96
227 228 1.682087 GCCATCTCCAACACTAACCCC 60.682 57.143 0.00 0.00 0.00 4.95
228 229 1.682087 GGCCATCTCCAACACTAACCC 60.682 57.143 0.00 0.00 0.00 4.11
229 230 1.282157 AGGCCATCTCCAACACTAACC 59.718 52.381 5.01 0.00 0.00 2.85
230 231 2.633488 GAGGCCATCTCCAACACTAAC 58.367 52.381 5.01 0.00 36.52 2.34
231 232 1.207089 CGAGGCCATCTCCAACACTAA 59.793 52.381 5.01 0.00 39.30 2.24
232 233 0.824109 CGAGGCCATCTCCAACACTA 59.176 55.000 5.01 0.00 39.30 2.74
233 234 1.194781 ACGAGGCCATCTCCAACACT 61.195 55.000 5.01 0.00 39.30 3.55
234 235 0.741221 GACGAGGCCATCTCCAACAC 60.741 60.000 5.01 0.00 39.30 3.32
235 236 1.596934 GACGAGGCCATCTCCAACA 59.403 57.895 5.01 0.00 39.30 3.33
236 237 1.519455 CGACGAGGCCATCTCCAAC 60.519 63.158 5.01 0.00 39.30 3.77
237 238 2.721167 CCGACGAGGCCATCTCCAA 61.721 63.158 5.01 0.00 39.30 3.53
238 239 3.147595 CCGACGAGGCCATCTCCA 61.148 66.667 5.01 0.00 39.30 3.86
239 240 2.833582 TCCGACGAGGCCATCTCC 60.834 66.667 5.01 0.00 39.30 3.71
240 241 1.791103 CTCTCCGACGAGGCCATCTC 61.791 65.000 5.01 0.00 40.77 2.75
241 242 1.826054 CTCTCCGACGAGGCCATCT 60.826 63.158 5.01 0.00 40.77 2.90
242 243 2.122167 ACTCTCCGACGAGGCCATC 61.122 63.158 5.01 0.00 40.77 3.51
243 244 2.043852 ACTCTCCGACGAGGCCAT 60.044 61.111 5.01 0.00 40.77 4.40
244 245 3.062466 CACTCTCCGACGAGGCCA 61.062 66.667 5.01 0.00 40.77 5.36
245 246 3.827898 CCACTCTCCGACGAGGCC 61.828 72.222 0.00 0.00 40.77 5.19
246 247 3.827898 CCCACTCTCCGACGAGGC 61.828 72.222 0.00 0.00 40.77 4.70
247 248 1.077930 TACCCACTCTCCGACGAGG 60.078 63.158 0.00 0.00 42.97 4.63
248 249 0.107800 TCTACCCACTCTCCGACGAG 60.108 60.000 0.00 0.00 37.48 4.18
249 250 0.545171 ATCTACCCACTCTCCGACGA 59.455 55.000 0.00 0.00 0.00 4.20
250 251 2.251409 TATCTACCCACTCTCCGACG 57.749 55.000 0.00 0.00 0.00 5.12
251 252 3.752665 TGATATCTACCCACTCTCCGAC 58.247 50.000 3.98 0.00 0.00 4.79
252 253 3.244946 CCTGATATCTACCCACTCTCCGA 60.245 52.174 3.98 0.00 0.00 4.55
253 254 3.085533 CCTGATATCTACCCACTCTCCG 58.914 54.545 3.98 0.00 0.00 4.63
254 255 3.829601 CACCTGATATCTACCCACTCTCC 59.170 52.174 3.98 0.00 0.00 3.71
255 256 4.730966 TCACCTGATATCTACCCACTCTC 58.269 47.826 3.98 0.00 0.00 3.20
256 257 4.816048 TCACCTGATATCTACCCACTCT 57.184 45.455 3.98 0.00 0.00 3.24
