Multiple sequence alignment - TraesCS1B01G044600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G044600 chr1B 100.000 5079 0 0 1 5079 24510227 24515305 0.000000e+00 9380.0
1 TraesCS1B01G044600 chr1B 92.526 1833 108 12 1421 3247 24715817 24714008 0.000000e+00 2599.0
2 TraesCS1B01G044600 chr1B 90.642 1261 87 14 1997 3247 24352656 24351417 0.000000e+00 1646.0
3 TraesCS1B01G044600 chr1B 91.783 645 33 7 3472 4102 24713752 24713114 0.000000e+00 880.0
4 TraesCS1B01G044600 chr1B 88.066 662 51 12 3472 4118 24351160 24350512 0.000000e+00 760.0
5 TraesCS1B01G044600 chr1B 79.625 1119 163 43 2162 3244 24566323 24565234 0.000000e+00 743.0
6 TraesCS1B01G044600 chr1B 84.056 784 65 14 4260 4987 24687178 24686399 0.000000e+00 701.0
7 TraesCS1B01G044600 chr1B 86.859 624 59 7 1380 1982 24353320 24352699 0.000000e+00 676.0
8 TraesCS1B01G044600 chr1B 84.844 673 72 14 3488 4140 24564951 24564289 0.000000e+00 651.0
9 TraesCS1B01G044600 chr1B 90.323 496 42 5 857 1348 24716461 24715968 0.000000e+00 645.0
10 TraesCS1B01G044600 chr1B 81.295 695 99 22 2564 3244 24537824 24537147 7.480000e-148 534.0
11 TraesCS1B01G044600 chr1B 82.585 557 71 14 3488 4031 24536865 24536322 7.700000e-128 468.0
12 TraesCS1B01G044600 chr1B 88.696 345 26 6 440 779 24716672 24716336 4.730000e-110 409.0
13 TraesCS1B01G044600 chr1B 88.131 337 35 3 1419 1755 24567228 24566897 3.690000e-106 396.0
14 TraesCS1B01G044600 chr1B 88.971 272 25 5 691 958 24568084 24567814 1.050000e-86 331.0
15 TraesCS1B01G044600 chr1B 84.570 337 44 4 1419 1755 24544653 24544325 1.360000e-85 327.0
16 TraesCS1B01G044600 chr1B 93.382 136 8 1 3335 3470 24351415 24351281 3.100000e-47 200.0
17 TraesCS1B01G044600 chr1B 81.522 276 22 11 439 713 24568261 24568014 3.100000e-47 200.0
18 TraesCS1B01G044600 chr1B 91.304 138 9 3 3335 3472 24714006 24713872 8.680000e-43 185.0
19 TraesCS1B01G044600 chr1B 97.872 94 2 0 4986 5079 415740464 415740371 4.070000e-36 163.0
20 TraesCS1B01G044600 chr1B 97.872 94 2 0 4986 5079 541397434 541397341 4.070000e-36 163.0
21 TraesCS1B01G044600 chr1B 86.885 122 9 3 276 391 24716800 24716680 4.130000e-26 130.0
22 TraesCS1B01G044600 chr1B 81.295 139 20 5 3335 3468 24537137 24537000 1.930000e-19 108.0
23 TraesCS1B01G044600 chr1A 92.845 2432 119 34 826 3247 16816530 16814144 0.000000e+00 3476.0
24 TraesCS1B01G044600 chr1A 88.078 822 52 14 3472 4253 16813888 16813073 0.000000e+00 933.0
25 TraesCS1B01G044600 chr1A 79.576 1131 159 43 2162 3244 16549193 16550299 0.000000e+00 743.0
26 TraesCS1B01G044600 chr1A 88.521 514 49 6 446 958 16547194 16547698 9.350000e-172 614.0
27 TraesCS1B01G044600 chr1A 83.658 667 79 19 3488 4140 16550584 16551234 7.280000e-168 601.0
28 TraesCS1B01G044600 chr1A 79.240 737 136 14 635 1361 16547474 16548203 9.820000e-137 497.0
29 TraesCS1B01G044600 chr1A 87.353 340 39 2 1416 1755 16548287 16548622 2.220000e-103 387.0
30 TraesCS1B01G044600 chr1A 90.104 192 14 1 460 651 16821788 16821602 1.410000e-60 244.0
31 TraesCS1B01G044600 chr1A 95.588 136 4 2 3335 3470 16814142 16814009 3.080000e-52 217.0
32 TraesCS1B01G044600 chr1D 94.381 1833 87 11 1419 3247 16164997 16163177 0.000000e+00 2800.0
33 TraesCS1B01G044600 chr1D 87.591 822 53 15 3472 4253 16162920 16162108 0.000000e+00 907.0
34 TraesCS1B01G044600 chr1D 84.419 783 64 10 4260 4987 16161630 16160851 0.000000e+00 717.0
35 TraesCS1B01G044600 chr1D 85.329 668 70 15 3488 4139 16210936 16210281 0.000000e+00 665.0
36 TraesCS1B01G044600 chr1D 91.048 458 34 5 492 949 16213888 16213438 3.360000e-171 612.0
37 TraesCS1B01G044600 chr1D 91.727 278 21 2 1085 1360 16165401 16165124 7.980000e-103 385.0
38 TraesCS1B01G044600 chr1D 84.706 340 42 8 1419 1755 16213208 16212876 1.050000e-86 331.0
39 TraesCS1B01G044600 chr1D 83.284 335 49 6 2162 2493 16212323 16211993 8.260000e-78 302.0
40 TraesCS1B01G044600 chr1D 87.783 221 26 1 1 220 165120902 165120682 1.810000e-64 257.0
41 TraesCS1B01G044600 chr1D 85.520 221 30 2 1 220 298650168 298649949 3.960000e-56 230.0
42 TraesCS1B01G044600 chr1D 96.377 138 4 1 3335 3472 16163175 16163039 5.120000e-55 226.0
43 TraesCS1B01G044600 chr1D 89.928 139 14 0 1223 1361 16213430 16213292 4.040000e-41 180.0
44 TraesCS1B01G044600 chr1D 88.000 100 5 2 4895 4987 16207382 16207283 1.490000e-20 111.0
45 TraesCS1B01G044600 chr1D 76.720 189 30 8 870 1054 16165583 16165405 5.410000e-15 93.5
46 TraesCS1B01G044600 chr3D 84.420 276 35 4 1 276 439204268 439204535 1.080000e-66 265.0
47 TraesCS1B01G044600 chr3D 85.520 221 30 2 1 220 368301400 368301181 3.960000e-56 230.0
48 TraesCS1B01G044600 chr4D 88.372 215 24 1 7 220 494649121 494648907 1.810000e-64 257.0
49 TraesCS1B01G044600 chr4D 96.809 94 3 0 4986 5079 17209609 17209516 1.890000e-34 158.0
50 TraesCS1B01G044600 chr7D 83.755 277 36 5 1 276 320088692 320088424 2.350000e-63 254.0
51 TraesCS1B01G044600 chr7D 82.609 276 40 6 1 276 21668523 21668790 2.360000e-58 237.0
52 TraesCS1B01G044600 chr5D 83.696 276 37 4 1 276 255766476 255766743 2.350000e-63 254.0
53 TraesCS1B01G044600 chr5D 98.936 94 1 0 4986 5079 535804688 535804781 8.750000e-38 169.0
54 TraesCS1B01G044600 chr5D 93.750 96 5 1 3239 3334 56448454 56448548 5.300000e-30 143.0
55 TraesCS1B01G044600 chr3B 83.394 277 37 5 1 276 371983065 371982797 1.090000e-61 248.0
56 TraesCS1B01G044600 chrUn 98.936 94 1 0 4986 5079 86800283 86800376 8.750000e-38 169.0
57 TraesCS1B01G044600 chr7A 98.936 94 1 0 4986 5079 717917985 717917892 8.750000e-38 169.0
58 TraesCS1B01G044600 chr7A 97.872 94 2 0 4986 5079 686570959 686570866 4.070000e-36 163.0
59 TraesCS1B01G044600 chr5B 98.936 94 1 0 4986 5079 538266679 538266586 8.750000e-38 169.0
60 TraesCS1B01G044600 chr5B 92.079 101 6 2 3230 3330 22532743 22532645 1.910000e-29 141.0
61 TraesCS1B01G044600 chr3A 98.936 94 1 0 4986 5079 19272967 19273060 8.750000e-38 169.0
62 TraesCS1B01G044600 chr6B 93.333 105 7 0 3232 3336 576856619 576856723 6.810000e-34 156.0
63 TraesCS1B01G044600 chr6B 94.681 94 4 1 3246 3338 680166608 680166515 1.470000e-30 145.0
64 TraesCS1B01G044600 chr6B 90.654 107 6 4 3246 3348 342998203 342998097 6.860000e-29 139.0
65 TraesCS1B01G044600 chr2D 96.667 90 3 0 3246 3335 638323081 638323170 3.170000e-32 150.0
66 TraesCS1B01G044600 chr7B 93.069 101 5 2 3242 3340 598012119 598012019 4.100000e-31 147.0
67 TraesCS1B01G044600 chr7B 92.233 103 5 3 3231 3330 312542077 312542179 5.300000e-30 143.0
68 TraesCS1B01G044600 chr4B 92.079 101 7 1 3244 3343 179437358 179437458 1.910000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G044600 chr1B 24510227 24515305 5078 False 9380.000000 9380 100.000000 1 5079 1 chr1B.!!$F1 5078
1 TraesCS1B01G044600 chr1B 24350512 24353320 2808 True 820.500000 1646 89.737250 1380 4118 4 chr1B.!!$R5 2738
2 TraesCS1B01G044600 chr1B 24713114 24716800 3686 True 808.000000 2599 90.252833 276 4102 6 chr1B.!!$R8 3826
3 TraesCS1B01G044600 chr1B 24686399 24687178 779 True 701.000000 701 84.056000 4260 4987 1 chr1B.!!$R2 727
4 TraesCS1B01G044600 chr1B 24564289 24568261 3972 True 464.200000 743 84.618600 439 4140 5 chr1B.!!$R7 3701
5 TraesCS1B01G044600 chr1B 24536322 24537824 1502 True 370.000000 534 81.725000 2564 4031 3 chr1B.!!$R6 1467
6 TraesCS1B01G044600 chr1A 16813073 16816530 3457 True 1542.000000 3476 92.170333 826 4253 3 chr1A.!!$R2 3427
7 TraesCS1B01G044600 chr1A 16547194 16551234 4040 False 568.400000 743 83.669600 446 4140 5 chr1A.!!$F1 3694
8 TraesCS1B01G044600 chr1D 16160851 16165583 4732 True 854.750000 2800 88.535833 870 4987 6 chr1D.!!$R3 4117
9 TraesCS1B01G044600 chr1D 16207283 16213888 6605 True 366.833333 665 87.049167 492 4987 6 chr1D.!!$R4 4495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
532 539 0.250553 CGCCCCGCCTCCATTAAATA 60.251 55.000 0.00 0.0 0.00 1.40 F
