Multiple sequence alignment - TraesCS1B01G055300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G055300 chr1B 100.000 5683 0 0 1 5683 38071458 38065776 0.000000e+00 10495.0
1 TraesCS1B01G055300 chr1B 91.704 446 19 5 3947 4381 17893822 17893384 2.270000e-168 603.0
2 TraesCS1B01G055300 chr1B 85.455 220 9 5 4430 4648 17893374 17893177 2.080000e-49 207.0
3 TraesCS1B01G055300 chr1B 100.000 54 0 0 52 105 490456593 490456646 3.620000e-17 100.0
4 TraesCS1B01G055300 chr1B 98.182 55 1 0 51 105 634420820 634420874 4.690000e-16 97.1
5 TraesCS1B01G055300 chr1B 98.113 53 1 0 51 103 581162779 581162831 6.060000e-15 93.5
6 TraesCS1B01G055300 chr1B 98.039 51 1 0 51 101 141757005 141757055 7.840000e-14 89.8
7 TraesCS1B01G055300 chr1D 97.237 1846 17 14 3719 5556 21864313 21862494 0.000000e+00 3096.0
8 TraesCS1B01G055300 chr1D 92.644 1441 25 15 1850 3238 21867860 21866449 0.000000e+00 1999.0
9 TraesCS1B01G055300 chr1D 93.772 1140 53 12 3252 4378 12529815 12530949 0.000000e+00 1696.0
10 TraesCS1B01G055300 chr1D 87.659 1256 90 26 4430 5660 12530962 12532177 0.000000e+00 1400.0
11 TraesCS1B01G055300 chr1D 98.387 496 7 1 3236 3730 21865529 21865034 0.000000e+00 870.0
12 TraesCS1B01G055300 chr1D 93.878 245 12 1 130 371 21868339 21868095 3.240000e-97 366.0
13 TraesCS1B01G055300 chr1D 98.077 208 3 1 484 691 21868106 21867900 1.510000e-95 361.0
14 TraesCS1B01G055300 chr1D 90.612 245 17 6 2998 3238 12528254 12528496 2.550000e-83 320.0
15 TraesCS1B01G055300 chr1D 99.291 141 0 1 5543 5683 21857090 21856951 2.630000e-63 254.0
16 TraesCS1B01G055300 chr1D 100.000 50 0 0 739 788 21867907 21867858 6.060000e-15 93.5
17 TraesCS1B01G055300 chr1A 97.653 1406 22 5 3251 4645 23181205 23179800 0.000000e+00 2403.0
18 TraesCS1B01G055300 chr1A 97.527 1011 12 4 4673 5682 23179805 23178807 0.000000e+00 1716.0
19 TraesCS1B01G055300 chr1A 92.206 834 13 4 484 1314 23188138 23187354 0.000000e+00 1133.0
20 TraesCS1B01G055300 chr1A 94.345 725 18 6 1371 2087 23185590 23184881 0.000000e+00 1090.0
21 TraesCS1B01G055300 chr1A 94.853 544 8 3 2260 2784 23184881 23184339 0.000000e+00 832.0
22 TraesCS1B01G055300 chr1A 80.233 1032 134 34 2003 3001 23302382 23303376 0.000000e+00 712.0
23 TraesCS1B01G055300 chr1A 98.276 290 5 0 2770 3059 23183138 23182849 5.080000e-140 508.0
24 TraesCS1B01G055300 chr1A 95.122 246 11 1 127 371 23188372 23188127 2.480000e-103 387.0
25 TraesCS1B01G055300 chr1A 98.065 155 3 0 3084 3238 23182852 23182698 2.610000e-68 270.0
26 TraesCS1B01G055300 chr1A 91.964 112 7 2 127 237 448838134 448838024 7.620000e-34 156.0
27 TraesCS1B01G055300 chr6D 94.750 1543 61 10 1035 2574 81384660 81383135 0.000000e+00 2383.0
28 TraesCS1B01G055300 chr6D 93.673 1138 54 9 3252 4384 81381596 81380472 0.000000e+00 1687.0
29 TraesCS1B01G055300 chr6D 92.009 926 48 12 4430 5355 81380465 81379566 0.000000e+00 1277.0
30 TraesCS1B01G055300 chr6D 93.708 445 23 2 484 928 81385096 81384657 0.000000e+00 662.0
31 TraesCS1B01G055300 chr6D 93.532 201 8 1 3043 3238 81383133 81382933 1.550000e-75 294.0
32 TraesCS1B01G055300 chr6D 100.000 38 0 0 1 38 56394065 56394102 2.840000e-08 71.3
33 TraesCS1B01G055300 chr3B 97.500 120 2 1 373 492 18662033 18662151 2.680000e-48 204.0
34 TraesCS1B01G055300 chr3B 98.305 59 1 0 51 109 493281014 493280956 2.800000e-18 104.0
35 TraesCS1B01G055300 chr3B 98.305 59 1 0 51 109 493862137 493862195 2.800000e-18 104.0
36 TraesCS1B01G055300 chr3B 100.000 53 0 0 51 103 725119911 725119963 1.300000e-16 99.0
37 TraesCS1B01G055300 chr6B 97.479 119 2 1 373 491 389241181 389241298 9.650000e-48 202.0
38 TraesCS1B01G055300 chr6B 98.261 115 2 0 373 487 445031070 445031184 9.650000e-48 202.0
39 TraesCS1B01G055300 chr6B 98.182 55 1 0 51 105 641025435 641025381 4.690000e-16 97.1
40 TraesCS1B01G055300 chr5B 98.261 115 2 0 373 487 693111729 693111615 9.650000e-48 202.0
41 TraesCS1B01G055300 chr5B 97.391 115 3 0 373 487 677382940 677382826 4.490000e-46 196.0
42 TraesCS1B01G055300 chr5B 91.339 127 9 2 127 253 209210598 209210474 7.570000e-39 172.0
43 TraesCS1B01G055300 chr5B 96.296 54 2 0 51 104 653302998 653302945 7.840000e-14 89.8
44 TraesCS1B01G055300 chr7B 97.414 116 3 0 373 488 577803961 577804076 1.250000e-46 198.0
45 TraesCS1B01G055300 chr7B 92.793 111 7 1 127 237 537786340 537786231 5.890000e-35 159.0
46 TraesCS1B01G055300 chrUn 97.391 115 3 0 373 487 1597348 1597234 4.490000e-46 196.0
47 TraesCS1B01G055300 chrUn 100.000 38 0 0 1 38 221366331 221366368 2.840000e-08 71.3
48 TraesCS1B01G055300 chrUn 100.000 38 0 0 1 38 225540143 225540180 2.840000e-08 71.3
49 TraesCS1B01G055300 chrUn 100.000 38 0 0 1 38 271361376 271361339 2.840000e-08 71.3
50 TraesCS1B01G055300 chrUn 100.000 38 0 0 1 38 396543776 396543813 2.840000e-08 71.3
51 TraesCS1B01G055300 chrUn 100.000 38 0 0 1 38 415803093 415803056 2.840000e-08 71.3
52 TraesCS1B01G055300 chr4A 97.391 115 3 0 373 487 74933800 74933914 4.490000e-46 196.0
53 TraesCS1B01G055300 chr4A 89.231 65 7 0 3114 3178 643689055 643689119 1.310000e-11 82.4
54 TraesCS1B01G055300 chr4A 89.231 65 7 0 3114 3178 643784956 643785020 1.310000e-11 82.4
55 TraesCS1B01G055300 chr7A 96.581 117 4 0 371 487 152084085 152084201 1.620000e-45 195.0
56 TraesCS1B01G055300 chr7A 89.231 65 7 0 3114 3178 39002543 39002607 1.310000e-11 82.4
57 TraesCS1B01G055300 chr3D 91.803 122 8 2 127 248 443366849 443366730 9.790000e-38 169.0
58 TraesCS1B01G055300 chr4D 100.000 38 0 0 1 38 84282138 84282175 2.840000e-08 71.3