257 258 5.419471 GGTATCACCTGATATCTACCCACTC 59.581 48.000 3.98 0.00 39.03 3.51
258 259 5.334421 GGTATCACCTGATATCTACCCACT 58.666 45.833 3.98 0.00 39.03 4.00
259 260 4.158025 CGGTATCACCTGATATCTACCCAC 59.842 50.000 3.98 0.00 39.03 4.61
260 261 4.341487 CGGTATCACCTGATATCTACCCA 58.659 47.826 3.98 0.00 39.03 4.51
261 262 3.130693 GCGGTATCACCTGATATCTACCC 59.869 52.174 3.98 0.00 39.03 3.69
262 263 3.130693 GGCGGTATCACCTGATATCTACC 59.869 52.174 3.98 5.52 39.03 3.18
263 264 3.130693 GGGCGGTATCACCTGATATCTAC 59.869 52.174 3.98 0.00 39.03 2.59
264 265 3.011369 AGGGCGGTATCACCTGATATCTA 59.989 47.826 3.98 0.00 39.03 1.98
265 266 2.180276 GGGCGGTATCACCTGATATCT 58.820 52.381 3.98 0.00 39.03 1.98
266 267 2.180276 AGGGCGGTATCACCTGATATC 58.820 52.381 0.00 0.00 39.03 1.63
267 268 2.327325 AGGGCGGTATCACCTGATAT 57.673 50.000 0.00 0.00 39.03 1.63
268 269 1.968493 GAAGGGCGGTATCACCTGATA 59.032 52.381 0.00 0.00 35.66 2.15
269 270 0.759346 GAAGGGCGGTATCACCTGAT 59.241 55.000 0.00 0.00 35.66 2.90
270 271 0.616395 TGAAGGGCGGTATCACCTGA 60.616 55.000 0.00 0.00 35.66 3.86
271 272 0.462047 GTGAAGGGCGGTATCACCTG 60.462 60.000 0.00 0.00 37.97 4.00
272 273 0.907704 TGTGAAGGGCGGTATCACCT 60.908 55.000 3.01 0.00 42.12 4.00
273 274 0.180406 ATGTGAAGGGCGGTATCACC 59.820 55.000 3.01 0.00 42.12 4.02
274 275 1.299541 CATGTGAAGGGCGGTATCAC 58.700 55.000 0.00 0.00 42.90 3.06
275 276 0.463654 GCATGTGAAGGGCGGTATCA 60.464 55.000 0.00 0.00 0.00 2.15
276 277 0.179045 AGCATGTGAAGGGCGGTATC 60.179 55.000 0.00 0.00 0.00 2.24
277 278 0.179045 GAGCATGTGAAGGGCGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
278 279 1.220749 GAGCATGTGAAGGGCGGTA 59.779 57.895 0.00 0.00 0.00 4.02
279 280 2.045926 GAGCATGTGAAGGGCGGT 60.046 61.111 0.00 0.00 0.00 5.68
280 281 1.817099 GAGAGCATGTGAAGGGCGG 60.817 63.158 0.00 0.00 0.00 6.13
281 282 0.463295 ATGAGAGCATGTGAAGGGCG 60.463 55.000 0.00 0.00 32.31 6.13
282 283 1.022735 CATGAGAGCATGTGAAGGGC 58.977 55.000 0.00 0.00 45.41 5.19
291 292 7.400599 TTCAAATTTTAGAGCATGAGAGCAT 57.599 32.000 0.00 0.00 36.85 3.79
292 293 6.822667 TTCAAATTTTAGAGCATGAGAGCA 57.177 33.333 0.00 0.00 36.85 4.26
293 294 8.699283 ATTTTCAAATTTTAGAGCATGAGAGC 57.301 30.769 0.00 0.00 0.00 4.09