559 576 1.082954 AGGGCCTTAGGAAGCTCCA 59.917 57.895 0.00 0.0 39.61 3.86 F
616 633 1.209275 GAATCAGATCGGCGACACGG 61.209 60.000 13.76 10.7 0.00 4.94 F
839 862 1.529948 TGTCAGTCCCTCCGTCGTT 60.530 57.895 0.00 0.0 0.00 3.85 F
1048 1176 2.168728 GCCAGTTCCTCGAAATCTAGGT 59.831 50.000 1.41 0.0 34.30 3.08 F
1371 1501 2.783379 TCCTAGTCCTGCCATCATCT 57.217 50.000 0.00 0.0 0.00 2.90 F
3018 3657 2.440539 AGAAAGAACGAGACGTGCAT 57.559 45.000 0.00 0.0 39.99 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1348 1478 2.050144 TGATGGCAGGACTAGGAATCC 58.950 52.381 0.00 0.00 36.38 3.01 R
2436 3015 2.936919 AGCTTCAATCCACTGTCACA 57.063 45.000 0.00 0.00 0.00 3.58 R
2601 3225 3.623060 GCGATCTTGATTGCTTGGTAAGA 59.377 43.478 13.89 0.00 32.57 2.10 R
2834 3458 4.935808 GGTTGTTCAGTACTAACCTCCATG 59.064 45.833 15.29 0.00 36.16 3.66 R
3007 3646 1.325640 CATTCTCCAATGCACGTCTCG 59.674 52.381 0.00 0.00 33.19 4.04 R
3314 3957 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37 R
4999 8278 0.165511 CGAACTGCTTGAGCTTCAGC 59.834 55.000 10.45 10.45 42.66 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.599866 TGTACTCATCTATTTGTTATCCAGTTG 57.400 33.333 0.00 0.00 0.00 3.16
43 44 9.046296 GTACTCATCTATTTGTTATCCAGTTGG 57.954 37.037 0.00 0.00 0.00 3.77
44 45 7.056635 ACTCATCTATTTGTTATCCAGTTGGG 58.943 38.462 0.00 0.00 35.41 4.12
60 61 8.893563 TCCAGTTGGGATAAATATCTTTTTGT 57.106 30.769 0.00 0.00 42.15 2.83
61 62 8.966868 TCCAGTTGGGATAAATATCTTTTTGTC 58.033 33.333 0.00 0.00 42.15 3.18
62 63 8.748412 CCAGTTGGGATAAATATCTTTTTGTCA 58.252 33.333 0.81 0.00 40.01 3.58
77 78 9.726232 ATCTTTTTGTCAAATGTGATATCGATG 57.274 29.630 8.54 0.00 35.80 3.84
78 79 8.945057 TCTTTTTGTCAAATGTGATATCGATGA 58.055 29.630 8.54 0.00 35.80 2.92
79 80 9.558648 CTTTTTGTCAAATGTGATATCGATGAA 57.441 29.630 8.54 0.00 35.80 2.57
81 82 9.505995 TTTTGTCAAATGTGATATCGATGAATG 57.494 29.630 8.54 0.00 35.80 2.67
82 83 7.790823 TGTCAAATGTGATATCGATGAATGT 57.209 32.000 8.54 0.00 35.80 2.71
83 84 8.885494 TGTCAAATGTGATATCGATGAATGTA 57.115 30.769 8.54 0.00 35.80 2.29
84 85 9.323985 TGTCAAATGTGATATCGATGAATGTAA 57.676 29.630 8.54 0.00 35.80 2.41
118 119 6.613755 AACTTGTGTAGTGTTTGATGTACC 57.386 37.500 0.00 0.00 37.12 3.34
119 120 5.061179 ACTTGTGTAGTGTTTGATGTACCC 58.939 41.667 0.00 0.00 35.19 3.69
120 121 3.655486 TGTGTAGTGTTTGATGTACCCG 58.345 45.455 0.00 0.00 0.00 5.28
121 122 3.069872 TGTGTAGTGTTTGATGTACCCGT 59.930 43.478 0.00 0.00 0.00 5.28
122 123 4.060205 GTGTAGTGTTTGATGTACCCGTT 58.940 43.478 0.00 0.00 0.00 4.44
123 124 4.059511 TGTAGTGTTTGATGTACCCGTTG 58.940 43.478 0.00 0.00 0.00 4.10
124 125 2.500229 AGTGTTTGATGTACCCGTTGG 58.500 47.619 0.00 0.00 37.80 3.77
166 167 3.421567 GTCGGGTACGGGTATAGGT 57.578 57.895 0.00 0.00 41.39 3.08
167 168 2.561478 GTCGGGTACGGGTATAGGTA 57.439 55.000 0.00 0.00 41.39 3.08
168 169 2.858745 GTCGGGTACGGGTATAGGTAA 58.141 52.381 0.00 0.00 41.39 2.85
169 170 3.219281 GTCGGGTACGGGTATAGGTAAA 58.781 50.000 0.00 0.00 41.39 2.01
170 171 3.253432 GTCGGGTACGGGTATAGGTAAAG 59.747 52.174 0.00 0.00 41.39 1.85
171 172 3.117663 TCGGGTACGGGTATAGGTAAAGT 60.118 47.826 0.00 0.00 41.39 2.66
172 173 3.636764 CGGGTACGGGTATAGGTAAAGTT 59.363 47.826 0.00 0.00 36.18 2.66
173 174 4.099419 CGGGTACGGGTATAGGTAAAGTTT 59.901 45.833 0.00 0.00 36.18 2.66
174 175 5.601662 GGGTACGGGTATAGGTAAAGTTTC 58.398 45.833 0.00 0.00 0.00 2.78
175 176 5.453339 GGGTACGGGTATAGGTAAAGTTTCC 60.453 48.000 0.00 0.00 0.00 3.13
176 177 5.363868 GGTACGGGTATAGGTAAAGTTTCCT 59.636 44.000 10.29 10.29 37.80 3.36
177 178 6.549736 GGTACGGGTATAGGTAAAGTTTCCTA 59.450 42.308 13.05 13.05 40.07 2.94
178 179 6.471233 ACGGGTATAGGTAAAGTTTCCTAC 57.529 41.667 12.98 7.01 38.84 3.18
179 180 5.363868 ACGGGTATAGGTAAAGTTTCCTACC 59.636 44.000 12.98 12.92 38.84 3.18
180 181 5.221521 CGGGTATAGGTAAAGTTTCCTACCC 60.222 48.000 21.39 21.39 43.76 3.69
181 182 5.221521 GGGTATAGGTAAAGTTTCCTACCCG 60.222 48.000 19.09 0.00 40.57 5.28
182 183 5.363868 GGTATAGGTAAAGTTTCCTACCCGT 59.636 44.000 12.98 2.60 38.73 5.28
183 184 6.549736 GGTATAGGTAAAGTTTCCTACCCGTA 59.450 42.308 12.98 1.87 38.73 4.02
184 185 6.721704 ATAGGTAAAGTTTCCTACCCGTAG 57.278 41.667 12.98 0.00 38.73 3.51
185 186 4.677182 AGGTAAAGTTTCCTACCCGTAGA 58.323 43.478 3.37 0.00 38.73 2.59
186 187 5.275630 AGGTAAAGTTTCCTACCCGTAGAT 58.724 41.667 3.37 0.00 38.73 1.98
187 188 6.435164 AGGTAAAGTTTCCTACCCGTAGATA 58.565 40.000 3.37 0.00 38.73 1.98
188 189 7.071917 AGGTAAAGTTTCCTACCCGTAGATAT 58.928 38.462 3.37 0.00 38.73 1.63
189 190 7.015001 AGGTAAAGTTTCCTACCCGTAGATATG 59.985 40.741 3.37 0.00 38.73 1.78
190 191 5.803237 AAGTTTCCTACCCGTAGATATGG 57.197 43.478 3.37 0.00 35.21 2.74
203 204 8.707796 CCCGTAGATATGGGTATGTATAGAAT 57.292 38.462 8.76 0.00 45.65 2.40
204 205 9.144298 CCCGTAGATATGGGTATGTATAGAATT 57.856 37.037 8.76 0.00 45.65 2.17
235 236 4.530710 TTGACTTAATGACTACGCAGGT 57.469 40.909 0.00 0.00 0.00 4.00
236 237 5.648178 TTGACTTAATGACTACGCAGGTA 57.352 39.130 0.00 0.00 0.00 3.08
237 238 5.847111 TGACTTAATGACTACGCAGGTAT 57.153 39.130 0.00 0.00 0.00 2.73
238 239 5.588240 TGACTTAATGACTACGCAGGTATG 58.412 41.667 0.00 0.00 0.00 2.39
239 240 5.358725 TGACTTAATGACTACGCAGGTATGA 59.641 40.000 0.00 0.00 0.00 2.15
240 241 6.127563 TGACTTAATGACTACGCAGGTATGAA 60.128 38.462 0.00 0.00 0.00 2.57
241 242 6.817184 ACTTAATGACTACGCAGGTATGAAT 58.183 36.000 0.00 0.00 0.00 2.57
242 243 7.948357 ACTTAATGACTACGCAGGTATGAATA 58.052 34.615 0.00 0.00 0.00 1.75
243 244 8.418662 ACTTAATGACTACGCAGGTATGAATAA 58.581 33.333 0.00 0.00 0.00 1.40
244 245 8.812147 TTAATGACTACGCAGGTATGAATAAG 57.188 34.615 0.00 0.00 0.00 1.73
245 246 5.196341 TGACTACGCAGGTATGAATAAGG 57.804 43.478 0.00 0.00 0.00 2.69
246 247 4.647853 TGACTACGCAGGTATGAATAAGGT 59.352 41.667 0.00 0.00 0.00 3.50
247 248 5.829391 TGACTACGCAGGTATGAATAAGGTA 59.171 40.000 0.00 0.00 0.00 3.08
248 249 6.492429 TGACTACGCAGGTATGAATAAGGTAT 59.508 38.462 0.00 0.00 0.00 2.73
249 250 7.014905 TGACTACGCAGGTATGAATAAGGTATT 59.985 37.037 0.00 0.00 0.00 1.89
250 251 7.152645 ACTACGCAGGTATGAATAAGGTATTG 58.847 38.462 0.00 0.00 0.00 1.90
251 252 4.755123 ACGCAGGTATGAATAAGGTATTGC 59.245 41.667 0.00 0.00 0.00 3.56
252 253 4.997395 CGCAGGTATGAATAAGGTATTGCT 59.003 41.667 0.00 0.00 0.00 3.91
253 254 5.470098 CGCAGGTATGAATAAGGTATTGCTT 59.530 40.000 0.00 0.00 0.00 3.91
254 255 6.017109 CGCAGGTATGAATAAGGTATTGCTTT 60.017 38.462 0.00 0.00 0.00 3.51
255 256 7.172532 CGCAGGTATGAATAAGGTATTGCTTTA 59.827 37.037 0.00 0.00 0.00 1.85
256 257 8.290325 GCAGGTATGAATAAGGTATTGCTTTAC 58.710 37.037 0.00 0.00 0.00 2.01
257 258 8.784043 CAGGTATGAATAAGGTATTGCTTTACC 58.216 37.037 7.38 7.38 41.73 2.85
258 259 7.942894 AGGTATGAATAAGGTATTGCTTTACCC 59.057 37.037 10.82 0.00 42.28 3.69
259 260 6.877611 ATGAATAAGGTATTGCTTTACCCG 57.122 37.500 10.82 0.00 42.28 5.28
260 261 5.747342 TGAATAAGGTATTGCTTTACCCGT 58.253 37.500 10.82 4.23 42.28 5.28
261 262 6.181908 TGAATAAGGTATTGCTTTACCCGTT 58.818 36.000 10.82 4.51 42.28 4.44
262 263 6.660094 TGAATAAGGTATTGCTTTACCCGTTT 59.340 34.615 10.82 3.97 42.28 3.60
263 264 6.688637 ATAAGGTATTGCTTTACCCGTTTC 57.311 37.500 10.82 0.00 42.28 2.78
264 265 4.023726 AGGTATTGCTTTACCCGTTTCA 57.976 40.909 10.82 0.00 42.28 2.69
265 266 4.595986 AGGTATTGCTTTACCCGTTTCAT 58.404 39.130 10.82 0.00 42.28 2.57
266 267 5.747342 AGGTATTGCTTTACCCGTTTCATA 58.253 37.500 10.82 0.00 42.28 2.15
267 268 5.587443 AGGTATTGCTTTACCCGTTTCATAC 59.413 40.000 10.82 0.00 42.28 2.39
268 269 4.976224 ATTGCTTTACCCGTTTCATACC 57.024 40.909 0.00 0.00 0.00 2.73
269 270 3.420300 TGCTTTACCCGTTTCATACCA 57.580 42.857 0.00 0.00 0.00 3.25
270 271 3.958018 TGCTTTACCCGTTTCATACCAT 58.042 40.909 0.00 0.00 0.00 3.55
271 272 5.100344 TGCTTTACCCGTTTCATACCATA 57.900 39.130 0.00 0.00 0.00 2.74