59 TraesCS1B01G055300 chr4D 100.000 38 0 0 1 38 474715557 474715594 2.840000e-08 71.3
60 TraesCS1B01G055300 chr4D 100.000 38 0 0 1 38 498606850 498606813 2.840000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G055300 chr1B 38065776 38071458 5682 True 10495.000000 10495 100.000000 1 5683 1 chr1B.!!$R1 5682
1 TraesCS1B01G055300 chr1B 17893177 17893822 645 True 405.000000 603 88.579500 3947 4648 2 chr1B.!!$R2 701
2 TraesCS1B01G055300 chr1D 12528254 12532177 3923 False 1138.666667 1696 90.681000 2998 5660 3 chr1D.!!$F1 2662
3 TraesCS1B01G055300 chr1D 21862494 21868339 5845 True 1130.916667 3096 96.703833 130 5556 6 chr1D.!!$R2 5426
4 TraesCS1B01G055300 chr1A 23178807 23188372 9565 True 1042.375000 2403 96.005875 127 5682 8 chr1A.!!$R2 5555
5 TraesCS1B01G055300 chr1A 23302382 23303376 994 False 712.000000 712 80.233000 2003 3001 1 chr1A.!!$F1 998
6 TraesCS1B01G055300 chr6D 81379566 81385096 5530 True 1260.600000 2383 93.534400 484 5355 5 chr6D.!!$R1 4871

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.108281 GCGTCTCCCTCAACCCTAAC 60.108 60.000 0.00 0.00 0.00 2.34 F
388 393 0.179936 CCTGGGTTGAGATCCTCTGC 59.820 60.000 0.00 0.00 0.00 4.26 F
2095 3861 0.172803 GGTCATCAACGGACTAGCGT 59.827 55.000 0.00 0.00 35.61 5.07 F
2152 3918 1.417517 TGCAGACCATGACTCTGTTGT 59.582 47.619 17.08 0.00 37.96 3.32 F
2756 4574 2.016318 TGCCGTAAATTCTCATGCCAG 58.984 47.619 0.00 0.00 0.00 4.85 F
3878 9736 0.536006 GCCACTTCAAGGACTGCAGT 60.536 55.000 21.88 21.88 30.90 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 3542 1.552337 GTGCTCTGAGAACTCCATGGA 59.448 52.381 15.27 15.27 0.00 3.41 R
2152 3918 3.454447 TCTCCACCAGACTCAAACTTTGA 59.546 43.478 4.16 4.16 38.17 2.69 R
3248 6306 1.072266 TCCCTAAAAGGCTTGGCTGA 58.928 50.000 0.00 0.00 32.73 4.26 R
3249 6307 1.821136 CTTCCCTAAAAGGCTTGGCTG 59.179 52.381 0.00 0.00 32.73 4.85 R
4647 10547 1.069636 CGGCAGTGAAAAAGTGAGAGC 60.070 52.381 0.00 0.00 0.00 4.09 R
5069 11007 0.108615 GAGGCTAGAAGCTGCGAACA 60.109 55.000 0.00 0.00 41.99 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.200283 CTCGGCAGCGTCTCCCTC 62.200 72.222 0.00 0.00 0.00 4.30
19 20 4.069232 CGGCAGCGTCTCCCTCAA 62.069 66.667 0.00 0.00 0.00 3.02
20 21 2.435059 GGCAGCGTCTCCCTCAAC 60.435 66.667 0.00 0.00 0.00 3.18
21 22 2.435059 GCAGCGTCTCCCTCAACC 60.435 66.667 0.00 0.00 0.00 3.77
22 23 2.266055 CAGCGTCTCCCTCAACCC 59.734 66.667 0.00 0.00 0.00 4.11
23 24 2.120718 AGCGTCTCCCTCAACCCT 59.879 61.111 0.00 0.00 0.00 4.34
24 25 0.970937 CAGCGTCTCCCTCAACCCTA 60.971 60.000 0.00 0.00 0.00 3.53
25 26 0.252103 AGCGTCTCCCTCAACCCTAA 60.252 55.000 0.00 0.00 0.00 2.69
26 27 0.108281 GCGTCTCCCTCAACCCTAAC 60.108 60.000 0.00 0.00 0.00 2.34
27 28 0.535797 CGTCTCCCTCAACCCTAACC 59.464 60.000 0.00 0.00 0.00 2.85
28 29 0.910338 GTCTCCCTCAACCCTAACCC 59.090 60.000 0.00 0.00 0.00 4.11
29 30 0.797579 TCTCCCTCAACCCTAACCCT 59.202 55.000 0.00 0.00 0.00 4.34
30 31 2.013006 TCTCCCTCAACCCTAACCCTA 58.987 52.381 0.00 0.00 0.00 3.53
31 32 2.117051 CTCCCTCAACCCTAACCCTAC 58.883 57.143 0.00 0.00 0.00 3.18
32 33 1.210538 CCCTCAACCCTAACCCTACC 58.789 60.000 0.00 0.00 0.00 3.18
33 34 1.556238 CCCTCAACCCTAACCCTACCA 60.556 57.143 0.00 0.00 0.00 3.25
34 35 1.558294 CCTCAACCCTAACCCTACCAC 59.442 57.143 0.00 0.00 0.00 4.16
35 36 2.262637 CTCAACCCTAACCCTACCACA 58.737 52.381 0.00 0.00 0.00 4.17
36 37 1.980036 TCAACCCTAACCCTACCACAC 59.020 52.381 0.00 0.00 0.00 3.82
37 38 1.700739 CAACCCTAACCCTACCACACA 59.299 52.381 0.00 0.00 0.00 3.72
38 39 2.106857 CAACCCTAACCCTACCACACAA 59.893 50.000 0.00 0.00 0.00 3.33
39 40 1.982958 ACCCTAACCCTACCACACAAG 59.017 52.381 0.00 0.00 0.00 3.16
40 41 1.280998 CCCTAACCCTACCACACAAGG 59.719 57.143 0.00 0.00 0.00 3.61
47 48 3.897419 TACCACACAAGGGTAGGGT 57.103 52.632 0.00 0.00 39.85 4.34
48 49 3.897419 ACCACACAAGGGTAGGGTA 57.103 52.632 0.00 0.00 36.72 3.69
49 50 1.652947 ACCACACAAGGGTAGGGTAG 58.347 55.000 0.00 0.00 36.72 3.18
50 51 0.909623 CCACACAAGGGTAGGGTAGG 59.090 60.000 0.00 0.00 0.00 3.18
51 52 0.252197 CACACAAGGGTAGGGTAGGC 59.748 60.000 0.00 0.00 0.00 3.93
52 53 1.262640 ACACAAGGGTAGGGTAGGCG 61.263 60.000 0.00 0.00 0.00 5.52
53 54 2.364780 ACAAGGGTAGGGTAGGCGC 61.365 63.158 0.00 0.00 0.00 6.53
54 55 2.039951 AAGGGTAGGGTAGGCGCA 59.960 61.111 10.83 0.00 0.00 6.09
55 56 1.614226 AAGGGTAGGGTAGGCGCAA 60.614 57.895 10.83 0.00 0.00 4.85
56 57 1.623542 AAGGGTAGGGTAGGCGCAAG 61.624 60.000 10.83 0.00 43.44 4.01
57 58 2.504519 GGTAGGGTAGGCGCAAGG 59.495 66.667 10.83 0.00 38.28 3.61
58 59 2.504519 GTAGGGTAGGCGCAAGGG 59.495 66.667 10.83 0.00 38.28 3.95
59 60 2.062177 GTAGGGTAGGCGCAAGGGA 61.062 63.158 10.83 0.00 38.28 4.20
60 61 1.074775 TAGGGTAGGCGCAAGGGAT 60.075 57.895 10.83 0.00 38.28 3.85
61 62 1.119574 TAGGGTAGGCGCAAGGGATC 61.120 60.000 10.83 0.00 38.28 3.36
62 63 2.111251 GGTAGGCGCAAGGGATCC 59.889 66.667 10.83 1.92 38.28 3.36
63 64 2.111251 GTAGGCGCAAGGGATCCC 59.889 66.667 24.59 24.59 38.28 3.85
64 65 3.546543 TAGGCGCAAGGGATCCCG 61.547 66.667 25.48 14.21 41.95 5.14
68 69 4.891727 CGCAAGGGATCCCGGTCG 62.892 72.222 25.48 22.93 41.95 4.79
70 71 4.547367 CAAGGGATCCCGGTCGCC 62.547 72.222 25.48 0.00 41.95 5.54
71 72 4.798682 AAGGGATCCCGGTCGCCT 62.799 66.667 25.48 2.42 41.95 5.52
75 76 3.155167 GATCCCGGTCGCCTCCTT 61.155 66.667 0.00 0.00 0.00 3.36
76 77 3.447025 GATCCCGGTCGCCTCCTTG 62.447 68.421 0.00 0.00 0.00 3.61
77 78 3.976490 ATCCCGGTCGCCTCCTTGA 62.976 63.158 0.00 0.00 0.00 3.02
78 79 3.470888 CCCGGTCGCCTCCTTGAT 61.471 66.667 0.00 0.00 0.00 2.57