294 295 9.850628 TGATTTTCAAATTTTAGAGCATGAGAG 57.149 29.630 0.00 0.00 0.00 3.20
295 296 9.630098 GTGATTTTCAAATTTTAGAGCATGAGA 57.370 29.630 0.00 0.00 0.00 3.27
296 297 9.414295 TGTGATTTTCAAATTTTAGAGCATGAG 57.586 29.630 0.00 0.00 0.00 2.90
297 298 9.932207 ATGTGATTTTCAAATTTTAGAGCATGA 57.068 25.926 0.00 0.00 0.00 3.07
333 334 9.176460 TGCACACATATTCTCAGAATTATTTGA 57.824 29.630 4.90 0.00 0.00 2.69
334 335 9.961265 ATGCACACATATTCTCAGAATTATTTG 57.039 29.630 4.90 3.90 33.67 2.32
335 336 9.961265 CATGCACACATATTCTCAGAATTATTT 57.039 29.630 4.90 0.00 33.67 1.40
336 337 9.128404 ACATGCACACATATTCTCAGAATTATT 57.872 29.630 4.90 0.00 33.67 1.40
337 338 8.687292 ACATGCACACATATTCTCAGAATTAT 57.313 30.769 4.90 0.00 33.67 1.28
338 339 8.510243 AACATGCACACATATTCTCAGAATTA 57.490 30.769 4.90 0.00 33.67 1.40
339 340 7.121611 TGAACATGCACACATATTCTCAGAATT 59.878 33.333 4.90 0.00 39.87 2.17
340 341 6.600427 TGAACATGCACACATATTCTCAGAAT 59.400 34.615 4.98 4.98 39.87 2.40
341 342 5.939296 TGAACATGCACACATATTCTCAGAA 59.061 36.000 0.00 0.00 39.87 3.02
342 343 5.352293 GTGAACATGCACACATATTCTCAGA 59.648 40.000 15.02 0.00 39.87 3.27
343 344 5.122711 TGTGAACATGCACACATATTCTCAG 59.877 40.000 17.59 0.00 43.35 3.35
344 345 5.002516 TGTGAACATGCACACATATTCTCA 58.997 37.500 17.59 5.58 43.35 3.27
345 346 5.550232 TGTGAACATGCACACATATTCTC 57.450 39.130 17.59 3.43 43.35 2.87
440 441 9.475620 TCTCCTTTTGACACTATTCACTATAGA 57.524 33.333 6.78 0.00 38.86 1.98
441 442 9.522804 GTCTCCTTTTGACACTATTCACTATAG 57.477 37.037 0.00 0.00 41.74 1.31
442 443 9.031537 TGTCTCCTTTTGACACTATTCACTATA 57.968 33.333 0.00 0.00 39.23 1.31
443 444 7.907389 TGTCTCCTTTTGACACTATTCACTAT 58.093 34.615 0.00 0.00 39.23 2.12
444 445 7.297936 TGTCTCCTTTTGACACTATTCACTA 57.702 36.000 0.00 0.00 39.23 2.74
445 446 6.174720 TGTCTCCTTTTGACACTATTCACT 57.825 37.500 0.00 0.00 39.23 3.41
446 447 6.861065 TTGTCTCCTTTTGACACTATTCAC 57.139 37.500 0.00 0.00 43.13 3.18
447 448 7.338196 TGTTTTGTCTCCTTTTGACACTATTCA 59.662 33.333 0.00 0.00 43.13 2.57
448 449 7.703328 TGTTTTGTCTCCTTTTGACACTATTC 58.297 34.615 0.00 0.00 43.13 1.75
449 450 7.639113 TGTTTTGTCTCCTTTTGACACTATT 57.361 32.000 0.00 0.00 43.13 1.73
450 451 7.502226 TCATGTTTTGTCTCCTTTTGACACTAT 59.498 33.333 0.00 0.00 43.13 2.12
