Multiple sequence alignment - TraesCS1B01G044200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G044200 chr1B 100.000 5445 0 0 1 5445 24164502 24159058 0.000000e+00 10056.0
1 TraesCS1B01G044200 chr1B 91.814 3347 237 17 833 4159 22844128 22840799 0.000000e+00 4628.0
2 TraesCS1B01G044200 chr1B 91.268 2886 181 23 470 3295 24153197 24150323 0.000000e+00 3868.0
3 TraesCS1B01G044200 chr1B 91.125 2907 170 32 626 3450 22887682 22884782 0.000000e+00 3858.0
4 TraesCS1B01G044200 chr1B 87.297 1968 208 20 2153 4101 21999447 22001391 0.000000e+00 2211.0
5 TraesCS1B01G044200 chr1B 88.688 1547 123 16 3290 4793 24145306 24143769 0.000000e+00 1840.0
6 TraesCS1B01G044200 chr1B 88.616 1221 105 11 3360 4579 22883439 22882252 0.000000e+00 1454.0
7 TraesCS1B01G044200 chr1B 91.586 618 21 9 4792 5390 22881883 22881278 0.000000e+00 824.0
8 TraesCS1B01G044200 chr1B 84.987 393 32 12 465 834 22844744 22844356 1.850000e-99 374.0
9 TraesCS1B01G044200 chr1B 88.274 307 36 0 4181 4487 22840637 22840331 8.620000e-98 368.0
10 TraesCS1B01G044200 chr1B 89.362 282 19 6 4657 4932 22840121 22839845 1.450000e-90 344.0
11 TraesCS1B01G044200 chr1B 87.113 194 9 4 4617 4794 22882157 22881964 7.150000e-49 206.0
12 TraesCS1B01G044200 chr1B 90.210 143 13 1 462 604 22891957 22891816 9.310000e-43 185.0
13 TraesCS1B01G044200 chr1B 90.909 132 10 1 4787 4916 22019533 22019664 5.610000e-40 176.0
14 TraesCS1B01G044200 chr1B 94.286 70 4 0 5201 5270 22884232 22884163 2.070000e-19 108.0
15 TraesCS1B01G044200 chr1B 93.220 59 4 0 5387 5445 22879799 22879741 2.700000e-13 87.9
16 TraesCS1B01G044200 chr1B 88.235 68 6 2 4933 4999 642043805 642043871 4.520000e-11 80.5
17 TraesCS1B01G044200 chr1D 89.192 3377 273 36 1607 4923 15293680 15297024 0.000000e+00 4130.0
18 TraesCS1B01G044200 chr1D 92.094 468 15 8 4994 5445 15297393 15297854 1.650000e-179 640.0
19 TraesCS1B01G044200 chr1D 91.935 248 15 4 4689 4932 15298142 15298388 5.220000e-90 342.0
20 TraesCS1B01G044200 chr1D 85.577 104 15 0 287 390 103408779 103408882 5.770000e-20 110.0
21 TraesCS1B01G044200 chr1D 83.000 100 17 0 287 386 106843557 106843656 2.090000e-14 91.6
22 TraesCS1B01G044200 chr1D 87.838 74 5 3 4930 4999 492364855 492364782 3.500000e-12 84.2
23 TraesCS1B01G044200 chr5B 83.309 3379 505 41 1014 4365 534918080 534914734 0.000000e+00 3061.0
24 TraesCS1B01G044200 chr5B 84.845 1544 212 11 1309 2838 534862381 534860846 0.000000e+00 1535.0
25 TraesCS1B01G044200 chr5B 80.980 1020 151 27 2982 3993 534860715 534859731 0.000000e+00 769.0
26 TraesCS1B01G044200 chr5B 83.212 411 62 5 4049 4454 534859745 534859337 2.400000e-98 370.0
27 TraesCS1B01G044200 chr5D 83.312 3134 446 48 880 3981 439793767 439790679 0.000000e+00 2819.0
28 TraesCS1B01G044200 chr5D 80.049 812 133 20 3671 4467 439786518 439785721 4.730000e-160 575.0
29 TraesCS1B01G044200 chr5D 87.500 72 7 2 4887 4956 398772674 398772745 1.260000e-11 82.4
30 TraesCS1B01G044200 chrUn 83.845 2934 418 37 1332 4243 80087870 80090769 0.000000e+00 2741.0
31 TraesCS1B01G044200 chrUn 84.657 1675 232 14 1306 2964 80135709 80137374 0.000000e+00 1646.0
32 TraesCS1B01G044200 chrUn 81.653 992 153 23 874 1844 325202136 325203119 0.000000e+00 797.0
33 TraesCS1B01G044200 chrUn 80.882 1020 152 27 2982 3993 223958638 223957654 0.000000e+00 763.0
34 TraesCS1B01G044200 chrUn 83.846 390 56 5 4049 4433 80138430 80138817 1.110000e-96 364.0
35 TraesCS1B01G044200 chrUn 82.968 411 63 5 4049 4454 223957668 223957260 1.110000e-96 364.0
36 TraesCS1B01G044200 chr6A 82.830 1788 255 30 1353 3113 570740852 570742614 0.000000e+00 1554.0
37 TraesCS1B01G044200 chr4A 79.098 2306 361 66 473 2696 743448970 743446704 0.000000e+00 1476.0
38 TraesCS1B01G044200 chr4A 78.794 929 156 24 3354 4269 743445505 743444605 2.190000e-163 586.0
39 TraesCS1B01G044200 chr7A 81.432 1411 227 20 2705 4104 654345 652959 0.000000e+00 1122.0
40 TraesCS1B01G044200 chr7A 86.486 74 4 2 4933 5000 28155549 28155622 5.850000e-10 76.8
41 TraesCS1B01G044200 chr5A 85.000 100 14 1 287 386 691401291 691401193 3.470000e-17 100.0
42 TraesCS1B01G044200 chr5A 87.838 74 7 2 4926 4998 11519763 11519835 9.720000e-13 86.1
43 TraesCS1B01G044200 chr5A 82.000 100 16 1 287 386 546411022 546411119 3.500000e-12 84.2
44 TraesCS1B01G044200 chr5A 97.561 41 1 0 4887 4927 637619189 637619229 2.720000e-08 71.3
45 TraesCS1B01G044200 chr2B 84.000 100 16 0 287 386 28506392 28506293 4.490000e-16 97.1
46 TraesCS1B01G044200 chr2B 88.571 70 5 2 4933 4999 619681412 619681481 1.260000e-11 82.4
47 TraesCS1B01G044200 chr4B 81.905 105 17 2 284 386 507362018 507362122 2.700000e-13 87.9
48 TraesCS1B01G044200 chr6B 87.671 73 9 0 4926 4998 566550476 566550548 9.720000e-13 86.1
49 TraesCS1B01G044200 chr3D 89.706 68 5 2 4933 4998 3821339 3821272 9.720000e-13 86.1
50 TraesCS1B01G044200 chr3D 82.178 101 15 3 287 386 614689040 614688942 3.500000e-12 84.2
51 TraesCS1B01G044200 chr3B 81.373 102 19 0 285 386 97725501 97725602 3.500000e-12 84.2
52 TraesCS1B01G044200 chr1A 81.373 102 17 2 287 386 518044308 518044409 1.260000e-11 82.4
53 TraesCS1B01G044200 chr1A 92.000 50 2 2 4887 4935 241190902 241190950 9.790000e-08 69.4
54 TraesCS1B01G044200 chr6D 88.060 67 7 1 4932 4998 129780568 129780503 1.630000e-10 78.7
55 TraesCS1B01G044200 chr2D 86.111 72 9 1 4933 5004 623473732 623473662 5.850000e-10 76.8
56 TraesCS1B01G044200 chr3A 88.462 52 4 2 4878 4928 658896575 658896525 1.640000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G044200 chr1B 24159058 24164502 5444 True 10056.000000 10056 100.000000 1 5445 1 chr1B.!!$R4 5444
1 TraesCS1B01G044200 chr1B 24150323 24153197 2874 True 3868.000000 3868 91.268000 470 3295 1 chr1B.!!$R3 2825
2 TraesCS1B01G044200 chr1B 21999447 22001391 1944 False 2211.000000 2211 87.297000 2153 4101 1 chr1B.!!$F1 1948
3 TraesCS1B01G044200 chr1B 24143769 24145306 1537 True 1840.000000 1840 88.688000 3290 4793 1 chr1B.!!$R2 1503
4 TraesCS1B01G044200 chr1B 22839845 22844744 4899 True 1428.500000 4628 88.609250 465 4932 4 chr1B.!!$R5 4467
5 TraesCS1B01G044200 chr1B 22879741 22887682 7941 True 1089.650000 3858 90.991000 626 5445 6 chr1B.!!$R6 4819
6 TraesCS1B01G044200 chr1D 15293680 15298388 4708 False 1704.000000 4130 91.073667 1607 5445 3 chr1D.!!$F3 3838
7 TraesCS1B01G044200 chr5B 534914734 534918080 3346 True 3061.000000 3061 83.309000 1014 4365 1 chr5B.!!$R1 3351
8 TraesCS1B01G044200 chr5B 534859337 534862381 3044 True 891.333333 1535 83.012333 1309 4454 3 chr5B.!!$R2 3145
9 TraesCS1B01G044200 chr5D 439790679 439793767 3088 True 2819.000000 2819 83.312000 880 3981 1 chr5D.!!$R2 3101
10 TraesCS1B01G044200 chr5D 439785721 439786518 797 True 575.000000 575 80.049000 3671 4467 1 chr5D.!!$R1 796