79 80 2.107141 CCGGTCGCCTCCTTGATC 59.893 66.667 0.00 0.00 0.00 2.92
80 81 2.278857 CGGTCGCCTCCTTGATCG 60.279 66.667 0.00 0.00 31.78 3.69
81 82 2.586357 GGTCGCCTCCTTGATCGC 60.586 66.667 0.00 0.00 0.00 4.58
82 83 2.586357 GTCGCCTCCTTGATCGCC 60.586 66.667 0.00 0.00 0.00 5.54
83 84 2.759973 TCGCCTCCTTGATCGCCT 60.760 61.111 0.00 0.00 0.00 5.52
84 85 2.587194 CGCCTCCTTGATCGCCTG 60.587 66.667 0.00 0.00 0.00 4.85
85 86 2.903357 GCCTCCTTGATCGCCTGA 59.097 61.111 0.00 0.00 0.00 3.86
86 87 1.449353 GCCTCCTTGATCGCCTGAT 59.551 57.895 0.00 0.00 37.60 2.90
87 88 0.883814 GCCTCCTTGATCGCCTGATG 60.884 60.000 0.00 0.00 34.09 3.07
88 89 0.883814 CCTCCTTGATCGCCTGATGC 60.884 60.000 0.00 0.00 34.09 3.91
98 99 3.997672 GCCTGATGCGATCCTACTT 57.002 52.632 0.00 0.00 0.00 2.24
99 100 2.246719 GCCTGATGCGATCCTACTTT 57.753 50.000 0.00 0.00 0.00 2.66
100 101 2.565841 GCCTGATGCGATCCTACTTTT 58.434 47.619 0.00 0.00 0.00 2.27
101 102 2.945668 GCCTGATGCGATCCTACTTTTT 59.054 45.455 0.00 0.00 0.00 1.94
102 103 3.002759 GCCTGATGCGATCCTACTTTTTC 59.997 47.826 0.00 0.00 0.00 2.29
103 104 3.246226 CCTGATGCGATCCTACTTTTTCG 59.754 47.826 0.00 0.00 34.83 3.46
108 109 3.658351 CGATCCTACTTTTTCGCAAGG 57.342 47.619 0.00 0.00 38.47 3.61
109 110 2.351726 CGATCCTACTTTTTCGCAAGGG 59.648 50.000 0.00 0.00 38.47 3.95
110 111 1.530323 TCCTACTTTTTCGCAAGGGC 58.470 50.000 0.00 0.00 38.47 5.19
111 112 1.202830 TCCTACTTTTTCGCAAGGGCA 60.203 47.619 0.00 0.00 41.24 5.36
112 113 1.611491 CCTACTTTTTCGCAAGGGCAA 59.389 47.619 0.00 0.00 41.24 4.52
113 114 2.607038 CCTACTTTTTCGCAAGGGCAAC 60.607 50.000 0.00 0.00 41.24 4.17
114 115 0.820871 ACTTTTTCGCAAGGGCAACA 59.179 45.000 0.00 0.00 41.24 3.33
115 116 1.205893 ACTTTTTCGCAAGGGCAACAA 59.794 42.857 0.00 0.00 41.24 2.83
116 117 2.275318 CTTTTTCGCAAGGGCAACAAA 58.725 42.857 0.00 0.00 41.24 2.83
117 118 1.646189 TTTTCGCAAGGGCAACAAAC 58.354 45.000 0.00 0.00 41.24 2.93
118 119 0.820871 TTTCGCAAGGGCAACAAACT 59.179 45.000 0.00 0.00 41.24 2.66
119 120 0.820871 TTCGCAAGGGCAACAAACTT 59.179 45.000 0.00 0.00 41.24 2.66
120 121 1.681538 TCGCAAGGGCAACAAACTTA 58.318 45.000 0.00 0.00 41.24 2.24
121 122 2.235016 TCGCAAGGGCAACAAACTTAT 58.765 42.857 0.00 0.00 41.24 1.73
122 123 2.227865 TCGCAAGGGCAACAAACTTATC 59.772 45.455 0.00 0.00 41.24 1.75
123 124 2.228822 CGCAAGGGCAACAAACTTATCT 59.771 45.455 0.00 0.00 41.24 1.98
124 125 3.305335 CGCAAGGGCAACAAACTTATCTT 60.305 43.478 0.00 0.00 41.24 2.40
125 126 4.237724 GCAAGGGCAACAAACTTATCTTC 58.762 43.478 0.00 0.00 40.72 2.87
156 157 1.044611 TGGTCGTCATGTCTGGTTGA 58.955 50.000 0.00 0.00 0.00 3.18
177 178 1.369625 CATGCCTCACGACCTTAACC 58.630 55.000 0.00 0.00 0.00 2.85
288 293 0.472044 TGTGCCCACAAGTAGCAGAA 59.528 50.000 0.00 0.00 38.56 3.02
378 383 2.531685 CCCACCTCCCTGGGTTGA 60.532 66.667 13.56 0.00 45.58 3.18
379 384 2.606587 CCCACCTCCCTGGGTTGAG 61.607 68.421 13.56 2.48 45.58 3.02
380 385 1.538876 CCACCTCCCTGGGTTGAGA 60.539 63.158 13.56 0.00 41.11 3.27
381 386 0.916358 CCACCTCCCTGGGTTGAGAT 60.916 60.000 13.56 0.00 41.11 2.75
382 387 0.543749 CACCTCCCTGGGTTGAGATC 59.456 60.000 13.56 0.00 41.11 2.75
383 388 0.621862 ACCTCCCTGGGTTGAGATCC 60.622 60.000 13.56 0.00 41.11 3.36
384 389 0.327000 CCTCCCTGGGTTGAGATCCT 60.327 60.000 13.56 0.00 0.00 3.24
385 390 1.127343 CTCCCTGGGTTGAGATCCTC 58.873 60.000 13.56 0.00 0.00 3.71
386 391 0.719015 TCCCTGGGTTGAGATCCTCT 59.281 55.000 13.56 0.00 0.00 3.69
387 392 0.835941 CCCTGGGTTGAGATCCTCTG 59.164 60.000 3.97 0.00 0.00 3.35
388 393 0.179936 CCTGGGTTGAGATCCTCTGC 59.820 60.000 0.00 0.00 0.00 4.26
389 394 0.907486 CTGGGTTGAGATCCTCTGCA 59.093 55.000 0.00 0.00 0.00 4.41
390 395 0.907486 TGGGTTGAGATCCTCTGCAG 59.093 55.000 7.63 7.63 0.00 4.41
391 396 0.908198 GGGTTGAGATCCTCTGCAGT 59.092 55.000 14.67 0.00 0.00 4.40
392 397 2.111384 GGGTTGAGATCCTCTGCAGTA 58.889 52.381 14.67 0.81 0.00 2.74
393 398 2.159028 GGGTTGAGATCCTCTGCAGTAC 60.159 54.545 14.67 2.25 0.00 2.73
394 399 2.159028 GGTTGAGATCCTCTGCAGTACC 60.159 54.545 14.67 5.07 0.00 3.34
395 400 1.393603 TGAGATCCTCTGCAGTACCG 58.606 55.000 14.67 0.99 0.00 4.02
396 401 1.341089 TGAGATCCTCTGCAGTACCGT 60.341 52.381 14.67 0.00 0.00 4.83
397 402 2.092592 TGAGATCCTCTGCAGTACCGTA 60.093 50.000 14.67 0.00 0.00 4.02
398 403 3.150767 GAGATCCTCTGCAGTACCGTAT 58.849 50.000 14.67 0.23 0.00 3.06
399 404 2.887783 AGATCCTCTGCAGTACCGTATG 59.112 50.000 14.67 0.00 0.00 2.39
400 405 1.399714 TCCTCTGCAGTACCGTATGG 58.600 55.000 14.67 0.00 42.84 2.74
412 417 1.922570 CCGTATGGTGCTGTAGTGTC 58.077 55.000 0.00 0.00 0.00 3.67
413 418 1.203758 CCGTATGGTGCTGTAGTGTCA 59.796 52.381 0.00 0.00 0.00 3.58
414 419 2.353307 CCGTATGGTGCTGTAGTGTCAA 60.353 50.000 0.00 0.00 0.00 3.18
415 420 3.521560 CGTATGGTGCTGTAGTGTCAAT 58.478 45.455 0.00 0.00 0.00 2.57
416 421 3.306973 CGTATGGTGCTGTAGTGTCAATG 59.693 47.826 0.00 0.00 0.00 2.82
417 422 3.701205 ATGGTGCTGTAGTGTCAATGA 57.299 42.857 0.00 0.00 0.00 2.57
418 423 2.766313 TGGTGCTGTAGTGTCAATGAC 58.234 47.619 6.41 6.41 0.00 3.06
419 424 2.103941 TGGTGCTGTAGTGTCAATGACA 59.896 45.455 12.63 12.63 40.50 3.58
420 425 3.244526 TGGTGCTGTAGTGTCAATGACAT 60.245 43.478 19.72 10.78 44.63 3.06
421 426 4.020662 TGGTGCTGTAGTGTCAATGACATA 60.021 41.667 19.72 9.85 44.63 2.29
422 427 5.118990 GGTGCTGTAGTGTCAATGACATAT 58.881 41.667 19.72 13.42 44.63 1.78
423 428 5.007039 GGTGCTGTAGTGTCAATGACATATG 59.993 44.000 19.72 9.34 44.63 1.78
424 429 5.007039 GTGCTGTAGTGTCAATGACATATGG 59.993 44.000 19.72 9.95 44.63 2.74
