Multiple sequence alignment - TraesCS1B01G048900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G048900 chr1B 100.000 2554 0 0 1 2554 28625174 28627727 0.000000e+00 4717.0
1 TraesCS1B01G048900 chr1B 86.424 825 68 29 758 1556 28762629 28763435 0.000000e+00 863.0
2 TraesCS1B01G048900 chr1D 90.019 1613 115 26 144 1732 19150184 19151774 0.000000e+00 2045.0
3 TraesCS1B01G048900 chr1D 86.194 833 67 35 758 1556 19184790 19185608 0.000000e+00 857.0
4 TraesCS1B01G048900 chr1D 90.863 394 32 1 144 533 19149290 19149683 2.250000e-145 525.0
5 TraesCS1B01G048900 chr1D 83.857 446 39 15 1740 2162 19151823 19152258 6.620000e-106 394.0
6 TraesCS1B01G048900 chr1D 91.781 73 6 0 2196 2268 19152361 19152433 4.500000e-18 102.0
7 TraesCS1B01G048900 chr1A 88.100 1437 106 36 626 2036 20997778 20999175 0.000000e+00 1646.0
8 TraesCS1B01G048900 chr1A 86.435 833 63 35 758 1566 21022569 21023375 0.000000e+00 867.0
9 TraesCS1B01G048900 chr1A 94.915 59 3 0 86 144 589852129 589852071 2.710000e-15 93.5
10 TraesCS1B01G048900 chr6B 83.423 555 57 23 1004 1538 38877722 38878261 1.370000e-132 483.0
11 TraesCS1B01G048900 chr6B 82.365 482 62 19 1004 1474 29060610 29060141 5.120000e-107 398.0
12 TraesCS1B01G048900 chr6D 83.239 531 64 14 1023 1538 24001579 24002099 4.980000e-127 464.0
13 TraesCS1B01G048900 chr6D 83.678 484 55 20 1006 1474 16523195 16522721 3.900000e-118 435.0
14 TraesCS1B01G048900 chr6D 83.058 484 57 20 1006 1474 16502894 16503367 1.410000e-112 416.0
15 TraesCS1B01G048900 chr3B 83.711 485 56 20 1051 1518 829113027 829113505 1.090000e-118 436.0
16 TraesCS1B01G048900 chr6A 80.586 546 76 25 1006 1538 16700963 16701491 6.620000e-106 394.0
17 TraesCS1B01G048900 chr7A 91.935 186 15 0 1295 1480 632581491 632581306 7.010000e-66 261.0
18 TraesCS1B01G048900 chr5B 96.552 145 5 0 1 145 404071417 404071561 9.130000e-60 241.0
19 TraesCS1B01G048900 chr5B 96.552 145 4 1 1 145 529042594 529042737 3.280000e-59 239.0
20 TraesCS1B01G048900 chr7B 92.361 144 11 0 1 144 555214991 555215134 3.330000e-49 206.0
21 TraesCS1B01G048900 chr5A 91.034 145 12 1 1 144 326060802 326060946 7.210000e-46 195.0
22 TraesCS1B01G048900 chrUn 90.345 145 14 0 1 145 474715520 474715376 9.330000e-45 191.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G048900 chr1B 28625174 28627727 2553 False 4717.0 4717 100.000 1 2554 1 chr1B.!!$F1 2553
1 TraesCS1B01G048900 chr1B 28762629 28763435 806 False 863.0 863 86.424 758 1556 1 chr1B.!!$F2 798
2 TraesCS1B01G048900 chr1D 19184790 19185608 818 False 857.0 857 86.194 758 1556 1 chr1D.!!$F1 798
3 TraesCS1B01G048900 chr1D 19149290 19152433 3143 False 766.5 2045 89.130 144 2268 4 chr1D.!!$F2 2124
4 TraesCS1B01G048900 chr1A 20997778 20999175 1397 False 1646.0 1646 88.100 626 2036 1 chr1A.!!$F1 1410
5 TraesCS1B01G048900 chr1A 21022569 21023375 806 False 867.0 867 86.435 758 1566 1 chr1A.!!$F2 808
6 TraesCS1B01G048900 chr6B 38877722 38878261 539 False 483.0 483 83.423 1004 1538 1 chr6B.!!$F1 534
7 TraesCS1B01G048900 chr6D 24001579 24002099 520 False 464.0 464 83.239 1023 1538 1 chr6D.!!$F2 515
8 TraesCS1B01G048900 chr6A 16700963 16701491 528 False 394.0 394 80.586 1006 1538 1 chr6A.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.041312 CGGGTTCAAGTTTGCACGAG 60.041 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2002 3043 0.037419 AAAATGTGTGCCGCCCAATC 60.037 50.0 0.0 0.0 0.0 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.280079 GCCTTCCCCAATCCCCAG 59.720 66.667 0.00 0.00 0.00 4.45
18 19 2.626467 GCCTTCCCCAATCCCCAGT 61.626 63.158 0.00 0.00 0.00 4.00
19 20 2.096168 CCTTCCCCAATCCCCAGTT 58.904 57.895 0.00 0.00 0.00 3.16
20 21 1.304891 CCTTCCCCAATCCCCAGTTA 58.695 55.000 0.00 0.00 0.00 2.24
21 22 1.063942 CCTTCCCCAATCCCCAGTTAC 60.064 57.143 0.00 0.00 0.00 2.50
22 23 1.004436 TTCCCCAATCCCCAGTTACC 58.996 55.000 0.00 0.00 0.00 2.85
23 24 0.922243 TCCCCAATCCCCAGTTACCC 60.922 60.000 0.00 0.00 0.00 3.69
24 25 1.618586 CCCAATCCCCAGTTACCCC 59.381 63.158 0.00 0.00 0.00 4.95
25 26 0.924226 CCCAATCCCCAGTTACCCCT 60.924 60.000 0.00 0.00 0.00 4.79
26 27 0.258774 CCAATCCCCAGTTACCCCTG 59.741 60.000 0.00 0.00 0.00 4.45
27 28 1.295020 CAATCCCCAGTTACCCCTGA 58.705 55.000 0.00 0.00 34.23 3.86
28 29 1.212935 CAATCCCCAGTTACCCCTGAG 59.787 57.143 0.00 0.00 34.23 3.35
29 30 0.988678 ATCCCCAGTTACCCCTGAGC 60.989 60.000 0.00 0.00 34.23 4.26
30 31 2.584608 CCCAGTTACCCCTGAGCG 59.415 66.667 0.00 0.00 34.23 5.03
31 32 2.125106 CCAGTTACCCCTGAGCGC 60.125 66.667 0.00 0.00 34.23 5.92
32 33 2.125106 CAGTTACCCCTGAGCGCC 60.125 66.667 2.29 0.00 34.23 6.53
33 34 3.771160 AGTTACCCCTGAGCGCCG 61.771 66.667 2.29 0.00 0.00 6.46
34 35 3.766691 GTTACCCCTGAGCGCCGA 61.767 66.667 2.29 0.00 0.00 5.54
35 36 3.766691 TTACCCCTGAGCGCCGAC 61.767 66.667 2.29 0.00 0.00 4.79
41 42 4.680237 CTGAGCGCCGACACCCAA 62.680 66.667 2.29 0.00 0.00 4.12
42 43 4.243008 TGAGCGCCGACACCCAAA 62.243 61.111 2.29 0.00 0.00 3.28
43 44 3.423154 GAGCGCCGACACCCAAAG 61.423 66.667 2.29 0.00 0.00 2.77
56 57 2.348411 CCCAAAGGGCGATGTAGATT 57.652 50.000 0.00 0.00 35.35 2.40
57 58 2.222027 CCCAAAGGGCGATGTAGATTC 58.778 52.381 0.00 0.00 35.35 2.52
58 59 2.158755 CCCAAAGGGCGATGTAGATTCT 60.159 50.000 0.00 0.00 35.35 2.40
59 60 3.134458 CCAAAGGGCGATGTAGATTCTC 58.866 50.000 0.00 0.00 0.00 2.87
60 61 3.134458 CAAAGGGCGATGTAGATTCTCC 58.866 50.000 0.00 0.00 0.00 3.71
61 62 2.088104 AGGGCGATGTAGATTCTCCA 57.912 50.000 0.00 0.00 0.00 3.86
62 63 1.689273 AGGGCGATGTAGATTCTCCAC 59.311 52.381 0.00 0.00 0.00 4.02
63 64 1.270358 GGGCGATGTAGATTCTCCACC 60.270 57.143 0.00 0.00 0.00 4.61
64 65 1.603172 GGCGATGTAGATTCTCCACCG 60.603 57.143 0.00 0.00 0.00 4.94
65 66 1.603172 GCGATGTAGATTCTCCACCGG 60.603 57.143 0.00 0.00 0.00 5.28
66 67 1.000163 CGATGTAGATTCTCCACCGGG 60.000 57.143 6.32 0.00 0.00 5.73
67 68 2.040178 GATGTAGATTCTCCACCGGGT 58.960 52.381 6.32 0.00 34.93 5.28
68 69 1.946984 TGTAGATTCTCCACCGGGTT 58.053 50.000 6.32 0.00 34.93 4.11
69 70 1.829222 TGTAGATTCTCCACCGGGTTC 59.171 52.381 6.32 0.00 34.93 3.62
70 71 1.829222 GTAGATTCTCCACCGGGTTCA 59.171 52.381 6.32 0.00 34.93 3.18
71 72 1.358152 AGATTCTCCACCGGGTTCAA 58.642 50.000 6.32 0.00 34.93 2.69
72 73 1.279271 AGATTCTCCACCGGGTTCAAG 59.721 52.381 6.32 0.00 34.93 3.02
73 74 1.003233 GATTCTCCACCGGGTTCAAGT 59.997 52.381 6.32 0.00 34.93 3.16
74 75 0.841289 TTCTCCACCGGGTTCAAGTT 59.159 50.000 6.32 0.00 34.93 2.66
75 76 0.841289 TCTCCACCGGGTTCAAGTTT 59.159 50.000 6.32 0.00 34.93 2.66
76 77 0.951558 CTCCACCGGGTTCAAGTTTG 59.048 55.000 6.32 0.00 34.93 2.93
77 78 1.104577 TCCACCGGGTTCAAGTTTGC 61.105 55.000 6.32 0.00 34.93 3.68
78 79 1.388065 CCACCGGGTTCAAGTTTGCA 61.388 55.000 6.32 0.00 0.00 4.08
79 80 0.248866 CACCGGGTTCAAGTTTGCAC 60.249 55.000 6.32 0.00 0.00 4.57
80 81 1.008995 CCGGGTTCAAGTTTGCACG 60.009 57.895 0.00 0.00 0.00 5.34
81 82 1.440938 CCGGGTTCAAGTTTGCACGA 61.441 55.000 0.00 0.00 0.00 4.35
82 83 0.041312 CGGGTTCAAGTTTGCACGAG 60.041 55.000 0.00 0.00 0.00 4.18
83 84 0.317854 GGGTTCAAGTTTGCACGAGC 60.318 55.000 0.00 0.00 42.57 5.03
84 85 0.663153 GGTTCAAGTTTGCACGAGCT 59.337 50.000 6.36 0.00 42.74 4.09
85 86 1.871039 GGTTCAAGTTTGCACGAGCTA 59.129 47.619 6.36 0.00 42.74 3.32
86 87 2.289547 GGTTCAAGTTTGCACGAGCTAA 59.710 45.455 6.36 1.48 42.74 3.09
87 88 3.058224 GGTTCAAGTTTGCACGAGCTAAT 60.058 43.478 6.36 0.00 42.74 1.73
88 89 4.537015 GTTCAAGTTTGCACGAGCTAATT 58.463 39.130 6.36 0.00 42.74 1.40
89 90 4.829064 TCAAGTTTGCACGAGCTAATTT 57.171 36.364 6.36 5.21 42.74 1.82
90 91 4.783242 TCAAGTTTGCACGAGCTAATTTC 58.217 39.130 6.36 0.00 42.74 2.17
91 92 4.274705 TCAAGTTTGCACGAGCTAATTTCA 59.725 37.500 6.36 0.00 42.74 2.69
92 93 4.147219 AGTTTGCACGAGCTAATTTCAC 57.853 40.909 6.36 0.00 42.74 3.18