272 273 4.877251 TGCTTTACCCGTTTCATACCATAC 59.123 41.667 0.00 0.00 0.00 2.39
273 274 4.274214 GCTTTACCCGTTTCATACCATACC 59.726 45.833 0.00 0.00 0.00 2.73
274 275 4.420522 TTACCCGTTTCATACCATACCC 57.579 45.455 0.00 0.00 0.00 3.69
293 294 3.279875 GCGGGCGCCAAATAGGAG 61.280 66.667 30.85 9.24 41.22 3.69
294 295 2.189521 CGGGCGCCAAATAGGAGT 59.810 61.111 30.85 0.00 41.22 3.85
333 335 1.966451 CACCTCACGGGCAGTTTCC 60.966 63.158 0.00 0.00 39.10 3.13
334 336 2.359975 CCTCACGGGCAGTTTCCC 60.360 66.667 0.00 0.00 43.02 3.97
338 340 1.104577 TCACGGGCAGTTTCCCAAAC 61.105 55.000 0.00 0.00 46.92 2.93
339 341 2.190841 ACGGGCAGTTTCCCAAACG 61.191 57.895 0.00 0.00 46.92 3.60
367 374 1.338136 ACGGGCTGTGGAATAGGAGG 61.338 60.000 0.00 0.00 0.00 4.30
369 376 0.470341 GGGCTGTGGAATAGGAGGTC 59.530 60.000 0.00 0.00 0.00 3.85
391 398 1.088306 ACACCGTTTTCGTTGCTCAA 58.912 45.000 0.00 0.00 39.28 3.02
392 399 1.673920 ACACCGTTTTCGTTGCTCAAT 59.326 42.857 0.00 0.00 39.28 2.57
393 400 2.873472 ACACCGTTTTCGTTGCTCAATA 59.127 40.909 0.00 0.00 39.28 1.90
394 401 3.312973 ACACCGTTTTCGTTGCTCAATAA 59.687 39.130 0.00 0.00 39.28 1.40
395 402 4.201930 ACACCGTTTTCGTTGCTCAATAAA 60.202 37.500 0.00 0.00 39.28 1.40
396 403 4.915085 CACCGTTTTCGTTGCTCAATAAAT 59.085 37.500 0.00 0.00 42.35 1.40
397 404 5.059221 CACCGTTTTCGTTGCTCAATAAATC 59.941 40.000 0.00 0.00 42.35 2.17
398 405 4.557301 CCGTTTTCGTTGCTCAATAAATCC 59.443 41.667 0.00 0.00 42.35 3.01
399 406 4.259734 CGTTTTCGTTGCTCAATAAATCCG 59.740 41.667 0.00 0.00 38.65 4.18
400 407 5.387279 GTTTTCGTTGCTCAATAAATCCGA 58.613 37.500 0.00 0.00 0.00 4.55
401 408 4.593597 TTCGTTGCTCAATAAATCCGAC 57.406 40.909 0.00 0.00 0.00 4.79
402 409 3.857052 TCGTTGCTCAATAAATCCGACT 58.143 40.909 0.00 0.00 0.00 4.18
403 410 5.001237 TCGTTGCTCAATAAATCCGACTA 57.999 39.130 0.00 0.00 0.00 2.59
404 411 5.597806 TCGTTGCTCAATAAATCCGACTAT 58.402 37.500 0.00 0.00 0.00 2.12
405 412 5.462068 TCGTTGCTCAATAAATCCGACTATG 59.538 40.000 0.00 0.00 0.00 2.23
406 413 5.333339 CGTTGCTCAATAAATCCGACTATGG 60.333 44.000 0.00 0.00 0.00 2.74
407 414 5.290493 TGCTCAATAAATCCGACTATGGT 57.710 39.130 0.00 0.00 0.00 3.55
408 415 5.680619 TGCTCAATAAATCCGACTATGGTT 58.319 37.500 0.00 0.00 0.00 3.67
409 416 5.758296 TGCTCAATAAATCCGACTATGGTTC 59.242 40.000 0.00 0.00 0.00 3.62
410 417 5.992217 GCTCAATAAATCCGACTATGGTTCT 59.008 40.000 0.00 0.00 0.00 3.01
411 418 6.146347 GCTCAATAAATCCGACTATGGTTCTC 59.854 42.308 0.00 0.00 0.00 2.87
412 419 7.361457 TCAATAAATCCGACTATGGTTCTCT 57.639 36.000 0.00 0.00 0.00 3.10
413 420 7.434492 TCAATAAATCCGACTATGGTTCTCTC 58.566 38.462 0.00 0.00 0.00 3.20
414 421 7.287927 TCAATAAATCCGACTATGGTTCTCTCT 59.712 37.037 0.00 0.00 0.00 3.10
415 422 5.523438 AAATCCGACTATGGTTCTCTCTC 57.477 43.478 0.00 0.00 0.00 3.20
416 423 3.935818 TCCGACTATGGTTCTCTCTCT 57.064 47.619 0.00 0.00 0.00 3.10
417 424 3.811083 TCCGACTATGGTTCTCTCTCTC 58.189 50.000 0.00 0.00 0.00 3.20
418 425 3.456644 TCCGACTATGGTTCTCTCTCTCT 59.543 47.826 0.00 0.00 0.00 3.10
419 426 3.813166 CCGACTATGGTTCTCTCTCTCTC 59.187 52.174 0.00 0.00 0.00 3.20
420 427 4.444306 CCGACTATGGTTCTCTCTCTCTCT 60.444 50.000 0.00 0.00 0.00 3.10
421 428 4.750098 CGACTATGGTTCTCTCTCTCTCTC 59.250 50.000 0.00 0.00 0.00 3.20
422 429 5.453339 CGACTATGGTTCTCTCTCTCTCTCT 60.453 48.000 0.00 0.00 0.00 3.10
423 430 5.930135 ACTATGGTTCTCTCTCTCTCTCTC 58.070 45.833 0.00 0.00 0.00 3.20
424 431 4.860802 ATGGTTCTCTCTCTCTCTCTCA 57.139 45.455 0.00 0.00 0.00 3.27
425 432 4.649267 TGGTTCTCTCTCTCTCTCTCAA 57.351 45.455 0.00 0.00 0.00 3.02
426 433 4.991776 TGGTTCTCTCTCTCTCTCTCAAA 58.008 43.478 0.00 0.00 0.00 2.69
427 434 5.389520 TGGTTCTCTCTCTCTCTCTCAAAA 58.610 41.667 0.00 0.00 0.00 2.44
428 435 5.835819 TGGTTCTCTCTCTCTCTCTCAAAAA 59.164 40.000 0.00 0.00 0.00 1.94
459 466 1.376543 TCCGACTATGGACGTGACTC 58.623 55.000 0.00 0.00 31.53 3.36
460 467 1.065636 TCCGACTATGGACGTGACTCT 60.066 52.381 0.00 0.00 31.53 3.24
473 480 3.253677 ACGTGACTCTCTCTCAACGAATT 59.746 43.478 0.00 0.00 0.00 2.17
490 497 1.752501 ATTCCGATTTGACGCGCTCG 61.753 55.000 5.73 6.67 42.43 5.03
532 539 0.250553 CGCCCCGCCTCCATTAAATA 60.251 55.000 0.00 0.00 0.00 1.40
555 572 2.124109 GGCAGGGCCTTAGGAAGC 60.124 66.667 1.32 2.25 46.69 3.86
556 573 2.684499 GGCAGGGCCTTAGGAAGCT 61.684 63.158 1.32 0.00 46.69 3.74
558 575 1.529309 CAGGGCCTTAGGAAGCTCC 59.471 63.158 1.32 0.00 36.58 4.70
559 576 1.082954 AGGGCCTTAGGAAGCTCCA 59.917 57.895 0.00 0.00 39.61 3.86
560 577 1.224870 GGGCCTTAGGAAGCTCCAC 59.775 63.158 0.69 0.00 39.61 4.02
561 578 1.562672 GGGCCTTAGGAAGCTCCACA 61.563 60.000 0.69 0.00 39.61 4.17
616 633 1.209275 GAATCAGATCGGCGACACGG 61.209 60.000 13.76 10.70 0.00 4.94
617 634 1.945354 AATCAGATCGGCGACACGGT 61.945 55.000 13.76 0.00 0.00 4.83
618 635 2.337749 ATCAGATCGGCGACACGGTC 62.338 60.000 13.76 5.36 44.02 4.79
619 636 3.823330 AGATCGGCGACACGGTCC 61.823 66.667 13.76 0.00 44.74 4.46
620 637 4.867599 GATCGGCGACACGGTCCC 62.868 72.222 13.76 0.00 38.01 4.46
769 792 2.722201 AAGGATCAGACGGTCCGCC 61.722 63.158 12.28 0.00 39.54 6.13
839 862 1.529948 TGTCAGTCCCTCCGTCGTT 60.530 57.895 0.00 0.00 0.00 3.85
853 876 2.825836 CGTTGCCCAGCCAGGATC 60.826 66.667 0.00 0.00 41.22 3.36
937 960 4.039357 CGTCGTCGACCCAGCTGT 62.039 66.667 19.29 0.00 39.71 4.40
975 1100 4.778415 CAGACGGTCGGCTCGGTG 62.778 72.222 1.89 0.00 0.00 4.94
1048 1176 2.168728 GCCAGTTCCTCGAAATCTAGGT 59.831 50.000 1.41 0.00 34.30 3.08
1188 1316 8.782533 ATAACGAAATCAGAAAACTGAACAAC 57.217 30.769 4.09 0.00 36.88 3.32
1348 1478 5.794687 TCGCAACAAGTATTATCAGGTTG 57.205 39.130 0.00 0.00 38.80 3.77
1350 1480 4.634004 CGCAACAAGTATTATCAGGTTGGA 59.366 41.667 0.00 0.00 36.89 3.53
1361 1491 3.491766 TCAGGTTGGATTCCTAGTCCT 57.508 47.619 3.95 3.89 36.68 3.85
1362 1492 3.107601 TCAGGTTGGATTCCTAGTCCTG 58.892 50.000 19.78 19.78 41.30 3.86
1370 1500 3.307339 GGATTCCTAGTCCTGCCATCATC 60.307 52.174 0.00 0.00 32.85 2.92
1371 1501 2.783379 TCCTAGTCCTGCCATCATCT 57.217 50.000 0.00 0.00 0.00 2.90
1375 1505 3.118112 CCTAGTCCTGCCATCATCTTGTT 60.118 47.826 0.00 0.00 0.00 2.83
1376 1506 4.101585 CCTAGTCCTGCCATCATCTTGTTA 59.898 45.833 0.00 0.00 0.00 2.41
1386 1676 9.333724 CTGCCATCATCTTGTTATATATATGCA 57.666 33.333 5.44 0.00 0.00 3.96
1389 1679 9.557061 CCATCATCTTGTTATATATATGCAGCT 57.443 33.333 5.44 0.00 0.00 4.24
1656 1946 2.798847 GGTCCCTCGAAATTATGTACGC 59.201 50.000 0.00 0.00 0.00 4.42
1740 2036 3.817647 AGCCAGTTTTTAAGCTCAGACAG 59.182 43.478 0.00 0.00 0.00 3.51
1785 2096 5.869753 AATCTTTATATGGCGATGCAGTC 57.130 39.130 0.00 0.00 0.00 3.51
1827 2193 4.138290 TGAAAAGGCCGTTTCAGTATTCA 58.862 39.130 34.08 16.97 41.45 2.57
1935 2301 5.530915 TGTTACCTTGAATGAAGTGTTCCAG 59.469 40.000 0.00 0.00 0.00 3.86
1974 2409 8.762426 GTTTTATAGGCCAGAAAGTAATACTCG 58.238 37.037 5.01 0.00 0.00 4.18
1981 2416 6.093633 GGCCAGAAAGTAATACTCGTGAATTT 59.906 38.462 0.00 0.00 0.00 1.82
1982 2417 7.279313 GGCCAGAAAGTAATACTCGTGAATTTA 59.721 37.037 0.00 0.00 0.00 1.40
2146 2651 9.813826 ATTATTTCCTTTAGATGACCTTATGGG 57.186 33.333 0.00 0.00 41.89 4.00
2506 3094 8.619146 TTATGGTAAGTACGTCGATACAAAAG 57.381 34.615 0.00 0.00 0.00 2.27
2601 3225 4.570719 GGGGAAAGATTTTGACCAGAGGAT 60.571 45.833 0.00 0.00 0.00 3.24
2677 3301 2.921754 CCTTTTCTGGCTTCTACGTACG 59.078 50.000 15.01 15.01 0.00 3.67
2678 3302 3.572584 CTTTTCTGGCTTCTACGTACGT 58.427 45.455 25.98 25.98 0.00 3.57
2679 3303 4.379813 CCTTTTCTGGCTTCTACGTACGTA 60.380 45.833 25.41 25.41 0.00 3.57
2680 3304 4.970662 TTTCTGGCTTCTACGTACGTAT 57.029 40.909 26.98 6.08 0.00 3.06
2834 3458 3.252458 ACGAGATTTGGCAAAGGTACAAC 59.748 43.478 18.61 4.80 0.00 3.32
2875 3514 3.559238 ACCAAGCAACGATTGAATGAC 57.441 42.857 0.00 0.00 29.71 3.06
2886 3525 9.031360 GCAACGATTGAATGACTATAACTCTTA 57.969 33.333 0.00 0.00 0.00 2.10