451 452 6.826231 TCATGTTTTGTCTCCTTTTGACACTA 59.174 34.615 0.00 0.00 43.13 2.74
452 453 5.652014 TCATGTTTTGTCTCCTTTTGACACT 59.348 36.000 0.00 0.00 43.13 3.55
453 454 5.890334 TCATGTTTTGTCTCCTTTTGACAC 58.110 37.500 0.00 0.00 43.13 3.67
454 455 6.522625 TTCATGTTTTGTCTCCTTTTGACA 57.477 33.333 0.00 0.00 41.94 3.58
455 456 9.696917 AATATTCATGTTTTGTCTCCTTTTGAC 57.303 29.630 0.00 0.00 35.21 3.18
456 457 9.912634 GAATATTCATGTTTTGTCTCCTTTTGA 57.087 29.630 10.68 0.00 0.00 2.69
457 458 9.918630 AGAATATTCATGTTTTGTCTCCTTTTG 57.081 29.630 17.56 0.00 0.00 2.44
459 460 9.300681 TGAGAATATTCATGTTTTGTCTCCTTT 57.699 29.630 17.56 0.00 31.31 3.11
460 461 8.868522 TGAGAATATTCATGTTTTGTCTCCTT 57.131 30.769 17.56 0.00 31.31 3.36
461 462 9.471702 AATGAGAATATTCATGTTTTGTCTCCT 57.528 29.630 17.56 0.00 37.83 3.69
470 471 9.479549 ACCCTAACAAATGAGAATATTCATGTT 57.520 29.630 17.56 18.23 37.83 2.71
471 472 9.479549 AACCCTAACAAATGAGAATATTCATGT 57.520 29.630 17.56 10.55 37.83 3.21
474 475 9.308000 ACAAACCCTAACAAATGAGAATATTCA 57.692 29.630 17.56 0.00 0.00 2.57
477 478 9.975218 ACTACAAACCCTAACAAATGAGAATAT 57.025 29.630 0.00 0.00 0.00 1.28
478 479 9.444600 GACTACAAACCCTAACAAATGAGAATA 57.555 33.333 0.00 0.00 0.00 1.75
479 480 7.942341 TGACTACAAACCCTAACAAATGAGAAT 59.058 33.333 0.00 0.00 0.00 2.40
480 481 7.227910 GTGACTACAAACCCTAACAAATGAGAA 59.772 37.037 0.00 0.00 0.00 2.87
481 482 6.708949 GTGACTACAAACCCTAACAAATGAGA 59.291 38.462 0.00 0.00 0.00 3.27
482 483 6.347402 CGTGACTACAAACCCTAACAAATGAG 60.347 42.308 0.00 0.00 0.00 2.90
483 484 5.467399 CGTGACTACAAACCCTAACAAATGA 59.533 40.000 0.00 0.00 0.00 2.57
484 485 5.237779 ACGTGACTACAAACCCTAACAAATG 59.762 40.000 0.00 0.00 0.00 2.32
485 486 5.237779 CACGTGACTACAAACCCTAACAAAT 59.762 40.000 10.90 0.00 0.00 2.32
486 487 4.571580 CACGTGACTACAAACCCTAACAAA 59.428 41.667 10.90 0.00 0.00 2.83
487 488 4.121317 CACGTGACTACAAACCCTAACAA 58.879 43.478 10.90 0.00 0.00 2.83
488 489 3.132646 ACACGTGACTACAAACCCTAACA 59.867 43.478 25.01 0.00 0.00 2.41
489 490 3.721035 ACACGTGACTACAAACCCTAAC 58.279 45.455 25.01 0.00 0.00 2.34
490 491 3.638160 AGACACGTGACTACAAACCCTAA 59.362 43.478 25.01 0.00 0.00 2.69
491 492 3.225104 AGACACGTGACTACAAACCCTA 58.775 45.455 25.01 0.00 0.00 3.53