93 94 3.058224 AGTTTGCACGAGCTAATTTCACC 60.058 43.478 6.36 0.00 42.74 4.02
94 95 1.448985 TGCACGAGCTAATTTCACCC 58.551 50.000 6.36 0.00 42.74 4.61
95 96 0.373716 GCACGAGCTAATTTCACCCG 59.626 55.000 0.00 0.00 37.91 5.28
96 97 2.004583 CACGAGCTAATTTCACCCGA 57.995 50.000 0.00 0.00 0.00 5.14
97 98 1.927174 CACGAGCTAATTTCACCCGAG 59.073 52.381 0.00 0.00 0.00 4.63
98 99 1.134788 ACGAGCTAATTTCACCCGAGG 60.135 52.381 0.00 0.00 0.00 4.63
99 100 1.300481 GAGCTAATTTCACCCGAGGC 58.700 55.000 0.00 0.00 0.00 4.70
100 101 0.618458 AGCTAATTTCACCCGAGGCA 59.382 50.000 0.00 0.00 0.00 4.75
101 102 0.733150 GCTAATTTCACCCGAGGCAC 59.267 55.000 0.00 0.00 0.00 5.01
103 104 2.711542 CTAATTTCACCCGAGGCACTT 58.288 47.619 0.00 0.00 41.55 3.16
104 105 2.871096 AATTTCACCCGAGGCACTTA 57.129 45.000 0.00 0.00 41.55 2.24
105 106 3.366052 AATTTCACCCGAGGCACTTAT 57.634 42.857 0.00 0.00 41.55 1.73
106 107 2.871096 TTTCACCCGAGGCACTTATT 57.129 45.000 0.00 0.00 41.55 1.40
107 108 2.396590 TTCACCCGAGGCACTTATTC 57.603 50.000 0.00 0.00 41.55 1.75
108 109 0.539986 TCACCCGAGGCACTTATTCC 59.460 55.000 0.00 0.00 41.55 3.01
109 110 0.463833 CACCCGAGGCACTTATTCCC 60.464 60.000 0.00 0.00 41.55 3.97
110 111 0.620700 ACCCGAGGCACTTATTCCCT 60.621 55.000 0.00 0.00 41.55 4.20
111 112 0.179045 CCCGAGGCACTTATTCCCTG 60.179 60.000 0.00 0.00 41.55 4.45
112 113 0.179045 CCGAGGCACTTATTCCCTGG 60.179 60.000 0.00 0.00 41.55 4.45
113 114 0.179045 CGAGGCACTTATTCCCTGGG 60.179 60.000 6.33 6.33 41.55 4.45
114 115 1.213296 GAGGCACTTATTCCCTGGGA 58.787 55.000 12.53 12.53 41.55 4.37
115 116 1.564348 GAGGCACTTATTCCCTGGGAA 59.436 52.381 29.35 29.35 43.12 3.97
117 118 3.394606 GAGGCACTTATTCCCTGGGAATA 59.605 47.826 34.24 34.24 45.42 1.75
132 133 3.147553 GGAATAGCTCCCCTGAAATCC 57.852 52.381 0.00 0.00 38.44 3.01
133 134 2.443255 GGAATAGCTCCCCTGAAATCCA 59.557 50.000 0.00 0.00 38.44 3.41
134 135 3.117512 GGAATAGCTCCCCTGAAATCCAA 60.118 47.826 0.00 0.00 38.44 3.53
135 136 4.536765 GAATAGCTCCCCTGAAATCCAAA 58.463 43.478 0.00 0.00 0.00 3.28
136 137 4.821532 ATAGCTCCCCTGAAATCCAAAT 57.178 40.909 0.00 0.00 0.00 2.32
137 138 2.743553 AGCTCCCCTGAAATCCAAATG 58.256 47.619 0.00 0.00 0.00 2.32
138 139 2.312741 AGCTCCCCTGAAATCCAAATGA 59.687 45.455 0.00 0.00 0.00 2.57
139 140 3.099141 GCTCCCCTGAAATCCAAATGAA 58.901 45.455 0.00 0.00 0.00 2.57
140 141 3.131755 GCTCCCCTGAAATCCAAATGAAG 59.868 47.826 0.00 0.00 0.00 3.02
141 142 3.099141 TCCCCTGAAATCCAAATGAAGC 58.901 45.455 0.00 0.00 0.00 3.86
142 143 2.169144 CCCCTGAAATCCAAATGAAGCC 59.831 50.000 0.00 0.00 0.00 4.35
149 150 5.246656 TGAAATCCAAATGAAGCCTTGATGT 59.753 36.000 0.00 0.00 0.00 3.06
165 166 1.482593 GATGTCTGAATGTCCCGGTCT 59.517 52.381 0.00 0.00 0.00 3.85
181 182 4.021719 CCCGGTCTTGTTTGAGTAGTTCTA 60.022 45.833 0.00 0.00 0.00 2.10
182 183 5.337330 CCCGGTCTTGTTTGAGTAGTTCTAT 60.337 44.000 0.00 0.00 0.00 1.98
184 185 7.417570 CCCGGTCTTGTTTGAGTAGTTCTATAT 60.418 40.741 0.00 0.00 0.00 0.86
185 186 7.980099 CCGGTCTTGTTTGAGTAGTTCTATATT 59.020 37.037 0.00 0.00 0.00 1.28
227 232 0.378257 AATGATGGACGTGCAATCGC 59.622 50.000 15.51 4.77 39.24 4.58
260 265 8.547967 TGGACATAACTTTGATCTACTTTGTC 57.452 34.615 0.00 0.00 0.00 3.18
284 289 8.908903 GTCAGAGTCTCCTCATCTTCTTTTATA 58.091 37.037 0.00 0.00 40.40 0.98
289 294 8.482128 AGTCTCCTCATCTTCTTTTATAGGTTG 58.518 37.037 0.00 0.00 0.00 3.77
304 309 9.804758 TTTTATAGGTTGGTTTGTGTTACTTTG 57.195 29.630 0.00 0.00 0.00 2.77
328 333 1.948104 ATTATAGCGGCGTGAAAGCA 58.052 45.000 9.37 0.00 39.27 3.91
333 338 1.094785 AGCGGCGTGAAAGCATATTT 58.905 45.000 9.37 0.00 39.27 1.40
358 363 7.780822 TCAAGATTATTAGGAGAGGGGTAGAT 58.219 38.462 0.00 0.00 0.00 1.98
367 372 2.764572 GAGAGGGGTAGATGGTTTTCGA 59.235 50.000 0.00 0.00 0.00 3.71
459 464 0.042731 TGTAGAAGGGAGGTGGAGGG 59.957 60.000 0.00 0.00 0.00 4.30
477 482 4.427312 GAGGGCGTTTTTAAGATACGAGA 58.573 43.478 9.38 0.00 37.47 4.04
496 1395 6.760291 ACGAGAGAGGAGAAAATTTGTACTT 58.240 36.000 0.00 0.00 0.00 2.24
501 1400 6.538263 AGAGGAGAAAATTTGTACTTGCTCT 58.462 36.000 0.00 0.00 0.00 4.09
505 1404 6.319141 AGAAAATTTGTACTTGCTCTGTCC 57.681 37.500 0.00 0.00 0.00 4.02
544 1443 7.805071 CGGAGAAATAAATAAGAATGGATGCAC 59.195 37.037 0.00 0.00 0.00 4.57
604 1503 7.541916 TTGGTAAATACTTTTTAACAGGGGG 57.458 36.000 0.00 0.00 33.66 5.40
616 1518 7.427989 TTTTAACAGGGGGAGTACTACTATG 57.572 40.000 4.77 4.29 0.00 2.23
641 1543 3.075866 GCAATGTCAAGCCAGATAAGC 57.924 47.619 0.00 0.00 0.00 3.09
719 1621 3.982316 TTCTACCCGAGCCTCGCGA 62.982 63.158 9.26 9.26 38.82 5.87
778 1680 2.933287 TCCTGATTGGCCCGTGGT 60.933 61.111 0.00 0.00 35.26 4.16
780 1682 2.350895 CTGATTGGCCCGTGGTCA 59.649 61.111 0.00 0.00 34.47 4.02
901 1805 3.213264 CCGCGCCGGGGTATATAT 58.787 61.111 20.83 0.00 44.15 0.86
940 1844 4.330250 CTCCAGACTCAAACCACATCAAT 58.670 43.478 0.00 0.00 0.00 2.57
941 1845 4.326826 TCCAGACTCAAACCACATCAATC 58.673 43.478 0.00 0.00 0.00 2.67
942 1846 4.074259 CCAGACTCAAACCACATCAATCA 58.926 43.478 0.00 0.00 0.00 2.57
943 1847 4.520111 CCAGACTCAAACCACATCAATCAA 59.480 41.667 0.00 0.00 0.00 2.57
944 1848 5.184479 CCAGACTCAAACCACATCAATCAAT 59.816 40.000 0.00 0.00 0.00 2.57
955 1872 4.647853 CACATCAATCAATCAATCCCACCT 59.352 41.667 0.00 0.00 0.00 4.00
1248 2211 4.536489 CCTTCCTTCCTTCCTTCCTCTTTA 59.464 45.833 0.00 0.00 0.00 1.85
1250 2213 4.499472 TCCTTCCTTCCTTCCTCTTTACA 58.501 43.478 0.00 0.00 0.00 2.41
1251 2214 5.101529 TCCTTCCTTCCTTCCTCTTTACAT 58.898 41.667 0.00 0.00 0.00 2.29
1252 2215 5.189934 TCCTTCCTTCCTTCCTCTTTACATC 59.810 44.000 0.00 0.00 0.00 3.06
1263 2226 3.024547 CTCTTTACATCCTCTCCGGTCA 58.975 50.000 0.00 0.00 0.00 4.02
1266 2229 2.454336 TACATCCTCTCCGGTCATGT 57.546 50.000 0.00 6.54 35.21 3.21
1269 2232 0.689080 ATCCTCTCCGGTCATGTGCT 60.689 55.000 0.00 0.00 0.00 4.40
1538 2523 0.187361 CCACCAAGTCCCCCAAGAAA 59.813 55.000 0.00 0.00 0.00 2.52
1578 2567 0.321671 AGTAGTGCGGTGTGCTGATT 59.678 50.000 0.00 0.00 46.63 2.57
1583 2572 1.154413 GCGGTGTGCTGATTGTTCG 60.154 57.895 0.00 0.00 41.73 3.95
1607 2596 5.420409 AGTTTGGTTAGATGTAGTAGCTGC 58.580 41.667 0.00 0.00 0.00 5.25
1800 2833 3.389329 TGAGACCCTCCATTCATAAGCTC 59.611 47.826 0.00 0.00 0.00 4.09
1804 2837 3.461085 ACCCTCCATTCATAAGCTCACAT 59.539 43.478 0.00 0.00 0.00 3.21
1805 2838 4.660303 ACCCTCCATTCATAAGCTCACATA 59.340 41.667 0.00 0.00 0.00 2.29
1807 2840 5.471456 CCCTCCATTCATAAGCTCACATAAC 59.529 44.000 0.00 0.00 0.00 1.89
1824 2857 4.631813 ACATAACGAGCACAAAATCCTCTC 59.368 41.667 0.00 0.00 0.00 3.20
1827 2860 4.471904 ACGAGCACAAAATCCTCTCATA 57.528 40.909 0.00 0.00 0.00 2.15
1831 2865 6.183360 ACGAGCACAAAATCCTCTCATATTTG 60.183 38.462 0.00 0.00 37.10 2.32
1848 2882 7.791029 TCATATTTGTACAGACCATAGCTGAA 58.209 34.615 0.00 0.00 36.86 3.02
1861 2895 5.109210 CCATAGCTGAAATGTAACTGACGA 58.891 41.667 0.00 0.00 0.00 4.20
1892 2926 0.890542 GCTGTTGCTCACATGGTGGA 60.891 55.000 0.00 0.00 33.76 4.02
1896 2930 1.680735 GTTGCTCACATGGTGGACAAA 59.319 47.619 0.00 0.00 33.34 2.83
1897 2931 2.291209 TGCTCACATGGTGGACAAAT 57.709 45.000 0.00 0.00 33.87 2.32
1898 2932 2.161855 TGCTCACATGGTGGACAAATC 58.838 47.619 0.00 0.00 33.87 2.17
1900 2934 2.821969 GCTCACATGGTGGACAAATCTT 59.178 45.455 0.00 0.00 33.87 2.40
1901 2935 3.119708 GCTCACATGGTGGACAAATCTTC 60.120 47.826 0.00 0.00 33.87 2.87
1902 2936 4.074259 CTCACATGGTGGACAAATCTTCA 58.926 43.478 0.00 0.00 33.87 3.02
1903 2937 4.074259 TCACATGGTGGACAAATCTTCAG 58.926 43.478 0.00 0.00 33.87 3.02
1904 2938 3.192001 CACATGGTGGACAAATCTTCAGG 59.808 47.826 0.00 0.00 0.00 3.86
1909 2943 3.498661 GGTGGACAAATCTTCAGGTTCCT 60.499 47.826 0.00 0.00 0.00 3.36
1915 2949 3.618690 AATCTTCAGGTTCCTCTTCCG 57.381 47.619 0.00 0.00 0.00 4.30