425 430 4.512944 GCTGTAGTGTCAATGACATATGGG 59.487 45.833 19.72 10.90 44.63 4.00
426 431 5.034852 TGTAGTGTCAATGACATATGGGG 57.965 43.478 19.72 0.00 44.63 4.96
427 432 4.473196 TGTAGTGTCAATGACATATGGGGT 59.527 41.667 19.72 1.81 44.63 4.95
428 433 4.156455 AGTGTCAATGACATATGGGGTC 57.844 45.455 19.72 3.89 44.63 4.46
434 439 1.507140 TGACATATGGGGTCAGGTCC 58.493 55.000 7.80 0.00 40.16 4.46
435 440 0.765510 GACATATGGGGTCAGGTCCC 59.234 60.000 7.80 0.00 46.31 4.46
441 446 2.677228 GGGTCAGGTCCCACATGG 59.323 66.667 0.00 0.00 46.30 3.66
442 447 2.044946 GGTCAGGTCCCACATGGC 60.045 66.667 0.00 0.00 33.19 4.40
443 448 2.756400 GTCAGGTCCCACATGGCA 59.244 61.111 0.00 0.00 34.27 4.92
444 449 1.377725 GTCAGGTCCCACATGGCAG 60.378 63.158 0.00 0.00 34.27 4.85
445 450 1.847506 TCAGGTCCCACATGGCAGT 60.848 57.895 0.00 0.00 29.72 4.40
446 451 1.676635 CAGGTCCCACATGGCAGTG 60.677 63.158 0.00 9.29 39.21 3.66
447 452 1.847506 AGGTCCCACATGGCAGTGA 60.848 57.895 15.61 0.00 42.05 3.41
448 453 1.675641 GGTCCCACATGGCAGTGAC 60.676 63.158 15.61 0.00 42.05 3.67
449 454 1.376466 GTCCCACATGGCAGTGACT 59.624 57.895 15.61 0.00 42.05 3.41
450 455 0.957395 GTCCCACATGGCAGTGACTG 60.957 60.000 8.52 8.52 42.05 3.51
451 456 1.073722 CCCACATGGCAGTGACTGT 59.926 57.895 14.82 2.12 42.05 3.55
452 457 0.324614 CCCACATGGCAGTGACTGTA 59.675 55.000 14.82 4.32 42.05 2.74
453 458 1.442769 CCACATGGCAGTGACTGTAC 58.557 55.000 14.82 8.35 42.05 2.90
454 459 1.270785 CCACATGGCAGTGACTGTACA 60.271 52.381 14.82 13.73 42.05 2.90
455 460 2.616256 CCACATGGCAGTGACTGTACAT 60.616 50.000 14.82 15.32 42.05 2.29
456 461 2.674852 CACATGGCAGTGACTGTACATC 59.325 50.000 14.82 0.00 42.05 3.06
457 462 2.302733 ACATGGCAGTGACTGTACATCA 59.697 45.455 14.82 5.93 32.27 3.07
458 463 2.455674 TGGCAGTGACTGTACATCAC 57.544 50.000 21.22 21.22 45.70 3.06
459 464 1.001974 TGGCAGTGACTGTACATCACC 59.998 52.381 23.34 14.98 46.38 4.02
460 465 1.350193 GCAGTGACTGTACATCACCG 58.650 55.000 23.34 18.31 46.38 4.94
461 466 1.336887 GCAGTGACTGTACATCACCGT 60.337 52.381 23.34 8.97 46.38 4.83
462 467 2.094906 GCAGTGACTGTACATCACCGTA 60.095 50.000 23.34 0.00 46.38 4.02
463 468 3.499048 CAGTGACTGTACATCACCGTAC 58.501 50.000 23.34 7.97 46.38 3.67
470 475 4.690184 TGTACATCACCGTACAGTACTG 57.310 45.455 21.44 21.44 45.18 2.74
471 476 2.649331 ACATCACCGTACAGTACTGC 57.351 50.000 22.90 6.61 0.00 4.40
472 477 1.890489 ACATCACCGTACAGTACTGCA 59.110 47.619 22.90 7.33 0.00 4.41
473 478 2.094700 ACATCACCGTACAGTACTGCAG 60.095 50.000 22.90 13.48 0.00 4.41
474 479 1.900245 TCACCGTACAGTACTGCAGA 58.100 50.000 23.35 5.71 0.00 4.26
475 480 1.810755 TCACCGTACAGTACTGCAGAG 59.189 52.381 23.35 11.80 0.00 3.35
476 481 1.135373 CACCGTACAGTACTGCAGAGG 60.135 57.143 23.35 20.78 0.00 3.69
477 482 1.271762 ACCGTACAGTACTGCAGAGGA 60.272 52.381 23.35 1.69 0.00 3.71
478 483 2.025155 CCGTACAGTACTGCAGAGGAT 58.975 52.381 23.35 3.96 0.00 3.24
479 484 2.033550 CCGTACAGTACTGCAGAGGATC 59.966 54.545 23.35 5.55 0.00 3.36
480 485 2.033550 CGTACAGTACTGCAGAGGATCC 59.966 54.545 23.35 2.48 33.66 3.36
481 486 2.541233 ACAGTACTGCAGAGGATCCT 57.459 50.000 23.35 16.13 33.66 3.24
482 487 3.671740 ACAGTACTGCAGAGGATCCTA 57.328 47.619 23.35 0.00 33.66 2.94
1546 3289 2.818169 GCCCGCCATATGGTCTCCA 61.818 63.158 22.79 0.00 38.19 3.86
2095 3861 0.172803 GGTCATCAACGGACTAGCGT 59.827 55.000 0.00 0.00 35.61 5.07
2152 3918 1.417517 TGCAGACCATGACTCTGTTGT 59.582 47.619 17.08 0.00 37.96 3.32
2194 3971 6.724441 TGGAGATATTTATCCGTACCAGATGT 59.276 38.462 3.80 0.00 38.52 3.06
2713 4531 3.118992 TGGAGATGCAGTACACACAGATC 60.119 47.826 0.00 0.00 0.00 2.75
2756 4574 2.016318 TGCCGTAAATTCTCATGCCAG 58.984 47.619 0.00 0.00 0.00 4.85
3239 6297 3.674528 CTCCTTTGAGTTCAGAGCAGA 57.325 47.619 0.00 0.00 33.70 4.26
3241 6299 3.995705 CTCCTTTGAGTTCAGAGCAGAAG 59.004 47.826 0.00 0.00 33.70 2.85
3242 6300 3.389329 TCCTTTGAGTTCAGAGCAGAAGT 59.611 43.478 0.00 0.00 34.00 3.01
3246 6304 4.244425 TGAGTTCAGAGCAGAAGTACAC 57.756 45.455 0.00 0.00 31.56 2.90
3247 6305 3.636764 TGAGTTCAGAGCAGAAGTACACA 59.363 43.478 0.00 0.00 31.56 3.72
3248 6306 4.281941 TGAGTTCAGAGCAGAAGTACACAT 59.718 41.667 0.00 0.00 31.56 3.21
3249 6307 4.815269 AGTTCAGAGCAGAAGTACACATC 58.185 43.478 0.00 0.00 29.67 3.06
3466 8589 5.036117 AGTTTATCAGACACACACCAACT 57.964 39.130 0.00 0.00 0.00 3.16
3878 9736 0.536006 GCCACTTCAAGGACTGCAGT 60.536 55.000 21.88 21.88 30.90 4.40
4257 10131 7.903145 TGATGTGTAGTGGTTATGTTTAGAGT 58.097 34.615 0.00 0.00 0.00 3.24
4297 10171 5.016051 TCTAGATGCAGATTCTGTTCACC 57.984 43.478 14.90 0.00 33.43 4.02
4644 10544 8.880991 AGACTATTTCTTGTACTAGGTTCTGA 57.119 34.615 4.46 0.00 0.00 3.27
4645 10545 9.310449 AGACTATTTCTTGTACTAGGTTCTGAA 57.690 33.333 4.46 0.00 0.00 3.02
4647 10547 9.877178 ACTATTTCTTGTACTAGGTTCTGAATG 57.123 33.333 4.46 0.00 0.00 2.67
4648 10548 7.617041 ATTTCTTGTACTAGGTTCTGAATGC 57.383 36.000 4.46 0.00 0.00 3.56
4649 10549 6.360370 TTCTTGTACTAGGTTCTGAATGCT 57.640 37.500 4.46 0.00 0.00 3.79
4650 10550 5.967088 TCTTGTACTAGGTTCTGAATGCTC 58.033 41.667 4.46 0.00 0.00 4.26
4651 10551 5.717178 TCTTGTACTAGGTTCTGAATGCTCT 59.283 40.000 4.46 0.00 0.00 4.09
4652 10552 5.584253 TGTACTAGGTTCTGAATGCTCTC 57.416 43.478 0.00 0.00 0.00 3.20
4653 10553 5.016831 TGTACTAGGTTCTGAATGCTCTCA 58.983 41.667 0.00 0.00 0.00 3.27
4654 10554 4.464069 ACTAGGTTCTGAATGCTCTCAC 57.536 45.455 0.00 0.00 0.00 3.51
4655 10555 4.093011 ACTAGGTTCTGAATGCTCTCACT 58.907 43.478 0.00 0.00 0.00 3.41
4656 10556 4.530161 ACTAGGTTCTGAATGCTCTCACTT 59.470 41.667 0.00 0.00 0.00 3.16