2906 3545 7.172532 ACTCTTATGTTTTGACGCTTTGTGATA 59.827 33.333 0.00 0.00 0.00 2.15
2958 3597 6.740411 AACAGAAGAAATTCAGAGATGCTC 57.260 37.500 0.00 0.00 0.00 4.26
3007 3646 4.759516 TTCCATTACGCCAAGAAAGAAC 57.240 40.909 0.00 0.00 0.00 3.01
3018 3657 2.440539 AGAAAGAACGAGACGTGCAT 57.559 45.000 0.00 0.00 39.99 3.96
3244 3887 5.757320 CCATGTTTGGATGCAAAGTGTTTTA 59.243 36.000 13.15 0.00 46.92 1.52
3245 3888 6.427547 CCATGTTTGGATGCAAAGTGTTTTAT 59.572 34.615 13.15 0.00 46.92 1.40
3246 3889 7.601886 CCATGTTTGGATGCAAAGTGTTTTATA 59.398 33.333 13.15 0.00 46.92 0.98
3247 3890 7.938563 TGTTTGGATGCAAAGTGTTTTATAC 57.061 32.000 13.15 0.00 0.00 1.47
3248 3891 7.721402 TGTTTGGATGCAAAGTGTTTTATACT 58.279 30.769 13.15 0.00 0.00 2.12
3249 3892 8.851145 TGTTTGGATGCAAAGTGTTTTATACTA 58.149 29.630 13.15 0.00 0.00 1.82
3250 3893 9.124807 GTTTGGATGCAAAGTGTTTTATACTAC 57.875 33.333 13.15 0.00 0.00 2.73
3251 3894 7.385778 TGGATGCAAAGTGTTTTATACTACC 57.614 36.000 0.00 0.00 0.00 3.18
3252 3895 7.172342 TGGATGCAAAGTGTTTTATACTACCT 58.828 34.615 0.00 0.00 0.00 3.08
3253 3896 7.335924 TGGATGCAAAGTGTTTTATACTACCTC 59.664 37.037 0.00 0.00 0.00 3.85
3254 3897 7.201705 GGATGCAAAGTGTTTTATACTACCTCC 60.202 40.741 0.00 0.00 0.00 4.30
3255 3898 5.640357 TGCAAAGTGTTTTATACTACCTCCG 59.360 40.000 0.00 0.00 0.00 4.63
3256 3899 5.640783 GCAAAGTGTTTTATACTACCTCCGT 59.359 40.000 0.00 0.00 0.00 4.69
3257 3900 6.183360 GCAAAGTGTTTTATACTACCTCCGTC 60.183 42.308 0.00 0.00 0.00 4.79
3258 3901 5.588958 AGTGTTTTATACTACCTCCGTCC 57.411 43.478 0.00 0.00 0.00 4.79
3259 3902 4.403752 AGTGTTTTATACTACCTCCGTCCC 59.596 45.833 0.00 0.00 0.00 4.46
3260 3903 4.160252 GTGTTTTATACTACCTCCGTCCCA 59.840 45.833 0.00 0.00 0.00 4.37
3261 3904 4.964262 TGTTTTATACTACCTCCGTCCCAT 59.036 41.667 0.00 0.00 0.00 4.00
3262 3905 6.040842 GTGTTTTATACTACCTCCGTCCCATA 59.959 42.308 0.00 0.00 0.00 2.74
3263 3906 6.610830 TGTTTTATACTACCTCCGTCCCATAA 59.389 38.462 0.00 0.00 0.00 1.90
3264 3907 7.290714 TGTTTTATACTACCTCCGTCCCATAAT 59.709 37.037 0.00 0.00 0.00 1.28
3265 3908 6.845758 TTATACTACCTCCGTCCCATAATG 57.154 41.667 0.00 0.00 0.00 1.90
3266 3909 3.042059 ACTACCTCCGTCCCATAATGT 57.958 47.619 0.00 0.00 0.00 2.71
3267 3910 4.188937 ACTACCTCCGTCCCATAATGTA 57.811 45.455 0.00 0.00 0.00 2.29
3268 3911 4.549668 ACTACCTCCGTCCCATAATGTAA 58.450 43.478 0.00 0.00 0.00 2.41
3269 3912 4.587684 ACTACCTCCGTCCCATAATGTAAG 59.412 45.833 0.00 0.00 0.00 2.34
3270 3913 3.649843 ACCTCCGTCCCATAATGTAAGA 58.350 45.455 0.00 0.00 0.00 2.10
3271 3914 3.387050 ACCTCCGTCCCATAATGTAAGAC 59.613 47.826 0.00 0.00 0.00 3.01
3273 3916 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3274 3917 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3275 3918 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3276 3919 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3277 3920 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3322 3965 5.623956 AATGTCTTACATTATGGGACGGA 57.376 39.130 3.51 0.00 46.11 4.69
3323 3966 4.665833 TGTCTTACATTATGGGACGGAG 57.334 45.455 0.00 0.00 0.00 4.63
3324 3967 3.386726 TGTCTTACATTATGGGACGGAGG 59.613 47.826 0.00 0.00 0.00 4.30
3325 3968 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3326 3969 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3327 3970 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3328 3971 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
3329 3972 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
3330 3973 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
3331 3974 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
3332 3975 0.338814 ATGGGACGGAGGGAGTAGTT 59.661 55.000 0.00 0.00 0.00 2.24
3333 3976 0.115745 TGGGACGGAGGGAGTAGTTT 59.884 55.000 0.00 0.00 0.00 2.66
3334 3977 1.273759 GGGACGGAGGGAGTAGTTTT 58.726 55.000 0.00 0.00 0.00 2.43
3585 4374 7.045416 GGGAGTTAACCAAACAATTGTCTTTT 58.955 34.615 12.39 0.00 40.83 2.27
3586 4375 7.223971 GGGAGTTAACCAAACAATTGTCTTTTC 59.776 37.037 12.39 1.20 40.83 2.29
3784 4590 4.638421 CGGCATCCAAACAAAACCTAGATA 59.362 41.667 0.00 0.00 0.00 1.98
3804 4610 5.817816 AGATAGAAACCATCGGAACATTGTC 59.182 40.000 0.00 0.00 0.00 3.18
3822 4628 6.933521 ACATTGTCCTTGTATCTGATGCTATC 59.066 38.462 7.26 0.00 0.00 2.08
3829 4635 4.482990 TGTATCTGATGCTATCCCTGACA 58.517 43.478 7.26 0.00 0.00 3.58
3917 4723 9.096160 GCACTTAGAAAGGAGGTACTTTATTAC 57.904 37.037 0.00 0.00 41.55 1.89
3931 4737 6.569179 ACTTTATTACAAAACTGCATCCGT 57.431 33.333 0.00 0.00 0.00 4.69
4075 4892 4.505039 GGATTAATTCCCAGCATACCGTCT 60.505 45.833 0.00 0.00 38.75 4.18
4076 4893 4.497291 TTAATTCCCAGCATACCGTCTT 57.503 40.909 0.00 0.00 0.00 3.01
4077 4894 5.617528 TTAATTCCCAGCATACCGTCTTA 57.382 39.130 0.00 0.00 0.00 2.10
4078 4895 4.497291 AATTCCCAGCATACCGTCTTAA 57.503 40.909 0.00 0.00 0.00 1.85
4088 4905 7.148306 CCAGCATACCGTCTTAATTAACTGTTT 60.148 37.037 0.00 0.00 0.00 2.83
4104 4921 6.727824 AACTGTTTATCTTCCTGATTCACG 57.272 37.500 0.00 0.00 36.65 4.35
4119 4942 5.398169 TGATTCACGCCATTTCATTTGTAC 58.602 37.500 0.00 0.00 0.00 2.90
4142 4965 4.308526 CAGCCTAACTGCCACCTG 57.691 61.111 0.00 0.00 40.19 4.00
4143 4966 2.042831 CAGCCTAACTGCCACCTGC 61.043 63.158 0.00 0.00 40.19 4.85
4144 4967 3.127533 GCCTAACTGCCACCTGCG 61.128 66.667 0.00 0.00 45.60 5.18
4145 4968 2.662596 CCTAACTGCCACCTGCGA 59.337 61.111 0.00 0.00 45.60 5.10
4146 4969 1.003839 CCTAACTGCCACCTGCGAA 60.004 57.895 0.00 0.00 45.60 4.70
4169 5032 6.252599 AGCACATGTAGAATTCAGGGAATA 57.747 37.500 8.44 0.00 31.46 1.75
4178 5041 9.998106 TGTAGAATTCAGGGAATATAACTTAGC 57.002 33.333 8.44 0.00 31.46 3.09
4214 5077 5.806654 TTTCATTCTTCCCTTCTTTTGGG 57.193 39.130 0.00 0.00 45.90 4.12
4232 5095 8.002459 TCTTTTGGGGATTACACTTTCTTAGTT 58.998 33.333 0.00 0.00 33.85 2.24
4421 6306 4.808558 TCAAAATAAATGCTCACTGGCAC 58.191 39.130 0.00 0.00 45.36 5.01
4423 6308 2.814805 ATAAATGCTCACTGGCACCT 57.185 45.000 0.00 0.00 45.36 4.00
4449 6334 6.647212 TCTCTAAAAATGCGTAGTCATGTG 57.353 37.500 0.00 0.00 0.00 3.21
4451 6336 6.649141 TCTCTAAAAATGCGTAGTCATGTGTT 59.351 34.615 0.00 0.00 0.00 3.32
4453 6338 8.487313 TCTAAAAATGCGTAGTCATGTGTTAT 57.513 30.769 0.00 0.00 0.00 1.89
4454 6339 9.589111 TCTAAAAATGCGTAGTCATGTGTTATA 57.411 29.630 0.00 0.00 0.00 0.98
4474 6359 1.472480 ACTTAAATGTGGATGGCGTGC 59.528 47.619 0.00 0.00 0.00 5.34
4476 6361 1.539157 TAAATGTGGATGGCGTGCAA 58.461 45.000 1.28 0.00 0.00 4.08
4481 6366 0.179156 GTGGATGGCGTGCAAGAATG 60.179 55.000 1.28 0.00 0.00 2.67
4482 6367 0.608856 TGGATGGCGTGCAAGAATGT 60.609 50.000 2.99 0.00 0.00 2.71
4527 6412 2.376808 AAGGAGCTCAATGACACGAG 57.623 50.000 17.19 0.24 0.00 4.18
4545 6430 4.963953 CACGAGTGTGTTTTCATCTCAAAC 59.036 41.667 0.00 0.00 41.34 2.93
4554 6439 9.299963 TGTGTTTTCATCTCAAACAAACTATTG 57.700 29.630 0.00 0.00 43.89 1.90
4570 6455 8.641499 CAAACTATTGTTAAAGCAAAACCAGA 57.359 30.769 0.00 0.00 34.96 3.86
4583 6468 4.338879 CAAAACCAGACCATTCTCTCCAT 58.661 43.478 0.00 0.00 0.00 3.41
4622 6507 3.515330 CGAAACACGGTCCTAAGGTAT 57.485 47.619 0.00 0.00 38.46 2.73
4636 6521 7.362747 GGTCCTAAGGTATACTATCCATGTTCG 60.363 44.444 2.25 0.00 0.00 3.95
4640 6525 5.967088 AGGTATACTATCCATGTTCGCATC 58.033 41.667 2.25 0.00 35.23 3.91
4642 6527 2.154854 ACTATCCATGTTCGCATCCG 57.845 50.000 0.00 0.00 35.23 4.18
4661 6546 5.682943 TCCGTTATTTCAACAACAGAAGG 57.317 39.130 0.00 0.00 0.00 3.46
4679 6570 4.665009 AGAAGGGGTGGCATTCATAATCTA 59.335 41.667 0.00 0.00 0.00 1.98
4689 6580 4.757149 GCATTCATAATCTACCCTGTGGAC 59.243 45.833 0.00 0.00 34.81 4.02
4690 6581 4.665833 TTCATAATCTACCCTGTGGACG 57.334 45.455 0.00 0.00 34.81 4.79
4692 6583 4.480115 TCATAATCTACCCTGTGGACGAT 58.520 43.478 0.00 0.00 34.81 3.73
4708 6600 3.862267 GGACGATGAGATTGTCAGTTCTG 59.138 47.826 6.34 0.00 43.98 3.02
4722 6614 4.566759 GTCAGTTCTGCGATTGCTATACAA 59.433 41.667 6.47 0.00 44.01 2.41