11 TraesCS1B01G044200 chrUn 80087870 80090769 2899 False 2741.000000 2741 83.845000 1332 4243 1 chrUn.!!$F1 2911
12 TraesCS1B01G044200 chrUn 80135709 80138817 3108 False 1005.000000 1646 84.251500 1306 4433 2 chrUn.!!$F3 3127
13 TraesCS1B01G044200 chrUn 325202136 325203119 983 False 797.000000 797 81.653000 874 1844 1 chrUn.!!$F2 970
14 TraesCS1B01G044200 chrUn 223957260 223958638 1378 True 563.500000 763 81.925000 2982 4454 2 chrUn.!!$R1 1472
15 TraesCS1B01G044200 chr6A 570740852 570742614 1762 False 1554.000000 1554 82.830000 1353 3113 1 chr6A.!!$F1 1760
16 TraesCS1B01G044200 chr4A 743444605 743448970 4365 True 1031.000000 1476 78.946000 473 4269 2 chr4A.!!$R1 3796
17 TraesCS1B01G044200 chr7A 652959 654345 1386 True 1122.000000 1122 81.432000 2705 4104 1 chr7A.!!$R1 1399

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.103937 GGCATCCTCTCGTCTCCTTG 59.896 60.000 0.00 0.00 0.00 3.61 F
394 395 0.106819 ATGGAGGGAGTGCATGCTTC 60.107 55.000 20.33 15.81 35.52 3.86 F
1049 1364 0.108138 ACTACATCTTCAGGCCACGC 60.108 55.000 5.01 0.00 0.00 5.34 F
1388 1712 1.372582 TGCTTGACCTCATTGATCGC 58.627 50.000 0.00 0.00 0.00 4.58 F
1422 1746 1.745827 GCCATAAGGAACAAGCGGCTA 60.746 52.381 1.35 0.00 36.89 3.93 F
2317 2687 2.325583 TCTTGCAACGACCAGAAGTT 57.674 45.000 0.00 0.00 0.00 2.66 F
3286 3776 1.480954 TCCTGAGGCGGTGAAGATAAC 59.519 52.381 0.00 0.00 0.00 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1312 1636 1.678101 CCTCCAGCCGATCAAATTTCC 59.322 52.381 0.00 0.0 0.0 3.13 R
2195 2558 0.250727 GGCCAACTAGCTCACCAACA 60.251 55.000 0.00 0.0 0.0 3.33 R
2326 2696 0.874390 GTCTTCACCAATGCGCTTCA 59.126 50.000 9.73 0.0 0.0 3.02 R
2328 2698 1.538047 ATGTCTTCACCAATGCGCTT 58.462 45.000 9.73 0.0 0.0 4.68 R
2881 3294 1.743772 CGCATACCAGGGACCTCAAAG 60.744 57.143 0.00 0.0 0.0 2.77 R
3586 6024 0.261991 ATAGCCCGGTCTCTCAAGGA 59.738 55.000 0.00 0.0 0.0 3.36 R
4549 7185 1.593196 TTGTTTTCCTCGCACTCCTG 58.407 50.000 0.00 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.672251 GTGGCATTGGCATCCTCT 57.328 55.556 16.56 0.00 43.71 3.69
18 19 2.412605 GTGGCATTGGCATCCTCTC 58.587 57.895 16.56 0.00 43.71 3.20
19 20 1.153107 TGGCATTGGCATCCTCTCG 60.153 57.895 9.11 0.00 43.71 4.04
20 21 1.153086 GGCATTGGCATCCTCTCGT 60.153 57.895 5.17 0.00 43.71 4.18
21 22 1.162800 GGCATTGGCATCCTCTCGTC 61.163 60.000 5.17 0.00 43.71 4.20
22 23 0.179062 GCATTGGCATCCTCTCGTCT 60.179 55.000 0.00 0.00 40.72 4.18
23 24 1.863267 CATTGGCATCCTCTCGTCTC 58.137 55.000 0.00 0.00 0.00 3.36
24 25 0.755686 ATTGGCATCCTCTCGTCTCC 59.244 55.000 0.00 0.00 0.00 3.71
25 26 0.324738 TTGGCATCCTCTCGTCTCCT 60.325 55.000 0.00 0.00 0.00 3.69
26 27 0.324738 TGGCATCCTCTCGTCTCCTT 60.325 55.000 0.00 0.00 0.00 3.36
27 28 0.103937 GGCATCCTCTCGTCTCCTTG 59.896 60.000 0.00 0.00 0.00 3.61
28 29 0.103937 GCATCCTCTCGTCTCCTTGG 59.896 60.000 0.00 0.00 0.00 3.61
29 30 1.769026 CATCCTCTCGTCTCCTTGGA 58.231 55.000 0.00 0.00 0.00 3.53
30 31 2.315176 CATCCTCTCGTCTCCTTGGAT 58.685 52.381 0.00 0.00 34.98 3.41
31 32 3.491342 CATCCTCTCGTCTCCTTGGATA 58.509 50.000 0.00 0.00 33.53 2.59
32 33 3.216187 TCCTCTCGTCTCCTTGGATAG 57.784 52.381 0.00 0.00 0.00 2.08
33 34 1.611491 CCTCTCGTCTCCTTGGATAGC 59.389 57.143 0.00 0.00 0.00 2.97
34 35 2.582052 CTCTCGTCTCCTTGGATAGCT 58.418 52.381 0.00 0.00 0.00 3.32
35 36 3.497048 CCTCTCGTCTCCTTGGATAGCTA 60.497 52.174 0.00 0.00 0.00 3.32
36 37 4.331968 CTCTCGTCTCCTTGGATAGCTAT 58.668 47.826 5.76 5.76 0.00 2.97
37 38 5.492895 CTCTCGTCTCCTTGGATAGCTATA 58.507 45.833 6.13 0.00 0.00 1.31
38 39 6.068461 TCTCGTCTCCTTGGATAGCTATAT 57.932 41.667 6.13 0.00 0.00 0.86
39 40 5.883115 TCTCGTCTCCTTGGATAGCTATATG 59.117 44.000 6.13 0.00 0.00 1.78
40 41 5.816682 TCGTCTCCTTGGATAGCTATATGA 58.183 41.667 6.13 0.00 0.00 2.15
41 42 5.648526 TCGTCTCCTTGGATAGCTATATGAC 59.351 44.000 6.13 6.66 0.00 3.06
42 43 5.163602 CGTCTCCTTGGATAGCTATATGACC 60.164 48.000 6.13 4.19 0.00 4.02
43 44 5.955355 GTCTCCTTGGATAGCTATATGACCT 59.045 44.000 6.13 0.00 0.00 3.85
44 45 6.439058 GTCTCCTTGGATAGCTATATGACCTT 59.561 42.308 6.13 0.00 0.00 3.50
45 46 7.019388 TCTCCTTGGATAGCTATATGACCTTT 58.981 38.462 6.13 0.00 0.00 3.11
46 47 7.009179 TCCTTGGATAGCTATATGACCTTTG 57.991 40.000 6.13 0.00 0.00 2.77
47 48 6.787458 TCCTTGGATAGCTATATGACCTTTGA 59.213 38.462 6.13 0.00 0.00 2.69
48 49 6.876257 CCTTGGATAGCTATATGACCTTTGAC 59.124 42.308 6.13 0.00 0.00 3.18
49 50 6.360370 TGGATAGCTATATGACCTTTGACC 57.640 41.667 6.13 0.00 0.00 4.02
50 51 6.084738 TGGATAGCTATATGACCTTTGACCT 58.915 40.000 6.13 0.00 0.00 3.85
51 52 6.014242 TGGATAGCTATATGACCTTTGACCTG 60.014 42.308 6.13 0.00 0.00 4.00
52 53 4.696479 AGCTATATGACCTTTGACCTGG 57.304 45.455 0.00 0.00 0.00 4.45
53 54 4.298626 AGCTATATGACCTTTGACCTGGA 58.701 43.478 0.00 0.00 0.00 3.86
54 55 4.910304 AGCTATATGACCTTTGACCTGGAT 59.090 41.667 0.00 0.00 0.00 3.41
55 56 4.999950 GCTATATGACCTTTGACCTGGATG 59.000 45.833 0.00 0.00 0.00 3.51
56 57 5.221722 GCTATATGACCTTTGACCTGGATGA 60.222 44.000 0.00 0.00 0.00 2.92
57 58 2.859165 TGACCTTTGACCTGGATGAC 57.141 50.000 0.00 0.00 0.00 3.06
58 59 2.338809 TGACCTTTGACCTGGATGACT 58.661 47.619 0.00 0.00 0.00 3.41
59 60 2.711009 TGACCTTTGACCTGGATGACTT 59.289 45.455 0.00 0.00 0.00 3.01
60 61 3.244561 TGACCTTTGACCTGGATGACTTC 60.245 47.826 0.00 0.00 0.00 3.01
61 62 2.711009 ACCTTTGACCTGGATGACTTCA 59.289 45.455 0.00 0.00 0.00 3.02
62 63 3.138283 ACCTTTGACCTGGATGACTTCAA 59.862 43.478 0.00 0.00 0.00 2.69
63 64 3.503748 CCTTTGACCTGGATGACTTCAAC 59.496 47.826 0.00 0.00 0.00 3.18
64 65 2.859165 TGACCTGGATGACTTCAACC 57.141 50.000 0.00 0.00 39.04 3.77
65 66 1.351017 TGACCTGGATGACTTCAACCC 59.649 52.381 0.00 0.00 37.94 4.11
66 67 1.351017 GACCTGGATGACTTCAACCCA 59.649 52.381 0.00 3.87 37.94 4.51
67 68 1.073923 ACCTGGATGACTTCAACCCAC 59.926 52.381 0.00 0.00 37.94 4.61
68 69 1.352352 CCTGGATGACTTCAACCCACT 59.648 52.381 3.29 0.00 37.94 4.00
69 70 2.571653 CCTGGATGACTTCAACCCACTA 59.428 50.000 3.29 0.00 37.94 2.74
70 71 3.200825 CCTGGATGACTTCAACCCACTAT 59.799 47.826 3.29 0.00 37.94 2.12
71 72 4.446371 CTGGATGACTTCAACCCACTATC 58.554 47.826 3.29 0.00 37.94 2.08
72 73 3.199946 TGGATGACTTCAACCCACTATCC 59.800 47.826 3.29 0.00 37.94 2.59
73 74 3.458189 GATGACTTCAACCCACTATCCG 58.542 50.000 0.00 0.00 0.00 4.18
74 75 1.553248 TGACTTCAACCCACTATCCGG 59.447 52.381 0.00 0.00 0.00 5.14
75 76 1.553704 GACTTCAACCCACTATCCGGT 59.446 52.381 0.00 0.00 0.00 5.28
76 77 1.982958 ACTTCAACCCACTATCCGGTT 59.017 47.619 0.00 0.00 43.24 4.44
77 78 2.027469 ACTTCAACCCACTATCCGGTTC 60.027 50.000 0.00 0.00 40.44 3.62
78 79 1.646912 TCAACCCACTATCCGGTTCA 58.353 50.000 0.00 0.00 40.44 3.18
79 80 1.553248 TCAACCCACTATCCGGTTCAG 59.447 52.381 0.00 0.00 40.44 3.02