492 493 2.037144 AGACACGTGACTACAAACCCT 58.963 47.619 25.01 0.00 0.00 4.34
493 494 2.521105 AGACACGTGACTACAAACCC 57.479 50.000 25.01 0.00 0.00 4.11
494 495 3.000925 CACAAGACACGTGACTACAAACC 59.999 47.826 25.01 0.00 36.43 3.27
495 496 3.861113 TCACAAGACACGTGACTACAAAC 59.139 43.478 25.01 3.00 38.45 2.93
496 497 4.112716 TCACAAGACACGTGACTACAAA 57.887 40.909 25.01 5.82 38.45 2.83
497 498 3.786516 TCACAAGACACGTGACTACAA 57.213 42.857 25.01 5.45 38.45 2.41
498 499 3.786516 TTCACAAGACACGTGACTACA 57.213 42.857 25.01 3.39 42.88 2.74
499 500 5.652744 ATTTTCACAAGACACGTGACTAC 57.347 39.130 25.01 10.33 42.88 2.73
500 501 5.813157 TGAATTTTCACAAGACACGTGACTA 59.187 36.000 25.01 4.62 42.88 2.59
501 502 4.634004 TGAATTTTCACAAGACACGTGACT 59.366 37.500 25.01 19.59 42.88 3.41
502 503 4.904116 TGAATTTTCACAAGACACGTGAC 58.096 39.130 25.01 17.23 42.88 3.67
503 504 5.553290 TTGAATTTTCACAAGACACGTGA 57.447 34.783 25.01 0.00 41.53 4.35
504 505 6.624710 TTTTGAATTTTCACAAGACACGTG 57.375 33.333 15.48 15.48 36.83 4.49
505 506 7.826260 ATTTTTGAATTTTCACAAGACACGT 57.174 28.000 0.00 0.00 36.83 4.49
566 567 7.090173 GCTAGTACCATGCTTCAATTTTTGAA 58.910 34.615 2.96 2.96 46.68 2.69
567 568 6.208402 TGCTAGTACCATGCTTCAATTTTTGA 59.792 34.615 0.00 0.00 38.04 2.69
568 569 6.389091 TGCTAGTACCATGCTTCAATTTTTG 58.611 36.000 0.00 0.00 0.00 2.44
569 570 6.588719 TGCTAGTACCATGCTTCAATTTTT 57.411 33.333 0.00 0.00 0.00 1.94
570 571 6.153340 ACATGCTAGTACCATGCTTCAATTTT 59.847 34.615 9.66 0.00 42.89 1.82
571 572 5.653769 ACATGCTAGTACCATGCTTCAATTT 59.346 36.000 9.66 0.00 42.89 1.82
572 573 5.195940 ACATGCTAGTACCATGCTTCAATT 58.804 37.500 9.66 0.00 42.89 2.32
573 574 4.785301 ACATGCTAGTACCATGCTTCAAT 58.215 39.130 9.66 0.00 42.89 2.57
574 575 4.220693 ACATGCTAGTACCATGCTTCAA 57.779 40.909 9.66 0.00 42.89 2.69
575 576 3.912496 ACATGCTAGTACCATGCTTCA 57.088 42.857 9.66 0.00 42.89 3.02
576 577 5.237344 CCTTTACATGCTAGTACCATGCTTC 59.763 44.000 9.66 0.00 42.89 3.86
577 578 5.126067 CCTTTACATGCTAGTACCATGCTT 58.874 41.667 9.66 0.00 42.89 3.91
578 579 4.444876 CCCTTTACATGCTAGTACCATGCT 60.445 45.833 9.66 2.43 42.89 3.79
579 580 3.815401 CCCTTTACATGCTAGTACCATGC 59.185 47.826 9.66 3.54 42.89 4.06