4779 6671 4.921470 ATACTCACATTTCAAACGTCGG 57.079 40.909 0.00 0.00 0.00 4.79
4780 6672 2.828877 ACTCACATTTCAAACGTCGGA 58.171 42.857 0.00 0.00 0.00 4.55
4784 6687 3.374367 TCACATTTCAAACGTCGGAACAA 59.626 39.130 0.00 0.00 0.00 2.83
4797 6700 8.761575 AACGTCGGAACAACTTATCTTTATAA 57.238 30.769 0.00 0.00 0.00 0.98
4833 8087 2.486203 TGACGGTTTCCATACATTGCAC 59.514 45.455 0.00 0.00 0.00 4.57
4834 8088 2.747446 GACGGTTTCCATACATTGCACT 59.253 45.455 0.00 0.00 0.00 4.40
4884 8138 3.891366 CAGCCCCTTGGGTTCTATAAATG 59.109 47.826 4.84 0.00 46.51 2.32
4886 8140 4.231890 AGCCCCTTGGGTTCTATAAATGAA 59.768 41.667 4.84 0.00 46.51 2.57
4925 8198 1.462616 TTCAAATGTGGAGGCGATGG 58.537 50.000 0.00 0.00 0.00 3.51
4927 8200 1.001020 AAATGTGGAGGCGATGGCA 60.001 52.632 1.01 0.00 42.47 4.92
4987 8266 7.274033 CACTGTTACATCCAAGTTGCATATTTG 59.726 37.037 0.00 0.00 0.00 2.32
4988 8267 7.176515 ACTGTTACATCCAAGTTGCATATTTGA 59.823 33.333 0.00 0.00 0.00 2.69
4989 8268 7.312154 TGTTACATCCAAGTTGCATATTTGAC 58.688 34.615 0.00 0.00 0.00 3.18
4990 8269 4.985413 ACATCCAAGTTGCATATTTGACG 58.015 39.130 0.00 0.00 0.00 4.35
4991 8270 3.485947 TCCAAGTTGCATATTTGACGC 57.514 42.857 0.00 0.00 0.00 5.19
4992 8271 2.159585 TCCAAGTTGCATATTTGACGCG 60.160 45.455 3.53 3.53 0.00 6.01
4993 8272 2.176369 CAAGTTGCATATTTGACGCGG 58.824 47.619 12.47 0.00 0.00 6.46
4994 8273 0.098728 AGTTGCATATTTGACGCGGC 59.901 50.000 12.47 8.67 0.00 6.53
4995 8274 0.179176 GTTGCATATTTGACGCGGCA 60.179 50.000 12.71 12.71 0.00 5.69
4996 8275 0.523519 TTGCATATTTGACGCGGCAA 59.476 45.000 26.47 26.47 38.75 4.52
4997 8276 0.179176 TGCATATTTGACGCGGCAAC 60.179 50.000 30.34 16.55 0.00 4.17
4998 8277 0.179176 GCATATTTGACGCGGCAACA 60.179 50.000 30.34 19.24 0.00 3.33
4999 8278 1.813896 CATATTTGACGCGGCAACAG 58.186 50.000 30.34 13.67 0.00 3.16
5000 8279 0.098728 ATATTTGACGCGGCAACAGC 59.901 50.000 30.34 0.00 0.00 4.40
5001 8280 0.953471 TATTTGACGCGGCAACAGCT 60.953 50.000 30.34 14.89 34.62 4.24
5002 8281 2.462255 ATTTGACGCGGCAACAGCTG 62.462 55.000 30.34 13.48 37.70 4.24
5003 8282 4.600576 TGACGCGGCAACAGCTGA 62.601 61.111 23.35 0.00 36.76 4.26
5004 8283 3.345808 GACGCGGCAACAGCTGAA 61.346 61.111 23.35 0.00 36.76 3.02
5005 8284 3.300667 GACGCGGCAACAGCTGAAG 62.301 63.158 23.35 13.22 36.76 3.02
5006 8285 4.748679 CGCGGCAACAGCTGAAGC 62.749 66.667 23.35 22.12 36.76 3.86
5018 8297 0.165511 GCTGAAGCTCAAGCAGTTCG 59.834 55.000 14.11 0.00 45.16 3.95
5019 8298 1.788258 CTGAAGCTCAAGCAGTTCGA 58.212 50.000 4.59 0.00 45.16 3.71
5020 8299 1.725706 CTGAAGCTCAAGCAGTTCGAG 59.274 52.381 4.59 0.00 45.16 4.04
5021 8300 1.341209 TGAAGCTCAAGCAGTTCGAGA 59.659 47.619 4.59 0.00 45.16 4.04
5022 8301 2.028658 TGAAGCTCAAGCAGTTCGAGAT 60.029 45.455 4.59 0.00 45.16 2.75
5023 8302 2.007360 AGCTCAAGCAGTTCGAGATG 57.993 50.000 4.59 0.00 45.16 2.90
5024 8303 1.005340 GCTCAAGCAGTTCGAGATGG 58.995 55.000 0.00 0.00 41.59 3.51
5025 8304 1.674221 GCTCAAGCAGTTCGAGATGGT 60.674 52.381 0.00 0.00 41.59 3.55
5026 8305 2.417379 GCTCAAGCAGTTCGAGATGGTA 60.417 50.000 4.36 0.00 41.59 3.25
5027 8306 3.739519 GCTCAAGCAGTTCGAGATGGTAT 60.740 47.826 4.36 0.00 41.59 2.73
5028 8307 4.437239 CTCAAGCAGTTCGAGATGGTATT 58.563 43.478 4.36 0.00 0.00 1.89
5029 8308 4.433615 TCAAGCAGTTCGAGATGGTATTC 58.566 43.478 4.36 0.00 0.00 1.75
5030 8309 4.081697 TCAAGCAGTTCGAGATGGTATTCA 60.082 41.667 4.36 0.00 0.00 2.57
5031 8310 4.679373 AGCAGTTCGAGATGGTATTCAT 57.321 40.909 2.22 0.00 39.13 2.57
5045 8324 8.882415 GATGGTATTCATCTTGCAAATCAAAT 57.118 30.769 0.00 1.62 46.59 2.32
5046 8325 9.970395 GATGGTATTCATCTTGCAAATCAAATA 57.030 29.630 0.00 0.67 46.59 1.40
5047 8326 9.976511 ATGGTATTCATCTTGCAAATCAAATAG 57.023 29.630 0.00 0.00 33.65 1.73
5048 8327 8.415553 TGGTATTCATCTTGCAAATCAAATAGG 58.584 33.333 0.00 0.00 33.65 2.57
5049 8328 7.383300 GGTATTCATCTTGCAAATCAAATAGGC 59.617 37.037 0.00 0.00 33.65 3.93
5050 8329 6.534475 TTCATCTTGCAAATCAAATAGGCT 57.466 33.333 0.00 0.00 33.65 4.58
5051 8330 5.898174 TCATCTTGCAAATCAAATAGGCTG 58.102 37.500 0.00 0.00 33.65 4.85
5052 8331 5.419788 TCATCTTGCAAATCAAATAGGCTGT 59.580 36.000 0.00 0.00 33.65 4.40
5053 8332 5.314923 TCTTGCAAATCAAATAGGCTGTC 57.685 39.130 0.00 0.00 33.65 3.51
5054 8333 4.766373 TCTTGCAAATCAAATAGGCTGTCA 59.234 37.500 0.00 0.00 33.65 3.58
5055 8334 4.707030 TGCAAATCAAATAGGCTGTCAG 57.293 40.909 0.00 0.00 0.00 3.51
5056 8335 4.334552 TGCAAATCAAATAGGCTGTCAGA 58.665 39.130 3.32 0.00 0.00 3.27
5057 8336 4.766373 TGCAAATCAAATAGGCTGTCAGAA 59.234 37.500 3.32 0.00 0.00 3.02
5058 8337 5.243507 TGCAAATCAAATAGGCTGTCAGAAA 59.756 36.000 3.32 0.00 0.00 2.52
5059 8338 6.071221 TGCAAATCAAATAGGCTGTCAGAAAT 60.071 34.615 3.32 0.00 0.00 2.17
5060 8339 6.815142 GCAAATCAAATAGGCTGTCAGAAATT 59.185 34.615 3.32 0.00 0.00 1.82
5061 8340 7.975616 GCAAATCAAATAGGCTGTCAGAAATTA 59.024 33.333 3.32 0.00 0.00 1.40
5062 8341 9.512435 CAAATCAAATAGGCTGTCAGAAATTAG 57.488 33.333 3.32 0.00 0.00 1.73
5063 8342 8.814038 AATCAAATAGGCTGTCAGAAATTAGT 57.186 30.769 3.32 0.00 0.00 2.24
5064 8343 8.814038 ATCAAATAGGCTGTCAGAAATTAGTT 57.186 30.769 3.32 0.00 0.00 2.24
5065 8344 9.905713 ATCAAATAGGCTGTCAGAAATTAGTTA 57.094 29.630 3.32 0.00 0.00 2.24
5066 8345 9.905713 TCAAATAGGCTGTCAGAAATTAGTTAT 57.094 29.630 3.32 0.00 0.00 1.89
5069 8348 9.905713 AATAGGCTGTCAGAAATTAGTTATTCA 57.094 29.630 3.32 0.00 0.00 2.57
5070 8349 7.856145 AGGCTGTCAGAAATTAGTTATTCAG 57.144 36.000 3.32 0.00 0.00 3.02
5071 8350 7.398024 AGGCTGTCAGAAATTAGTTATTCAGT 58.602 34.615 3.32 0.00 0.00 3.41
5072 8351 7.550906 AGGCTGTCAGAAATTAGTTATTCAGTC 59.449 37.037 3.32 0.00 0.00 3.51
5073 8352 7.550906 GGCTGTCAGAAATTAGTTATTCAGTCT 59.449 37.037 3.32 0.00 0.00 3.24
5074 8353 8.386606 GCTGTCAGAAATTAGTTATTCAGTCTG 58.613 37.037 3.32 0.00 33.08 3.51
5075 8354 9.645059 CTGTCAGAAATTAGTTATTCAGTCTGA 57.355 33.333 0.00 0.00 36.21 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.599866 CAACTGGATAACAAATAGATGAGTACA 57.400 33.333 0.00 0.00 0.00 2.90
17 18 9.046296 CCAACTGGATAACAAATAGATGAGTAC 57.954 37.037 0.00 0.00 37.39 2.73
18 19 8.210946 CCCAACTGGATAACAAATAGATGAGTA 58.789 37.037 0.00 0.00 37.39 2.59
19 20 7.056635 CCCAACTGGATAACAAATAGATGAGT 58.943 38.462 0.00 0.00 37.39 3.41
20 21 7.282585 TCCCAACTGGATAACAAATAGATGAG 58.717 38.462 0.00 0.00 38.61 2.90
21 22 7.206789 TCCCAACTGGATAACAAATAGATGA 57.793 36.000 0.00 0.00 38.61 2.92
36 37 8.748412 TGACAAAAAGATATTTATCCCAACTGG 58.252 33.333 0.00 0.00 33.17 4.00
51 52 9.726232 CATCGATATCACATTTGACAAAAAGAT 57.274 29.630 4.41 10.58 33.38 2.40
52 53 8.945057 TCATCGATATCACATTTGACAAAAAGA 58.055 29.630 4.41 3.99 33.38 2.52
53 54 9.558648 TTCATCGATATCACATTTGACAAAAAG 57.441 29.630 4.41 3.62 33.38 2.27
55 56 9.505995 CATTCATCGATATCACATTTGACAAAA 57.494 29.630 4.41 0.00 33.38 2.44
56 57 8.676401 ACATTCATCGATATCACATTTGACAAA 58.324 29.630 2.48 2.48 33.38 2.83
57 58 8.212317 ACATTCATCGATATCACATTTGACAA 57.788 30.769 0.00 0.00 33.38 3.18
58 59 7.790823 ACATTCATCGATATCACATTTGACA 57.209 32.000 0.00 0.00 33.38 3.58
92 93 8.780249 GGTACATCAAACACTACACAAGTTATT 58.220 33.333 0.00 0.00 35.76 1.40
93 94 7.389607 GGGTACATCAAACACTACACAAGTTAT 59.610 37.037 0.00 0.00 35.76 1.89
94 95 6.707161 GGGTACATCAAACACTACACAAGTTA 59.293 38.462 0.00 0.00 35.76 2.24
95 96 5.529800 GGGTACATCAAACACTACACAAGTT 59.470 40.000 0.00 0.00 35.76 2.66
96 97 5.061179 GGGTACATCAAACACTACACAAGT 58.939 41.667 0.00 0.00 39.81 3.16
97 98 4.151689 CGGGTACATCAAACACTACACAAG 59.848 45.833 0.00 0.00 0.00 3.16
98 99 4.059511 CGGGTACATCAAACACTACACAA 58.940 43.478 0.00 0.00 0.00 3.33
99 100 3.069872 ACGGGTACATCAAACACTACACA 59.930 43.478 0.00 0.00 0.00 3.72
100 101 3.656559 ACGGGTACATCAAACACTACAC 58.343 45.455 0.00 0.00 0.00 2.90
101 102 4.059511 CAACGGGTACATCAAACACTACA 58.940 43.478 0.00 0.00 0.00 2.74