80 81 1.553248 CAACCCACTATCCGGTTCAGA 59.447 52.381 0.00 0.00 40.44 3.27
81 82 2.170607 CAACCCACTATCCGGTTCAGAT 59.829 50.000 0.00 0.00 40.44 2.90
82 83 2.040178 ACCCACTATCCGGTTCAGATC 58.960 52.381 0.00 0.00 0.00 2.75
83 84 2.320781 CCCACTATCCGGTTCAGATCT 58.679 52.381 0.00 0.00 0.00 2.75
84 85 3.117246 ACCCACTATCCGGTTCAGATCTA 60.117 47.826 0.00 0.00 0.00 1.98
85 86 3.895656 CCCACTATCCGGTTCAGATCTAA 59.104 47.826 0.00 0.00 0.00 2.10
86 87 4.262079 CCCACTATCCGGTTCAGATCTAAC 60.262 50.000 0.00 0.88 0.00 2.34
87 88 4.585162 CCACTATCCGGTTCAGATCTAACT 59.415 45.833 0.00 0.00 0.00 2.24
88 89 5.278561 CCACTATCCGGTTCAGATCTAACTC 60.279 48.000 0.00 0.00 0.00 3.01
89 90 4.828387 ACTATCCGGTTCAGATCTAACTCC 59.172 45.833 0.00 0.00 0.00 3.85
90 91 2.385803 TCCGGTTCAGATCTAACTCCC 58.614 52.381 0.00 0.00 0.00 4.30
91 92 1.413077 CCGGTTCAGATCTAACTCCCC 59.587 57.143 0.00 0.00 0.00 4.81
92 93 2.108168 CGGTTCAGATCTAACTCCCCA 58.892 52.381 0.00 0.00 0.00 4.96
93 94 2.101582 CGGTTCAGATCTAACTCCCCAG 59.898 54.545 0.00 0.00 0.00 4.45
94 95 2.436173 GGTTCAGATCTAACTCCCCAGG 59.564 54.545 0.00 0.00 0.00 4.45
95 96 1.794714 TCAGATCTAACTCCCCAGGC 58.205 55.000 0.00 0.00 0.00 4.85
96 97 0.761802 CAGATCTAACTCCCCAGGCC 59.238 60.000 0.00 0.00 0.00 5.19
97 98 0.400670 AGATCTAACTCCCCAGGCCC 60.401 60.000 0.00 0.00 0.00 5.80
98 99 1.386057 ATCTAACTCCCCAGGCCCC 60.386 63.158 0.00 0.00 0.00 5.80
99 100 2.934876 ATCTAACTCCCCAGGCCCCC 62.935 65.000 0.00 0.00 0.00 5.40
153 154 4.851179 GATCCCGTCCGCAACCCC 62.851 72.222 0.00 0.00 0.00 4.95
164 165 2.792222 CAACCCCCTCCCCTCCTA 59.208 66.667 0.00 0.00 0.00 2.94
165 166 1.321943 CAACCCCCTCCCCTCCTAT 59.678 63.158 0.00 0.00 0.00 2.57
166 167 0.768609 CAACCCCCTCCCCTCCTATC 60.769 65.000 0.00 0.00 0.00 2.08
167 168 0.942040 AACCCCCTCCCCTCCTATCT 60.942 60.000 0.00 0.00 0.00 1.98
168 169 0.942040 ACCCCCTCCCCTCCTATCTT 60.942 60.000 0.00 0.00 0.00 2.40
169 170 0.178888 CCCCCTCCCCTCCTATCTTC 60.179 65.000 0.00 0.00 0.00 2.87
170 171 0.871024 CCCCTCCCCTCCTATCTTCT 59.129 60.000 0.00 0.00 0.00 2.85
171 172 2.082669 CCCCTCCCCTCCTATCTTCTA 58.917 57.143 0.00 0.00 0.00 2.10
172 173 2.225420 CCCCTCCCCTCCTATCTTCTAC 60.225 59.091 0.00 0.00 0.00 2.59
173 174 2.225420 CCCTCCCCTCCTATCTTCTACC 60.225 59.091 0.00 0.00 0.00 3.18
174 175 2.725227 CCTCCCCTCCTATCTTCTACCT 59.275 54.545 0.00 0.00 0.00 3.08
175 176 3.245479 CCTCCCCTCCTATCTTCTACCTC 60.245 56.522 0.00 0.00 0.00 3.85
176 177 2.723010 TCCCCTCCTATCTTCTACCTCC 59.277 54.545 0.00 0.00 0.00 4.30
177 178 2.225420 CCCCTCCTATCTTCTACCTCCC 60.225 59.091 0.00 0.00 0.00 4.30
178 179 2.451273 CCCTCCTATCTTCTACCTCCCA 59.549 54.545 0.00 0.00 0.00 4.37
179 180 3.501385 CCCTCCTATCTTCTACCTCCCAG 60.501 56.522 0.00 0.00 0.00 4.45
180 181 3.161866 CTCCTATCTTCTACCTCCCAGC 58.838 54.545 0.00 0.00 0.00 4.85
181 182 2.158295 TCCTATCTTCTACCTCCCAGCC 60.158 54.545 0.00 0.00 0.00 4.85
182 183 2.426414 CCTATCTTCTACCTCCCAGCCA 60.426 54.545 0.00 0.00 0.00 4.75
183 184 1.501582 ATCTTCTACCTCCCAGCCAC 58.498 55.000 0.00 0.00 0.00 5.01
184 185 0.617820 TCTTCTACCTCCCAGCCACC 60.618 60.000 0.00 0.00 0.00 4.61
185 186 1.961180 CTTCTACCTCCCAGCCACCG 61.961 65.000 0.00 0.00 0.00 4.94
186 187 4.162690 CTACCTCCCAGCCACCGC 62.163 72.222 0.00 0.00 0.00 5.68
205 206 4.996434 GGCAGAGCACGTGTGGCT 62.996 66.667 18.38 8.16 46.07 4.75
206 207 3.720193 GCAGAGCACGTGTGGCTG 61.720 66.667 18.38 20.54 42.78 4.85
207 208 2.029518 CAGAGCACGTGTGGCTGA 59.970 61.111 21.70 0.00 42.78 4.26
208 209 2.029666 AGAGCACGTGTGGCTGAC 59.970 61.111 18.38 0.00 42.78 3.51
209 210 3.406361 GAGCACGTGTGGCTGACG 61.406 66.667 18.38 7.22 42.78 4.35
210 211 4.969196 AGCACGTGTGGCTGACGG 62.969 66.667 18.38 4.21 40.80 4.79
221 222 3.274586 CTGACGGCGGCATCCATG 61.275 66.667 19.33 0.00 0.00 3.66
222 223 4.854924 TGACGGCGGCATCCATGG 62.855 66.667 13.60 4.97 0.00 3.66
223 224 4.856801 GACGGCGGCATCCATGGT 62.857 66.667 8.47 0.00 0.00 3.55
225 226 4.854924 CGGCGGCATCCATGGTGA 62.855 66.667 12.58 0.00 0.00 4.02
226 227 2.203394 GGCGGCATCCATGGTGAT 60.203 61.111 12.58 0.00 0.00 3.06
227 228 2.558286 GGCGGCATCCATGGTGATG 61.558 63.158 12.58 10.34 44.02 3.07
236 237 2.423446 CCATGGTGATGGTGATGTCA 57.577 50.000 2.57 0.00 43.98 3.58
237 238 2.019249 CCATGGTGATGGTGATGTCAC 58.981 52.381 2.57 4.58 43.98 3.67
248 249 2.778299 GTGATGTCACCTTAGTTGGCA 58.222 47.619 1.68 0.00 40.85 4.92
249 250 3.146066 GTGATGTCACCTTAGTTGGCAA 58.854 45.455 0.00 0.00 40.85 4.52
250 251 3.568007 GTGATGTCACCTTAGTTGGCAAA 59.432 43.478 0.00 0.00 40.85 3.68
251 252 4.037446 GTGATGTCACCTTAGTTGGCAAAA 59.963 41.667 0.00 0.00 40.85 2.44
252 253 4.832266 TGATGTCACCTTAGTTGGCAAAAT 59.168 37.500 0.00 0.00 0.00 1.82
253 254 6.007076 TGATGTCACCTTAGTTGGCAAAATA 58.993 36.000 0.00 0.00 0.00 1.40
254 255 5.699097 TGTCACCTTAGTTGGCAAAATAC 57.301 39.130 0.00 0.00 0.00 1.89
255 256 5.133941 TGTCACCTTAGTTGGCAAAATACA 58.866 37.500 0.00 0.00 0.00 2.29
256 257 5.594725 TGTCACCTTAGTTGGCAAAATACAA 59.405 36.000 0.00 0.00 0.00 2.41
257 258 6.149633 GTCACCTTAGTTGGCAAAATACAAG 58.850 40.000 0.00 1.34 0.00 3.16
258 259 5.830991 TCACCTTAGTTGGCAAAATACAAGT 59.169 36.000 0.00 0.00 34.79 3.16
259 260 6.016610 TCACCTTAGTTGGCAAAATACAAGTC 60.017 38.462 0.00 0.00 32.82 3.01
260 261 6.016276 CACCTTAGTTGGCAAAATACAAGTCT 60.016 38.462 0.00 0.00 32.82 3.24
261 262 6.549736 ACCTTAGTTGGCAAAATACAAGTCTT 59.450 34.615 0.00 0.00 32.82 3.01
262 263 7.069455 ACCTTAGTTGGCAAAATACAAGTCTTT 59.931 33.333 0.00 0.00 32.82 2.52
263 264 7.926018 CCTTAGTTGGCAAAATACAAGTCTTTT 59.074 33.333 0.00 0.00 32.82 2.27
264 265 9.959749 CTTAGTTGGCAAAATACAAGTCTTTTA 57.040 29.630 0.00 0.00 32.82 1.52
266 267 8.642908 AGTTGGCAAAATACAAGTCTTTTAAC 57.357 30.769 0.00 0.25 0.00 2.01
267 268 8.474831 AGTTGGCAAAATACAAGTCTTTTAACT 58.525 29.630 0.00 5.40 0.00 2.24
268 269 9.738832 GTTGGCAAAATACAAGTCTTTTAACTA 57.261 29.630 0.00 0.00 0.00 2.24
269 270 9.738832 TTGGCAAAATACAAGTCTTTTAACTAC 57.261 29.630 0.00 0.00 0.00 2.73
270 271 8.904834 TGGCAAAATACAAGTCTTTTAACTACA 58.095 29.630 0.00 0.00 0.00 2.74
271 272 9.908152 GGCAAAATACAAGTCTTTTAACTACAT 57.092 29.630 0.00 0.00 0.00 2.29
277 278 7.647907 ACAAGTCTTTTAACTACATACACGG 57.352 36.000 0.00 0.00 0.00 4.94
278 279 7.436118 ACAAGTCTTTTAACTACATACACGGA 58.564 34.615 0.00 0.00 0.00 4.69
279 280 7.597743 ACAAGTCTTTTAACTACATACACGGAG 59.402 37.037 0.00 0.00 0.00 4.63
280 281 6.098017 AGTCTTTTAACTACATACACGGAGC 58.902 40.000 0.00 0.00 0.00 4.70
281 282 5.865552 GTCTTTTAACTACATACACGGAGCA 59.134 40.000 0.00 0.00 0.00 4.26
282 283 6.366877 GTCTTTTAACTACATACACGGAGCAA 59.633 38.462 0.00 0.00 0.00 3.91
283 284 6.930164 TCTTTTAACTACATACACGGAGCAAA 59.070 34.615 0.00 0.00 0.00 3.68
284 285 7.441760 TCTTTTAACTACATACACGGAGCAAAA 59.558 33.333 0.00 0.00 0.00 2.44