1945 2979 3.814005 TCCTAGAGCCGGAATGTTTAC 57.186 47.619 5.05 0.00 0.00 2.01
1948 2982 2.403252 AGAGCCGGAATGTTTACCAG 57.597 50.000 5.05 0.00 0.00 4.00
1976 3017 2.929531 AGCTACACTCGTCTGTCATG 57.070 50.000 0.00 0.00 0.00 3.07
2000 3041 3.844577 ACAATTCTGCTGAGCACATTC 57.155 42.857 1.40 0.00 33.79 2.67
2002 3043 3.190744 ACAATTCTGCTGAGCACATTCTG 59.809 43.478 1.40 0.00 33.79 3.02
2003 3044 2.845363 TTCTGCTGAGCACATTCTGA 57.155 45.000 1.40 0.00 33.79 3.27
2014 3055 1.315257 ACATTCTGATTGGGCGGCAC 61.315 55.000 12.47 0.00 0.00 5.01
2045 3099 3.033909 GCCCCATTTCTGGAAGCTAAAT 58.966 45.455 0.00 0.00 46.37 1.40
2049 3103 6.183361 GCCCCATTTCTGGAAGCTAAATAAAT 60.183 38.462 0.00 0.00 46.37 1.40
2060 3114 7.335924 TGGAAGCTAAATAAATATATCACCGCC 59.664 37.037 0.00 0.00 0.00 6.13
2067 3121 4.543590 AAATATATCACCGCCTCCTCTG 57.456 45.455 0.00 0.00 0.00 3.35
2070 3124 0.033503 TATCACCGCCTCCTCTGTCA 60.034 55.000 0.00 0.00 0.00 3.58
2071 3125 1.326213 ATCACCGCCTCCTCTGTCAG 61.326 60.000 0.00 0.00 0.00 3.51
2072 3126 1.979155 CACCGCCTCCTCTGTCAGA 60.979 63.158 1.78 1.78 0.00 3.27
2075 3129 1.536073 CCGCCTCCTCTGTCAGACAA 61.536 60.000 4.41 0.00 0.00 3.18
2076 3130 0.389166 CGCCTCCTCTGTCAGACAAC 60.389 60.000 4.41 0.00 0.00 3.32
2077 3131 0.972883 GCCTCCTCTGTCAGACAACT 59.027 55.000 4.41 0.00 0.00 3.16
2078 3132 1.067213 GCCTCCTCTGTCAGACAACTC 60.067 57.143 4.41 0.00 0.00 3.01
2080 3134 2.630098 CCTCCTCTGTCAGACAACTCAA 59.370 50.000 4.41 0.00 0.00 3.02
2081 3135 3.553922 CCTCCTCTGTCAGACAACTCAAC 60.554 52.174 4.41 0.00 0.00 3.18
2082 3136 2.034685 TCCTCTGTCAGACAACTCAACG 59.965 50.000 4.41 0.00 0.00 4.10
2083 3137 2.398498 CTCTGTCAGACAACTCAACGG 58.602 52.381 4.41 0.00 0.00 4.44
2084 3138 0.861837 CTGTCAGACAACTCAACGGC 59.138 55.000 4.41 0.00 0.00 5.68
2085 3139 0.464036 TGTCAGACAACTCAACGGCT 59.536 50.000 0.00 0.00 0.00 5.52
2086 3140 0.861837 GTCAGACAACTCAACGGCTG 59.138 55.000 0.00 0.00 0.00 4.85
2102 3156 3.504021 CTGCTCAAGCTCTCGTTGA 57.496 52.632 3.32 0.00 42.66 3.18
2108 3162 1.412710 TCAAGCTCTCGTTGAACCTGT 59.587 47.619 0.00 0.00 30.89 4.00
2128 3182 0.950555 TGTGCGTCTGCTCCATTGTC 60.951 55.000 0.00 0.00 43.34 3.18
2162 3217 3.703001 AAGGCTTACTCTGCTGCTAAA 57.297 42.857 0.00 0.00 0.00 1.85
2163 3218 2.979240 AGGCTTACTCTGCTGCTAAAC 58.021 47.619 0.00 0.00 0.00 2.01
2164 3219 2.010497 GGCTTACTCTGCTGCTAAACC 58.990 52.381 0.00 0.00 0.00 3.27
2165 3220 2.615493 GGCTTACTCTGCTGCTAAACCA 60.615 50.000 0.00 0.00 0.00 3.67
2166 3221 3.074412 GCTTACTCTGCTGCTAAACCAA 58.926 45.455 0.00 0.00 0.00 3.67
2167 3222 3.126000 GCTTACTCTGCTGCTAAACCAAG 59.874 47.826 0.00 0.00 0.00 3.61
2170 3225 1.728971 CTCTGCTGCTAAACCAAGACG 59.271 52.381 0.00 0.00 0.00 4.18
2172 3227 1.195448 CTGCTGCTAAACCAAGACGTG 59.805 52.381 0.00 0.00 0.00 4.49
2173 3228 1.226746 GCTGCTAAACCAAGACGTGT 58.773 50.000 0.00 0.00 0.00 4.49
2174 3229 1.602377 GCTGCTAAACCAAGACGTGTT 59.398 47.619 0.00 0.00 0.00 3.32
2176 3231 2.215196 TGCTAAACCAAGACGTGTTCC 58.785 47.619 0.00 0.00 0.00 3.62
2177 3232 1.193874 GCTAAACCAAGACGTGTTCCG 59.806 52.381 0.00 0.00 44.03 4.30
2178 3233 2.746269 CTAAACCAAGACGTGTTCCGA 58.254 47.619 0.00 0.00 40.70 4.55
2179 3234 2.249844 AAACCAAGACGTGTTCCGAT 57.750 45.000 0.00 0.00 40.70 4.18
2182 3237 1.343465 ACCAAGACGTGTTCCGATCTT 59.657 47.619 0.00 0.00 40.70 2.40
2183 3238 1.726791 CCAAGACGTGTTCCGATCTTG 59.273 52.381 0.00 14.39 44.76 3.02
2185 3240 2.065993 AGACGTGTTCCGATCTTGTG 57.934 50.000 0.00 0.00 40.70 3.33
2186 3241 1.611977 AGACGTGTTCCGATCTTGTGA 59.388 47.619 0.00 0.00 40.70 3.58
2188 3243 2.993899 GACGTGTTCCGATCTTGTGAAT 59.006 45.455 0.00 0.00 40.70 2.57
2189 3244 2.736721 ACGTGTTCCGATCTTGTGAATG 59.263 45.455 0.00 0.00 40.70 2.67
2190 3245 2.474526 CGTGTTCCGATCTTGTGAATGC 60.475 50.000 0.00 0.00 39.56 3.56
2191 3246 1.731709 TGTTCCGATCTTGTGAATGCG 59.268 47.619 0.00 0.00 0.00 4.73
2192 3247 1.999735 GTTCCGATCTTGTGAATGCGA 59.000 47.619 0.00 0.00 0.00 5.10
2193 3248 1.640428 TCCGATCTTGTGAATGCGAC 58.360 50.000 0.00 0.00 0.00 5.19
2194 3249 0.298707 CCGATCTTGTGAATGCGACG 59.701 55.000 0.00 0.00 0.00 5.12
2255 3379 1.303309 GGATGGTCTGCTGGATTTCG 58.697 55.000 0.00 0.00 0.00 3.46
2256 3380 1.407437 GGATGGTCTGCTGGATTTCGT 60.407 52.381 0.00 0.00 0.00 3.85
2260 3384 3.071479 TGGTCTGCTGGATTTCGTTTAC 58.929 45.455 0.00 0.00 0.00 2.01
2262 3386 3.125316 GGTCTGCTGGATTTCGTTTACTG 59.875 47.826 0.00 0.00 0.00 2.74
2268 3392 7.011389 TCTGCTGGATTTCGTTTACTGATAATG 59.989 37.037 0.00 0.00 0.00 1.90
2269 3393 5.909610 GCTGGATTTCGTTTACTGATAATGC 59.090 40.000 0.00 0.00 0.00 3.56
2270 3394 6.043327 TGGATTTCGTTTACTGATAATGCG 57.957 37.500 0.00 0.00 0.00 4.73
2271 3395 4.904154 GGATTTCGTTTACTGATAATGCGC 59.096 41.667 0.00 0.00 0.00 6.09
2272 3396 3.936902 TTCGTTTACTGATAATGCGCC 57.063 42.857 4.18 0.00 0.00 6.53
2273 3397 2.894902 TCGTTTACTGATAATGCGCCA 58.105 42.857 4.18 0.00 0.00 5.69
2274 3398 3.263261 TCGTTTACTGATAATGCGCCAA 58.737 40.909 4.18 0.00 0.00 4.52
2275 3399 3.308595 TCGTTTACTGATAATGCGCCAAG 59.691 43.478 4.18 0.00 0.00 3.61
2286 3410 4.670606 CGCCAAGCAAATCGTAGC 57.329 55.556 0.00 0.00 0.00 3.58
2287 3411 1.296867 CGCCAAGCAAATCGTAGCG 60.297 57.895 0.00 0.00 35.48 4.26
2288 3412 1.692148 CGCCAAGCAAATCGTAGCGA 61.692 55.000 0.00 0.00 44.51 4.93
2289 3413 0.446222 GCCAAGCAAATCGTAGCGAA 59.554 50.000 0.00 0.00 39.99 4.70
2290 3414 1.064060 GCCAAGCAAATCGTAGCGAAT 59.936 47.619 0.00 0.00 39.99 3.34
2291 3415 2.851008 GCCAAGCAAATCGTAGCGAATC 60.851 50.000 0.00 0.00 39.99 2.52
2292 3416 2.351418 CCAAGCAAATCGTAGCGAATCA 59.649 45.455 0.00 0.00 39.99 2.57
2293 3417 3.181511 CCAAGCAAATCGTAGCGAATCAA 60.182 43.478 0.00 0.00 39.99 2.57
2294 3418 3.933155 AGCAAATCGTAGCGAATCAAG 57.067 42.857 0.00 0.00 39.99 3.02
2295 3419 3.521560 AGCAAATCGTAGCGAATCAAGA 58.478 40.909 0.00 0.00 39.99 3.02
2296 3420 3.553511 AGCAAATCGTAGCGAATCAAGAG 59.446 43.478 0.00 0.00 39.99 2.85
2297 3421 3.307242 GCAAATCGTAGCGAATCAAGAGT 59.693 43.478 0.00 0.00 39.99 3.24
2298 3422 4.503007 GCAAATCGTAGCGAATCAAGAGTA 59.497 41.667 0.00 0.00 39.99 2.59
2299 3423 5.005394 GCAAATCGTAGCGAATCAAGAGTAA 59.995 40.000 0.00 0.00 39.99 2.24
2300 3424 6.292381 GCAAATCGTAGCGAATCAAGAGTAAT 60.292 38.462 0.00 0.00 39.99 1.89
2301 3425 7.096189 GCAAATCGTAGCGAATCAAGAGTAATA 60.096 37.037 0.00 0.00 39.99 0.98
2302 3426 8.752254 CAAATCGTAGCGAATCAAGAGTAATAA 58.248 33.333 0.00 0.00 39.99 1.40
2303 3427 9.477484 AAATCGTAGCGAATCAAGAGTAATAAT 57.523 29.630 0.00 0.00 39.99 1.28
2305 3429 8.945758 TCGTAGCGAATCAAGAGTAATAATAC 57.054 34.615 0.00 0.00 31.06 1.89
2306 3430 8.781196 TCGTAGCGAATCAAGAGTAATAATACT 58.219 33.333 0.00 0.00 37.78 2.12
2307 3431 8.841822 CGTAGCGAATCAAGAGTAATAATACTG 58.158 37.037 0.00 0.00 42.47 2.74
2308 3432 7.644986 AGCGAATCAAGAGTAATAATACTGC 57.355 36.000 0.00 0.00 42.47 4.40
2309 3433 7.437748 AGCGAATCAAGAGTAATAATACTGCT 58.562 34.615 0.00 0.00 42.47 4.24
2310 3434 8.577296 AGCGAATCAAGAGTAATAATACTGCTA 58.423 33.333 0.00 0.00 42.47 3.49
2311 3435 9.193133 GCGAATCAAGAGTAATAATACTGCTAA 57.807 33.333 0.00 0.00 42.47 3.09
2316 3440 9.817809 TCAAGAGTAATAATACTGCTAAACCTG 57.182 33.333 0.00 0.00 42.47 4.00
2317 3441 9.601217 CAAGAGTAATAATACTGCTAAACCTGT 57.399 33.333 0.00 0.00 42.47 4.00
2321 3445 9.392259 AGTAATAATACTGCTAAACCTGTTTCC 57.608 33.333 0.00 0.00 40.88 3.13
2322 3446 7.640597 AATAATACTGCTAAACCTGTTTCCC 57.359 36.000 0.00 0.00 34.23 3.97
2323 3447 4.929146 ATACTGCTAAACCTGTTTCCCT 57.071 40.909 0.00 0.00 34.23 4.20
2324 3448 3.595190 ACTGCTAAACCTGTTTCCCTT 57.405 42.857 0.00 0.00 34.23 3.95
2325 3449 3.910989 ACTGCTAAACCTGTTTCCCTTT 58.089 40.909 0.00 0.00 34.23 3.11
2326 3450 4.286707 ACTGCTAAACCTGTTTCCCTTTT 58.713 39.130 0.00 0.00 34.23 2.27