102 103 3.434299 CCAACGGGTACATCAAACACTAC 59.566 47.826 0.00 0.00 0.00 2.73
103 104 3.557475 CCCAACGGGTACATCAAACACTA 60.557 47.826 0.00 0.00 38.25 2.74
104 105 2.500229 CCAACGGGTACATCAAACACT 58.500 47.619 0.00 0.00 0.00 3.55
105 106 1.538075 CCCAACGGGTACATCAAACAC 59.462 52.381 0.00 0.00 38.25 3.32
106 107 1.898902 CCCAACGGGTACATCAAACA 58.101 50.000 0.00 0.00 38.25 2.83
148 149 2.561478 TACCTATACCCGTACCCGAC 57.439 55.000 0.00 0.00 35.63 4.79
149 150 3.117663 ACTTTACCTATACCCGTACCCGA 60.118 47.826 0.00 0.00 35.63 5.14
150 151 3.222603 ACTTTACCTATACCCGTACCCG 58.777 50.000 0.00 0.00 0.00 5.28
151 152 5.453339 GGAAACTTTACCTATACCCGTACCC 60.453 48.000 0.00 0.00 0.00 3.69
152 153 5.363868 AGGAAACTTTACCTATACCCGTACC 59.636 44.000 0.00 0.00 37.44 3.34
153 154 6.471233 AGGAAACTTTACCTATACCCGTAC 57.529 41.667 0.00 0.00 37.44 3.67
154 155 6.549736 GGTAGGAAACTTTACCTATACCCGTA 59.450 42.308 0.00 0.00 43.67 4.02
155 156 5.363868 GGTAGGAAACTTTACCTATACCCGT 59.636 44.000 0.00 0.00 43.67 5.28
156 157 5.221521 GGGTAGGAAACTTTACCTATACCCG 60.222 48.000 0.00 0.00 41.95 5.28
157 158 5.221521 CGGGTAGGAAACTTTACCTATACCC 60.222 48.000 11.91 11.91 45.01 3.69
158 159 5.363868 ACGGGTAGGAAACTTTACCTATACC 59.636 44.000 0.00 0.00 43.67 2.73
159 160 6.471233 ACGGGTAGGAAACTTTACCTATAC 57.529 41.667 0.00 0.00 43.67 1.47
160 161 7.582719 TCTACGGGTAGGAAACTTTACCTATA 58.417 38.462 6.04 0.00 43.67 1.31
161 162 6.435164 TCTACGGGTAGGAAACTTTACCTAT 58.565 40.000 6.04 0.00 43.67 2.57
162 163 5.826643 TCTACGGGTAGGAAACTTTACCTA 58.173 41.667 6.04 0.00 43.67 3.08
163 164 4.677182 TCTACGGGTAGGAAACTTTACCT 58.323 43.478 6.04 0.00 43.67 3.08
164 165 5.604758 ATCTACGGGTAGGAAACTTTACC 57.395 43.478 6.04 0.00 43.67 2.85
165 166 7.150640 CCATATCTACGGGTAGGAAACTTTAC 58.849 42.308 6.04 0.00 43.67 2.01
166 167 6.268387 CCCATATCTACGGGTAGGAAACTTTA 59.732 42.308 6.04 0.00 35.59 1.85
167 168 5.071384 CCCATATCTACGGGTAGGAAACTTT 59.929 44.000 6.04 0.00 35.59 2.66
168 169 4.591924 CCCATATCTACGGGTAGGAAACTT 59.408 45.833 6.04 0.00 35.59 2.66
169 170 4.158015 CCCATATCTACGGGTAGGAAACT 58.842 47.826 6.04 0.00 37.70 2.66
170 171 4.532314 CCCATATCTACGGGTAGGAAAC 57.468 50.000 6.04 0.00 37.70 2.78
212 213 4.870426 ACCTGCGTAGTCATTAAGTCAATG 59.130 41.667 0.00 0.00 44.69 2.82
213 214 5.086104 ACCTGCGTAGTCATTAAGTCAAT 57.914 39.130 0.00 0.00 0.00 2.57
214 215 4.530710 ACCTGCGTAGTCATTAAGTCAA 57.469 40.909 0.00 0.00 0.00 3.18
215 216 5.358725 TCATACCTGCGTAGTCATTAAGTCA 59.641 40.000 0.00 0.00 0.00 3.41
216 217 5.828747 TCATACCTGCGTAGTCATTAAGTC 58.171 41.667 0.00 0.00 0.00 3.01
217 218 5.847111 TCATACCTGCGTAGTCATTAAGT 57.153 39.130 0.00 0.00 0.00 2.24
218 219 8.812147 TTATTCATACCTGCGTAGTCATTAAG 57.188 34.615 0.00 0.00 0.00 1.85
219 220 7.870954 CCTTATTCATACCTGCGTAGTCATTAA 59.129 37.037 0.00 0.00 0.00 1.40
220 221 7.014905 ACCTTATTCATACCTGCGTAGTCATTA 59.985 37.037 0.00 0.00 0.00 1.90
221 222 6.183360 ACCTTATTCATACCTGCGTAGTCATT 60.183 38.462 0.00 0.00 0.00 2.57
222 223 5.304614 ACCTTATTCATACCTGCGTAGTCAT 59.695 40.000 0.00 0.00 0.00 3.06
223 224 4.647853 ACCTTATTCATACCTGCGTAGTCA 59.352 41.667 0.00 0.00 0.00 3.41
224 225 5.197682 ACCTTATTCATACCTGCGTAGTC 57.802 43.478 0.00 0.00 0.00 2.59
225 226 6.912951 ATACCTTATTCATACCTGCGTAGT 57.087 37.500 0.00 0.00 0.00 2.73
226 227 6.090898 GCAATACCTTATTCATACCTGCGTAG 59.909 42.308 0.00 0.00 0.00 3.51
227 228 5.929992 GCAATACCTTATTCATACCTGCGTA 59.070 40.000 0.00 0.00 0.00 4.42
228 229 4.755123 GCAATACCTTATTCATACCTGCGT 59.245 41.667 0.00 0.00 0.00 5.24
229 230 4.997395 AGCAATACCTTATTCATACCTGCG 59.003 41.667 0.00 0.00 0.00 5.18
230 231 6.884280 AAGCAATACCTTATTCATACCTGC 57.116 37.500 0.00 0.00 0.00 4.85
231 232 8.784043 GGTAAAGCAATACCTTATTCATACCTG 58.216 37.037 9.95 0.00 41.80 4.00
232 233 7.942894 GGGTAAAGCAATACCTTATTCATACCT 59.057 37.037 15.18 0.00 44.03 3.08
233 234 7.094933 CGGGTAAAGCAATACCTTATTCATACC 60.095 40.741 15.18 0.00 44.03 2.73
234 235 7.443272 ACGGGTAAAGCAATACCTTATTCATAC 59.557 37.037 15.18 0.00 44.03 2.39
235 236 7.511268 ACGGGTAAAGCAATACCTTATTCATA 58.489 34.615 15.18 0.00 44.03 2.15
236 237 6.362248 ACGGGTAAAGCAATACCTTATTCAT 58.638 36.000 15.18 0.00 44.03 2.57
237 238 5.747342 ACGGGTAAAGCAATACCTTATTCA 58.253 37.500 15.18 0.00 44.03 2.57
238 239 6.688637 AACGGGTAAAGCAATACCTTATTC 57.311 37.500 15.18 1.17 44.03 1.75
239 240 6.660094 TGAAACGGGTAAAGCAATACCTTATT 59.340 34.615 15.18 9.03 44.03 1.40
240 241 6.181908 TGAAACGGGTAAAGCAATACCTTAT 58.818 36.000 15.18 3.14 44.03 1.73
241 242 5.558818 TGAAACGGGTAAAGCAATACCTTA 58.441 37.500 15.18 0.00 44.03 2.69
242 243 4.400120 TGAAACGGGTAAAGCAATACCTT 58.600 39.130 15.18 4.81 44.03 3.50
243 244 4.023726 TGAAACGGGTAAAGCAATACCT 57.976 40.909 15.18 0.00 44.03 3.08
244 245 4.976224 ATGAAACGGGTAAAGCAATACC 57.024 40.909 8.96 8.96 43.88 2.73
245 246 5.354792 TGGTATGAAACGGGTAAAGCAATAC 59.645 40.000 0.00 0.00 0.00 1.89
246 247 5.498393 TGGTATGAAACGGGTAAAGCAATA 58.502 37.500 0.00 0.00 0.00 1.90
247 248 4.337145 TGGTATGAAACGGGTAAAGCAAT 58.663 39.130 0.00 0.00 0.00 3.56
248 249 3.752665 TGGTATGAAACGGGTAAAGCAA 58.247 40.909 0.00 0.00 0.00 3.91
249 250 3.420300 TGGTATGAAACGGGTAAAGCA 57.580 42.857 0.00 0.00 0.00 3.91
250 251 4.274214 GGTATGGTATGAAACGGGTAAAGC 59.726 45.833 0.00 0.00 0.00 3.51
251 252 4.818005 GGGTATGGTATGAAACGGGTAAAG 59.182 45.833 0.00 0.00 0.00 1.85
252 253 4.226846 TGGGTATGGTATGAAACGGGTAAA 59.773 41.667 0.00 0.00 0.00 2.01
253 254 3.779183 TGGGTATGGTATGAAACGGGTAA 59.221 43.478 0.00 0.00 0.00 2.85
254 255 3.382278 TGGGTATGGTATGAAACGGGTA 58.618 45.455 0.00 0.00 0.00 3.69
255 256 2.171870 CTGGGTATGGTATGAAACGGGT 59.828 50.000 0.00 0.00 0.00 5.28
256 257 2.846193 CTGGGTATGGTATGAAACGGG 58.154 52.381 0.00 0.00 0.00 5.28
257 258 2.218603 GCTGGGTATGGTATGAAACGG 58.781 52.381 0.00 0.00 0.00 4.44
258 259 1.864711 CGCTGGGTATGGTATGAAACG 59.135 52.381 0.00 0.00 0.00 3.60
259 260 2.218603 CCGCTGGGTATGGTATGAAAC 58.781 52.381 0.00 0.00 0.00 2.78
260 261 1.142060 CCCGCTGGGTATGGTATGAAA 59.858 52.381 5.56 0.00 38.25 2.69
261 262 0.762418 CCCGCTGGGTATGGTATGAA 59.238 55.000 5.56 0.00 38.25 2.57
262 263 1.764571 GCCCGCTGGGTATGGTATGA 61.765 60.000 13.97 0.00 46.51 2.15
263 264 1.302511 GCCCGCTGGGTATGGTATG 60.303 63.158 13.97 0.00 46.51 2.39
264 265 2.879233 CGCCCGCTGGGTATGGTAT 61.879 63.158 13.97 0.00 46.51 2.73
265 266 3.542676 CGCCCGCTGGGTATGGTA 61.543 66.667 13.97 0.00 46.51 3.25
273 274 3.585990 CTATTTGGCGCCCGCTGG 61.586 66.667 26.77 7.75 41.60 4.85
274 275 3.585990 CCTATTTGGCGCCCGCTG 61.586 66.667 26.77 10.26 41.60 5.18
293 294 0.895559 AAGCCTGCTAACAGCCCAAC 60.896 55.000 0.00 0.00 43.02 3.77
294 295 0.178964 AAAGCCTGCTAACAGCCCAA 60.179 50.000 0.00 0.00 43.02 4.12
361 368 0.472352 AAACGGTGTGGGACCTCCTA 60.472 55.000 0.00 0.00 43.55 2.94
367 374 0.028374 CAACGAAAACGGTGTGGGAC 59.972 55.000 0.00 0.00 0.00 4.46
369 376 1.298788 GCAACGAAAACGGTGTGGG 60.299 57.895 9.27 0.00 0.00 4.61
381 388 3.857052 AGTCGGATTTATTGAGCAACGA 58.143 40.909 0.00 0.00 0.00 3.85
391 398 7.007723 AGAGAGAGAACCATAGTCGGATTTAT 58.992 38.462 0.00 0.00 0.00 1.40
392 399 6.366340 AGAGAGAGAACCATAGTCGGATTTA 58.634 40.000 0.00 0.00 0.00 1.40
393 400 5.205056 AGAGAGAGAACCATAGTCGGATTT 58.795 41.667 0.00 0.00 0.00 2.17
394 401 4.798882 AGAGAGAGAACCATAGTCGGATT 58.201 43.478 0.00 0.00 0.00 3.01
395 402 4.104102 AGAGAGAGAGAACCATAGTCGGAT 59.896 45.833 0.00 0.00 0.00 4.18
396 403 3.456644 AGAGAGAGAGAACCATAGTCGGA 59.543 47.826 0.00 0.00 0.00 4.55
397 404 3.813166 GAGAGAGAGAGAACCATAGTCGG 59.187 52.174 0.00 0.00 0.00 4.79
398 405 4.703897 AGAGAGAGAGAGAACCATAGTCG 58.296 47.826 0.00 0.00 0.00 4.18
399 406 5.930135 AGAGAGAGAGAGAGAACCATAGTC 58.070 45.833 0.00 0.00 0.00 2.59
400 407 5.428457 TGAGAGAGAGAGAGAGAACCATAGT 59.572 44.000 0.00 0.00 0.00 2.12