285 286 7.675962 TTTAACTACATACACGGAGCAAAAT 57.324 32.000 0.00 0.00 0.00 1.82
286 287 5.796350 AACTACATACACGGAGCAAAATC 57.204 39.130 0.00 0.00 0.00 2.17
287 288 4.827692 ACTACATACACGGAGCAAAATCA 58.172 39.130 0.00 0.00 0.00 2.57
288 289 5.242434 ACTACATACACGGAGCAAAATCAA 58.758 37.500 0.00 0.00 0.00 2.57
289 290 5.703592 ACTACATACACGGAGCAAAATCAAA 59.296 36.000 0.00 0.00 0.00 2.69
290 291 5.446143 ACATACACGGAGCAAAATCAAAA 57.554 34.783 0.00 0.00 0.00 2.44
291 292 6.024552 ACATACACGGAGCAAAATCAAAAT 57.975 33.333 0.00 0.00 0.00 1.82
292 293 7.151999 ACATACACGGAGCAAAATCAAAATA 57.848 32.000 0.00 0.00 0.00 1.40
293 294 7.598278 ACATACACGGAGCAAAATCAAAATAA 58.402 30.769 0.00 0.00 0.00 1.40
294 295 7.754924 ACATACACGGAGCAAAATCAAAATAAG 59.245 33.333 0.00 0.00 0.00 1.73
295 296 6.084326 ACACGGAGCAAAATCAAAATAAGT 57.916 33.333 0.00 0.00 0.00 2.24
296 297 5.920273 ACACGGAGCAAAATCAAAATAAGTG 59.080 36.000 0.00 0.00 0.00 3.16
297 298 6.148948 CACGGAGCAAAATCAAAATAAGTGA 58.851 36.000 0.00 0.00 0.00 3.41
298 299 6.640499 CACGGAGCAAAATCAAAATAAGTGAA 59.360 34.615 0.00 0.00 0.00 3.18
299 300 7.329226 CACGGAGCAAAATCAAAATAAGTGAAT 59.671 33.333 0.00 0.00 0.00 2.57
300 301 7.542130 ACGGAGCAAAATCAAAATAAGTGAATC 59.458 33.333 0.00 0.00 0.00 2.52
301 302 7.756722 CGGAGCAAAATCAAAATAAGTGAATCT 59.243 33.333 0.00 0.00 0.00 2.40
346 347 9.958285 GTATACATTTATATGTTGTCTGCATCG 57.042 33.333 4.06 0.00 42.29 3.84
347 348 8.831715 ATACATTTATATGTTGTCTGCATCGA 57.168 30.769 4.06 0.00 42.29 3.59
348 349 7.552458 ACATTTATATGTTGTCTGCATCGAA 57.448 32.000 0.00 0.00 42.29 3.71
349 350 7.984391 ACATTTATATGTTGTCTGCATCGAAA 58.016 30.769 0.00 0.00 42.29 3.46
350 351 8.623903 ACATTTATATGTTGTCTGCATCGAAAT 58.376 29.630 0.00 0.00 42.29 2.17
351 352 9.110617 CATTTATATGTTGTCTGCATCGAAATC 57.889 33.333 0.00 0.00 0.00 2.17
352 353 8.437360 TTTATATGTTGTCTGCATCGAAATCT 57.563 30.769 0.00 0.00 0.00 2.40
353 354 4.871993 ATGTTGTCTGCATCGAAATCTC 57.128 40.909 0.00 0.00 0.00 2.75
354 355 3.002791 TGTTGTCTGCATCGAAATCTCC 58.997 45.455 0.00 0.00 0.00 3.71
355 356 3.002791 GTTGTCTGCATCGAAATCTCCA 58.997 45.455 0.00 0.00 0.00 3.86
356 357 3.333029 TGTCTGCATCGAAATCTCCAA 57.667 42.857 0.00 0.00 0.00 3.53
357 358 3.264947 TGTCTGCATCGAAATCTCCAAG 58.735 45.455 0.00 0.00 0.00 3.61
358 359 3.055891 TGTCTGCATCGAAATCTCCAAGA 60.056 43.478 0.00 0.00 0.00 3.02
359 360 3.555139 GTCTGCATCGAAATCTCCAAGAG 59.445 47.826 0.00 0.00 0.00 2.85
360 361 2.871022 CTGCATCGAAATCTCCAAGAGG 59.129 50.000 0.00 0.00 0.00 3.69
361 362 2.501316 TGCATCGAAATCTCCAAGAGGA 59.499 45.455 0.00 0.00 43.21 3.71
362 363 2.869192 GCATCGAAATCTCCAAGAGGAC 59.131 50.000 0.00 0.00 39.61 3.85
363 364 3.431486 GCATCGAAATCTCCAAGAGGACT 60.431 47.826 0.00 0.00 39.61 3.85
364 365 4.764172 CATCGAAATCTCCAAGAGGACTT 58.236 43.478 0.00 0.00 39.61 3.01
365 366 5.682471 GCATCGAAATCTCCAAGAGGACTTA 60.682 44.000 0.00 0.00 39.61 2.24
366 367 6.520272 CATCGAAATCTCCAAGAGGACTTAT 58.480 40.000 0.00 0.00 39.61 1.73
367 368 7.661968 CATCGAAATCTCCAAGAGGACTTATA 58.338 38.462 0.00 0.00 39.61 0.98
368 369 7.841282 TCGAAATCTCCAAGAGGACTTATAT 57.159 36.000 0.00 0.00 39.61 0.86
369 370 8.251383 TCGAAATCTCCAAGAGGACTTATATT 57.749 34.615 0.00 0.00 39.61 1.28
370 371 8.705594 TCGAAATCTCCAAGAGGACTTATATTT 58.294 33.333 0.00 0.00 39.61 1.40
371 372 9.982651 CGAAATCTCCAAGAGGACTTATATTTA 57.017 33.333 0.00 0.00 39.61 1.40
382 383 8.885346 AGAGGACTTATATTTAGAAATGGAGGG 58.115 37.037 0.00 0.00 0.00 4.30
383 384 8.814448 AGGACTTATATTTAGAAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
384 385 8.885346 AGGACTTATATTTAGAAATGGAGGGAG 58.115 37.037 0.00 0.00 0.00 4.30
385 386 8.661345 GGACTTATATTTAGAAATGGAGGGAGT 58.339 37.037 0.00 0.00 0.00 3.85
386 387 9.495572 GACTTATATTTAGAAATGGAGGGAGTG 57.504 37.037 0.00 0.00 0.00 3.51
387 388 7.939588 ACTTATATTTAGAAATGGAGGGAGTGC 59.060 37.037 0.00 0.00 0.00 4.40
388 389 4.591321 ATTTAGAAATGGAGGGAGTGCA 57.409 40.909 0.00 0.00 0.00 4.57
389 390 4.591321 TTTAGAAATGGAGGGAGTGCAT 57.409 40.909 0.00 0.00 39.29 3.96
390 391 2.431954 AGAAATGGAGGGAGTGCATG 57.568 50.000 0.00 0.00 37.28 4.06
391 392 0.743097 GAAATGGAGGGAGTGCATGC 59.257 55.000 11.82 11.82 37.28 4.06
392 393 0.333993 AAATGGAGGGAGTGCATGCT 59.666 50.000 20.33 0.00 37.28 3.79
393 394 0.333993 AATGGAGGGAGTGCATGCTT 59.666 50.000 20.33 7.15 37.28 3.91
394 395 0.106819 ATGGAGGGAGTGCATGCTTC 60.107 55.000 20.33 15.81 35.52 3.86
395 396 1.300963 GGAGGGAGTGCATGCTTCA 59.699 57.895 20.33 0.00 0.00 3.02
396 397 0.106819 GGAGGGAGTGCATGCTTCAT 60.107 55.000 20.33 8.99 0.00 2.57
397 398 1.307097 GAGGGAGTGCATGCTTCATC 58.693 55.000 20.33 13.51 0.00 2.92
398 399 0.622136 AGGGAGTGCATGCTTCATCA 59.378 50.000 20.33 0.00 0.00 3.07
399 400 0.737219 GGGAGTGCATGCTTCATCAC 59.263 55.000 20.33 7.39 0.00 3.06
400 401 1.681166 GGGAGTGCATGCTTCATCACT 60.681 52.381 20.33 12.60 36.10 3.41
401 402 2.089980 GGAGTGCATGCTTCATCACTT 58.910 47.619 20.33 0.00 34.76 3.16
402 403 2.097142 GGAGTGCATGCTTCATCACTTC 59.903 50.000 20.33 7.70 34.76 3.01
403 404 3.008330 GAGTGCATGCTTCATCACTTCT 58.992 45.455 20.33 1.89 34.76 2.85
404 405 3.008330 AGTGCATGCTTCATCACTTCTC 58.992 45.455 20.33 0.00 32.62 2.87
405 406 3.008330 GTGCATGCTTCATCACTTCTCT 58.992 45.455 20.33 0.00 0.00 3.10
406 407 3.007635 TGCATGCTTCATCACTTCTCTG 58.992 45.455 20.33 0.00 0.00 3.35
407 408 2.223294 GCATGCTTCATCACTTCTCTGC 60.223 50.000 11.37 0.00 0.00 4.26
408 409 2.105006 TGCTTCATCACTTCTCTGCC 57.895 50.000 0.00 0.00 0.00 4.85
409 410 1.348696 TGCTTCATCACTTCTCTGCCA 59.651 47.619 0.00 0.00 0.00 4.92
410 411 1.736681 GCTTCATCACTTCTCTGCCAC 59.263 52.381 0.00 0.00 0.00 5.01
411 412 2.614987 GCTTCATCACTTCTCTGCCACT 60.615 50.000 0.00 0.00 0.00 4.00
412 413 3.260740 CTTCATCACTTCTCTGCCACTC 58.739 50.000 0.00 0.00 0.00 3.51
413 414 2.250924 TCATCACTTCTCTGCCACTCA 58.749 47.619 0.00 0.00 0.00 3.41
414 415 2.836372 TCATCACTTCTCTGCCACTCAT 59.164 45.455 0.00 0.00 0.00 2.90
415 416 4.026052 TCATCACTTCTCTGCCACTCATA 58.974 43.478 0.00 0.00 0.00 2.15
416 417 4.652881 TCATCACTTCTCTGCCACTCATAT 59.347 41.667 0.00 0.00 0.00 1.78
417 418 5.835280 TCATCACTTCTCTGCCACTCATATA 59.165 40.000 0.00 0.00 0.00 0.86
418 419 5.521906 TCACTTCTCTGCCACTCATATAC 57.478 43.478 0.00 0.00 0.00 1.47
419 420 4.342378 TCACTTCTCTGCCACTCATATACC 59.658 45.833 0.00 0.00 0.00 2.73
420 421 3.319405 ACTTCTCTGCCACTCATATACCG 59.681 47.826 0.00 0.00 0.00 4.02
421 422 3.223674 TCTCTGCCACTCATATACCGA 57.776 47.619 0.00 0.00 0.00 4.69
422 423 3.767711 TCTCTGCCACTCATATACCGAT 58.232 45.455 0.00 0.00 0.00 4.18
423 424 3.759086 TCTCTGCCACTCATATACCGATC 59.241 47.826 0.00 0.00 0.00 3.69
424 425 2.826128 TCTGCCACTCATATACCGATCC 59.174 50.000 0.00 0.00 0.00 3.36