4657 10557 4.363991 AGGTTCTGAATGCTCTCACTTT 57.636 40.909 0.00 0.00 0.00 2.66
4658 10558 4.723309 AGGTTCTGAATGCTCTCACTTTT 58.277 39.130 0.00 0.00 0.00 2.27
4659 10559 5.136105 AGGTTCTGAATGCTCTCACTTTTT 58.864 37.500 0.00 0.00 0.00 1.94
4660 10560 5.240403 AGGTTCTGAATGCTCTCACTTTTTC 59.760 40.000 0.00 0.00 0.00 2.29
4661 10561 5.009010 GGTTCTGAATGCTCTCACTTTTTCA 59.991 40.000 0.00 0.00 0.00 2.69
4662 10562 5.679734 TCTGAATGCTCTCACTTTTTCAC 57.320 39.130 0.00 0.00 0.00 3.18
4663 10563 5.371526 TCTGAATGCTCTCACTTTTTCACT 58.628 37.500 0.00 0.00 0.00 3.41
4664 10564 5.237996 TCTGAATGCTCTCACTTTTTCACTG 59.762 40.000 0.00 0.00 0.00 3.66
4665 10565 3.911661 ATGCTCTCACTTTTTCACTGC 57.088 42.857 0.00 0.00 0.00 4.40
4666 10566 1.949525 TGCTCTCACTTTTTCACTGCC 59.050 47.619 0.00 0.00 0.00 4.85
4667 10567 1.069636 GCTCTCACTTTTTCACTGCCG 60.070 52.381 0.00 0.00 0.00 5.69
4668 10568 2.483876 CTCTCACTTTTTCACTGCCGA 58.516 47.619 0.00 0.00 0.00 5.54
4669 10569 3.070018 CTCTCACTTTTTCACTGCCGAT 58.930 45.455 0.00 0.00 0.00 4.18
4670 10570 2.807967 TCTCACTTTTTCACTGCCGATG 59.192 45.455 0.00 0.00 0.00 3.84
4671 10571 2.549754 CTCACTTTTTCACTGCCGATGT 59.450 45.455 0.00 0.00 0.00 3.06
4672 10572 2.948979 TCACTTTTTCACTGCCGATGTT 59.051 40.909 0.00 0.00 0.00 2.71
4673 10573 3.380004 TCACTTTTTCACTGCCGATGTTT 59.620 39.130 0.00 0.00 0.00 2.83
4674 10574 3.730715 CACTTTTTCACTGCCGATGTTTC 59.269 43.478 0.00 0.00 0.00 2.78
4675 10575 3.380004 ACTTTTTCACTGCCGATGTTTCA 59.620 39.130 0.00 0.00 0.00 2.69
4676 10576 3.624326 TTTTCACTGCCGATGTTTCAG 57.376 42.857 0.00 0.00 0.00 3.02
4715 10653 8.884124 TGATTTCTTTTGGATCCTGTAGATTT 57.116 30.769 14.23 3.52 34.42 2.17
4755 10693 6.299805 TCTTAAGACAGGTTAGCATCACAT 57.700 37.500 0.00 0.00 0.00 3.21
4883 10821 2.237143 CAAGGACAAGGATGTGGCTCTA 59.763 50.000 0.00 0.00 40.74 2.43
5344 11290 5.415077 TGGACGAACTGTTAAAAAGTTTCCA 59.585 36.000 15.44 15.44 40.09 3.53
5378 11328 1.737793 GTAGTTTCCCCGCACATTCAG 59.262 52.381 0.00 0.00 0.00 3.02
5379 11329 0.110486 AGTTTCCCCGCACATTCAGT 59.890 50.000 0.00 0.00 0.00 3.41
5380 11330 0.958822 GTTTCCCCGCACATTCAGTT 59.041 50.000 0.00 0.00 0.00 3.16
5381 11331 2.156098 GTTTCCCCGCACATTCAGTTA 58.844 47.619 0.00 0.00 0.00 2.24
5527 11486 7.281774 GGATTATGGTTGCAGGTATGATCTATG 59.718 40.741 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.200283 GAGGGAGACGCTGCCGAG 62.200 72.222 10.70 0.00 46.84 4.63
2 3 4.069232 TTGAGGGAGACGCTGCCG 62.069 66.667 10.70 0.00 46.84 5.69
3 4 2.435059 GTTGAGGGAGACGCTGCC 60.435 66.667 8.90 8.90 42.52 4.85
4 5 2.435059 GGTTGAGGGAGACGCTGC 60.435 66.667 0.00 0.00 0.00 5.25
5 6 0.970937 TAGGGTTGAGGGAGACGCTG 60.971 60.000 3.70 0.00 39.12 5.18
6 7 0.252103 TTAGGGTTGAGGGAGACGCT 60.252 55.000 0.00 0.00 41.26 5.07
7 8 0.108281 GTTAGGGTTGAGGGAGACGC 60.108 60.000 0.00 0.00 0.00 5.19
8 9 0.535797 GGTTAGGGTTGAGGGAGACG 59.464 60.000 0.00 0.00 0.00 4.18
9 10 0.910338 GGGTTAGGGTTGAGGGAGAC 59.090 60.000 0.00 0.00 0.00 3.36
10 11 0.797579 AGGGTTAGGGTTGAGGGAGA 59.202 55.000 0.00 0.00 0.00 3.71
11 12 2.117051 GTAGGGTTAGGGTTGAGGGAG 58.883 57.143 0.00 0.00 0.00 4.30
12 13 1.274011 GGTAGGGTTAGGGTTGAGGGA 60.274 57.143 0.00 0.00 0.00 4.20
13 14 1.210538 GGTAGGGTTAGGGTTGAGGG 58.789 60.000 0.00 0.00 0.00 4.30
14 15 1.558294 GTGGTAGGGTTAGGGTTGAGG 59.442 57.143 0.00 0.00 0.00 3.86
15 16 2.027469 GTGTGGTAGGGTTAGGGTTGAG 60.027 54.545 0.00 0.00 0.00 3.02
16 17 1.980036 GTGTGGTAGGGTTAGGGTTGA 59.020 52.381 0.00 0.00 0.00 3.18
17 18 1.700739 TGTGTGGTAGGGTTAGGGTTG 59.299 52.381 0.00 0.00 0.00 3.77
18 19 2.121478 TGTGTGGTAGGGTTAGGGTT 57.879 50.000 0.00 0.00 0.00 4.11
19 20 1.982958 CTTGTGTGGTAGGGTTAGGGT 59.017 52.381 0.00 0.00 0.00 4.34
20 21 1.280998 CCTTGTGTGGTAGGGTTAGGG 59.719 57.143 0.00 0.00 0.00 3.53
21 22 1.280998 CCCTTGTGTGGTAGGGTTAGG 59.719 57.143 0.00 0.00 45.12 2.69
22 23 2.781681 CCCTTGTGTGGTAGGGTTAG 57.218 55.000 0.00 0.00 45.12 2.34
29 30 2.560386 CCTACCCTACCCTTGTGTGGTA 60.560 54.545 0.00 0.00 37.31 3.25
30 31 1.652947 CTACCCTACCCTTGTGTGGT 58.347 55.000 0.00 0.00 39.97 4.16
31 32 0.909623 CCTACCCTACCCTTGTGTGG 59.090 60.000 0.00 0.00 0.00 4.17
32 33 0.252197 GCCTACCCTACCCTTGTGTG 59.748 60.000 0.00 0.00 0.00 3.82
33 34 1.262640 CGCCTACCCTACCCTTGTGT 61.263 60.000 0.00 0.00 0.00 3.72
34 35 1.520666 CGCCTACCCTACCCTTGTG 59.479 63.158 0.00 0.00 0.00 3.33
35 36 2.364780 GCGCCTACCCTACCCTTGT 61.365 63.158 0.00 0.00 0.00 3.16
36 37 1.906105 TTGCGCCTACCCTACCCTTG 61.906 60.000 4.18 0.00 0.00 3.61
37 38 1.614226 TTGCGCCTACCCTACCCTT 60.614 57.895 4.18 0.00 0.00 3.95
38 39 2.039951 TTGCGCCTACCCTACCCT 59.960 61.111 4.18 0.00 0.00 4.34
39 40 2.504519 CTTGCGCCTACCCTACCC 59.495 66.667 4.18 0.00 0.00 3.69
40 41 2.504519 CCTTGCGCCTACCCTACC 59.495 66.667 4.18 0.00 0.00 3.18
41 42 1.408453 ATCCCTTGCGCCTACCCTAC 61.408 60.000 4.18 0.00 0.00 3.18
42 43 1.074775 ATCCCTTGCGCCTACCCTA 60.075 57.895 4.18 0.00 0.00 3.53
43 44 2.366972 ATCCCTTGCGCCTACCCT 60.367 61.111 4.18 0.00 0.00 4.34
44 45 2.111251 GATCCCTTGCGCCTACCC 59.889 66.667 4.18 0.00 0.00 3.69
45 46 2.111251 GGATCCCTTGCGCCTACC 59.889 66.667 4.18 0.00 0.00 3.18
46 47 2.111251 GGGATCCCTTGCGCCTAC 59.889 66.667 24.69 0.00 0.00 3.18
47 48 3.546543 CGGGATCCCTTGCGCCTA 61.547 66.667 28.42 0.00 0.00 3.93
51 52 4.891727 CGACCGGGATCCCTTGCG 62.892 72.222 28.42 22.35 0.00 4.85
53 54 4.547367 GGCGACCGGGATCCCTTG 62.547 72.222 28.42 20.67 0.00 3.61
54 55 4.798682 AGGCGACCGGGATCCCTT 62.799 66.667 28.42 15.32 0.00 3.95
58 59 3.155167 AAGGAGGCGACCGGGATC 61.155 66.667 6.32 0.00 34.73 3.36