2327 3451 4.714802 ACTGCTAAACCTGTTTCCCTTTTT 59.285 37.500 0.00 0.00 34.23 1.94
2347 3471 6.569179 TTTTTAAAGAGGGAACGAATCTGG 57.431 37.500 0.00 0.00 0.00 3.86
2348 3472 5.492855 TTTAAAGAGGGAACGAATCTGGA 57.507 39.130 0.00 0.00 0.00 3.86
2349 3473 3.618690 AAAGAGGGAACGAATCTGGAG 57.381 47.619 0.00 0.00 0.00 3.86
2350 3474 2.534042 AGAGGGAACGAATCTGGAGA 57.466 50.000 0.00 0.00 0.00 3.71
2351 3475 2.821437 AGAGGGAACGAATCTGGAGAA 58.179 47.619 0.00 0.00 0.00 2.87
2352 3476 3.379452 AGAGGGAACGAATCTGGAGAAT 58.621 45.455 0.00 0.00 0.00 2.40
2353 3477 4.547671 AGAGGGAACGAATCTGGAGAATA 58.452 43.478 0.00 0.00 0.00 1.75
2354 3478 5.151454 AGAGGGAACGAATCTGGAGAATAT 58.849 41.667 0.00 0.00 0.00 1.28
2355 3479 6.315714 AGAGGGAACGAATCTGGAGAATATA 58.684 40.000 0.00 0.00 0.00 0.86
2356 3480 6.957020 AGAGGGAACGAATCTGGAGAATATAT 59.043 38.462 0.00 0.00 0.00 0.86
2357 3481 8.116669 AGAGGGAACGAATCTGGAGAATATATA 58.883 37.037 0.00 0.00 0.00 0.86
2358 3482 8.666129 AGGGAACGAATCTGGAGAATATATAA 57.334 34.615 0.00 0.00 0.00 0.98
2359 3483 9.101325 AGGGAACGAATCTGGAGAATATATAAA 57.899 33.333 0.00 0.00 0.00 1.40
2360 3484 9.152595 GGGAACGAATCTGGAGAATATATAAAC 57.847 37.037 0.00 0.00 0.00 2.01
2361 3485 9.706691 GGAACGAATCTGGAGAATATATAAACA 57.293 33.333 0.00 0.00 0.00 2.83
2369 3493 9.346005 TCTGGAGAATATATAAACAGTACGACA 57.654 33.333 0.00 0.00 0.00 4.35
2370 3494 9.961265 CTGGAGAATATATAAACAGTACGACAA 57.039 33.333 0.00 0.00 0.00 3.18
2371 3495 9.740239 TGGAGAATATATAAACAGTACGACAAC 57.260 33.333 0.00 0.00 0.00 3.32
2372 3496 8.899776 GGAGAATATATAAACAGTACGACAACG 58.100 37.037 0.00 0.00 45.75 4.10
2373 3497 8.278482 AGAATATATAAACAGTACGACAACGC 57.722 34.615 0.00 0.00 43.96 4.84
2374 3498 6.664978 ATATATAAACAGTACGACAACGCG 57.335 37.500 3.53 3.53 43.96 6.01
2375 3499 2.397777 TAAACAGTACGACAACGCGA 57.602 45.000 15.93 0.00 43.96 5.87
2376 3500 1.126079 AAACAGTACGACAACGCGAG 58.874 50.000 15.93 7.57 43.96 5.03
2389 3513 1.992170 ACGCGAGTGTTAGACAATCC 58.008 50.000 15.93 0.00 46.97 3.01
2390 3514 1.271379 ACGCGAGTGTTAGACAATCCA 59.729 47.619 15.93 0.00 46.97 3.41
2391 3515 2.288579 ACGCGAGTGTTAGACAATCCAA 60.289 45.455 15.93 0.00 46.97 3.53
2392 3516 2.092211 CGCGAGTGTTAGACAATCCAAC 59.908 50.000 0.00 0.00 39.79 3.77
2393 3517 2.092211 GCGAGTGTTAGACAATCCAACG 59.908 50.000 3.33 0.00 39.79 4.10
2394 3518 3.314553 CGAGTGTTAGACAATCCAACGT 58.685 45.455 3.33 0.00 39.79 3.99
2395 3519 3.121279 CGAGTGTTAGACAATCCAACGTG 59.879 47.826 3.33 0.00 39.79 4.49
2396 3520 4.304110 GAGTGTTAGACAATCCAACGTGA 58.696 43.478 0.00 0.00 37.24 4.35
2397 3521 4.307432 AGTGTTAGACAATCCAACGTGAG 58.693 43.478 0.00 0.00 0.00 3.51
2398 3522 4.038763 AGTGTTAGACAATCCAACGTGAGA 59.961 41.667 0.00 0.00 0.00 3.27
2399 3523 4.929808 GTGTTAGACAATCCAACGTGAGAT 59.070 41.667 0.00 0.00 0.00 2.75
2400 3524 6.071560 AGTGTTAGACAATCCAACGTGAGATA 60.072 38.462 0.00 0.00 0.00 1.98
2401 3525 6.588756 GTGTTAGACAATCCAACGTGAGATAA 59.411 38.462 0.00 0.00 0.00 1.75
2402 3526 6.811665 TGTTAGACAATCCAACGTGAGATAAG 59.188 38.462 0.00 0.00 0.00 1.73
2403 3527 4.184629 AGACAATCCAACGTGAGATAAGC 58.815 43.478 0.00 0.00 0.00 3.09
2404 3528 3.932710 GACAATCCAACGTGAGATAAGCA 59.067 43.478 0.00 0.00 0.00 3.91
2405 3529 3.684788 ACAATCCAACGTGAGATAAGCAC 59.315 43.478 0.00 0.00 0.00 4.40
2406 3530 3.610040 ATCCAACGTGAGATAAGCACA 57.390 42.857 0.00 0.00 36.06 4.57
2407 3531 2.683968 TCCAACGTGAGATAAGCACAC 58.316 47.619 0.00 0.00 36.06 3.82
2408 3532 2.299013 TCCAACGTGAGATAAGCACACT 59.701 45.455 0.00 0.00 36.15 3.55
2409 3533 3.067106 CCAACGTGAGATAAGCACACTT 58.933 45.455 0.00 0.00 36.15 3.16
2410 3534 3.498397 CCAACGTGAGATAAGCACACTTT 59.502 43.478 0.00 0.00 36.15 2.66
2411 3535 4.457810 CAACGTGAGATAAGCACACTTTG 58.542 43.478 0.00 0.00 39.52 2.77
2412 3536 3.990092 ACGTGAGATAAGCACACTTTGA 58.010 40.909 0.00 0.00 36.15 2.69
2413 3537 3.990469 ACGTGAGATAAGCACACTTTGAG 59.010 43.478 0.00 0.00 36.15 3.02
2414 3538 3.990469 CGTGAGATAAGCACACTTTGAGT 59.010 43.478 0.00 0.00 36.15 3.41
2415 3539 4.449068 CGTGAGATAAGCACACTTTGAGTT 59.551 41.667 0.00 0.00 36.15 3.01
2416 3540 5.388890 CGTGAGATAAGCACACTTTGAGTTC 60.389 44.000 0.00 0.00 36.15 3.01
2417 3541 4.686091 TGAGATAAGCACACTTTGAGTTCG 59.314 41.667 0.00 0.00 37.33 3.95
2418 3542 3.997021 AGATAAGCACACTTTGAGTTCGG 59.003 43.478 0.00 0.00 37.33 4.30
2419 3543 0.663153 AAGCACACTTTGAGTTCGGC 59.337 50.000 0.00 0.00 29.41 5.54
2420 3544 0.179045 AGCACACTTTGAGTTCGGCT 60.179 50.000 0.00 0.00 0.00 5.52
2421 3545 0.663153 GCACACTTTGAGTTCGGCTT 59.337 50.000 0.00 0.00 0.00 4.35
2422 3546 1.871039 GCACACTTTGAGTTCGGCTTA 59.129 47.619 0.00 0.00 0.00 3.09
2423 3547 2.289547 GCACACTTTGAGTTCGGCTTAA 59.710 45.455 0.00 0.00 0.00 1.85
2424 3548 3.058224 GCACACTTTGAGTTCGGCTTAAT 60.058 43.478 0.00 0.00 0.00 1.40
2425 3549 4.153475 GCACACTTTGAGTTCGGCTTAATA 59.847 41.667 0.00 0.00 0.00 0.98
2426 3550 5.163754 GCACACTTTGAGTTCGGCTTAATAT 60.164 40.000 0.00 0.00 0.00 1.28
2427 3551 6.478588 CACACTTTGAGTTCGGCTTAATATC 58.521 40.000 0.00 0.00 0.00 1.63
2428 3552 5.585047 ACACTTTGAGTTCGGCTTAATATCC 59.415 40.000 0.00 0.00 0.00 2.59
2429 3553 4.809426 ACTTTGAGTTCGGCTTAATATCCG 59.191 41.667 5.02 5.02 46.52 4.18
2439 3563 4.999751 GCTTAATATCCGAGCCAAGAAG 57.000 45.455 0.00 0.00 0.00 2.85
2440 3564 4.632153 GCTTAATATCCGAGCCAAGAAGA 58.368 43.478 0.00 0.00 0.00 2.87
2441 3565 4.449405 GCTTAATATCCGAGCCAAGAAGAC 59.551 45.833 0.00 0.00 0.00 3.01
2442 3566 5.601662 CTTAATATCCGAGCCAAGAAGACA 58.398 41.667 0.00 0.00 0.00 3.41
2443 3567 2.961526 TATCCGAGCCAAGAAGACAC 57.038 50.000 0.00 0.00 0.00 3.67
2444 3568 0.976641 ATCCGAGCCAAGAAGACACA 59.023 50.000 0.00 0.00 0.00 3.72
2445 3569 0.033504 TCCGAGCCAAGAAGACACAC 59.966 55.000 0.00 0.00 0.00 3.82
2446 3570 1.284982 CCGAGCCAAGAAGACACACG 61.285 60.000 0.00 0.00 0.00 4.49
2447 3571 0.318699 CGAGCCAAGAAGACACACGA 60.319 55.000 0.00 0.00 0.00 4.35
2448 3572 1.140816 GAGCCAAGAAGACACACGAC 58.859 55.000 0.00 0.00 0.00 4.34
2449 3573 0.464036 AGCCAAGAAGACACACGACA 59.536 50.000 0.00 0.00 0.00 4.35
2450 3574 1.134521 AGCCAAGAAGACACACGACAA 60.135 47.619 0.00 0.00 0.00 3.18
2451 3575 1.003866 GCCAAGAAGACACACGACAAC 60.004 52.381 0.00 0.00 0.00 3.32
2452 3576 2.276201 CCAAGAAGACACACGACAACA 58.724 47.619 0.00 0.00 0.00 3.33
2453 3577 2.285220 CCAAGAAGACACACGACAACAG 59.715 50.000 0.00 0.00 0.00 3.16
2454 3578 3.186909 CAAGAAGACACACGACAACAGA 58.813 45.455 0.00 0.00 0.00 3.41
2455 3579 3.520290 AGAAGACACACGACAACAGAA 57.480 42.857 0.00 0.00 0.00 3.02
2456 3580 3.857052 AGAAGACACACGACAACAGAAA 58.143 40.909 0.00 0.00 0.00 2.52
2457 3581 3.865745 AGAAGACACACGACAACAGAAAG 59.134 43.478 0.00 0.00 0.00 2.62
2458 3582 3.520290 AGACACACGACAACAGAAAGA 57.480 42.857 0.00 0.00 0.00 2.52
2459 3583 3.857052 AGACACACGACAACAGAAAGAA 58.143 40.909 0.00 0.00 0.00 2.52
2460 3584 4.442706 AGACACACGACAACAGAAAGAAT 58.557 39.130 0.00 0.00 0.00 2.40
2461 3585 4.271049 AGACACACGACAACAGAAAGAATG 59.729 41.667 0.00 0.00 0.00 2.67
2462 3586 3.312421 ACACACGACAACAGAAAGAATGG 59.688 43.478 0.00 0.00 0.00 3.16
2463 3587 3.559655 CACACGACAACAGAAAGAATGGA 59.440 43.478 0.00 0.00 0.00 3.41
2464 3588 3.809832 ACACGACAACAGAAAGAATGGAG 59.190 43.478 0.00 0.00 0.00 3.86
2465 3589 4.058124 CACGACAACAGAAAGAATGGAGA 58.942 43.478 0.00 0.00 0.00 3.71
2466 3590 4.511454 CACGACAACAGAAAGAATGGAGAA 59.489 41.667 0.00 0.00 0.00 2.87
2467 3591 4.511826 ACGACAACAGAAAGAATGGAGAAC 59.488 41.667 0.00 0.00 0.00 3.01
2468 3592 4.511454 CGACAACAGAAAGAATGGAGAACA 59.489 41.667 0.00 0.00 0.00 3.18
2469 3593 5.180117 CGACAACAGAAAGAATGGAGAACAT 59.820 40.000 0.00 0.00 43.07 2.71
2470 3594 6.323203 ACAACAGAAAGAATGGAGAACATG 57.677 37.500 0.00 0.00 40.44 3.21