580 581 4.816385 CACCCTTTACATGCTAGTACCATG 59.184 45.833 8.52 8.52 44.28 3.66
581 582 4.141482 CCACCCTTTACATGCTAGTACCAT 60.141 45.833 0.00 0.00 0.00 3.55
582 583 3.199071 CCACCCTTTACATGCTAGTACCA 59.801 47.826 0.00 0.00 0.00 3.25
583 584 3.199289 ACCACCCTTTACATGCTAGTACC 59.801 47.826 0.00 0.00 0.00 3.34
584 585 4.482952 ACCACCCTTTACATGCTAGTAC 57.517 45.455 0.00 0.00 0.00 2.73
585 586 5.900699 TGATACCACCCTTTACATGCTAGTA 59.099 40.000 0.00 0.00 0.00 1.82
586 587 4.719773 TGATACCACCCTTTACATGCTAGT 59.280 41.667 0.00 0.00 0.00 2.57
587 588 5.057149 GTGATACCACCCTTTACATGCTAG 58.943 45.833 0.00 0.00 37.33 3.42
601 602 6.642950 CGAAGAGAAATATCAGGTGATACCAC 59.357 42.308 1.72 0.00 41.95 4.16
621 624 1.005569 TGTAGAGAAGCCCTCCGAAGA 59.994 52.381 0.57 0.00 42.97 2.87
707 714 1.133976 CCAGGCCTTCTGTTAGGGATG 60.134 57.143 0.00 0.00 41.83 3.51
731 750 2.969821 TCTTCCCTGCTTGCCTTTTA 57.030 45.000 0.00 0.00 0.00 1.52
767 786 2.105821 TGCAAGTACTACTTTGGCTGGT 59.894 45.455 0.00 0.00 36.03 4.00
832 861 2.423446 CTGCCCTACCGCATCCTC 59.577 66.667 0.00 0.00 38.30 3.71
833 862 3.866582 GCTGCCCTACCGCATCCT 61.867 66.667 0.00 0.00 38.30 3.24
834 863 3.816367 GAGCTGCCCTACCGCATCC 62.816 68.421 0.00 0.00 38.30 3.51
836 865 3.866582 GGAGCTGCCCTACCGCAT 61.867 66.667 0.00 0.00 38.30 4.73
881 911 2.091885 TGCTTCCTTTTTCTCTGTGGGT 60.092 45.455 0.00 0.00 0.00 4.51
899 929 3.368571 GCGGCTGCTTTTCCTGCT 61.369 61.111 11.21 0.00 38.39 4.24
989 1026 0.754957 CCACGCCATCTCTCCTCTCT 60.755 60.000 0.00 0.00 0.00 3.10
990 1027 1.040339 ACCACGCCATCTCTCCTCTC 61.040 60.000 0.00 0.00 0.00 3.20
991 1028 1.000993 ACCACGCCATCTCTCCTCT 59.999 57.895 0.00 0.00 0.00 3.69
992 1029 1.142748 CACCACGCCATCTCTCCTC 59.857 63.158 0.00 0.00 0.00 3.71
993 1030 2.362369 CCACCACGCCATCTCTCCT 61.362 63.158 0.00 0.00 0.00 3.69
1113 1153 3.365265 CCGCTGCTGTTTGGGGTC 61.365 66.667 0.00 0.00 0.00 4.46
1116 1156 3.058160 CTCCCGCTGCTGTTTGGG 61.058 66.667 10.18 10.18 43.36 4.12
1695 1735 1.810030 GGCGTTGGAGAAGGTAGCG 60.810 63.158 0.00 0.00 0.00 4.26
1888 1931 3.604667 CTGCAGGTTTGGCGGCAA 61.605 61.111 21.79 21.79 35.59 4.52
1896 1939 2.381911 CCATTAGGCATCTGCAGGTTT 58.618 47.619 15.13 0.00 44.36 3.27