59 60 3.470888 CAAGGAGGCGACCGGGAT 61.471 66.667 6.32 0.00 34.73 3.85
60 61 3.976490 ATCAAGGAGGCGACCGGGA 62.976 63.158 6.32 0.00 34.73 5.14
61 62 3.447025 GATCAAGGAGGCGACCGGG 62.447 68.421 6.32 0.00 34.73 5.73
62 63 2.107141 GATCAAGGAGGCGACCGG 59.893 66.667 0.00 0.00 34.73 5.28
63 64 2.278857 CGATCAAGGAGGCGACCG 60.279 66.667 0.00 0.00 34.73 4.79
64 65 2.586357 GCGATCAAGGAGGCGACC 60.586 66.667 0.00 0.00 0.00 4.79
65 66 2.586357 GGCGATCAAGGAGGCGAC 60.586 66.667 0.00 0.00 0.00 5.19
66 67 2.759973 AGGCGATCAAGGAGGCGA 60.760 61.111 0.00 0.00 35.47 5.54
67 68 2.374830 ATCAGGCGATCAAGGAGGCG 62.375 60.000 0.00 0.00 35.47 5.52
68 69 0.883814 CATCAGGCGATCAAGGAGGC 60.884 60.000 0.00 0.00 0.00 4.70
69 70 0.883814 GCATCAGGCGATCAAGGAGG 60.884 60.000 0.00 0.00 0.00 4.30
70 71 2.614581 GCATCAGGCGATCAAGGAG 58.385 57.895 0.00 0.00 0.00 3.69
71 72 4.863707 GCATCAGGCGATCAAGGA 57.136 55.556 0.00 0.00 0.00 3.36
80 81 2.246719 AAAGTAGGATCGCATCAGGC 57.753 50.000 0.00 0.00 39.90 4.85
81 82 3.246226 CGAAAAAGTAGGATCGCATCAGG 59.754 47.826 0.00 0.00 0.00 3.86
82 83 4.443850 CGAAAAAGTAGGATCGCATCAG 57.556 45.455 0.00 0.00 0.00 2.90
88 89 2.351726 CCCTTGCGAAAAAGTAGGATCG 59.648 50.000 0.00 0.00 38.28 3.69
89 90 2.097629 GCCCTTGCGAAAAAGTAGGATC 59.902 50.000 0.00 0.00 0.00 3.36
90 91 2.092323 GCCCTTGCGAAAAAGTAGGAT 58.908 47.619 0.00 0.00 0.00 3.24
91 92 1.202830 TGCCCTTGCGAAAAAGTAGGA 60.203 47.619 0.00 0.00 41.78 2.94
92 93 1.243902 TGCCCTTGCGAAAAAGTAGG 58.756 50.000 0.00 0.00 41.78 3.18
93 94 2.034053 TGTTGCCCTTGCGAAAAAGTAG 59.966 45.455 0.00 0.00 41.78 2.57
94 95 2.025155 TGTTGCCCTTGCGAAAAAGTA 58.975 42.857 0.00 0.00 41.78 2.24
95 96 0.820871 TGTTGCCCTTGCGAAAAAGT 59.179 45.000 0.00 0.00 41.78 2.66
96 97 1.933247 TTGTTGCCCTTGCGAAAAAG 58.067 45.000 0.00 0.00 41.78 2.27
97 98 2.003301 GTTTGTTGCCCTTGCGAAAAA 58.997 42.857 0.00 0.00 41.78 1.94
98 99 1.205893 AGTTTGTTGCCCTTGCGAAAA 59.794 42.857 0.00 0.00 41.78 2.29
99 100 0.820871 AGTTTGTTGCCCTTGCGAAA 59.179 45.000 0.00 0.00 41.78 3.46
100 101 0.820871 AAGTTTGTTGCCCTTGCGAA 59.179 45.000 0.00 0.00 41.78 4.70
101 102 1.681538 TAAGTTTGTTGCCCTTGCGA 58.318 45.000 0.00 0.00 41.78 5.10
102 103 2.228822 AGATAAGTTTGTTGCCCTTGCG 59.771 45.455 0.00 0.00 41.78 4.85
103 104 3.942130 AGATAAGTTTGTTGCCCTTGC 57.058 42.857 0.00 0.00 38.26 4.01
104 105 5.010012 ACTGAAGATAAGTTTGTTGCCCTTG 59.990 40.000 0.00 0.00 0.00 3.61
105 106 5.140454 ACTGAAGATAAGTTTGTTGCCCTT 58.860 37.500 0.00 0.00 0.00 3.95
106 107 4.729868 ACTGAAGATAAGTTTGTTGCCCT 58.270 39.130 0.00 0.00 0.00 5.19
107 108 4.762251 AGACTGAAGATAAGTTTGTTGCCC 59.238 41.667 0.00 0.00 0.00 5.36
108 109 5.948992 AGACTGAAGATAAGTTTGTTGCC 57.051 39.130 0.00 0.00 0.00 4.52
109 110 6.575201 CGAAAGACTGAAGATAAGTTTGTTGC 59.425 38.462 0.00 0.00 0.00 4.17
110 111 7.072030 CCGAAAGACTGAAGATAAGTTTGTTG 58.928 38.462 0.00 0.00 0.00 3.33
111 112 6.766467 ACCGAAAGACTGAAGATAAGTTTGTT 59.234 34.615 0.00 0.00 0.00 2.83
112 113 6.289064 ACCGAAAGACTGAAGATAAGTTTGT 58.711 36.000 0.00 0.00 0.00 2.83
113 114 6.787085 ACCGAAAGACTGAAGATAAGTTTG 57.213 37.500 0.00 0.00 0.00 2.93
114 115 6.204882 CCAACCGAAAGACTGAAGATAAGTTT 59.795 38.462 0.00 0.00 0.00 2.66
115 116 5.701290 CCAACCGAAAGACTGAAGATAAGTT 59.299 40.000 0.00 0.00 0.00 2.66
116 117 5.221661 ACCAACCGAAAGACTGAAGATAAGT 60.222 40.000 0.00 0.00 0.00 2.24
117 118 5.238583 ACCAACCGAAAGACTGAAGATAAG 58.761 41.667 0.00 0.00 0.00 1.73
118 119 5.223449 ACCAACCGAAAGACTGAAGATAA 57.777 39.130 0.00 0.00 0.00 1.75
119 120 4.617530 CGACCAACCGAAAGACTGAAGATA 60.618 45.833 0.00 0.00 0.00 1.98
120 121 3.665190 GACCAACCGAAAGACTGAAGAT 58.335 45.455 0.00 0.00 0.00 2.40
121 122 2.545113 CGACCAACCGAAAGACTGAAGA 60.545 50.000 0.00 0.00 0.00 2.87
122 123 1.792949 CGACCAACCGAAAGACTGAAG 59.207 52.381 0.00 0.00 0.00 3.02
123 124 1.137479 ACGACCAACCGAAAGACTGAA 59.863 47.619 0.00 0.00 0.00 3.02
124 125 0.748450 ACGACCAACCGAAAGACTGA 59.252 50.000 0.00 0.00 0.00 3.41
125 126 1.137513 GACGACCAACCGAAAGACTG 58.862 55.000 0.00 0.00 0.00 3.51
156 157 0.613260 TTAAGGTCGTGAGGCATGCT 59.387 50.000 18.92 3.20 37.54 3.79
177 178 5.293079 CCAACAAAATGTTTGTGGGTACAAG 59.707 40.000 16.18 0.00 46.63 3.16
288 293 1.685765 TAGAGGATGTGGCGTGGCT 60.686 57.895 0.00 0.00 0.00 4.75
362 367 0.916358 ATCTCAACCCAGGGAGGTGG 60.916 60.000 14.54 2.12 40.05 4.61
363 368 0.543749 GATCTCAACCCAGGGAGGTG 59.456 60.000 14.54 7.39 40.05 4.00
364 369 0.621862 GGATCTCAACCCAGGGAGGT 60.622 60.000 14.54 0.00 44.00 3.85
365 370 0.327000 AGGATCTCAACCCAGGGAGG 60.327 60.000 14.54 3.28 37.03 4.30
366 371 1.127343 GAGGATCTCAACCCAGGGAG 58.873 60.000 14.54 4.16 0.00 4.30
367 372 3.324246 GAGGATCTCAACCCAGGGA 57.676 57.895 14.54 0.00 0.00 4.20
379 384 2.029828 CCATACGGTACTGCAGAGGATC 60.030 54.545 23.35 4.41 0.00 3.36
380 385 1.964223 CCATACGGTACTGCAGAGGAT 59.036 52.381 23.35 7.89 0.00 3.24
381 386 1.341679 ACCATACGGTACTGCAGAGGA 60.342 52.381 23.35 5.65 46.71 3.71
382 387 1.112113 ACCATACGGTACTGCAGAGG 58.888 55.000 23.35 8.56 46.71 3.69
383 388 1.802880 GCACCATACGGTACTGCAGAG 60.803 57.143 23.35 10.96 46.94 3.35
384 389 0.174845 GCACCATACGGTACTGCAGA 59.825 55.000 23.35 0.48 46.94 4.26
385 390 0.175760 AGCACCATACGGTACTGCAG 59.824 55.000 13.48 13.48 46.94 4.41
386 391 2.282827 AGCACCATACGGTACTGCA 58.717 52.632 0.23 0.00 46.94 4.41
389 394 2.426024 CACTACAGCACCATACGGTACT 59.574 50.000 0.00 0.00 46.94 2.73
390 395 2.165030 ACACTACAGCACCATACGGTAC 59.835 50.000 0.00 0.00 46.94 3.34