2471 3595 5.242393 ACAACAGAAAGAATGGAGAACATGG 59.758 40.000 0.00 0.00 40.44 3.66
2472 3596 4.990526 ACAGAAAGAATGGAGAACATGGT 58.009 39.130 0.00 0.00 40.44 3.55
2473 3597 4.763793 ACAGAAAGAATGGAGAACATGGTG 59.236 41.667 0.00 0.00 40.44 4.17
2474 3598 4.157289 CAGAAAGAATGGAGAACATGGTGG 59.843 45.833 0.00 0.00 40.44 4.61
2475 3599 2.814805 AGAATGGAGAACATGGTGGG 57.185 50.000 0.00 0.00 40.44 4.61
2476 3600 2.278245 AGAATGGAGAACATGGTGGGA 58.722 47.619 0.00 0.00 40.44 4.37
2477 3601 2.649312 AGAATGGAGAACATGGTGGGAA 59.351 45.455 0.00 0.00 40.44 3.97
2478 3602 3.075882 AGAATGGAGAACATGGTGGGAAA 59.924 43.478 0.00 0.00 40.44 3.13
2479 3603 3.763557 ATGGAGAACATGGTGGGAAAT 57.236 42.857 0.00 0.00 38.70 2.17
2480 3604 2.806434 TGGAGAACATGGTGGGAAATG 58.194 47.619 0.00 0.00 0.00 2.32
2481 3605 1.478105 GGAGAACATGGTGGGAAATGC 59.522 52.381 0.00 0.00 0.00 3.56
2482 3606 2.170166 GAGAACATGGTGGGAAATGCA 58.830 47.619 0.00 0.00 0.00 3.96
2483 3607 2.762327 GAGAACATGGTGGGAAATGCAT 59.238 45.455 0.00 0.00 0.00 3.96
2484 3608 3.175594 AGAACATGGTGGGAAATGCATT 58.824 40.909 5.99 5.99 0.00 3.56
2485 3609 3.055675 AGAACATGGTGGGAAATGCATTG 60.056 43.478 13.82 0.00 0.00 2.82
2486 3610 1.555992 ACATGGTGGGAAATGCATTGG 59.444 47.619 13.82 0.00 0.00 3.16
2487 3611 1.832366 CATGGTGGGAAATGCATTGGA 59.168 47.619 13.82 0.00 0.00 3.53
2488 3612 1.559368 TGGTGGGAAATGCATTGGAG 58.441 50.000 13.82 0.00 0.00 3.86
2489 3613 0.176449 GGTGGGAAATGCATTGGAGC 59.824 55.000 13.82 3.41 0.00 4.70
2496 3620 4.738998 TGCATTGGAGCACCCGGG 62.739 66.667 22.25 22.25 40.11 5.73
2498 3622 4.738998 CATTGGAGCACCCGGGCA 62.739 66.667 24.08 7.11 37.93 5.36
2499 3623 4.740822 ATTGGAGCACCCGGGCAC 62.741 66.667 24.08 13.74 37.93 5.01
2530 3654 8.934023 CCCCCTATATGAAAATAGCACTAAAA 57.066 34.615 0.00 0.00 0.00 1.52
2531 3655 9.362151 CCCCCTATATGAAAATAGCACTAAAAA 57.638 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.168272 AACTGGGGATTGGGGAAGGC 62.168 60.000 0.00 0.00 0.00 4.35
3 4 1.004436 GGTAACTGGGGATTGGGGAA 58.996 55.000 0.00 0.00 0.00 3.97
7 8 0.258774 CAGGGGTAACTGGGGATTGG 59.741 60.000 0.00 0.00 34.84 3.16
8 9 1.212935 CTCAGGGGTAACTGGGGATTG 59.787 57.143 0.00 0.00 38.98 2.67
10 11 0.988678 GCTCAGGGGTAACTGGGGAT 60.989 60.000 0.00 0.00 39.40 3.85
11 12 1.615424 GCTCAGGGGTAACTGGGGA 60.615 63.158 0.00 0.00 39.40 4.81
12 13 2.998949 GCTCAGGGGTAACTGGGG 59.001 66.667 0.00 0.00 39.40 4.96
13 14 2.584608 CGCTCAGGGGTAACTGGG 59.415 66.667 0.00 0.00 41.97 4.45
14 15 2.125106 GCGCTCAGGGGTAACTGG 60.125 66.667 0.00 0.00 38.98 4.00
15 16 2.125106 GGCGCTCAGGGGTAACTG 60.125 66.667 7.64 0.00 39.84 3.16
16 17 3.771160 CGGCGCTCAGGGGTAACT 61.771 66.667 7.64 0.00 0.00 2.24
17 18 3.766691 TCGGCGCTCAGGGGTAAC 61.767 66.667 7.64 0.00 0.00 2.50
18 19 3.766691 GTCGGCGCTCAGGGGTAA 61.767 66.667 7.64 0.00 0.00 2.85
24 25 4.680237 TTGGGTGTCGGCGCTCAG 62.680 66.667 7.64 0.00 36.88 3.35
25 26 4.243008 TTTGGGTGTCGGCGCTCA 62.243 61.111 7.64 0.00 33.10 4.26
26 27 3.423154 CTTTGGGTGTCGGCGCTC 61.423 66.667 7.64 0.00 0.00 5.03
36 37 1.213296 ATCTACATCGCCCTTTGGGT 58.787 50.000 4.42 0.00 46.51 4.51
38 39 3.134458 GAGAATCTACATCGCCCTTTGG 58.866 50.000 0.00 0.00 0.00 3.28
39 40 3.134458 GGAGAATCTACATCGCCCTTTG 58.866 50.000 0.00 0.00 31.32 2.77
40 41 2.771943 TGGAGAATCTACATCGCCCTTT 59.228 45.455 0.00 0.00 36.08 3.11
41 42 2.103263 GTGGAGAATCTACATCGCCCTT 59.897 50.000 0.00 0.00 46.89 3.95
42 43 1.689273 GTGGAGAATCTACATCGCCCT 59.311 52.381 0.00 0.00 46.89 5.19
43 44 2.156343 GTGGAGAATCTACATCGCCC 57.844 55.000 0.00 0.00 46.89 6.13
50 51 1.829222 TGAACCCGGTGGAGAATCTAC 59.171 52.381 0.00 0.00 46.97 2.59
51 52 2.241281 TGAACCCGGTGGAGAATCTA 57.759 50.000 0.00 0.00 33.73 1.98
52 53 1.279271 CTTGAACCCGGTGGAGAATCT 59.721 52.381 0.00 0.00 33.73 2.40
53 54 1.003233 ACTTGAACCCGGTGGAGAATC 59.997 52.381 0.00 0.00 34.81 2.52
54 55 1.064825 ACTTGAACCCGGTGGAGAAT 58.935 50.000 0.00 0.00 34.81 2.40
55 56 0.841289 AACTTGAACCCGGTGGAGAA 59.159 50.000 0.00 0.00 34.81 2.87
56 57 0.841289 AAACTTGAACCCGGTGGAGA 59.159 50.000 0.00 0.00 34.81 3.71
57 58 0.951558 CAAACTTGAACCCGGTGGAG 59.048 55.000 0.00 0.00 34.81 3.86
58 59 1.104577 GCAAACTTGAACCCGGTGGA 61.105 55.000 0.00 0.00 34.81 4.02
59 60 1.362355 GCAAACTTGAACCCGGTGG 59.638 57.895 0.00 0.00 37.80 4.61
60 61 0.248866 GTGCAAACTTGAACCCGGTG 60.249 55.000 0.00 0.00 30.10 4.94
61 62 1.720694 CGTGCAAACTTGAACCCGGT 61.721 55.000 0.00 0.00 32.90 5.28
62 63 1.008995 CGTGCAAACTTGAACCCGG 60.009 57.895 0.00 0.00 32.90 5.73
63 64 0.041312 CTCGTGCAAACTTGAACCCG 60.041 55.000 0.00 0.00 32.90 5.28
64 65 0.317854 GCTCGTGCAAACTTGAACCC 60.318 55.000 4.26 0.00 39.41 4.11
65 66 0.663153 AGCTCGTGCAAACTTGAACC 59.337 50.000 12.58 0.00 42.74 3.62
66 67 3.602390 TTAGCTCGTGCAAACTTGAAC 57.398 42.857 12.58 0.00 42.74 3.18
67 68 4.829064 AATTAGCTCGTGCAAACTTGAA 57.171 36.364 12.58 0.00 42.74 2.69
68 69 4.274705 TGAAATTAGCTCGTGCAAACTTGA 59.725 37.500 12.58 0.00 42.74 3.02
69 70 4.379793 GTGAAATTAGCTCGTGCAAACTTG 59.620 41.667 12.58 0.00 42.74 3.16
70 71 4.537015 GTGAAATTAGCTCGTGCAAACTT 58.463 39.130 12.58 0.00 42.74 2.66
71 72 3.058224 GGTGAAATTAGCTCGTGCAAACT 60.058 43.478 12.58 0.00 42.74 2.66
72 73 3.234386 GGTGAAATTAGCTCGTGCAAAC 58.766 45.455 12.58 0.00 42.74 2.93
73 74 2.227865 GGGTGAAATTAGCTCGTGCAAA 59.772 45.455 12.58 0.00 42.74 3.68
74 75 1.810151 GGGTGAAATTAGCTCGTGCAA 59.190 47.619 12.58 4.68 42.74 4.08
75 76 1.448985 GGGTGAAATTAGCTCGTGCA 58.551 50.000 12.58 0.00 42.74 4.57
76 77 0.373716 CGGGTGAAATTAGCTCGTGC 59.626 55.000 0.07 0.07 40.05 5.34
77 78 1.927174 CTCGGGTGAAATTAGCTCGTG 59.073 52.381 0.00 0.00 0.00 4.35
78 79 1.134788 CCTCGGGTGAAATTAGCTCGT 60.135 52.381 0.00 0.00 0.00 4.18
79 80 1.571919 CCTCGGGTGAAATTAGCTCG 58.428 55.000 0.00 0.00 0.00 5.03
80 81 1.300481 GCCTCGGGTGAAATTAGCTC 58.700 55.000 0.00 0.00 0.00 4.09
81 82 0.618458 TGCCTCGGGTGAAATTAGCT 59.382 50.000 0.00 0.00 0.00 3.32
82 83 0.733150 GTGCCTCGGGTGAAATTAGC 59.267 55.000 0.00 0.00 0.00 3.09
83 84 2.403252 AGTGCCTCGGGTGAAATTAG 57.597 50.000 0.00 0.00 0.00 1.73
84 85 2.871096 AAGTGCCTCGGGTGAAATTA 57.129 45.000 0.00 0.00 0.00 1.40
85 86 2.871096 TAAGTGCCTCGGGTGAAATT 57.129 45.000 0.00 0.00 0.00 1.82
86 87 3.279434 GAATAAGTGCCTCGGGTGAAAT 58.721 45.455 0.00 0.00 0.00 2.17
87 88 2.617021 GGAATAAGTGCCTCGGGTGAAA 60.617 50.000 0.00 0.00 0.00 2.69
88 89 1.065709 GGAATAAGTGCCTCGGGTGAA 60.066 52.381 0.00 0.00 0.00 3.18
89 90 0.539986 GGAATAAGTGCCTCGGGTGA 59.460 55.000 0.00 0.00 0.00 4.02
90 91 0.463833 GGGAATAAGTGCCTCGGGTG 60.464 60.000 0.00 0.00 34.08 4.61
91 92 1.912971 GGGAATAAGTGCCTCGGGT 59.087 57.895 0.00 0.00 34.08 5.28
92 93 4.878878 GGGAATAAGTGCCTCGGG 57.121 61.111 0.00 0.00 34.08 5.14
112 113 2.443255 TGGATTTCAGGGGAGCTATTCC 59.557 50.000 0.00 0.00 46.00 3.01
113 114 3.864789 TGGATTTCAGGGGAGCTATTC 57.135 47.619 0.00 0.00 0.00 1.75
114 115 4.608170 TTTGGATTTCAGGGGAGCTATT 57.392 40.909 0.00 0.00 0.00 1.73
115 116 4.168675 TCATTTGGATTTCAGGGGAGCTAT 59.831 41.667 0.00 0.00 0.00 2.97
116 117 3.527253 TCATTTGGATTTCAGGGGAGCTA 59.473 43.478 0.00 0.00 0.00 3.32
117 118 2.312741 TCATTTGGATTTCAGGGGAGCT 59.687 45.455 0.00 0.00 0.00 4.09
118 119 2.738743 TCATTTGGATTTCAGGGGAGC 58.261 47.619 0.00 0.00 0.00 4.70
119 120 3.131755 GCTTCATTTGGATTTCAGGGGAG 59.868 47.826 0.00 0.00 0.00 4.30
120 121 3.099141 GCTTCATTTGGATTTCAGGGGA 58.901 45.455 0.00 0.00 0.00 4.81
121 122 2.169144 GGCTTCATTTGGATTTCAGGGG 59.831 50.000 0.00 0.00 0.00 4.79
122 123 3.102204 AGGCTTCATTTGGATTTCAGGG 58.898 45.455 0.00 0.00 0.00 4.45
123 124 4.221262 TCAAGGCTTCATTTGGATTTCAGG 59.779 41.667 0.00 0.00 0.00 3.86
124 125 5.395682 TCAAGGCTTCATTTGGATTTCAG 57.604 39.130 0.00 0.00 0.00 3.02
125 126 5.246656 ACATCAAGGCTTCATTTGGATTTCA 59.753 36.000 0.00 0.00 0.00 2.69