1986 2029 3.522731 ACCTCGCTCGCTGGCTAG 61.523 66.667 0.00 0.00 0.00 3.42
1987 2030 3.826754 CACCTCGCTCGCTGGCTA 61.827 66.667 0.00 0.00 0.00 3.93
1990 2033 3.691744 GAGACACCTCGCTCGCTGG 62.692 68.421 0.00 0.00 0.00 4.85
1991 2034 2.202544 GAGACACCTCGCTCGCTG 60.203 66.667 0.00 0.00 0.00 5.18
2009 2059 1.490574 AAAGAGGGGGATCGAGAGTG 58.509 55.000 0.00 0.00 0.00 3.51
2030 2080 8.988064 AAGAAAGAAAGAAAGGAACAAGAAAC 57.012 30.769 0.00 0.00 0.00 2.78
2031 2081 9.639601 GAAAGAAAGAAAGAAAGGAACAAGAAA 57.360 29.630 0.00 0.00 0.00 2.52
2046 2096 5.913137 TTGTGAAGCTGGAAAGAAAGAAA 57.087 34.783 0.00 0.00 0.00 2.52
2080 2142 7.559897 ACCTAAAACAAAACAAGGAGATCAGAA 59.440 33.333 0.00 0.00 0.00 3.02
2081 2143 7.013274 CACCTAAAACAAAACAAGGAGATCAGA 59.987 37.037 0.00 0.00 0.00 3.27
2082 2144 7.141363 CACCTAAAACAAAACAAGGAGATCAG 58.859 38.462 0.00 0.00 0.00 2.90
2083 2145 6.460953 GCACCTAAAACAAAACAAGGAGATCA 60.461 38.462 0.00 0.00 0.00 2.92
2084 2146 5.920840 GCACCTAAAACAAAACAAGGAGATC 59.079 40.000 0.00 0.00 0.00 2.75
2165 2235 5.434408 CAGTTTCTCCTTGATCCATGATGA 58.566 41.667 0.00 0.00 0.00 2.92
2166 2236 4.036498 GCAGTTTCTCCTTGATCCATGATG 59.964 45.833 0.00 0.00 0.00 3.07
2167 2237 4.205587 GCAGTTTCTCCTTGATCCATGAT 58.794 43.478 0.00 0.00 0.00 2.45
2301 2395 6.314152 TCTCCGCGTAAAATCAAATCAATGTA 59.686 34.615 4.92 0.00 0.00 2.29
2302 2396 5.123186 TCTCCGCGTAAAATCAAATCAATGT 59.877 36.000 4.92 0.00 0.00 2.71
2304 2398 5.811399 TCTCCGCGTAAAATCAAATCAAT 57.189 34.783 4.92 0.00 0.00 2.57
2306 2400 5.501736 CGAATCTCCGCGTAAAATCAAATCA 60.502 40.000 4.92 0.00 0.00 2.57
2307 2401 4.898488 CGAATCTCCGCGTAAAATCAAATC 59.102 41.667 4.92 0.00 0.00 2.17
2401 2562 8.519799 TGCTATAGCCAGCTATTTAAAACTTT 57.480 30.769 21.84 0.00 42.30 2.66
2446 2655 6.760770 GCTGTGCCAAATGCCTTAAATTATAA 59.239 34.615 0.00 0.00 40.16 0.98
2468 2691 1.726791 AGACACGCTAAATTGACGCTG 59.273 47.619 0.00 0.00 0.00 5.18
2475 2698 2.744202 CAGCCTCAAGACACGCTAAATT 59.256 45.455 0.00 0.00 0.00 1.82
2507 2730 6.586082 CCAAAGTTTTAAATAGCGAGCAATGT 59.414 34.615 0.00 0.00 0.00 2.71
2535 2758 8.428063 GCCTACCATATGATAGATTAGCATTCT 58.572 37.037 5.60 0.00 36.10 2.40
2601 2825 2.392662 TCCATTCAACAGGTTTTGGCA 58.607 42.857 0.00 0.00 0.00 4.92