401 408 5.928976 TGAGAGAGAGAGAGAGAACCATAG 58.071 45.833 0.00 0.00 0.00 2.23
402 409 5.966853 TGAGAGAGAGAGAGAGAACCATA 57.033 43.478 0.00 0.00 0.00 2.74
403 410 4.860802 TGAGAGAGAGAGAGAGAACCAT 57.139 45.455 0.00 0.00 0.00 3.55
404 411 4.649267 TTGAGAGAGAGAGAGAGAACCA 57.351 45.455 0.00 0.00 0.00 3.67
405 412 5.975693 TTTTGAGAGAGAGAGAGAGAACC 57.024 43.478 0.00 0.00 0.00 3.62
431 438 3.615496 CGTCCATAGTCGGATTCGTTTTT 59.385 43.478 0.00 0.00 37.41 1.94
432 439 3.184541 CGTCCATAGTCGGATTCGTTTT 58.815 45.455 0.00 0.00 37.41 2.43
433 440 2.165030 ACGTCCATAGTCGGATTCGTTT 59.835 45.455 0.00 0.00 35.03 3.60
434 441 1.747355 ACGTCCATAGTCGGATTCGTT 59.253 47.619 0.00 0.00 35.03 3.85
435 442 1.065102 CACGTCCATAGTCGGATTCGT 59.935 52.381 0.00 0.00 38.04 3.85
436 443 1.332686 TCACGTCCATAGTCGGATTCG 59.667 52.381 0.00 0.00 37.41 3.34
437 444 2.358267 AGTCACGTCCATAGTCGGATTC 59.642 50.000 0.00 0.00 37.41 2.52
438 445 2.358267 GAGTCACGTCCATAGTCGGATT 59.642 50.000 0.00 0.00 37.41 3.01
459 466 4.864806 TCAAATCGGAATTCGTTGAGAGAG 59.135 41.667 0.00 0.00 40.32 3.20
460 467 4.625742 GTCAAATCGGAATTCGTTGAGAGA 59.374 41.667 10.82 2.65 35.51 3.10
473 480 2.878991 CGAGCGCGTCAAATCGGA 60.879 61.111 8.43 0.00 0.00 4.55
490 497 0.868406 CAAGTGAAGTTGGAGACGGC 59.132 55.000 0.00 0.00 0.00 5.68
527 534 1.702022 GGCCCTGCCGGTCCTATTTA 61.702 60.000 1.90 0.00 39.62 1.40
552 569 1.069765 CGACTGTGGTGTGGAGCTT 59.930 57.895 0.00 0.00 0.00 3.74
553 570 1.686325 AACGACTGTGGTGTGGAGCT 61.686 55.000 0.00 0.00 0.00 4.09
554 571 1.227556 AACGACTGTGGTGTGGAGC 60.228 57.895 0.00 0.00 0.00 4.70
555 572 1.498865 GCAACGACTGTGGTGTGGAG 61.499 60.000 0.00 0.00 0.00 3.86
556 573 1.522806 GCAACGACTGTGGTGTGGA 60.523 57.895 0.00 0.00 0.00 4.02
558 575 1.139989 CTAGCAACGACTGTGGTGTG 58.860 55.000 0.00 0.00 0.00 3.82
559 576 0.033504 CCTAGCAACGACTGTGGTGT 59.966 55.000 0.00 0.00 0.00 4.16
560 577 0.670546 CCCTAGCAACGACTGTGGTG 60.671 60.000 0.00 0.00 0.00 4.17
561 578 1.119574 ACCCTAGCAACGACTGTGGT 61.120 55.000 0.00 0.00 0.00 4.16
616 633 2.032071 CACCACTTCACCGGGGAC 59.968 66.667 5.46 0.00 0.00 4.46
617 634 3.948719 GCACCACTTCACCGGGGA 61.949 66.667 0.00 0.00 0.00 4.81
696 719 2.416836 CGTTCGATCCCTGACTTGCTTA 60.417 50.000 0.00 0.00 0.00 3.09
839 862 1.925285 ATTTCGATCCTGGCTGGGCA 61.925 55.000 10.79 0.00 36.20 5.36
849 872 0.750850 TGACCCTCCGATTTCGATCC 59.249 55.000 0.67 0.00 43.02 3.36
853 876 1.084370 GTGCTGACCCTCCGATTTCG 61.084 60.000 0.00 0.00 39.44 3.46
896 919 1.078214 CGATTCCCAGCCTGCTTCA 60.078 57.895 0.00 0.00 0.00 3.02
921 944 2.126424 GACAGCTGGGTCGACGAC 60.126 66.667 19.70 19.70 0.00 4.34
975 1100 2.579738 GAGGGTTCTCTGCCGGAC 59.420 66.667 5.05 0.00 37.07 4.79
1008 1133 0.250124 CCGGTCTGCCTTGTTGTGTA 60.250 55.000 0.00 0.00 0.00 2.90
1188 1316 0.830648 TATCGTCTCCCAAGCCCAAG 59.169 55.000 0.00 0.00 0.00 3.61
1348 1478 2.050144 TGATGGCAGGACTAGGAATCC 58.950 52.381 0.00 0.00 36.38 3.01
1350 1480 3.596101 AGATGATGGCAGGACTAGGAAT 58.404 45.455 0.00 0.00 0.00 3.01
1361 1491 9.333724 CTGCATATATATAACAAGATGATGGCA 57.666 33.333 0.00 0.00 0.00 4.92
1362 1492 8.288208 GCTGCATATATATAACAAGATGATGGC 58.712 37.037 0.00 0.00 0.00 4.40
1386 1676 8.157476 CAGGGTATTACCAAACTATCATAAGCT 58.843 37.037 14.71 0.00 41.02 3.74
1389 1679 9.841295 GAACAGGGTATTACCAAACTATCATAA 57.159 33.333 14.71 0.00 41.02 1.90
1440 1730 5.895928 TGTGACAGCTATAGACAATGAGAC 58.104 41.667 3.21 0.54 0.00 3.36
1540 1830 5.091261 TCCTCAGAGCACTTAAAAGATCC 57.909 43.478 0.00 0.00 0.00 3.36
1740 2036 3.504863 TGATCTACGTTTTGGCGAGTAC 58.495 45.455 0.00 0.00 35.59 2.73
1785 2096 8.568732 TTTTCAATCTTTTACAAGGTTTAGCG 57.431 30.769 0.00 0.00 30.18 4.26
1787 2098 8.978539 GCCTTTTCAATCTTTTACAAGGTTTAG 58.021 33.333 0.00 0.00 30.18 1.85
1850 2216 6.867816 TGCATGTGAATTGGTCTAAAACAATC 59.132 34.615 0.00 0.00 36.36 2.67
1947 2382 8.975663 AGTATTACTTTCTGGCCTATAAAACC 57.024 34.615 3.32 0.00 0.00 3.27
1981 2416 9.416284 TGTCCTGAGTACAGTTTGTCATATATA 57.584 33.333 0.00 0.00 42.05 0.86
1982 2417 8.306313 TGTCCTGAGTACAGTTTGTCATATAT 57.694 34.615 0.00 0.00 42.05 0.86
2415 2991 9.997482 GTCACAATACAAAGAAAGTTTGTTAGA 57.003 29.630 8.32 0.00 42.10 2.10
2436 3015 2.936919 AGCTTCAATCCACTGTCACA 57.063 45.000 0.00 0.00 0.00 3.58
2506 3094 8.253810 ACATATATATAGTGTCACTCCATGTGC 58.746 37.037 9.26 0.00 45.81 4.57
2562 3153 7.569599 TCTTTCCCCACTAAAATAGAAGAGT 57.430 36.000 0.00 0.00 0.00 3.24
2601 3225 3.623060 GCGATCTTGATTGCTTGGTAAGA 59.377 43.478 13.89 0.00 32.57 2.10
2677 3301 9.601217 AAATAACAAGTGTATGAGAGACCATAC 57.399 33.333 0.00 0.00 45.52 2.39
2679 3303 9.167311 GAAAATAACAAGTGTATGAGAGACCAT 57.833 33.333 0.00 0.00 0.00 3.55
2680 3304 8.154203 TGAAAATAACAAGTGTATGAGAGACCA 58.846 33.333 0.00 0.00 0.00 4.02
2753 3377 5.765510 TCAAAACCCATGCTATCTAACCAT 58.234 37.500 0.00 0.00 0.00 3.55
2834 3458 4.935808 GGTTGTTCAGTACTAACCTCCATG 59.064 45.833 15.29 0.00 36.16 3.66
2875 3514 9.478019 CAAAGCGTCAAAACATAAGAGTTATAG 57.522 33.333 0.00 0.00 0.00 1.31
2886 3525 5.431420 TGTATCACAAAGCGTCAAAACAT 57.569 34.783 0.00 0.00 0.00 2.71
2895 3534 6.863126 AGAAAAGGAAAATGTATCACAAAGCG 59.137 34.615 0.00 0.00 0.00 4.68
2906 3545 6.156083 TGTTCAAAGGGAGAAAAGGAAAATGT 59.844 34.615 0.00 0.00 0.00 2.71
3007 3646 1.325640 CATTCTCCAATGCACGTCTCG 59.674 52.381 0.00 0.00 33.19 4.04
3018 3657 4.005650 GAGCAGAATGTGTCATTCTCCAA 58.994 43.478 18.28 0.00 39.31 3.53
3182 3821 2.159014 ACACAGAACGGCACTTACTTCA 60.159 45.455 0.00 0.00 0.00 3.02
3244 3887 4.748701 ACATTATGGGACGGAGGTAGTAT 58.251 43.478 0.00 0.00 0.00 2.12
3245 3888 4.188937 ACATTATGGGACGGAGGTAGTA 57.811 45.455 0.00 0.00 0.00 1.82
3246 3889 3.042059 ACATTATGGGACGGAGGTAGT 57.958 47.619 0.00 0.00 0.00 2.73
3247 3890 4.831155 TCTTACATTATGGGACGGAGGTAG 59.169 45.833 0.00 0.00 0.00 3.18
3248 3891 4.586001 GTCTTACATTATGGGACGGAGGTA 59.414 45.833 0.00 0.00 0.00 3.08
3249 3892 3.387050 GTCTTACATTATGGGACGGAGGT 59.613 47.826 0.00 0.00 0.00 3.85
3250 3893 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
3251 3894 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
3252 3895 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
3297 3940 6.887545 TCCGTCCCATAATGTAAGACATTTTT 59.112 34.615 9.92 0.00 45.80 1.94
3298 3941 6.419791 TCCGTCCCATAATGTAAGACATTTT 58.580 36.000 9.92 0.33 45.80 1.82
3299 3942 5.996644 TCCGTCCCATAATGTAAGACATTT 58.003 37.500 9.92 0.00 45.80 2.32
3301 3944 4.040461 CCTCCGTCCCATAATGTAAGACAT 59.960 45.833 0.00 0.00 41.31 3.06
3302 3945 3.386726 CCTCCGTCCCATAATGTAAGACA 59.613 47.826 0.00 0.00 0.00 3.41
3303 3946 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3304 3947 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3305 3948 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3306 3949 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3307 3950 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3308 3951 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3309 3952 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3310 3953 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3311 3954 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3312 3955 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3313 3956 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
3314 3957 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
3315 3958 1.273759 AAAACTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
3334 3977 9.519191 TCAGAAATCATGGTATTCAGAAGAAAA 57.481 29.630 0.00 0.00 37.29 2.29
3338 3981 9.784680 CTTTTCAGAAATCATGGTATTCAGAAG 57.215 33.333 0.00 0.00 32.56 2.85
3628 4418 7.408756 TCTTGTTTTGCATTCCATAGCTATT 57.591 32.000 2.64 0.00 0.00 1.73
3784 4590 3.081804 GGACAATGTTCCGATGGTTTCT 58.918 45.455 0.00 0.00 0.00 2.52