391 396 2.424601 GACACTACAGCACCATACGGTA 59.575 50.000 0.00 0.00 46.94 4.02
393 398 1.203758 TGACACTACAGCACCATACGG 59.796 52.381 0.00 0.00 38.77 4.02
394 399 2.647529 TGACACTACAGCACCATACG 57.352 50.000 0.00 0.00 0.00 3.06
395 400 4.330074 GTCATTGACACTACAGCACCATAC 59.670 45.833 11.93 0.00 32.09 2.39
396 401 4.020662 TGTCATTGACACTACAGCACCATA 60.021 41.667 15.41 0.00 37.67 2.74
397 402 3.244526 TGTCATTGACACTACAGCACCAT 60.245 43.478 15.41 0.00 37.67 3.55
398 403 2.103941 TGTCATTGACACTACAGCACCA 59.896 45.455 15.41 0.00 37.67 4.17
399 404 2.766313 TGTCATTGACACTACAGCACC 58.234 47.619 15.41 0.00 37.67 5.01
400 405 5.007039 CCATATGTCATTGACACTACAGCAC 59.993 44.000 21.19 0.00 45.65 4.40
401 406 5.118286 CCATATGTCATTGACACTACAGCA 58.882 41.667 21.19 0.00 45.65 4.41
402 407 4.512944 CCCATATGTCATTGACACTACAGC 59.487 45.833 21.19 0.00 45.65 4.40
403 408 5.059161 CCCCATATGTCATTGACACTACAG 58.941 45.833 21.19 10.50 45.65 2.74
404 409 4.473196 ACCCCATATGTCATTGACACTACA 59.527 41.667 21.19 7.95 45.65 2.74
405 410 5.036117 ACCCCATATGTCATTGACACTAC 57.964 43.478 21.19 0.00 45.65 2.73
406 411 4.719273 TGACCCCATATGTCATTGACACTA 59.281 41.667 21.19 14.33 45.65 2.74
407 412 3.523157 TGACCCCATATGTCATTGACACT 59.477 43.478 21.19 12.80 45.65 3.55
408 413 3.879295 CTGACCCCATATGTCATTGACAC 59.121 47.826 21.19 7.16 45.65 3.67
409 414 3.117926 CCTGACCCCATATGTCATTGACA 60.118 47.826 21.05 21.05 46.90 3.58
410 415 3.117888 ACCTGACCCCATATGTCATTGAC 60.118 47.826 9.93 9.93 41.58 3.18
411 416 3.122480 ACCTGACCCCATATGTCATTGA 58.878 45.455 1.24 0.00 41.58 2.57
412 417 3.480470 GACCTGACCCCATATGTCATTG 58.520 50.000 1.24 0.00 41.58 2.82
413 418 2.443255 GGACCTGACCCCATATGTCATT 59.557 50.000 1.24 0.00 41.58 2.57
414 419 2.057922 GGACCTGACCCCATATGTCAT 58.942 52.381 1.24 0.00 41.58 3.06
415 420 1.507140 GGACCTGACCCCATATGTCA 58.493 55.000 1.24 0.00 40.28 3.58
416 421 0.765510 GGGACCTGACCCCATATGTC 59.234 60.000 1.24 0.00 43.81 3.06
417 422 2.945718 GGGACCTGACCCCATATGT 58.054 57.895 1.24 0.00 43.81 2.29
425 430 2.044946 GCCATGTGGGACCTGACC 60.045 66.667 0.54 0.00 40.01 4.02
426 431 1.377725 CTGCCATGTGGGACCTGAC 60.378 63.158 0.54 0.00 40.01 3.51
427 432 1.847506 ACTGCCATGTGGGACCTGA 60.848 57.895 0.54 0.00 40.01 3.86
428 433 1.676635 CACTGCCATGTGGGACCTG 60.677 63.158 0.54 0.00 40.01 4.00
429 434 1.847506 TCACTGCCATGTGGGACCT 60.848 57.895 0.54 0.00 40.01 3.85
430 435 1.675641 GTCACTGCCATGTGGGACC 60.676 63.158 0.54 0.00 40.01 4.46
431 436 0.957395 CAGTCACTGCCATGTGGGAC 60.957 60.000 0.00 5.25 40.01 4.46
432 437 1.376086 CAGTCACTGCCATGTGGGA 59.624 57.895 0.00 0.00 40.01 4.37
433 438 0.324614 TACAGTCACTGCCATGTGGG 59.675 55.000 4.13 0.00 38.40 4.61
434 439 1.270785 TGTACAGTCACTGCCATGTGG 60.271 52.381 4.13 0.00 38.40 4.17
435 440 2.168326 TGTACAGTCACTGCCATGTG 57.832 50.000 4.13 0.00 39.15 3.21
436 441 2.302733 TGATGTACAGTCACTGCCATGT 59.697 45.455 13.80 0.00 34.37 3.21
437 442 2.674852 GTGATGTACAGTCACTGCCATG 59.325 50.000 21.36 0.00 42.04 3.66
438 443 2.355108 GGTGATGTACAGTCACTGCCAT 60.355 50.000 24.68 7.52 44.15 4.40
439 444 1.001974 GGTGATGTACAGTCACTGCCA 59.998 52.381 24.68 2.04 44.15 4.92
440 445 1.726853 GGTGATGTACAGTCACTGCC 58.273 55.000 24.68 13.51 44.15 4.85
441 446 1.350193 CGGTGATGTACAGTCACTGC 58.650 55.000 24.68 15.16 43.61 4.40
443 448 3.844577 GTACGGTGATGTACAGTCACT 57.155 47.619 24.68 15.52 44.15 3.41
450 455 3.119743 TGCAGTACTGTACGGTGATGTAC 60.120 47.826 23.44 7.07 43.95 2.90
451 456 3.083293 TGCAGTACTGTACGGTGATGTA 58.917 45.455 23.44 11.87 0.00 2.29
452 457 1.890489 TGCAGTACTGTACGGTGATGT 59.110 47.619 23.44 0.00 0.00 3.06
453 458 2.163613 TCTGCAGTACTGTACGGTGATG 59.836 50.000 23.44 15.53 0.00 3.07
454 459 2.423892 CTCTGCAGTACTGTACGGTGAT 59.576 50.000 23.44 2.68 0.00 3.06
455 460 1.810755 CTCTGCAGTACTGTACGGTGA 59.189 52.381 23.44 11.75 0.00 4.02
456 461 1.135373 CCTCTGCAGTACTGTACGGTG 60.135 57.143 23.44 12.98 0.00 4.94
457 462 1.174783 CCTCTGCAGTACTGTACGGT 58.825 55.000 23.44 12.92 0.00 4.83
458 463 1.460504 TCCTCTGCAGTACTGTACGG 58.539 55.000 23.44 18.45 0.00 4.02
459 464 2.033550 GGATCCTCTGCAGTACTGTACG 59.966 54.545 23.44 13.02 0.00 3.67
460 465 3.292460 AGGATCCTCTGCAGTACTGTAC 58.708 50.000 23.44 9.93 0.00 2.90
461 466 3.671740 AGGATCCTCTGCAGTACTGTA 57.328 47.619 23.44 18.51 0.00 2.74
462 467 2.541233 AGGATCCTCTGCAGTACTGT 57.459 50.000 23.44 2.01 0.00 3.55
463 468 3.068873 GGTTAGGATCCTCTGCAGTACTG 59.931 52.174 20.22 18.93 0.00 2.74
464 469 3.301274 GGTTAGGATCCTCTGCAGTACT 58.699 50.000 20.22 2.48 0.00 2.73
465 470 2.365941 GGGTTAGGATCCTCTGCAGTAC 59.634 54.545 20.22 6.17 0.00 2.73
466 471 2.679082 GGGTTAGGATCCTCTGCAGTA 58.321 52.381 20.22 0.00 0.00 2.74
467 472 1.501582 GGGTTAGGATCCTCTGCAGT 58.498 55.000 20.22 0.00 0.00 4.40
468 473 0.761802 GGGGTTAGGATCCTCTGCAG 59.238 60.000 20.22 7.63 0.00 4.41
469 474 0.044092 TGGGGTTAGGATCCTCTGCA 59.956 55.000 20.22 0.00 0.00 4.41
470 475 0.470341 GTGGGGTTAGGATCCTCTGC 59.530 60.000 20.22 9.52 0.00 4.26
471 476 1.132500 GGTGGGGTTAGGATCCTCTG 58.868 60.000 20.22 0.00 0.00 3.35
472 477 1.027815 AGGTGGGGTTAGGATCCTCT 58.972 55.000 20.22 3.19 0.00 3.69
473 478 1.425694 GAGGTGGGGTTAGGATCCTC 58.574 60.000 20.22 4.44 35.45 3.71
474 479 0.029989 GGAGGTGGGGTTAGGATCCT 60.030 60.000 20.48 20.48 0.00 3.24
475 480 1.060743 GGGAGGTGGGGTTAGGATCC 61.061 65.000 2.48 2.48 0.00 3.36
476 481 1.060743 GGGGAGGTGGGGTTAGGATC 61.061 65.000 0.00 0.00 0.00 3.36
477 482 1.005690 GGGGAGGTGGGGTTAGGAT 59.994 63.158 0.00 0.00 0.00 3.24