425 426 2.562738 CTGCCACTCATATACCGATCCA 59.437 50.000 0.00 0.00 0.00 3.41
426 427 2.969262 TGCCACTCATATACCGATCCAA 59.031 45.455 0.00 0.00 0.00 3.53
427 428 3.389656 TGCCACTCATATACCGATCCAAA 59.610 43.478 0.00 0.00 0.00 3.28
428 429 4.141597 TGCCACTCATATACCGATCCAAAA 60.142 41.667 0.00 0.00 0.00 2.44
429 430 5.003804 GCCACTCATATACCGATCCAAAAT 58.996 41.667 0.00 0.00 0.00 1.82
430 431 5.473504 GCCACTCATATACCGATCCAAAATT 59.526 40.000 0.00 0.00 0.00 1.82
431 432 6.016276 GCCACTCATATACCGATCCAAAATTT 60.016 38.462 0.00 0.00 0.00 1.82
432 433 7.584987 CCACTCATATACCGATCCAAAATTTC 58.415 38.462 0.00 0.00 0.00 2.17
433 434 7.445402 CCACTCATATACCGATCCAAAATTTCT 59.555 37.037 0.00 0.00 0.00 2.52
434 435 8.840321 CACTCATATACCGATCCAAAATTTCTT 58.160 33.333 0.00 0.00 0.00 2.52
435 436 9.057089 ACTCATATACCGATCCAAAATTTCTTC 57.943 33.333 0.00 0.00 0.00 2.87
436 437 9.277783 CTCATATACCGATCCAAAATTTCTTCT 57.722 33.333 0.00 0.00 0.00 2.85
437 438 9.273016 TCATATACCGATCCAAAATTTCTTCTC 57.727 33.333 0.00 0.00 0.00 2.87
438 439 9.277783 CATATACCGATCCAAAATTTCTTCTCT 57.722 33.333 0.00 0.00 0.00 3.10
439 440 9.853177 ATATACCGATCCAAAATTTCTTCTCTT 57.147 29.630 0.00 0.00 0.00 2.85
441 442 7.379098 ACCGATCCAAAATTTCTTCTCTTAC 57.621 36.000 0.00 0.00 0.00 2.34
442 443 6.940298 ACCGATCCAAAATTTCTTCTCTTACA 59.060 34.615 0.00 0.00 0.00 2.41
443 444 7.119846 ACCGATCCAAAATTTCTTCTCTTACAG 59.880 37.037 0.00 0.00 0.00 2.74
444 445 6.963805 CGATCCAAAATTTCTTCTCTTACAGC 59.036 38.462 0.00 0.00 0.00 4.40
445 446 6.575162 TCCAAAATTTCTTCTCTTACAGCC 57.425 37.500 0.00 0.00 0.00 4.85
446 447 5.181245 TCCAAAATTTCTTCTCTTACAGCCG 59.819 40.000 0.00 0.00 0.00 5.52
447 448 5.181245 CCAAAATTTCTTCTCTTACAGCCGA 59.819 40.000 0.00 0.00 0.00 5.54
448 449 6.293955 CCAAAATTTCTTCTCTTACAGCCGAA 60.294 38.462 0.00 0.00 0.00 4.30
449 450 6.877611 AAATTTCTTCTCTTACAGCCGAAA 57.122 33.333 0.00 0.00 0.00 3.46
450 451 5.864628 ATTTCTTCTCTTACAGCCGAAAC 57.135 39.130 0.00 0.00 0.00 2.78
451 452 2.942710 TCTTCTCTTACAGCCGAAACG 58.057 47.619 0.00 0.00 0.00 3.60
452 453 2.555325 TCTTCTCTTACAGCCGAAACGA 59.445 45.455 0.00 0.00 0.00 3.85
453 454 3.192844 TCTTCTCTTACAGCCGAAACGAT 59.807 43.478 0.00 0.00 0.00 3.73
454 455 3.587797 TCTCTTACAGCCGAAACGATT 57.412 42.857 0.00 0.00 0.00 3.34
455 456 3.250744 TCTCTTACAGCCGAAACGATTG 58.749 45.455 0.00 0.00 0.00 2.67
456 457 3.057104 TCTCTTACAGCCGAAACGATTGA 60.057 43.478 0.00 0.00 0.00 2.57
457 458 3.250744 TCTTACAGCCGAAACGATTGAG 58.749 45.455 0.00 0.00 0.00 3.02
458 459 3.057104 TCTTACAGCCGAAACGATTGAGA 60.057 43.478 0.00 0.00 0.00 3.27
459 460 2.386661 ACAGCCGAAACGATTGAGAT 57.613 45.000 0.00 0.00 0.00 2.75
460 461 2.002586 ACAGCCGAAACGATTGAGATG 58.997 47.619 0.00 0.00 0.00 2.90
461 462 2.002586 CAGCCGAAACGATTGAGATGT 58.997 47.619 0.00 0.00 0.00 3.06
462 463 3.186909 CAGCCGAAACGATTGAGATGTA 58.813 45.455 0.00 0.00 0.00 2.29
463 464 3.804325 CAGCCGAAACGATTGAGATGTAT 59.196 43.478 0.00 0.00 0.00 2.29
464 465 4.271049 CAGCCGAAACGATTGAGATGTATT 59.729 41.667 0.00 0.00 0.00 1.89
465 466 4.271049 AGCCGAAACGATTGAGATGTATTG 59.729 41.667 0.00 0.00 0.00 1.90
466 467 4.034048 GCCGAAACGATTGAGATGTATTGT 59.966 41.667 0.00 0.00 0.00 2.71
467 468 5.447279 GCCGAAACGATTGAGATGTATTGTT 60.447 40.000 0.00 0.00 31.29 2.83
468 469 5.959527 CCGAAACGATTGAGATGTATTGTTG 59.040 40.000 0.00 0.00 30.64 3.33
469 470 6.183360 CCGAAACGATTGAGATGTATTGTTGA 60.183 38.462 0.00 0.00 30.64 3.18
470 471 7.233689 CGAAACGATTGAGATGTATTGTTGAA 58.766 34.615 0.00 0.00 30.64 2.69
471 472 7.904977 CGAAACGATTGAGATGTATTGTTGAAT 59.095 33.333 0.00 0.00 30.64 2.57
591 601 5.882557 TCATCAAGAAAATAGGTGCTTCTCC 59.117 40.000 0.00 0.00 0.00 3.71
610 620 3.971150 TCCGCATTTTGTTTAAGGTGTG 58.029 40.909 0.00 0.00 0.00 3.82
613 623 3.182173 CGCATTTTGTTTAAGGTGTGCTG 59.818 43.478 0.00 0.00 0.00 4.41
614 624 4.119136 GCATTTTGTTTAAGGTGTGCTGT 58.881 39.130 0.00 0.00 0.00 4.40
615 625 5.285651 GCATTTTGTTTAAGGTGTGCTGTA 58.714 37.500 0.00 0.00 0.00 2.74
619 631 9.638239 CATTTTGTTTAAGGTGTGCTGTATAAT 57.362 29.630 0.00 0.00 0.00 1.28
624 636 4.771114 AAGGTGTGCTGTATAATAGGCA 57.229 40.909 0.00 0.00 0.00 4.75
778 827 8.366401 TCCAACAATATATTTGCATATGTTGGG 58.634 33.333 27.41 16.21 43.68 4.12
843 1123 5.006552 CCGAAACAAAATTCATGTGTGCTTT 59.993 36.000 0.00 0.00 0.00 3.51
847 1127 8.891671 AAACAAAATTCATGTGTGCTTTCTAT 57.108 26.923 0.00 0.00 0.00 1.98
849 1129 9.979578 AACAAAATTCATGTGTGCTTTCTATTA 57.020 25.926 0.00 0.00 0.00 0.98
891 1174 6.919721 TCCTTAACAACATAATTGCAGAACC 58.080 36.000 0.00 0.00 0.00 3.62
892 1175 5.799936 CCTTAACAACATAATTGCAGAACCG 59.200 40.000 0.00 0.00 0.00 4.44
922 1206 0.249531 CATCTGAGATCAGCAGCGCT 60.250 55.000 2.64 2.64 43.46 5.92
932 1216 0.231534 CAGCAGCGCTTGTATCATCG 59.768 55.000 7.50 0.00 36.40 3.84
942 1226 3.731867 GCTTGTATCATCGTTGCCTTTGG 60.732 47.826 0.00 0.00 0.00 3.28
957 1241 0.110486 TTTGGTTGCCCAGAGGAGTC 59.890 55.000 0.00 0.00 43.15 3.36
971 1279 0.179040 GGAGTCGACCACCCAAACAA 60.179 55.000 13.01 0.00 0.00 2.83
974 1289 2.225727 GAGTCGACCACCCAAACAATTC 59.774 50.000 13.01 0.00 0.00 2.17
1049 1364 0.108138 ACTACATCTTCAGGCCACGC 60.108 55.000 5.01 0.00 0.00 5.34
1090 1413 5.123186 TGATTGCCTGTTTTCAATACCGTAG 59.877 40.000 0.00 0.00 33.49 3.51
1099 1422 8.385898 TGTTTTCAATACCGTAGTCTTTGAAT 57.614 30.769 6.08 0.00 37.73 2.57
1237 1561 4.067896 AGCTGGACGGCATCAATTATAAG 58.932 43.478 5.85 0.00 34.17 1.73
1291 1615 2.550180 CGTCAGACAGAGACAAGACAGA 59.450 50.000 0.41 0.00 35.77 3.41
1312 1636 4.400251 AGATGCACAACCACATGATAAAGG 59.600 41.667 0.00 0.00 0.00 3.11
1388 1712 1.372582 TGCTTGACCTCATTGATCGC 58.627 50.000 0.00 0.00 0.00 4.58
1422 1746 1.745827 GCCATAAGGAACAAGCGGCTA 60.746 52.381 1.35 0.00 36.89 3.93
1718 2061 8.920509 AAACAACTACCAACTTTAATTGTGTC 57.079 30.769 0.00 0.00 0.00 3.67
1765 2108 4.829492 AGAAATGAAGGAGTTGGTGGAAAG 59.171 41.667 0.00 0.00 0.00 2.62
1821 2167 5.642919 ACTGAAAGCAAAGCAAAAATGACAA 59.357 32.000 0.00 0.00 37.60 3.18
1991 2344 3.555168 CGAAAGCGATTATAGAGGGCCTT 60.555 47.826 7.89 0.00 40.82 4.35
2191 2554 4.715534 TTTTGGTCACCACTAGATTCCA 57.284 40.909 0.00 0.00 30.78 3.53
2195 2558 2.431057 GGTCACCACTAGATTCCACGAT 59.569 50.000 0.00 0.00 0.00 3.73
2317 2687 2.325583 TCTTGCAACGACCAGAAGTT 57.674 45.000 0.00 0.00 0.00 2.66
2320 2690 3.994392 TCTTGCAACGACCAGAAGTTATC 59.006 43.478 0.00 0.00 0.00 1.75
2325 2695 2.444421 ACGACCAGAAGTTATCGGAGT 58.556 47.619 0.00 0.00 38.88 3.85
2326 2696 2.824341 ACGACCAGAAGTTATCGGAGTT 59.176 45.455 0.00 0.00 38.88 3.01
2327 2697 3.179830 CGACCAGAAGTTATCGGAGTTG 58.820 50.000 0.00 0.00 0.00 3.16
2328 2698 3.119602 CGACCAGAAGTTATCGGAGTTGA 60.120 47.826 0.00 0.00 0.00 3.18
2329 2699 4.617530 CGACCAGAAGTTATCGGAGTTGAA 60.618 45.833 0.00 0.00 0.00 2.69