126 127 5.727434 ACATCAAGGCTTCATTTGGATTTC 58.273 37.500 0.00 0.00 0.00 2.17
127 128 5.482878 AGACATCAAGGCTTCATTTGGATTT 59.517 36.000 0.00 0.00 20.59 2.17
128 129 5.021458 AGACATCAAGGCTTCATTTGGATT 58.979 37.500 0.00 0.00 20.59 3.01
129 130 4.401519 CAGACATCAAGGCTTCATTTGGAT 59.598 41.667 0.00 0.00 27.44 3.41
130 131 3.760151 CAGACATCAAGGCTTCATTTGGA 59.240 43.478 0.00 0.00 27.44 3.53
131 132 3.760151 TCAGACATCAAGGCTTCATTTGG 59.240 43.478 0.00 0.00 27.44 3.28
132 133 5.381174 TTCAGACATCAAGGCTTCATTTG 57.619 39.130 0.00 0.00 27.44 2.32
133 134 5.479375 ACATTCAGACATCAAGGCTTCATTT 59.521 36.000 0.00 0.00 27.44 2.32
134 135 5.014858 ACATTCAGACATCAAGGCTTCATT 58.985 37.500 0.00 0.00 27.44 2.57
135 136 4.597004 ACATTCAGACATCAAGGCTTCAT 58.403 39.130 0.00 0.00 27.44 2.57
136 137 4.005650 GACATTCAGACATCAAGGCTTCA 58.994 43.478 0.00 0.00 27.44 3.02
137 138 3.376546 GGACATTCAGACATCAAGGCTTC 59.623 47.826 0.00 0.00 27.44 3.86
138 139 3.350833 GGACATTCAGACATCAAGGCTT 58.649 45.455 0.00 0.00 27.44 4.35
139 140 2.356535 GGGACATTCAGACATCAAGGCT 60.357 50.000 0.00 0.00 33.98 4.58
140 141 2.019984 GGGACATTCAGACATCAAGGC 58.980 52.381 0.00 0.00 0.00 4.35
141 142 2.283298 CGGGACATTCAGACATCAAGG 58.717 52.381 0.00 0.00 0.00 3.61
142 143 2.283298 CCGGGACATTCAGACATCAAG 58.717 52.381 0.00 0.00 0.00 3.02
149 150 1.348064 ACAAGACCGGGACATTCAGA 58.652 50.000 6.32 0.00 0.00 3.27
204 205 2.183478 TTGCACGTCCATCATTCTGT 57.817 45.000 0.00 0.00 0.00 3.41
205 206 2.286008 CGATTGCACGTCCATCATTCTG 60.286 50.000 0.00 0.00 0.00 3.02
227 232 0.179056 AAGTTATGTCCATCCGGCCG 60.179 55.000 21.04 21.04 0.00 6.13
231 236 6.516718 AGTAGATCAAAGTTATGTCCATCCG 58.483 40.000 0.00 0.00 0.00 4.18
235 240 8.154203 TGACAAAGTAGATCAAAGTTATGTCCA 58.846 33.333 16.86 9.90 34.16 4.02
284 289 4.090819 ACCAAAGTAACACAAACCAACCT 58.909 39.130 0.00 0.00 0.00 3.50
304 309 4.032558 GCTTTCACGCCGCTATAATATACC 59.967 45.833 0.00 0.00 0.00 2.73
317 322 4.355543 TCTTGAAATATGCTTTCACGCC 57.644 40.909 0.00 0.00 38.05 5.68
328 333 9.411848 ACCCCTCTCCTAATAATCTTGAAATAT 57.588 33.333 0.00 0.00 0.00 1.28
333 338 7.175635 TCTACCCCTCTCCTAATAATCTTGA 57.824 40.000 0.00 0.00 0.00 3.02
413 418 2.723124 TTTTGCCTCGATTTCTTGGC 57.277 45.000 4.25 4.25 45.10 4.52
439 444 1.344496 CCCTCCACCTCCCTTCTACAT 60.344 57.143 0.00 0.00 0.00 2.29
442 447 1.003051 GCCCTCCACCTCCCTTCTA 59.997 63.158 0.00 0.00 0.00 2.10
459 464 5.338365 TCCTCTCTCGTATCTTAAAAACGC 58.662 41.667 0.00 0.00 36.60 4.84
477 482 6.429385 CAGAGCAAGTACAAATTTTCTCCTCT 59.571 38.462 0.00 1.36 0.00 3.69
496 1395 4.092821 CGATAAATGTTTTCGGACAGAGCA 59.907 41.667 0.00 0.00 32.19 4.26
583 1482 8.950210 GTACTCCCCCTGTTAAAAAGTATTTAC 58.050 37.037 0.00 0.00 37.28 2.01
590 1489 6.370186 AGTAGTACTCCCCCTGTTAAAAAG 57.630 41.667 0.00 0.00 0.00 2.27
601 1500 2.367894 GCCCAACATAGTAGTACTCCCC 59.632 54.545 5.96 0.00 0.00 4.81
603 1502 4.748277 TTGCCCAACATAGTAGTACTCC 57.252 45.455 5.96 0.00 0.00 3.85
604 1503 5.671493 ACATTGCCCAACATAGTAGTACTC 58.329 41.667 5.96 0.00 0.00 2.59
616 1518 4.994744 GGCTTGACATTGCCCAAC 57.005 55.556 8.36 0.00 43.11 3.77
638 1540 0.251165 AACGCCTAACCCACATGCTT 60.251 50.000 0.00 0.00 0.00 3.91
641 1543 1.066143 AGAGAACGCCTAACCCACATG 60.066 52.381 0.00 0.00 0.00 3.21
719 1621 0.831307 GGTGAGGCCCTCTCGTTATT 59.169 55.000 12.94 0.00 45.32 1.40
778 1680 2.506217 GCGATCCGCGTGAAGTGA 60.506 61.111 4.92 0.00 44.55 3.41
940 1844 3.199946 GTGGAGTAGGTGGGATTGATTGA 59.800 47.826 0.00 0.00 0.00 2.57
941 1845 3.545703 GTGGAGTAGGTGGGATTGATTG 58.454 50.000 0.00 0.00 0.00 2.67
942 1846 2.509964 GGTGGAGTAGGTGGGATTGATT 59.490 50.000 0.00 0.00 0.00 2.57
943 1847 2.127708 GGTGGAGTAGGTGGGATTGAT 58.872 52.381 0.00 0.00 0.00 2.57
944 1848 1.080498 AGGTGGAGTAGGTGGGATTGA 59.920 52.381 0.00 0.00 0.00 2.57
955 1872 2.439701 CCGGCGAGAGGTGGAGTA 60.440 66.667 9.30 0.00 0.00 2.59
996 1918 2.435938 TTGCCGGCGTCCATCTTC 60.436 61.111 23.90 0.00 0.00 2.87
1248 2211 0.826715 CACATGACCGGAGAGGATGT 59.173 55.000 9.46 5.60 45.00 3.06
1250 2213 0.689080 AGCACATGACCGGAGAGGAT 60.689 55.000 9.46 0.00 45.00 3.24
1251 2214 1.305297 AGCACATGACCGGAGAGGA 60.305 57.895 9.46 0.00 45.00 3.71
1277 2240 2.967076 ACCTGCGTTGCACAGTCG 60.967 61.111 2.52 0.00 33.79 4.18
1278 2241 2.633657 CACCTGCGTTGCACAGTC 59.366 61.111 2.52 0.00 33.79 3.51
1556 2541 0.038618 CAGCACACCGCACTACTACA 60.039 55.000 0.00 0.00 46.13 2.74
1578 2567 6.092955 ACTACATCTAACCAAACTCGAACA 57.907 37.500 0.00 0.00 0.00 3.18
1583 2572 5.520649 GCAGCTACTACATCTAACCAAACTC 59.479 44.000 0.00 0.00 0.00 3.01
1607 2596 1.565305 GCGCAGGATACAGAGTGAAG 58.435 55.000 0.30 0.00 41.41 3.02
1642 2631 1.179174 AAGCGGCTTCCCCTTTGTTC 61.179 55.000 9.94 0.00 0.00 3.18
1800 2833 4.651994 GAGGATTTTGTGCTCGTTATGTG 58.348 43.478 0.00 0.00 35.49 3.21
1817 2850 7.623999 ATGGTCTGTACAAATATGAGAGGAT 57.376 36.000 0.00 0.00 0.00 3.24
1824 2857 8.437360 TTTCAGCTATGGTCTGTACAAATATG 57.563 34.615 0.00 0.00 33.48 1.78
1827 2860 6.886459 ACATTTCAGCTATGGTCTGTACAAAT 59.114 34.615 0.00 0.00 33.48 2.32
1831 2865 7.010552 CAGTTACATTTCAGCTATGGTCTGTAC 59.989 40.741 0.27 0.00 33.48 2.90
1848 2882 5.597806 TCAGTTCTGTTCGTCAGTTACATT 58.402 37.500 9.34 0.00 43.97 2.71
1880 2914 4.074259 TGAAGATTTGTCCACCATGTGAG 58.926 43.478 0.00 0.00 35.23 3.51
1888 2922 3.753797 GAGGAACCTGAAGATTTGTCCAC 59.246 47.826 0.00 0.00 0.00 4.02
1889 2923 3.652869 AGAGGAACCTGAAGATTTGTCCA 59.347 43.478 0.00 0.00 0.00 4.02
1892 2926 4.657013 GGAAGAGGAACCTGAAGATTTGT 58.343 43.478 0.00 0.00 0.00 2.83
1896 2930 2.541466 ACGGAAGAGGAACCTGAAGAT 58.459 47.619 0.00 0.00 0.00 2.40
1897 2931 2.011122 ACGGAAGAGGAACCTGAAGA 57.989 50.000 0.00 0.00 0.00 2.87
1898 2932 2.224305 ACAACGGAAGAGGAACCTGAAG 60.224 50.000 0.00 0.00 0.00 3.02
1900 2934 1.070134 CACAACGGAAGAGGAACCTGA 59.930 52.381 0.00 0.00 0.00 3.86
1901 2935 1.512926 CACAACGGAAGAGGAACCTG 58.487 55.000 0.00 0.00 0.00 4.00
1902 2936 0.250338 GCACAACGGAAGAGGAACCT 60.250 55.000 0.00 0.00 0.00 3.50
1903 2937 0.534203 TGCACAACGGAAGAGGAACC 60.534 55.000 0.00 0.00 0.00 3.62
1904 2938 1.305201 TTGCACAACGGAAGAGGAAC 58.695 50.000 0.00 0.00 0.00 3.62
1909 2943 2.270352 AGGAATTGCACAACGGAAGA 57.730 45.000 0.00 0.00 0.00 2.87
1915 2949 1.398390 CGGCTCTAGGAATTGCACAAC 59.602 52.381 0.00 0.00 0.00 3.32
1939 2973 1.271379 GCTTCAGAGCCCTGGTAAACA 60.271 52.381 0.00 0.00 43.29 2.83
1976 3017 2.291465 TGTGCTCAGCAGAATTGTTCAC 59.709 45.455 0.00 0.00 40.08 3.18
2000 3041 1.597797 AATGTGTGCCGCCCAATCAG 61.598 55.000 0.00 0.00 0.00 2.90
2002 3043 0.037419 AAAATGTGTGCCGCCCAATC 60.037 50.000 0.00 0.00 0.00 2.67
2003 3044 0.396060 AAAAATGTGTGCCGCCCAAT 59.604 45.000 0.00 0.00 0.00 3.16
2036 3090 8.494016 AGGCGGTGATATATTTATTTAGCTTC 57.506 34.615 0.00 0.00 0.00 3.86
2045 3099 5.084519 ACAGAGGAGGCGGTGATATATTTA 58.915 41.667 0.00 0.00 0.00 1.40
2049 3103 2.158519 TGACAGAGGAGGCGGTGATATA 60.159 50.000 0.00 0.00 0.00 0.86
2055 3109 1.979693 GTCTGACAGAGGAGGCGGT 60.980 63.158 5.10 0.00 0.00 5.68
2060 3114 3.648009 GTTGAGTTGTCTGACAGAGGAG 58.352 50.000 10.77 0.00 0.00 3.69
2067 3121 0.861837 CAGCCGTTGAGTTGTCTGAC 59.138 55.000 0.00 0.00 0.00 3.51
2070 3124 0.601311 GAGCAGCCGTTGAGTTGTCT 60.601 55.000 0.00 0.00 0.00 3.41
2071 3125 0.880278 TGAGCAGCCGTTGAGTTGTC 60.880 55.000 0.00 0.00 0.00 3.18
2072 3126 0.463654 TTGAGCAGCCGTTGAGTTGT 60.464 50.000 0.00 0.00 0.00 3.32
2075 3129 1.963338 GCTTGAGCAGCCGTTGAGT 60.963 57.895 0.00 0.00 43.65 3.41
2076 3130 2.866028 GCTTGAGCAGCCGTTGAG 59.134 61.111 0.00 0.00 43.65 3.02
2084 3138 1.458827 GTTCAACGAGAGCTTGAGCAG 59.541 52.381 5.70 0.00 45.16 4.24
2085 3139 1.502231 GTTCAACGAGAGCTTGAGCA 58.498 50.000 5.70 0.00 45.16 4.26