478 483 2.188947 AGGGGAGGTGGGGTTAGGA 61.189 63.158 0.00 0.00 0.00 2.94
479 484 2.001269 CAGGGGAGGTGGGGTTAGG 61.001 68.421 0.00 0.00 0.00 2.69
480 485 2.680370 GCAGGGGAGGTGGGGTTAG 61.680 68.421 0.00 0.00 0.00 2.34
481 486 2.612746 GCAGGGGAGGTGGGGTTA 60.613 66.667 0.00 0.00 0.00 2.85
980 988 4.778143 GAGGTGGCGCCGTTGGAT 62.778 66.667 23.90 3.76 43.70 3.41
1031 1039 2.517875 GCTGCTCGGCCATCCAAT 60.518 61.111 2.24 0.00 0.00 3.16
1033 1041 4.783621 GTGCTGCTCGGCCATCCA 62.784 66.667 2.24 0.00 0.00 3.41
1795 3542 1.552337 GTGCTCTGAGAACTCCATGGA 59.448 52.381 15.27 15.27 0.00 3.41
2152 3918 3.454447 TCTCCACCAGACTCAAACTTTGA 59.546 43.478 4.16 4.16 38.17 2.69
2194 3971 4.624364 CACAGCAGGTGGCCACGA 62.624 66.667 29.08 0.00 46.50 4.35
2713 4531 4.347453 GGCTGCCGCTGTTGTTGG 62.347 66.667 1.35 0.00 36.09 3.77
2756 4574 2.004733 GGTATGTCTTTGTGGTACCGC 58.995 52.381 18.93 18.93 0.00 5.68
2830 5865 6.128336 CCAGTTTCTTCTTCTGCAGATAAGTG 60.128 42.308 26.38 20.20 0.00 3.16
3238 6296 1.740025 GGCTTGGCTGATGTGTACTTC 59.260 52.381 0.00 0.00 0.00 3.01
3239 6297 1.352352 AGGCTTGGCTGATGTGTACTT 59.648 47.619 0.00 0.00 0.00 2.24
3241 6299 1.826385 AAGGCTTGGCTGATGTGTAC 58.174 50.000 0.00 0.00 0.00 2.90
3242 6300 2.584835 AAAGGCTTGGCTGATGTGTA 57.415 45.000 0.00 0.00 0.00 2.90
3246 6304 1.753073 CCCTAAAAGGCTTGGCTGATG 59.247 52.381 0.00 0.00 32.73 3.07
3247 6305 1.640670 TCCCTAAAAGGCTTGGCTGAT 59.359 47.619 0.00 0.00 32.73 2.90
3248 6306 1.072266 TCCCTAAAAGGCTTGGCTGA 58.928 50.000 0.00 0.00 32.73 4.26
3249 6307 1.821136 CTTCCCTAAAAGGCTTGGCTG 59.179 52.381 0.00 0.00 32.73 4.85
3466 8589 3.554752 GGAAAGCTACAAAATGGCAAGCA 60.555 43.478 9.08 0.00 37.23 3.91
3878 9736 3.058450 CACCACCGTTGTAAATGTCGTA 58.942 45.455 0.00 0.00 0.00 3.43
3987 9848 5.833406 TGTCTCTGAAATTCAAAGTTGCA 57.167 34.783 0.00 0.00 0.00 4.08
4203 10068 1.746220 GCCAGGTTACACACACACAAA 59.254 47.619 0.00 0.00 0.00 2.83
4257 10131 7.448420 CATCTAGAAGAAGAATTGGAGCCATA 58.552 38.462 0.00 0.00 0.00 2.74
4458 10340 3.874383 TCAGGACATGGGAAACTGAAA 57.126 42.857 0.00 0.00 35.45 2.69
4459 10341 3.874383 TTCAGGACATGGGAAACTGAA 57.126 42.857 12.58 12.58 43.54 3.02
4495 10383 5.252969 TGTTGGAGATATGCAAAATGCTC 57.747 39.130 0.00 0.00 45.31 4.26
4644 10544 3.005155 GGCAGTGAAAAAGTGAGAGCATT 59.995 43.478 0.00 0.00 0.00 3.56
4645 10545 2.555757 GGCAGTGAAAAAGTGAGAGCAT 59.444 45.455 0.00 0.00 0.00 3.79
4646 10546 1.949525 GGCAGTGAAAAAGTGAGAGCA 59.050 47.619 0.00 0.00 0.00 4.26
4647 10547 1.069636 CGGCAGTGAAAAAGTGAGAGC 60.070 52.381 0.00 0.00 0.00 4.09
4648 10548 2.483876 TCGGCAGTGAAAAAGTGAGAG 58.516 47.619 0.00 0.00 0.00 3.20
4649 10549 2.613026 TCGGCAGTGAAAAAGTGAGA 57.387 45.000 0.00 0.00 0.00 3.27
4650 10550 2.549754 ACATCGGCAGTGAAAAAGTGAG 59.450 45.455 0.00 0.00 0.00 3.51
4651 10551 2.571212 ACATCGGCAGTGAAAAAGTGA 58.429 42.857 0.00 0.00 0.00 3.41
4652 10552 3.354089 AACATCGGCAGTGAAAAAGTG 57.646 42.857 0.00 0.00 0.00 3.16
4653 10553 3.380004 TGAAACATCGGCAGTGAAAAAGT 59.620 39.130 0.00 0.00 0.00 2.66
4654 10554 3.963665 TGAAACATCGGCAGTGAAAAAG 58.036 40.909 0.00 0.00 0.00 2.27
4655 10555 3.629855 TCTGAAACATCGGCAGTGAAAAA 59.370 39.130 0.00 0.00 0.00 1.94
4656 10556 3.210227 TCTGAAACATCGGCAGTGAAAA 58.790 40.909 0.00 0.00 0.00 2.29
4657 10557 2.844946 TCTGAAACATCGGCAGTGAAA 58.155 42.857 0.00 0.00 0.00 2.69
4658 10558 2.542020 TCTGAAACATCGGCAGTGAA 57.458 45.000 0.00 0.00 0.00 3.18
4659 10559 2.289631 ACATCTGAAACATCGGCAGTGA 60.290 45.455 0.00 0.00 0.00 3.41
4660 10560 2.079158 ACATCTGAAACATCGGCAGTG 58.921 47.619 0.00 0.00 0.00 3.66
4661 10561 2.479566 ACATCTGAAACATCGGCAGT 57.520 45.000 0.00 0.00 0.00 4.40
4662 10562 3.684305 TGTTACATCTGAAACATCGGCAG 59.316 43.478 0.00 0.00 30.88 4.85
4663 10563 3.669536 TGTTACATCTGAAACATCGGCA 58.330 40.909 0.00 0.00 30.88 5.69
4664 10564 4.332543 TCATGTTACATCTGAAACATCGGC 59.667 41.667 0.00 0.00 42.83 5.54
4665 10565 6.092670 AGTTCATGTTACATCTGAAACATCGG 59.907 38.462 3.35 0.00 42.83 4.18
4666 10566 6.957635 CAGTTCATGTTACATCTGAAACATCG 59.042 38.462 6.67 1.97 42.83 3.84
4667 10567 8.032952 TCAGTTCATGTTACATCTGAAACATC 57.967 34.615 11.26 0.00 42.83 3.06
4668 10568 7.984422 TCAGTTCATGTTACATCTGAAACAT 57.016 32.000 11.26 1.36 44.94 2.71
4669 10569 7.984422 ATCAGTTCATGTTACATCTGAAACA 57.016 32.000 15.77 0.00 39.73 2.83
4670 10570 9.334693 GAAATCAGTTCATGTTACATCTGAAAC 57.665 33.333 15.77 9.22 35.94 2.78
4671 10571 9.288576 AGAAATCAGTTCATGTTACATCTGAAA 57.711 29.630 15.77 0.00 38.86 2.69
4672 10572 8.853077 AGAAATCAGTTCATGTTACATCTGAA 57.147 30.769 15.77 7.98 38.86 3.02
4673 10573 8.853077 AAGAAATCAGTTCATGTTACATCTGA 57.147 30.769 14.65 14.65 38.86 3.27
4674 10574 9.903682 AAAAGAAATCAGTTCATGTTACATCTG 57.096 29.630 0.00 0.50 38.86 2.90
4675 10575 9.903682 CAAAAGAAATCAGTTCATGTTACATCT 57.096 29.630 0.00 0.00 38.86 2.90
4676 10576 9.132521 CCAAAAGAAATCAGTTCATGTTACATC 57.867 33.333 0.00 0.00 38.86 3.06
4715 10653 7.122501 TGTCTTAAGATATTGAAATGCCTGCAA 59.877 33.333 8.75 0.00 0.00 4.08
4755 10693 3.133183 TCACTACAGTACAGGCAACAACA 59.867 43.478 0.00 0.00 41.41 3.33
4883 10821 1.277557 CTGCTAGGCTTCTTCAGTGGT 59.722 52.381 0.00 0.00 0.00 4.16
5069 11007 0.108615 GAGGCTAGAAGCTGCGAACA 60.109 55.000 0.00 0.00 41.99 3.18
5070 11008 0.174617 AGAGGCTAGAAGCTGCGAAC 59.825 55.000 0.00 0.00 41.99 3.95
5344 11290 0.750850 AACTACGTCACAGGTGCACT 59.249 50.000 17.98 0.00 0.00 4.40
5527 11486 0.817013 TCGGGATTTGCCATGAAAGC 59.183 50.000 0.00 0.00 38.95 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.