3804 4610 4.529769 TCAGGGATAGCATCAGATACAAGG 59.470 45.833 0.00 0.00 0.00 3.61
3822 4628 4.095483 GTCATCTGCAAACTATTGTCAGGG 59.905 45.833 10.72 6.37 39.28 4.45
3829 4635 5.010922 TGGCTTTTGTCATCTGCAAACTATT 59.989 36.000 0.00 0.00 35.82 1.73
3931 4737 7.759489 ATAGTTGAAACTTGAAACAGGCATA 57.241 32.000 0.21 0.00 40.37 3.14
4078 4895 8.883731 CGTGAATCAGGAAGATAAACAGTTAAT 58.116 33.333 0.00 0.00 35.39 1.40
4088 4905 4.422073 AATGGCGTGAATCAGGAAGATA 57.578 40.909 7.17 0.00 35.39 1.98
4104 4921 5.176223 GCTGCATATGTACAAATGAAATGGC 59.824 40.000 0.00 0.00 0.00 4.40
4140 4963 3.371898 TGAATTCTACATGTGCTTCGCAG 59.628 43.478 9.11 0.00 40.08 5.18
4141 4964 3.333804 TGAATTCTACATGTGCTTCGCA 58.666 40.909 9.11 0.00 35.60 5.10
4142 4965 3.242543 CCTGAATTCTACATGTGCTTCGC 60.243 47.826 9.11 0.00 0.00 4.70
4143 4966 3.310774 CCCTGAATTCTACATGTGCTTCG 59.689 47.826 9.11 3.43 0.00 3.79
4144 4967 4.517285 TCCCTGAATTCTACATGTGCTTC 58.483 43.478 9.11 6.59 0.00 3.86
4145 4968 4.574674 TCCCTGAATTCTACATGTGCTT 57.425 40.909 9.11 0.00 0.00 3.91
4146 4969 4.574674 TTCCCTGAATTCTACATGTGCT 57.425 40.909 9.11 0.00 0.00 4.40
4187 5050 9.123902 CCAAAAGAAGGGAAGAATGAAATTTTT 57.876 29.630 0.00 0.00 36.07 1.94
4207 5070 7.761038 ACTAAGAAAGTGTAATCCCCAAAAG 57.239 36.000 0.00 0.00 36.93 2.27
4209 5072 8.219178 TGTAACTAAGAAAGTGTAATCCCCAAA 58.781 33.333 0.00 0.00 38.88 3.28
4279 5638 8.673711 GTGAGCCACATAAAAATGACATACTTA 58.326 33.333 0.00 0.00 34.08 2.24
4280 5639 7.176515 TGTGAGCCACATAAAAATGACATACTT 59.823 33.333 4.16 0.00 39.62 2.24
4282 5641 6.851609 TGTGAGCCACATAAAAATGACATAC 58.148 36.000 4.16 0.00 39.62 2.39
4297 5656 9.072294 GTGTAAATAATTTAACATGTGAGCCAC 57.928 33.333 0.00 0.00 34.56 5.01
4421 6306 5.637810 TGACTACGCATTTTTAGAGAACAGG 59.362 40.000 0.00 0.00 0.00 4.00
4423 6308 6.649141 ACATGACTACGCATTTTTAGAGAACA 59.351 34.615 0.00 0.00 0.00 3.18
4449 6334 6.427150 CACGCCATCCACATTTAAGTATAAC 58.573 40.000 0.00 0.00 0.00 1.89
4451 6336 4.513692 GCACGCCATCCACATTTAAGTATA 59.486 41.667 0.00 0.00 0.00 1.47
4453 6338 2.680841 GCACGCCATCCACATTTAAGTA 59.319 45.455 0.00 0.00 0.00 2.24
4454 6339 1.472480 GCACGCCATCCACATTTAAGT 59.528 47.619 0.00 0.00 0.00 2.24
4500 6385 6.535150 CGTGTCATTGAGCTCCTTATTTAAGA 59.465 38.462 12.15 0.00 35.33 2.10
4508 6393 1.620819 ACTCGTGTCATTGAGCTCCTT 59.379 47.619 12.15 0.00 35.61 3.36
4527 6412 8.856490 ATAGTTTGTTTGAGATGAAAACACAC 57.144 30.769 9.25 9.25 44.81 3.82
4545 6430 8.539674 GTCTGGTTTTGCTTTAACAATAGTTTG 58.460 33.333 0.00 0.00 39.15 2.93
4554 6439 5.842907 AGAATGGTCTGGTTTTGCTTTAAC 58.157 37.500 0.00 0.00 30.83 2.01
4560 6445 2.489722 GGAGAGAATGGTCTGGTTTTGC 59.510 50.000 0.00 0.00 32.80 3.68
4570 6455 2.224233 CGATGCTGATGGAGAGAATGGT 60.224 50.000 0.00 0.00 0.00 3.55
4583 6468 1.869342 CGTGTATCCATGCGATGCTGA 60.869 52.381 11.45 0.00 34.84 4.26
4603 6488 5.588958 AGTATACCTTAGGACCGTGTTTC 57.411 43.478 4.77 0.00 0.00 2.78
4621 6506 3.258372 ACGGATGCGAACATGGATAGTAT 59.742 43.478 15.49 0.00 36.35 2.12
4622 6507 2.626266 ACGGATGCGAACATGGATAGTA 59.374 45.455 15.49 0.00 36.35 1.82
4636 6521 5.041951 TCTGTTGTTGAAATAACGGATGC 57.958 39.130 9.38 0.00 39.49 3.91
4640 6525 4.320935 CCCCTTCTGTTGTTGAAATAACGG 60.321 45.833 5.42 5.42 37.63 4.44
4642 6527 5.508994 CCACCCCTTCTGTTGTTGAAATAAC 60.509 44.000 0.00 0.00 0.00 1.89
4661 6546 3.074538 AGGGTAGATTATGAATGCCACCC 59.925 47.826 0.00 0.00 43.94 4.61
4679 6570 1.208052 CAATCTCATCGTCCACAGGGT 59.792 52.381 0.00 0.00 34.93 4.34
4689 6580 2.280971 CGCAGAACTGACAATCTCATCG 59.719 50.000 5.97 0.00 0.00 3.84
4690 6581 3.515630 TCGCAGAACTGACAATCTCATC 58.484 45.455 5.97 0.00 0.00 2.92
4692 6583 3.599730 ATCGCAGAACTGACAATCTCA 57.400 42.857 5.97 0.00 43.58 3.27
4708 6600 6.021468 GTGTGATTTGTTTGTATAGCAATCGC 60.021 38.462 0.00 0.00 36.89 4.58
4742 6634 9.474313 AATGTGAGTATAGCCCAAGAAAATTTA 57.526 29.630 0.00 0.00 0.00 1.40
4749 6641 5.692115 TGAAATGTGAGTATAGCCCAAGA 57.308 39.130 0.00 0.00 0.00 3.02
4797 6700 1.676014 CCGTCATCGAGCCCTCTTTTT 60.676 52.381 0.00 0.00 39.71 1.94
4852 8106 2.066393 AAGGGGCTGCTCGCTGATA 61.066 57.895 0.00 0.00 39.13 2.15
4925 8198 3.837213 ATACATTGCTATCGCCATTGC 57.163 42.857 0.00 0.00 34.43 3.56
4927 8200 4.826733 TCCAAATACATTGCTATCGCCATT 59.173 37.500 0.00 0.00 37.73 3.16
4987 8266 3.300667 CTTCAGCTGTTGCCGCGTC 62.301 63.158 14.67 0.00 40.80 5.19
4988 8267 3.349006 CTTCAGCTGTTGCCGCGT 61.349 61.111 14.67 0.00 40.80 6.01
4989 8268 4.748679 GCTTCAGCTGTTGCCGCG 62.749 66.667 14.67 0.00 40.80 6.46
4999 8278 0.165511 CGAACTGCTTGAGCTTCAGC 59.834 55.000 10.45 10.45 42.66 4.26
5000 8279 1.725706 CTCGAACTGCTTGAGCTTCAG 59.274 52.381 4.44 0.00 42.66 3.02
5001 8280 1.341209 TCTCGAACTGCTTGAGCTTCA 59.659 47.619 4.44 0.00 42.66 3.02
5002 8281 2.071688 TCTCGAACTGCTTGAGCTTC 57.928 50.000 4.44 0.28 42.66 3.86
5003 8282 2.344950 CATCTCGAACTGCTTGAGCTT 58.655 47.619 4.44 0.00 42.66 3.74
5004 8283 1.405256 CCATCTCGAACTGCTTGAGCT 60.405 52.381 4.44 0.00 42.66 4.09
5005 8284 1.005340 CCATCTCGAACTGCTTGAGC 58.995 55.000 0.00 0.00 42.50 4.26
5006 8285 2.376808 ACCATCTCGAACTGCTTGAG 57.623 50.000 0.00 0.00 0.00 3.02
5007 8286 4.081697 TGAATACCATCTCGAACTGCTTGA 60.082 41.667 0.00 0.00 0.00 3.02
5008 8287 4.183865 TGAATACCATCTCGAACTGCTTG 58.816 43.478 0.00 0.00 0.00 4.01
5009 8288 4.471904 TGAATACCATCTCGAACTGCTT 57.528 40.909 0.00 0.00 0.00 3.91
5010 8289 4.626042 GATGAATACCATCTCGAACTGCT 58.374 43.478 0.00 0.00 46.33 4.24
5011 8290 4.981389 GATGAATACCATCTCGAACTGC 57.019 45.455 0.00 0.00 46.33 4.40
5021 8300 9.976511 CTATTTGATTTGCAAGATGAATACCAT 57.023 29.630 0.00 0.00 37.87 3.55
5022 8301 8.415553 CCTATTTGATTTGCAAGATGAATACCA 58.584 33.333 0.00 0.00 37.87 3.25
5023 8302 7.383300 GCCTATTTGATTTGCAAGATGAATACC 59.617 37.037 0.00 0.00 37.87 2.73
5024 8303 8.139989 AGCCTATTTGATTTGCAAGATGAATAC 58.860 33.333 0.00 0.00 37.87 1.89
5025 8304 8.139350 CAGCCTATTTGATTTGCAAGATGAATA 58.861 33.333 0.00 3.69 37.87 1.75
5026 8305 6.984474 CAGCCTATTTGATTTGCAAGATGAAT 59.016 34.615 0.00 2.69 37.87 2.57
5027 8306 6.071221 ACAGCCTATTTGATTTGCAAGATGAA 60.071 34.615 0.00 0.00 37.87 2.57
5028 8307 5.419788 ACAGCCTATTTGATTTGCAAGATGA 59.580 36.000 0.00 0.00 37.87 2.92
5029 8308 5.657474 ACAGCCTATTTGATTTGCAAGATG 58.343 37.500 0.00 0.00 37.87 2.90
5030 8309 5.419788 TGACAGCCTATTTGATTTGCAAGAT 59.580 36.000 0.00 0.00 37.87 2.40
5031 8310 4.766373 TGACAGCCTATTTGATTTGCAAGA 59.234 37.500 0.00 0.00 37.87 3.02
5032 8311 5.063180 TGACAGCCTATTTGATTTGCAAG 57.937 39.130 0.00 0.00 37.87 4.01
5033 8312 4.766373 TCTGACAGCCTATTTGATTTGCAA 59.234 37.500 0.00 0.00 33.88 4.08
5034 8313 4.334552 TCTGACAGCCTATTTGATTTGCA 58.665 39.130 0.00 0.00 0.00 4.08
5035 8314 4.970662 TCTGACAGCCTATTTGATTTGC 57.029 40.909 0.00 0.00 0.00 3.68
5036 8315 9.512435 CTAATTTCTGACAGCCTATTTGATTTG 57.488 33.333 0.00 0.00 0.00 2.32
5037 8316 9.247861 ACTAATTTCTGACAGCCTATTTGATTT 57.752 29.630 0.00 0.00 0.00 2.17
5038 8317 8.814038 ACTAATTTCTGACAGCCTATTTGATT 57.186 30.769 0.00 0.00 0.00 2.57
5039 8318 8.814038 AACTAATTTCTGACAGCCTATTTGAT 57.186 30.769 0.00 0.00 0.00 2.57
5040 8319 9.905713 ATAACTAATTTCTGACAGCCTATTTGA 57.094 29.630 0.00 0.00 0.00 2.69
5043 8322 9.905713 TGAATAACTAATTTCTGACAGCCTATT 57.094 29.630 0.00 0.30 0.00 1.73
5044 8323 9.553064 CTGAATAACTAATTTCTGACAGCCTAT 57.447 33.333 0.00 0.00 0.00 2.57
5045 8324 8.540388 ACTGAATAACTAATTTCTGACAGCCTA 58.460 33.333 0.00 0.00 0.00 3.93
5046 8325 7.398024 ACTGAATAACTAATTTCTGACAGCCT 58.602 34.615 0.00 0.00 0.00 4.58
5047 8326 7.550906 AGACTGAATAACTAATTTCTGACAGCC 59.449 37.037 0.00 0.00 0.00 4.85
5048 8327 8.386606 CAGACTGAATAACTAATTTCTGACAGC 58.613 37.037 0.00 0.00 34.13 4.40
5049 8328 9.645059 TCAGACTGAATAACTAATTTCTGACAG 57.355 33.333 1.64 0.00 35.49 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.