2086 3140 0.793250 GGTTCAACGAGAGCTTGAGC 59.207 55.000 0.00 0.00 42.49 4.26
2099 3153 1.013596 CAGACGCACAACAGGTTCAA 58.986 50.000 0.00 0.00 0.00 2.69
2101 3155 1.160329 AGCAGACGCACAACAGGTTC 61.160 55.000 0.00 0.00 42.27 3.62
2102 3156 1.153168 AGCAGACGCACAACAGGTT 60.153 52.632 0.00 0.00 42.27 3.50
2108 3162 0.534877 ACAATGGAGCAGACGCACAA 60.535 50.000 0.00 0.00 42.27 3.33
2162 3217 0.966920 AGATCGGAACACGTCTTGGT 59.033 50.000 0.00 0.00 44.69 3.67
2163 3218 1.726791 CAAGATCGGAACACGTCTTGG 59.273 52.381 16.66 6.07 45.77 3.61
2165 3220 2.035449 TCACAAGATCGGAACACGTCTT 59.965 45.455 0.00 0.00 44.69 3.01
2166 3221 1.611977 TCACAAGATCGGAACACGTCT 59.388 47.619 0.00 0.00 44.69 4.18
2167 3222 2.060326 TCACAAGATCGGAACACGTC 57.940 50.000 0.00 0.00 44.69 4.34
2170 3225 2.474526 CGCATTCACAAGATCGGAACAC 60.475 50.000 0.00 0.00 0.00 3.32
2172 3227 1.999735 TCGCATTCACAAGATCGGAAC 59.000 47.619 0.00 0.00 0.00 3.62
2173 3228 1.999735 GTCGCATTCACAAGATCGGAA 59.000 47.619 0.00 0.00 0.00 4.30
2174 3229 1.640428 GTCGCATTCACAAGATCGGA 58.360 50.000 0.00 0.00 0.00 4.55
2176 3231 1.253800 CTCGTCGCATTCACAAGATCG 59.746 52.381 0.00 0.00 0.00 3.69
2177 3232 1.005557 GCTCGTCGCATTCACAAGATC 60.006 52.381 0.00 0.00 38.92 2.75
2178 3233 1.002366 GCTCGTCGCATTCACAAGAT 58.998 50.000 0.00 0.00 38.92 2.40
2179 3234 1.014044 GGCTCGTCGCATTCACAAGA 61.014 55.000 2.27 0.00 41.67 3.02
2182 3237 2.809174 CGGCTCGTCGCATTCACA 60.809 61.111 2.27 0.00 41.67 3.58
2183 3238 3.554692 CCGGCTCGTCGCATTCAC 61.555 66.667 0.00 0.00 41.67 3.18
2185 3240 3.554692 CACCGGCTCGTCGCATTC 61.555 66.667 0.00 0.00 41.67 2.67
2198 3322 4.728102 TTGTCGCCTACGCCACCG 62.728 66.667 0.00 0.00 39.84 4.94
2241 3365 3.994392 TCAGTAAACGAAATCCAGCAGAC 59.006 43.478 0.00 0.00 0.00 3.51
2255 3379 3.181501 TGCTTGGCGCATTATCAGTAAAC 60.182 43.478 10.83 0.00 45.47 2.01
2256 3380 3.013219 TGCTTGGCGCATTATCAGTAAA 58.987 40.909 10.83 0.00 45.47 2.01
2268 3392 1.583709 GCTACGATTTGCTTGGCGC 60.584 57.895 0.00 0.00 39.77 6.53
2269 3393 1.296867 CGCTACGATTTGCTTGGCG 60.297 57.895 0.00 0.00 35.54 5.69
2270 3394 0.446222 TTCGCTACGATTTGCTTGGC 59.554 50.000 0.00 0.00 35.23 4.52
2271 3395 2.351418 TGATTCGCTACGATTTGCTTGG 59.649 45.455 0.00 0.00 35.23 3.61
2272 3396 3.656651 TGATTCGCTACGATTTGCTTG 57.343 42.857 0.00 0.00 35.23 4.01
2273 3397 3.932710 TCTTGATTCGCTACGATTTGCTT 59.067 39.130 0.00 0.00 35.23 3.91
2274 3398 3.521560 TCTTGATTCGCTACGATTTGCT 58.478 40.909 0.00 0.00 35.23 3.91
2275 3399 3.307242 ACTCTTGATTCGCTACGATTTGC 59.693 43.478 0.00 0.00 35.23 3.68
2276 3400 6.569228 TTACTCTTGATTCGCTACGATTTG 57.431 37.500 0.00 0.00 35.23 2.32
2277 3401 8.867112 TTATTACTCTTGATTCGCTACGATTT 57.133 30.769 0.00 0.00 35.23 2.17
2279 3403 9.557338 GTATTATTACTCTTGATTCGCTACGAT 57.443 33.333 0.00 0.00 35.23 3.73
2280 3404 8.781196 AGTATTATTACTCTTGATTCGCTACGA 58.219 33.333 0.00 0.00 33.18 3.43
2281 3405 8.841822 CAGTATTATTACTCTTGATTCGCTACG 58.158 37.037 0.00 0.00 36.50 3.51
2282 3406 8.640291 GCAGTATTATTACTCTTGATTCGCTAC 58.360 37.037 0.00 0.00 36.50 3.58
2283 3407 8.577296 AGCAGTATTATTACTCTTGATTCGCTA 58.423 33.333 0.00 0.00 36.50 4.26
2284 3408 7.437748 AGCAGTATTATTACTCTTGATTCGCT 58.562 34.615 0.00 0.00 36.50 4.93
2285 3409 7.644986 AGCAGTATTATTACTCTTGATTCGC 57.355 36.000 0.00 0.00 36.50 4.70
2290 3414 9.817809 CAGGTTTAGCAGTATTATTACTCTTGA 57.182 33.333 0.00 0.00 36.50 3.02
2291 3415 9.601217 ACAGGTTTAGCAGTATTATTACTCTTG 57.399 33.333 0.00 0.00 36.50 3.02
2295 3419 9.392259 GGAAACAGGTTTAGCAGTATTATTACT 57.608 33.333 0.00 0.00 34.41 2.24
2296 3420 8.618677 GGGAAACAGGTTTAGCAGTATTATTAC 58.381 37.037 0.00 0.00 32.11 1.89
2297 3421 8.554011 AGGGAAACAGGTTTAGCAGTATTATTA 58.446 33.333 0.00 0.00 32.11 0.98
2298 3422 7.410991 AGGGAAACAGGTTTAGCAGTATTATT 58.589 34.615 0.00 0.00 32.11 1.40
2299 3423 6.970191 AGGGAAACAGGTTTAGCAGTATTAT 58.030 36.000 0.00 0.00 32.11 1.28
2300 3424 6.382919 AGGGAAACAGGTTTAGCAGTATTA 57.617 37.500 0.00 0.00 32.11 0.98
2301 3425 5.256806 AGGGAAACAGGTTTAGCAGTATT 57.743 39.130 0.00 0.00 32.11 1.89
2302 3426 4.929146 AGGGAAACAGGTTTAGCAGTAT 57.071 40.909 0.00 0.00 32.11 2.12
2303 3427 4.717279 AAGGGAAACAGGTTTAGCAGTA 57.283 40.909 0.00 0.00 32.11 2.74
2304 3428 3.595190 AAGGGAAACAGGTTTAGCAGT 57.405 42.857 0.00 0.00 32.11 4.40
2305 3429 4.937201 AAAAGGGAAACAGGTTTAGCAG 57.063 40.909 0.00 0.00 32.11 4.24
2324 3448 6.300703 TCCAGATTCGTTCCCTCTTTAAAAA 58.699 36.000 0.00 0.00 0.00 1.94
2325 3449 5.871834 TCCAGATTCGTTCCCTCTTTAAAA 58.128 37.500 0.00 0.00 0.00 1.52
2326 3450 5.247564 TCTCCAGATTCGTTCCCTCTTTAAA 59.752 40.000 0.00 0.00 0.00 1.52
2327 3451 4.775780 TCTCCAGATTCGTTCCCTCTTTAA 59.224 41.667 0.00 0.00 0.00 1.52
2328 3452 4.350245 TCTCCAGATTCGTTCCCTCTTTA 58.650 43.478 0.00 0.00 0.00 1.85
2329 3453 3.173965 TCTCCAGATTCGTTCCCTCTTT 58.826 45.455 0.00 0.00 0.00 2.52
2330 3454 2.821437 TCTCCAGATTCGTTCCCTCTT 58.179 47.619 0.00 0.00 0.00 2.85
2331 3455 2.534042 TCTCCAGATTCGTTCCCTCT 57.466 50.000 0.00 0.00 0.00 3.69
2332 3456 3.828875 ATTCTCCAGATTCGTTCCCTC 57.171 47.619 0.00 0.00 0.00 4.30
2333 3457 8.666129 TTATATATTCTCCAGATTCGTTCCCT 57.334 34.615 0.00 0.00 0.00 4.20
2334 3458 9.152595 GTTTATATATTCTCCAGATTCGTTCCC 57.847 37.037 0.00 0.00 0.00 3.97
2335 3459 9.706691 TGTTTATATATTCTCCAGATTCGTTCC 57.293 33.333 0.00 0.00 0.00 3.62
2343 3467 9.346005 TGTCGTACTGTTTATATATTCTCCAGA 57.654 33.333 0.00 0.00 0.00 3.86
2344 3468 9.961265 TTGTCGTACTGTTTATATATTCTCCAG 57.039 33.333 0.00 0.00 0.00 3.86
2345 3469 9.740239 GTTGTCGTACTGTTTATATATTCTCCA 57.260 33.333 0.00 0.00 0.00 3.86
2346 3470 8.899776 CGTTGTCGTACTGTTTATATATTCTCC 58.100 37.037 0.00 0.00 0.00 3.71
2347 3471 8.415673 GCGTTGTCGTACTGTTTATATATTCTC 58.584 37.037 0.00 0.00 39.49 2.87
2348 3472 7.112565 CGCGTTGTCGTACTGTTTATATATTCT 59.887 37.037 0.00 0.00 39.49 2.40
2349 3473 7.112009 TCGCGTTGTCGTACTGTTTATATATTC 59.888 37.037 5.77 0.00 39.49 1.75
2350 3474 6.912051 TCGCGTTGTCGTACTGTTTATATATT 59.088 34.615 5.77 0.00 39.49 1.28
2351 3475 6.429624 TCGCGTTGTCGTACTGTTTATATAT 58.570 36.000 5.77 0.00 39.49 0.86
2352 3476 5.805229 TCGCGTTGTCGTACTGTTTATATA 58.195 37.500 5.77 0.00 39.49 0.86
2353 3477 4.661125 TCGCGTTGTCGTACTGTTTATAT 58.339 39.130 5.77 0.00 39.49 0.86
2354 3478 4.077063 TCGCGTTGTCGTACTGTTTATA 57.923 40.909 5.77 0.00 39.49 0.98
2355 3479 2.912967 CTCGCGTTGTCGTACTGTTTAT 59.087 45.455 5.77 0.00 39.49 1.40
2356 3480 2.286950 ACTCGCGTTGTCGTACTGTTTA 60.287 45.455 5.77 0.00 39.49 2.01
2357 3481 1.126079 CTCGCGTTGTCGTACTGTTT 58.874 50.000 5.77 0.00 39.49 2.83
2358 3482 0.029834 ACTCGCGTTGTCGTACTGTT 59.970 50.000 5.77 0.00 39.49 3.16
2359 3483 0.659417 CACTCGCGTTGTCGTACTGT 60.659 55.000 5.77 0.00 39.49 3.55
2360 3484 0.659417 ACACTCGCGTTGTCGTACTG 60.659 55.000 5.77 0.00 39.49 2.74
2361 3485 0.029834 AACACTCGCGTTGTCGTACT 59.970 50.000 14.86 0.00 39.49 2.73
2362 3486 1.640915 CTAACACTCGCGTTGTCGTAC 59.359 52.381 14.86 0.00 39.49 3.67
2363 3487 1.530720 TCTAACACTCGCGTTGTCGTA 59.469 47.619 14.86 5.93 39.49 3.43
2364 3488 0.308684 TCTAACACTCGCGTTGTCGT 59.691 50.000 14.86 9.35 39.49 4.34
2365 3489 0.701303 GTCTAACACTCGCGTTGTCG 59.299 55.000 14.86 10.20 40.37 4.35
2366 3490 1.762419 TGTCTAACACTCGCGTTGTC 58.238 50.000 14.86 5.23 0.00 3.18
2367 3491 2.212869 TTGTCTAACACTCGCGTTGT 57.787 45.000 5.77 8.26 0.00 3.32
2368 3492 2.092211 GGATTGTCTAACACTCGCGTTG 59.908 50.000 5.77 7.52 29.60 4.10
2369 3493 2.288579 TGGATTGTCTAACACTCGCGTT 60.289 45.455 5.77 0.00 29.60 4.84
2370 3494 1.271379 TGGATTGTCTAACACTCGCGT 59.729 47.619 5.77 0.00 29.60 6.01
2371 3495 1.990799 TGGATTGTCTAACACTCGCG 58.009 50.000 0.00 0.00 29.60 5.87
2372 3496 2.092211 CGTTGGATTGTCTAACACTCGC 59.908 50.000 6.93 0.00 37.66 5.03