2330 2700 4.822026 ACCAGAAGTTATCGGAGTTGAAG 58.178 43.478 0.00 0.00 0.00 3.02
2349 2725 2.710377 AGCGCATTGGTGAAGACATTA 58.290 42.857 11.47 0.00 0.00 1.90
2360 2736 8.698973 TTGGTGAAGACATTATTCCAAAGTTA 57.301 30.769 0.00 0.00 31.82 2.24
3116 3597 3.531934 TGTCGTCTGCATCATCTGAAT 57.468 42.857 0.00 0.00 0.00 2.57
3178 3659 2.093075 CAGGCTTCAGTGATGTCCTCAT 60.093 50.000 14.80 0.00 35.97 2.90
3286 3776 1.480954 TCCTGAGGCGGTGAAGATAAC 59.519 52.381 0.00 0.00 0.00 1.89
3340 3830 5.127682 GGAATCTCCAACATTTGCAGGTAAT 59.872 40.000 0.00 0.00 36.28 1.89
3349 3839 4.705023 ACATTTGCAGGTAATTGACTACCC 59.295 41.667 0.00 0.00 42.15 3.69
3367 3857 2.572104 ACCCAGGTGAATCTTGTCCTAC 59.428 50.000 0.00 0.00 0.00 3.18
3410 3900 2.737252 GCCAAGGTTACGTTCTCTTGAG 59.263 50.000 19.20 13.00 38.96 3.02
3423 4425 7.431249 ACGTTCTCTTGAGTTTACAGATTGTA 58.569 34.615 0.00 0.00 0.00 2.41
3442 5877 8.263640 AGATTGTATCAACTTGAAGAGCATACT 58.736 33.333 0.00 0.00 0.00 2.12
3534 5972 8.939201 AGAGTTAGTCATAACAAGATGTGATG 57.061 34.615 1.98 1.98 43.21 3.07
3663 6101 6.139679 TCACCTCCCTCACTTATTTGAAAT 57.860 37.500 0.00 0.00 0.00 2.17
3665 6103 7.010160 TCACCTCCCTCACTTATTTGAAATTT 58.990 34.615 0.00 0.00 0.00 1.82
3666 6104 7.508977 TCACCTCCCTCACTTATTTGAAATTTT 59.491 33.333 0.00 0.00 0.00 1.82
3695 6133 1.751924 GACTCGTTGACAGCTATCCCT 59.248 52.381 0.00 0.00 0.00 4.20
4008 6466 7.550906 AGTTGACAATTAGAGGTTCTGATAAGC 59.449 37.037 0.00 0.00 0.00 3.09
4022 6486 7.256119 GGTTCTGATAAGCTCAATATGGAGAGA 60.256 40.741 11.59 0.83 37.05 3.10
4039 6503 6.470278 TGGAGAGAGCAATGATATTACCATG 58.530 40.000 0.00 0.00 0.00 3.66
4273 6884 6.170506 TCTTTCACTGGTATGTACAATGACC 58.829 40.000 14.89 14.89 0.00 4.02
4299 6910 7.257722 GGCAATTTAACTACTGTATGCACATT 58.742 34.615 8.90 0.00 33.14 2.71
4352 6968 6.413052 AGCTGCATGTTAATCTCCCTATATG 58.587 40.000 1.02 0.00 0.00 1.78
4398 7014 6.043358 ACCTAGATCCTTAAGCTCATTAACCC 59.957 42.308 0.00 0.00 30.16 4.11
4413 7029 7.366847 TCATTAACCCTTTTCATTTGTCCAA 57.633 32.000 0.00 0.00 0.00 3.53
4417 7033 4.810345 ACCCTTTTCATTTGTCCAACCTA 58.190 39.130 0.00 0.00 0.00 3.08
4490 7106 1.466167 CCGCCTTCATTGAGAACACAG 59.534 52.381 0.00 0.00 31.61 3.66
4491 7107 2.146342 CGCCTTCATTGAGAACACAGT 58.854 47.619 0.00 0.00 31.61 3.55
4500 7116 2.526432 TGAGAACACAGTCTAGGGGAC 58.474 52.381 0.00 0.00 44.80 4.46
4520 7136 5.990386 GGGACCCTATAATCTCGTTTTCTTC 59.010 44.000 2.09 0.00 0.00 2.87
4544 7175 2.874648 GATGGATGTCGTGCAGGGCA 62.875 60.000 16.95 16.95 35.60 5.36
4574 7210 5.300792 AGGAGTGCGAGGAAAACAAATTAAA 59.699 36.000 0.00 0.00 0.00 1.52
4588 7242 7.533289 AACAAATTAAAGGGCTTGCTAGTAA 57.467 32.000 0.00 0.00 0.00 2.24
4603 7259 9.046296 GCTTGCTAGTAACATGTATCAACTATT 57.954 33.333 0.00 0.00 0.00 1.73
4658 7352 2.930950 TCCTGCATTTCTATTTCCCCG 58.069 47.619 0.00 0.00 0.00 5.73
4710 7421 8.658499 ATCCAACTTATTTACCGTATCTTCAC 57.342 34.615 0.00 0.00 0.00 3.18
4778 7491 8.246180 ACATGACAATTCCTGCTTGTTATTTAG 58.754 33.333 0.00 0.00 36.98 1.85
4848 7650 7.141363 GTGTCTTTTGCTAATTCTGTGATTGT 58.859 34.615 0.00 0.00 0.00 2.71
4961 7763 6.488006 TCCTCCGTAAACTAATATAAGAGCGT 59.512 38.462 0.00 0.00 0.00 5.07
4963 7765 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
4964 7766 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
4965 7767 9.450807 TCCGTAAACTAATATAAGAGCGTTTAC 57.549 33.333 10.96 10.96 41.12 2.01
4966 7768 9.236691 CCGTAAACTAATATAAGAGCGTTTACA 57.763 33.333 17.54 0.00 43.00 2.41
4972 7774 9.426837 ACTAATATAAGAGCGTTTACAAACACA 57.573 29.630 5.74 0.00 38.81 3.72
5065 8160 0.604511 AGTTACCGTTTGGGCCGAAG 60.605 55.000 6.41 0.00 40.62 3.79
5082 8177 2.340873 CGAAGCTGATCGCGATTATGAG 59.659 50.000 24.55 16.73 45.59 2.90
5092 8187 2.029020 CGCGATTATGAGAGGGATGGAA 60.029 50.000 0.00 0.00 0.00 3.53
5338 8455 7.666623 TCATCTCAAATACAGTACACAGACAA 58.333 34.615 0.00 0.00 0.00 3.18
5395 9994 3.542310 CGCTTTTAATTACAAGCCTTCGC 59.458 43.478 23.90 6.03 42.15 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.153107 CGAGAGGATGCCAATGCCA 60.153 57.895 0.00 0.00 36.33 4.92
2 3 1.153086 ACGAGAGGATGCCAATGCC 60.153 57.895 0.00 0.00 36.33 4.40
3 4 0.179062 AGACGAGAGGATGCCAATGC 60.179 55.000 0.00 0.00 38.26 3.56
4 5 1.539929 GGAGACGAGAGGATGCCAATG 60.540 57.143 0.00 0.00 0.00 2.82
6 7 0.324738 AGGAGACGAGAGGATGCCAA 60.325 55.000 0.00 0.00 0.00 4.52
8 9 0.103937 CAAGGAGACGAGAGGATGCC 59.896 60.000 0.00 0.00 0.00 4.40
10 11 1.769026 TCCAAGGAGACGAGAGGATG 58.231 55.000 0.00 0.00 0.00 3.51
11 12 2.765689 ATCCAAGGAGACGAGAGGAT 57.234 50.000 0.00 0.00 0.00 3.24
12 13 2.750135 GCTATCCAAGGAGACGAGAGGA 60.750 54.545 0.00 0.00 0.00 3.71
13 14 1.611491 GCTATCCAAGGAGACGAGAGG 59.389 57.143 0.00 0.00 0.00 3.69
14 15 2.582052 AGCTATCCAAGGAGACGAGAG 58.418 52.381 0.00 0.00 0.00 3.20
15 16 2.738587 AGCTATCCAAGGAGACGAGA 57.261 50.000 0.00 0.00 0.00 4.04
16 17 5.883115 TCATATAGCTATCCAAGGAGACGAG 59.117 44.000 10.16 0.00 0.00 4.18
17 18 5.648526 GTCATATAGCTATCCAAGGAGACGA 59.351 44.000 10.16 0.00 0.00 4.20
18 19 5.163602 GGTCATATAGCTATCCAAGGAGACG 60.164 48.000 10.16 0.00 0.00 4.18
19 20 5.955355 AGGTCATATAGCTATCCAAGGAGAC 59.045 44.000 10.16 8.57 32.98 3.36
20 21 6.159172 AGGTCATATAGCTATCCAAGGAGA 57.841 41.667 10.16 0.00 32.98 3.71
21 22 6.865834 AAGGTCATATAGCTATCCAAGGAG 57.134 41.667 10.16 0.00 33.87 3.69
22 23 6.787458 TCAAAGGTCATATAGCTATCCAAGGA 59.213 38.462 10.16 0.00 33.87 3.36
23 24 6.876257 GTCAAAGGTCATATAGCTATCCAAGG 59.124 42.308 10.16 0.00 33.87 3.61
24 25 6.876257 GGTCAAAGGTCATATAGCTATCCAAG 59.124 42.308 10.16 0.00 33.87 3.61
25 26 6.558775 AGGTCAAAGGTCATATAGCTATCCAA 59.441 38.462 10.16 0.00 33.87 3.53
26 27 6.014242 CAGGTCAAAGGTCATATAGCTATCCA 60.014 42.308 10.16 0.00 33.87 3.41
27 28 6.402222 CAGGTCAAAGGTCATATAGCTATCC 58.598 44.000 10.16 5.25 33.87 2.59
28 29 6.211584 TCCAGGTCAAAGGTCATATAGCTATC 59.788 42.308 10.16 0.00 33.87 2.08
29 30 6.084738 TCCAGGTCAAAGGTCATATAGCTAT 58.915 40.000 11.77 11.77 33.87 2.97
30 31 5.464069 TCCAGGTCAAAGGTCATATAGCTA 58.536 41.667 0.00 0.00 33.87 3.32
31 32 4.298626 TCCAGGTCAAAGGTCATATAGCT 58.701 43.478 0.00 0.00 37.60 3.32
32 33 4.689612 TCCAGGTCAAAGGTCATATAGC 57.310 45.455 0.00 0.00 0.00 2.97
33 34 6.042552 AGTCATCCAGGTCAAAGGTCATATAG 59.957 42.308 0.00 0.00 0.00 1.31
34 35 5.905331 AGTCATCCAGGTCAAAGGTCATATA 59.095 40.000 0.00 0.00 0.00 0.86
35 36 4.723789 AGTCATCCAGGTCAAAGGTCATAT 59.276 41.667 0.00 0.00 0.00 1.78
36 37 4.104086 AGTCATCCAGGTCAAAGGTCATA 58.896 43.478 0.00 0.00 0.00 2.15
37 38 2.915604 AGTCATCCAGGTCAAAGGTCAT 59.084 45.455 0.00 0.00 0.00 3.06
38 39 2.338809 AGTCATCCAGGTCAAAGGTCA 58.661 47.619 0.00 0.00 0.00 4.02
39 40 3.244561 TGAAGTCATCCAGGTCAAAGGTC 60.245 47.826 0.00 0.00 0.00 3.85