2602 2826 3.130633 GTTCCATTCAACAGGTTTTGGC 58.869 45.455 0.00 0.00 0.00 4.52
2604 2828 3.494223 GGGGTTCCATTCAACAGGTTTTG 60.494 47.826 0.00 0.00 0.00 2.44
2608 2832 0.251165 CGGGGTTCCATTCAACAGGT 60.251 55.000 0.00 0.00 0.00 4.00
2610 2834 1.616159 AACGGGGTTCCATTCAACAG 58.384 50.000 0.00 0.00 0.00 3.16
2611 2835 1.957877 GAAACGGGGTTCCATTCAACA 59.042 47.619 0.00 0.00 32.11 3.33
2651 2875 0.532573 GACGAGAGATGAACAGGCCA 59.467 55.000 5.01 0.00 0.00 5.36
2654 2878 2.917971 GTTTCGACGAGAGATGAACAGG 59.082 50.000 0.00 0.00 0.00 4.00
2681 2907 6.383147 GGGATATACAAATGGGTAGCTAGCTA 59.617 42.308 20.67 20.67 0.00 3.32
2683 2909 5.429130 GGGATATACAAATGGGTAGCTAGC 58.571 45.833 14.67 14.67 0.00 3.42
2685 2911 4.468510 CCGGGATATACAAATGGGTAGCTA 59.531 45.833 0.00 0.00 0.00 3.32
2687 2913 3.606687 CCGGGATATACAAATGGGTAGC 58.393 50.000 0.00 0.00 0.00 3.58
2688 2914 3.841845 TCCCGGGATATACAAATGGGTAG 59.158 47.826 22.63 0.00 36.53 3.18
2689 2915 3.583966 GTCCCGGGATATACAAATGGGTA 59.416 47.826 29.73 0.00 36.53 3.69
2690 2916 2.374170 GTCCCGGGATATACAAATGGGT 59.626 50.000 29.73 0.00 36.53 4.51
2691 2917 2.614481 CGTCCCGGGATATACAAATGGG 60.614 54.545 29.73 0.00 36.48 4.00
2692 2918 2.300723 TCGTCCCGGGATATACAAATGG 59.699 50.000 29.73 6.13 0.00 3.16
2694 2920 2.029649 CGTCGTCCCGGGATATACAAAT 60.030 50.000 29.73 0.00 0.00 2.32
2697 2923 1.518056 GCGTCGTCCCGGGATATACA 61.518 60.000 29.73 6.05 0.00 2.29
2698 2924 1.211190 GCGTCGTCCCGGGATATAC 59.789 63.158 29.73 22.62 0.00 1.47
2699 2925 1.228215 TGCGTCGTCCCGGGATATA 60.228 57.895 29.73 12.70 0.00 0.86
2747 2973 1.977854 TGTGTACCAACTGCATCTCCT 59.022 47.619 0.00 0.00 0.00 3.69
2782 3008 8.517062 AAGCTGAGCTACAAGATCAAATATTT 57.483 30.769 7.68 0.00 40.45 1.40
2786 3012 6.127786 GGAAAAGCTGAGCTACAAGATCAAAT 60.128 38.462 7.68 0.00 40.45 2.32
2812 3038 7.275920 AGCCAAACAAATAAACATAACCAACA 58.724 30.769 0.00 0.00 0.00 3.33
2850 3076 0.312416 CAATCCGCCGAACACCAAAA 59.688 50.000 0.00 0.00 0.00 2.44
2860 3087 0.953471 TTGACCAAGACAATCCGCCG 60.953 55.000 0.00 0.00 0.00 6.46
2874 3101 3.197766 TGTCTCACCCTGATACATTGACC 59.802 47.826 0.00 0.00 30.04 4.02
2937 3164 7.444487 AGGTACTAAACAAGGAAGCTAACAAAG 59.556 37.037 0.00 0.00 36.02 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.