2373 3497 3.121279 CACGTTGGATTGTCTAACACTCG 59.879 47.826 6.93 0.00 37.66 4.18
2374 3498 4.304110 TCACGTTGGATTGTCTAACACTC 58.696 43.478 6.93 0.00 37.66 3.51
2375 3499 4.038763 TCTCACGTTGGATTGTCTAACACT 59.961 41.667 6.93 0.00 37.66 3.55
2376 3500 4.304110 TCTCACGTTGGATTGTCTAACAC 58.696 43.478 6.93 0.00 37.66 3.32
2377 3501 4.594123 TCTCACGTTGGATTGTCTAACA 57.406 40.909 6.93 0.00 37.66 2.41
2378 3502 6.237861 GCTTATCTCACGTTGGATTGTCTAAC 60.238 42.308 5.51 0.00 34.94 2.34
2379 3503 5.810587 GCTTATCTCACGTTGGATTGTCTAA 59.189 40.000 5.51 0.00 0.00 2.10
2380 3504 5.105513 TGCTTATCTCACGTTGGATTGTCTA 60.106 40.000 5.51 0.00 0.00 2.59
2381 3505 4.184629 GCTTATCTCACGTTGGATTGTCT 58.815 43.478 5.51 0.00 0.00 3.41
2382 3506 3.932710 TGCTTATCTCACGTTGGATTGTC 59.067 43.478 5.51 0.00 0.00 3.18
2383 3507 3.684788 GTGCTTATCTCACGTTGGATTGT 59.315 43.478 5.51 0.00 0.00 2.71
2384 3508 3.684305 TGTGCTTATCTCACGTTGGATTG 59.316 43.478 5.51 2.20 37.26 2.67
2385 3509 3.684788 GTGTGCTTATCTCACGTTGGATT 59.315 43.478 5.51 0.00 37.26 3.01
2386 3510 3.055819 AGTGTGCTTATCTCACGTTGGAT 60.056 43.478 5.52 5.52 42.34 3.41
2387 3511 2.299013 AGTGTGCTTATCTCACGTTGGA 59.701 45.455 0.00 0.00 42.34 3.53
2388 3512 2.688507 AGTGTGCTTATCTCACGTTGG 58.311 47.619 0.00 0.00 42.34 3.77
2389 3513 4.457810 CAAAGTGTGCTTATCTCACGTTG 58.542 43.478 9.81 9.81 44.98 4.10
2390 3514 4.377021 TCAAAGTGTGCTTATCTCACGTT 58.623 39.130 0.00 0.00 42.34 3.99
2391 3515 3.990092 TCAAAGTGTGCTTATCTCACGT 58.010 40.909 0.00 0.00 42.34 4.49
2392 3516 3.990469 ACTCAAAGTGTGCTTATCTCACG 59.010 43.478 0.00 0.00 42.34 4.35
2393 3517 5.388890 CGAACTCAAAGTGTGCTTATCTCAC 60.389 44.000 0.00 0.00 38.96 3.51
2394 3518 4.686091 CGAACTCAAAGTGTGCTTATCTCA 59.314 41.667 0.00 0.00 33.95 3.27
2395 3519 4.092091 CCGAACTCAAAGTGTGCTTATCTC 59.908 45.833 0.00 0.00 33.95 2.75
2396 3520 3.997021 CCGAACTCAAAGTGTGCTTATCT 59.003 43.478 0.00 0.00 33.95 1.98
2397 3521 3.424962 GCCGAACTCAAAGTGTGCTTATC 60.425 47.826 0.00 0.00 33.95 1.75
2398 3522 2.484264 GCCGAACTCAAAGTGTGCTTAT 59.516 45.455 0.00 0.00 33.95 1.73
2399 3523 1.871039 GCCGAACTCAAAGTGTGCTTA 59.129 47.619 0.00 0.00 33.95 3.09
2400 3524 0.663153 GCCGAACTCAAAGTGTGCTT 59.337 50.000 0.00 0.00 36.30 3.91
2401 3525 0.179045 AGCCGAACTCAAAGTGTGCT 60.179 50.000 0.00 0.00 0.00 4.40
2402 3526 0.663153 AAGCCGAACTCAAAGTGTGC 59.337 50.000 0.00 0.00 0.00 4.57
2403 3527 4.749245 ATTAAGCCGAACTCAAAGTGTG 57.251 40.909 0.00 0.00 0.00 3.82
2404 3528 5.585047 GGATATTAAGCCGAACTCAAAGTGT 59.415 40.000 0.00 0.00 0.00 3.55
2405 3529 6.049263 GGATATTAAGCCGAACTCAAAGTG 57.951 41.667 0.00 0.00 0.00 3.16
2418 3542 4.449405 GTCTTCTTGGCTCGGATATTAAGC 59.551 45.833 0.00 0.00 35.27 3.09
2419 3543 5.463724 GTGTCTTCTTGGCTCGGATATTAAG 59.536 44.000 0.00 0.00 0.00 1.85
2420 3544 5.105106 TGTGTCTTCTTGGCTCGGATATTAA 60.105 40.000 0.00 0.00 0.00 1.40
2421 3545 4.404394 TGTGTCTTCTTGGCTCGGATATTA 59.596 41.667 0.00 0.00 0.00 0.98
2422 3546 3.197766 TGTGTCTTCTTGGCTCGGATATT 59.802 43.478 0.00 0.00 0.00 1.28
2423 3547 2.766263 TGTGTCTTCTTGGCTCGGATAT 59.234 45.455 0.00 0.00 0.00 1.63
2424 3548 2.094182 GTGTGTCTTCTTGGCTCGGATA 60.094 50.000 0.00 0.00 0.00 2.59
2425 3549 0.976641 TGTGTCTTCTTGGCTCGGAT 59.023 50.000 0.00 0.00 0.00 4.18
2426 3550 0.033504 GTGTGTCTTCTTGGCTCGGA 59.966 55.000 0.00 0.00 0.00 4.55
2427 3551 1.284982 CGTGTGTCTTCTTGGCTCGG 61.285 60.000 0.00 0.00 0.00 4.63
2428 3552 0.318699 TCGTGTGTCTTCTTGGCTCG 60.319 55.000 0.00 0.00 0.00 5.03
2429 3553 1.140816 GTCGTGTGTCTTCTTGGCTC 58.859 55.000 0.00 0.00 0.00 4.70
2430 3554 0.464036 TGTCGTGTGTCTTCTTGGCT 59.536 50.000 0.00 0.00 0.00 4.75
2431 3555 1.003866 GTTGTCGTGTGTCTTCTTGGC 60.004 52.381 0.00 0.00 0.00 4.52
2432 3556 2.276201 TGTTGTCGTGTGTCTTCTTGG 58.724 47.619 0.00 0.00 0.00 3.61
2433 3557 3.186909 TCTGTTGTCGTGTGTCTTCTTG 58.813 45.455 0.00 0.00 0.00 3.02
2434 3558 3.520290 TCTGTTGTCGTGTGTCTTCTT 57.480 42.857 0.00 0.00 0.00 2.52
2435 3559 3.520290 TTCTGTTGTCGTGTGTCTTCT 57.480 42.857 0.00 0.00 0.00 2.85
2436 3560 3.863424 TCTTTCTGTTGTCGTGTGTCTTC 59.137 43.478 0.00 0.00 0.00 2.87
2437 3561 3.857052 TCTTTCTGTTGTCGTGTGTCTT 58.143 40.909 0.00 0.00 0.00 3.01
2438 3562 3.520290 TCTTTCTGTTGTCGTGTGTCT 57.480 42.857 0.00 0.00 0.00 3.41
2439 3563 4.518217 CATTCTTTCTGTTGTCGTGTGTC 58.482 43.478 0.00 0.00 0.00 3.67
2440 3564 3.312421 CCATTCTTTCTGTTGTCGTGTGT 59.688 43.478 0.00 0.00 0.00 3.72
2441 3565 3.559655 TCCATTCTTTCTGTTGTCGTGTG 59.440 43.478 0.00 0.00 0.00 3.82
2442 3566 3.804036 TCCATTCTTTCTGTTGTCGTGT 58.196 40.909 0.00 0.00 0.00 4.49
2443 3567 4.058124 TCTCCATTCTTTCTGTTGTCGTG 58.942 43.478 0.00 0.00 0.00 4.35
2444 3568 4.336889 TCTCCATTCTTTCTGTTGTCGT 57.663 40.909 0.00 0.00 0.00 4.34
2445 3569 4.511454 TGTTCTCCATTCTTTCTGTTGTCG 59.489 41.667 0.00 0.00 0.00 4.35
2446 3570 6.376978 CATGTTCTCCATTCTTTCTGTTGTC 58.623 40.000 0.00 0.00 0.00 3.18
2447 3571 5.242393 CCATGTTCTCCATTCTTTCTGTTGT 59.758 40.000 0.00 0.00 0.00 3.32
2448 3572 5.242393 ACCATGTTCTCCATTCTTTCTGTTG 59.758 40.000 0.00 0.00 0.00 3.33
2449 3573 5.242393 CACCATGTTCTCCATTCTTTCTGTT 59.758 40.000 0.00 0.00 0.00 3.16
2450 3574 4.763793 CACCATGTTCTCCATTCTTTCTGT 59.236 41.667 0.00 0.00 0.00 3.41
2451 3575 4.157289 CCACCATGTTCTCCATTCTTTCTG 59.843 45.833 0.00 0.00 0.00 3.02
2452 3576 4.338879 CCACCATGTTCTCCATTCTTTCT 58.661 43.478 0.00 0.00 0.00 2.52
2453 3577 3.445096 CCCACCATGTTCTCCATTCTTTC 59.555 47.826 0.00 0.00 0.00 2.62
2454 3578 3.075882 TCCCACCATGTTCTCCATTCTTT 59.924 43.478 0.00 0.00 0.00 2.52
2455 3579 2.649312 TCCCACCATGTTCTCCATTCTT 59.351 45.455 0.00 0.00 0.00 2.52
2456 3580 2.278245 TCCCACCATGTTCTCCATTCT 58.722 47.619 0.00 0.00 0.00 2.40
2457 3581 2.806945 TCCCACCATGTTCTCCATTC 57.193 50.000 0.00 0.00 0.00 2.67
2458 3582 3.541242 TTTCCCACCATGTTCTCCATT 57.459 42.857 0.00 0.00 0.00 3.16
2459 3583 3.368248 CATTTCCCACCATGTTCTCCAT 58.632 45.455 0.00 0.00 0.00 3.41
2460 3584 2.806434 CATTTCCCACCATGTTCTCCA 58.194 47.619 0.00 0.00 0.00 3.86
2461 3585 1.478105 GCATTTCCCACCATGTTCTCC 59.522 52.381 0.00 0.00 0.00 3.71
2462 3586 2.170166 TGCATTTCCCACCATGTTCTC 58.830 47.619 0.00 0.00 0.00 2.87
2463 3587 2.307496 TGCATTTCCCACCATGTTCT 57.693 45.000 0.00 0.00 0.00 3.01
2464 3588 3.264104 CAATGCATTTCCCACCATGTTC 58.736 45.455 9.83 0.00 0.00 3.18
2465 3589 2.027007 CCAATGCATTTCCCACCATGTT 60.027 45.455 9.83 0.00 0.00 2.71
2466 3590 1.555992 CCAATGCATTTCCCACCATGT 59.444 47.619 9.83 0.00 0.00 3.21
2467 3591 1.832366 TCCAATGCATTTCCCACCATG 59.168 47.619 9.83 0.00 0.00 3.66
2468 3592 2.112998 CTCCAATGCATTTCCCACCAT 58.887 47.619 9.83 0.00 0.00 3.55
2469 3593 1.559368 CTCCAATGCATTTCCCACCA 58.441 50.000 9.83 0.00 0.00 4.17
2470 3594 0.176449 GCTCCAATGCATTTCCCACC 59.824 55.000 9.83 0.00 0.00 4.61
2471 3595 0.896923 TGCTCCAATGCATTTCCCAC 59.103 50.000 9.83 0.00 38.12 4.61
2472 3596 0.896923 GTGCTCCAATGCATTTCCCA 59.103 50.000 9.83 2.05 45.23 4.37
2473 3597 0.176449 GGTGCTCCAATGCATTTCCC 59.824 55.000 9.83 0.00 45.23 3.97
2474 3598 0.176449 GGGTGCTCCAATGCATTTCC 59.824 55.000 9.83 5.72 45.23 3.13
2475 3599 0.179129 CGGGTGCTCCAATGCATTTC 60.179 55.000 9.83 0.13 45.23 2.17
2476 3600 1.606885 CCGGGTGCTCCAATGCATTT 61.607 55.000 9.83 0.00 45.23 2.32
2477 3601 2.053865 CCGGGTGCTCCAATGCATT 61.054 57.895 5.99 5.99 45.23 3.56
2478 3602 2.440796 CCGGGTGCTCCAATGCAT 60.441 61.111 7.20 0.00 45.23 3.96
2479 3603 4.738998 CCCGGGTGCTCCAATGCA 62.739 66.667 14.18 0.00 41.05 3.96
2481 3605 4.738998 TGCCCGGGTGCTCCAATG 62.739 66.667 24.63 0.00 34.36 2.82
2482 3606 4.740822 GTGCCCGGGTGCTCCAAT 62.741 66.667 24.63 0.00 34.36 3.16
2505 3629 8.934023 TTTTAGTGCTATTTTCATATAGGGGG 57.066 34.615 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.