40 41 2.711009 TGAAGTCATCCAGGTCAAAGGT 59.289 45.455 0.00 0.00 0.00 3.50
41 42 3.423539 TGAAGTCATCCAGGTCAAAGG 57.576 47.619 0.00 0.00 0.00 3.11
42 43 3.503748 GGTTGAAGTCATCCAGGTCAAAG 59.496 47.826 3.91 0.00 36.11 2.77
43 44 3.486383 GGTTGAAGTCATCCAGGTCAAA 58.514 45.455 3.91 0.00 36.11 2.69
44 45 2.224769 GGGTTGAAGTCATCCAGGTCAA 60.225 50.000 9.96 0.00 37.44 3.18
45 46 1.351017 GGGTTGAAGTCATCCAGGTCA 59.649 52.381 9.96 0.00 37.44 4.02
46 47 1.351017 TGGGTTGAAGTCATCCAGGTC 59.649 52.381 9.96 0.00 37.44 3.85
47 48 1.073923 GTGGGTTGAAGTCATCCAGGT 59.926 52.381 9.96 0.00 37.44 4.00
48 49 1.352352 AGTGGGTTGAAGTCATCCAGG 59.648 52.381 9.96 0.00 37.44 4.45
49 50 2.867109 AGTGGGTTGAAGTCATCCAG 57.133 50.000 9.96 0.00 37.44 3.86
50 51 3.199946 GGATAGTGGGTTGAAGTCATCCA 59.800 47.826 9.96 5.54 37.44 3.41
51 52 3.741388 CGGATAGTGGGTTGAAGTCATCC 60.741 52.174 0.44 0.44 35.49 3.51
52 53 3.458189 CGGATAGTGGGTTGAAGTCATC 58.542 50.000 0.00 0.00 0.00 2.92
53 54 2.170607 CCGGATAGTGGGTTGAAGTCAT 59.829 50.000 0.00 0.00 0.00 3.06
54 55 1.553248 CCGGATAGTGGGTTGAAGTCA 59.447 52.381 0.00 0.00 0.00 3.41
55 56 1.553704 ACCGGATAGTGGGTTGAAGTC 59.446 52.381 9.46 0.00 30.73 3.01
56 57 1.652947 ACCGGATAGTGGGTTGAAGT 58.347 50.000 9.46 0.00 30.73 3.01
57 58 2.027561 TGAACCGGATAGTGGGTTGAAG 60.028 50.000 9.46 0.00 46.16 3.02
58 59 1.979308 TGAACCGGATAGTGGGTTGAA 59.021 47.619 9.46 0.00 46.16 2.69
59 60 1.553248 CTGAACCGGATAGTGGGTTGA 59.447 52.381 9.46 0.00 46.16 3.18
60 61 1.553248 TCTGAACCGGATAGTGGGTTG 59.447 52.381 9.46 0.00 46.16 3.77
62 63 2.040178 GATCTGAACCGGATAGTGGGT 58.960 52.381 9.46 0.00 38.44 4.51
63 64 2.320781 AGATCTGAACCGGATAGTGGG 58.679 52.381 9.46 0.00 28.51 4.61
64 65 4.585162 AGTTAGATCTGAACCGGATAGTGG 59.415 45.833 9.46 0.00 28.51 4.00
65 66 5.278561 GGAGTTAGATCTGAACCGGATAGTG 60.279 48.000 9.46 0.00 28.51 2.74
66 67 4.828387 GGAGTTAGATCTGAACCGGATAGT 59.172 45.833 9.46 0.00 28.51 2.12
67 68 4.218852 GGGAGTTAGATCTGAACCGGATAG 59.781 50.000 9.46 2.86 28.51 2.08
68 69 4.150359 GGGAGTTAGATCTGAACCGGATA 58.850 47.826 9.46 0.00 28.51 2.59
69 70 2.966516 GGGAGTTAGATCTGAACCGGAT 59.033 50.000 9.46 0.00 31.40 4.18
70 71 2.385803 GGGAGTTAGATCTGAACCGGA 58.614 52.381 9.46 0.00 0.00 5.14
71 72 1.413077 GGGGAGTTAGATCTGAACCGG 59.587 57.143 5.18 0.00 0.00 5.28
72 73 2.101582 CTGGGGAGTTAGATCTGAACCG 59.898 54.545 5.18 0.00 0.00 4.44
73 74 2.436173 CCTGGGGAGTTAGATCTGAACC 59.564 54.545 5.18 4.55 0.00 3.62
74 75 2.158885 GCCTGGGGAGTTAGATCTGAAC 60.159 54.545 5.18 6.26 0.00 3.18
75 76 2.119495 GCCTGGGGAGTTAGATCTGAA 58.881 52.381 5.18 0.00 0.00 3.02
76 77 1.692762 GGCCTGGGGAGTTAGATCTGA 60.693 57.143 5.18 0.00 0.00 3.27
77 78 0.761802 GGCCTGGGGAGTTAGATCTG 59.238 60.000 5.18 0.00 0.00 2.90
78 79 0.400670 GGGCCTGGGGAGTTAGATCT 60.401 60.000 0.84 0.00 0.00 2.75
79 80 1.419720 GGGGCCTGGGGAGTTAGATC 61.420 65.000 0.84 0.00 0.00 2.75
80 81 1.386057 GGGGCCTGGGGAGTTAGAT 60.386 63.158 0.84 0.00 0.00 1.98
81 82 2.042261 GGGGCCTGGGGAGTTAGA 59.958 66.667 0.84 0.00 0.00 2.10
82 83 3.097162 GGGGGCCTGGGGAGTTAG 61.097 72.222 0.84 0.00 0.00 2.34
136 137 4.851179 GGGGTTGCGGACGGGATC 62.851 72.222 0.00 0.00 0.00 3.36
146 147 2.934876 ATAGGAGGGGAGGGGGTTGC 62.935 65.000 0.00 0.00 0.00 4.17
147 148 0.768609 GATAGGAGGGGAGGGGGTTG 60.769 65.000 0.00 0.00 0.00 3.77
148 149 0.942040 AGATAGGAGGGGAGGGGGTT 60.942 60.000 0.00 0.00 0.00 4.11
149 150 0.942040 AAGATAGGAGGGGAGGGGGT 60.942 60.000 0.00 0.00 0.00 4.95
150 151 0.178888 GAAGATAGGAGGGGAGGGGG 60.179 65.000 0.00 0.00 0.00 5.40
151 152 0.871024 AGAAGATAGGAGGGGAGGGG 59.129 60.000 0.00 0.00 0.00 4.79
152 153 2.225420 GGTAGAAGATAGGAGGGGAGGG 60.225 59.091 0.00 0.00 0.00 4.30
153 154 2.725227 AGGTAGAAGATAGGAGGGGAGG 59.275 54.545 0.00 0.00 0.00 4.30
154 155 3.245479 GGAGGTAGAAGATAGGAGGGGAG 60.245 56.522 0.00 0.00 0.00 4.30
155 156 2.723010 GGAGGTAGAAGATAGGAGGGGA 59.277 54.545 0.00 0.00 0.00 4.81
156 157 2.225420 GGGAGGTAGAAGATAGGAGGGG 60.225 59.091 0.00 0.00 0.00 4.79
157 158 2.451273 TGGGAGGTAGAAGATAGGAGGG 59.549 54.545 0.00 0.00 0.00 4.30
158 159 3.773560 CTGGGAGGTAGAAGATAGGAGG 58.226 54.545 0.00 0.00 0.00 4.30
159 160 3.161866 GCTGGGAGGTAGAAGATAGGAG 58.838 54.545 0.00 0.00 0.00 3.69
160 161 2.158295 GGCTGGGAGGTAGAAGATAGGA 60.158 54.545 0.00 0.00 0.00 2.94
161 162 2.252714 GGCTGGGAGGTAGAAGATAGG 58.747 57.143 0.00 0.00 0.00 2.57
162 163 2.630580 GTGGCTGGGAGGTAGAAGATAG 59.369 54.545 0.00 0.00 0.00 2.08
163 164 2.679082 GTGGCTGGGAGGTAGAAGATA 58.321 52.381 0.00 0.00 0.00 1.98
164 165 1.501582 GTGGCTGGGAGGTAGAAGAT 58.498 55.000 0.00 0.00 0.00 2.40
165 166 0.617820 GGTGGCTGGGAGGTAGAAGA 60.618 60.000 0.00 0.00 0.00 2.87
166 167 1.908483 GGTGGCTGGGAGGTAGAAG 59.092 63.158 0.00 0.00 0.00 2.85
167 168 1.987855 CGGTGGCTGGGAGGTAGAA 60.988 63.158 0.00 0.00 0.00 2.10
168 169 2.363795 CGGTGGCTGGGAGGTAGA 60.364 66.667 0.00 0.00 0.00 2.59
169 170 4.162690 GCGGTGGCTGGGAGGTAG 62.163 72.222 0.00 0.00 35.83 3.18
188 189 4.996434 AGCCACACGTGCTCTGCC 62.996 66.667 17.22 0.00 32.41 4.85
189 190 3.720193 CAGCCACACGTGCTCTGC 61.720 66.667 17.22 12.99 36.81 4.26
190 191 2.029518 TCAGCCACACGTGCTCTG 59.970 61.111 17.22 18.90 36.81 3.35
191 192 2.029666 GTCAGCCACACGTGCTCT 59.970 61.111 17.22 7.24 36.81 4.09
192 193 3.406361 CGTCAGCCACACGTGCTC 61.406 66.667 17.22 4.73 36.81 4.26
193 194 4.969196 CCGTCAGCCACACGTGCT 62.969 66.667 17.22 3.83 40.41 4.40
204 205 3.274586 CATGGATGCCGCCGTCAG 61.275 66.667 0.00 0.00 0.00 3.51
205 206 4.854924 CCATGGATGCCGCCGTCA 62.855 66.667 5.56 0.00 0.00 4.35
206 207 4.856801 ACCATGGATGCCGCCGTC 62.857 66.667 21.47 0.00 0.00 4.79
208 209 4.854924 TCACCATGGATGCCGCCG 62.855 66.667 21.47 0.00 0.00 6.46
209 210 2.203394 ATCACCATGGATGCCGCC 60.203 61.111 21.47 0.00 0.00 6.13
210 211 3.036577 CATCACCATGGATGCCGC 58.963 61.111 21.47 0.00 38.35 6.53
228 229 2.778299 TGCCAACTAAGGTGACATCAC 58.222 47.619 3.27 3.27 45.72 3.06
229 230 3.500448 TTGCCAACTAAGGTGACATCA 57.500 42.857 0.00 0.00 0.00 3.07
230 231 4.846779 TTTTGCCAACTAAGGTGACATC 57.153 40.909 0.00 0.00 0.00 3.06
231 232 5.772672 TGTATTTTGCCAACTAAGGTGACAT 59.227 36.000 0.00 0.00 0.00 3.06
232 233 5.133941 TGTATTTTGCCAACTAAGGTGACA 58.866 37.500 0.00 0.00 0.00 3.58
233 234 5.699097 TGTATTTTGCCAACTAAGGTGAC 57.301 39.130 0.00 0.00 0.00 3.67
234 235 5.830991 ACTTGTATTTTGCCAACTAAGGTGA 59.169 36.000 0.00 0.00 0.00 4.02
235 236 6.016276 AGACTTGTATTTTGCCAACTAAGGTG 60.016 38.462 0.00 0.00 0.00 4.00
236 237 6.068670 AGACTTGTATTTTGCCAACTAAGGT 58.931 36.000 0.00 0.00 0.00 3.50
237 238 6.575162 AGACTTGTATTTTGCCAACTAAGG 57.425 37.500 0.00 0.00 0.00 2.69
238 239 8.871686 AAAAGACTTGTATTTTGCCAACTAAG 57.128 30.769 5.47 0.00 0.00 2.18
240 241 9.738832 GTTAAAAGACTTGTATTTTGCCAACTA 57.261 29.630 14.06 0.00 31.41 2.24
241 242 8.474831 AGTTAAAAGACTTGTATTTTGCCAACT 58.525 29.630 14.06 12.53 31.41 3.16
242 243 8.642908 AGTTAAAAGACTTGTATTTTGCCAAC 57.357 30.769 14.06 10.97 31.41 3.77
243 244 9.738832 GTAGTTAAAAGACTTGTATTTTGCCAA 57.261 29.630 14.06 1.33 31.41 4.52
244 245 8.904834 TGTAGTTAAAAGACTTGTATTTTGCCA 58.095 29.630 14.06 3.72 31.41 4.92
245 246 9.908152 ATGTAGTTAAAAGACTTGTATTTTGCC 57.092 29.630 14.06 6.39 31.41 4.52
251 252 9.362539 CCGTGTATGTAGTTAAAAGACTTGTAT 57.637 33.333 0.00 0.00 0.00 2.29
252 253 8.575589 TCCGTGTATGTAGTTAAAAGACTTGTA 58.424 33.333 0.00 0.00 0.00 2.41
253 254 7.436118 TCCGTGTATGTAGTTAAAAGACTTGT 58.564 34.615 0.00 0.00 0.00 3.16
254 255 7.411588 GCTCCGTGTATGTAGTTAAAAGACTTG 60.412 40.741 0.00 0.00 0.00 3.16
255 256 6.589139 GCTCCGTGTATGTAGTTAAAAGACTT 59.411 38.462 0.00 0.00 0.00 3.01
256 257 6.098017 GCTCCGTGTATGTAGTTAAAAGACT 58.902 40.000 0.00 0.00 0.00 3.24
257 258 5.865552 TGCTCCGTGTATGTAGTTAAAAGAC 59.134 40.000 0.00 0.00 0.00 3.01
258 259 6.028146 TGCTCCGTGTATGTAGTTAAAAGA 57.972 37.500 0.00 0.00 0.00 2.52
259 260 6.715344 TTGCTCCGTGTATGTAGTTAAAAG 57.285 37.500 0.00 0.00 0.00 2.27
260 261 7.493743 TTTTGCTCCGTGTATGTAGTTAAAA 57.506 32.000 0.00 0.00 0.00 1.52
261 262 7.388224 TGATTTTGCTCCGTGTATGTAGTTAAA 59.612 33.333 0.00 0.00 0.00 1.52
262 263 6.874664 TGATTTTGCTCCGTGTATGTAGTTAA 59.125 34.615 0.00 0.00 0.00 2.01
263 264 6.399743 TGATTTTGCTCCGTGTATGTAGTTA 58.600 36.000 0.00 0.00 0.00 2.24
264 265 5.242434 TGATTTTGCTCCGTGTATGTAGTT 58.758 37.500 0.00 0.00 0.00 2.24
265 266 4.827692 TGATTTTGCTCCGTGTATGTAGT 58.172 39.130 0.00 0.00 0.00 2.73
266 267 5.794687 TTGATTTTGCTCCGTGTATGTAG 57.205 39.130 0.00 0.00 0.00 2.74
267 268 6.561737 TTTTGATTTTGCTCCGTGTATGTA 57.438 33.333 0.00 0.00 0.00 2.29
268 269 5.446143 TTTTGATTTTGCTCCGTGTATGT 57.554 34.783 0.00 0.00 0.00 2.29
269 270 7.754924 ACTTATTTTGATTTTGCTCCGTGTATG 59.245 33.333 0.00 0.00 0.00 2.39
270 271 7.754924 CACTTATTTTGATTTTGCTCCGTGTAT 59.245 33.333 0.00 0.00 0.00 2.29
271 272 7.041030 TCACTTATTTTGATTTTGCTCCGTGTA 60.041 33.333 0.00 0.00 0.00 2.90
272 273 5.920273 CACTTATTTTGATTTTGCTCCGTGT 59.080 36.000 0.00 0.00 0.00 4.49
273 274 6.148948 TCACTTATTTTGATTTTGCTCCGTG 58.851 36.000 0.00 0.00 0.00 4.94
274 275 6.325919 TCACTTATTTTGATTTTGCTCCGT 57.674 33.333 0.00 0.00 0.00 4.69
275 276 7.756722 AGATTCACTTATTTTGATTTTGCTCCG 59.243 33.333 0.00 0.00 0.00 4.63
276 277 8.992835 AGATTCACTTATTTTGATTTTGCTCC 57.007 30.769 0.00 0.00 0.00 4.70
320 321 9.958285 CGATGCAGACAACATATAAATGTATAC 57.042 33.333 0.00 0.00 45.79 1.47
321 322 9.921637 TCGATGCAGACAACATATAAATGTATA 57.078 29.630 0.00 0.00 45.79 1.47
322 323 8.831715 TCGATGCAGACAACATATAAATGTAT 57.168 30.769 0.00 0.00 45.79 2.29
323 324 8.655651 TTCGATGCAGACAACATATAAATGTA 57.344 30.769 0.00 0.00 45.79 2.29
325 326 9.110617 GATTTCGATGCAGACAACATATAAATG 57.889 33.333 0.00 0.00 39.17 2.32
326 327 9.060347 AGATTTCGATGCAGACAACATATAAAT 57.940 29.630 0.00 0.00 30.53 1.40
327 328 8.437360 AGATTTCGATGCAGACAACATATAAA 57.563 30.769 0.00 0.00 0.00 1.40
328 329 7.171508 GGAGATTTCGATGCAGACAACATATAA 59.828 37.037 0.00 0.00 0.00 0.98
329 330 6.646653 GGAGATTTCGATGCAGACAACATATA 59.353 38.462 0.00 0.00 0.00 0.86
330 331 5.468072 GGAGATTTCGATGCAGACAACATAT 59.532 40.000 0.00 0.00 0.00 1.78
331 332 4.811024 GGAGATTTCGATGCAGACAACATA 59.189 41.667 0.00 0.00 0.00 2.29
332 333 3.624861 GGAGATTTCGATGCAGACAACAT 59.375 43.478 0.00 0.00 0.00 2.71
333 334 3.002791 GGAGATTTCGATGCAGACAACA 58.997 45.455 0.00 0.00 0.00 3.33
334 335 3.002791 TGGAGATTTCGATGCAGACAAC 58.997 45.455 0.00 0.00 0.00 3.32
335 336 3.333029 TGGAGATTTCGATGCAGACAA 57.667 42.857 0.00 0.00 0.00 3.18
336 337 3.055891 TCTTGGAGATTTCGATGCAGACA 60.056 43.478 0.00 0.00 0.00 3.41
337 338 3.525537 TCTTGGAGATTTCGATGCAGAC 58.474 45.455 0.00 0.00 0.00 3.51
338 339 3.431346 CCTCTTGGAGATTTCGATGCAGA 60.431 47.826 0.00 0.00 34.57 4.26
339 340 2.871022 CCTCTTGGAGATTTCGATGCAG 59.129 50.000 0.00 0.00 34.57 4.41
340 341 2.501316 TCCTCTTGGAGATTTCGATGCA 59.499 45.455 0.00 0.00 37.46 3.96
341 342 2.869192 GTCCTCTTGGAGATTTCGATGC 59.131 50.000 0.00 0.00 44.16 3.91
342 343 4.399004 AGTCCTCTTGGAGATTTCGATG 57.601 45.455 0.00 0.00 44.16 3.84
343 344 6.739331 ATAAGTCCTCTTGGAGATTTCGAT 57.261 37.500 0.00 0.00 44.16 3.59
344 345 7.841282 ATATAAGTCCTCTTGGAGATTTCGA 57.159 36.000 0.00 0.00 44.16 3.71
345 346 8.894768 AAATATAAGTCCTCTTGGAGATTTCG 57.105 34.615 0.00 0.00 44.16 3.46
356 357 8.885346 CCCTCCATTTCTAAATATAAGTCCTCT 58.115 37.037 0.00 0.00 0.00 3.69
357 358 8.881262 TCCCTCCATTTCTAAATATAAGTCCTC 58.119 37.037 0.00 0.00 0.00 3.71
358 359 8.814448 TCCCTCCATTTCTAAATATAAGTCCT 57.186 34.615 0.00 0.00 0.00 3.85
359 360 8.661345 ACTCCCTCCATTTCTAAATATAAGTCC 58.339 37.037 0.00 0.00 0.00 3.85
360 361 9.495572 CACTCCCTCCATTTCTAAATATAAGTC 57.504 37.037 0.00 0.00 0.00 3.01
361 362 7.939588 GCACTCCCTCCATTTCTAAATATAAGT 59.060 37.037 0.00 0.00 0.00 2.24
362 363 7.939039 TGCACTCCCTCCATTTCTAAATATAAG 59.061 37.037 0.00 0.00 0.00 1.73
363 364 7.811282 TGCACTCCCTCCATTTCTAAATATAA 58.189 34.615 0.00 0.00 0.00 0.98
364 365 7.387265 TGCACTCCCTCCATTTCTAAATATA 57.613 36.000 0.00 0.00 0.00 0.86
365 366 6.266131 TGCACTCCCTCCATTTCTAAATAT 57.734 37.500 0.00 0.00 0.00 1.28
366 367 5.708736 TGCACTCCCTCCATTTCTAAATA 57.291 39.130 0.00 0.00 0.00 1.40
367 368 4.591321 TGCACTCCCTCCATTTCTAAAT 57.409 40.909 0.00 0.00 0.00 1.40
368 369 4.272489 CATGCACTCCCTCCATTTCTAAA 58.728 43.478 0.00 0.00 0.00 1.85
369 370 3.889815 CATGCACTCCCTCCATTTCTAA 58.110 45.455 0.00 0.00 0.00 2.10
370 371 2.421952 GCATGCACTCCCTCCATTTCTA 60.422 50.000 14.21 0.00 0.00 2.10
371 372 1.684248 GCATGCACTCCCTCCATTTCT 60.684 52.381 14.21 0.00 0.00 2.52
372 373 0.743097 GCATGCACTCCCTCCATTTC 59.257 55.000 14.21 0.00 0.00 2.17
373 374 0.333993 AGCATGCACTCCCTCCATTT 59.666 50.000 21.98 0.00 0.00 2.32
374 375 0.333993 AAGCATGCACTCCCTCCATT 59.666 50.000 21.98 0.00 0.00 3.16
375 376 0.106819 GAAGCATGCACTCCCTCCAT 60.107 55.000 21.98 0.00 0.00 3.41
376 377 1.300963 GAAGCATGCACTCCCTCCA 59.699 57.895 21.98 0.00 0.00 3.86
377 378 0.106819 ATGAAGCATGCACTCCCTCC 60.107 55.000 21.98 0.00 0.00 4.30
378 379 1.307097 GATGAAGCATGCACTCCCTC 58.693 55.000 21.98 11.15 0.00 4.30
379 380 0.622136 TGATGAAGCATGCACTCCCT 59.378 50.000 21.98 6.12 0.00 4.20
380 381 0.737219 GTGATGAAGCATGCACTCCC 59.263 55.000 21.98 10.61 0.00 4.30
381 382 1.747709 AGTGATGAAGCATGCACTCC 58.252 50.000 21.98 6.09 36.98 3.85
382 383 3.008330 AGAAGTGATGAAGCATGCACTC 58.992 45.455 21.98 16.11 40.43 3.51
383 384 3.008330 GAGAAGTGATGAAGCATGCACT 58.992 45.455 21.98 10.49 42.91 4.40
384 385 3.008330 AGAGAAGTGATGAAGCATGCAC 58.992 45.455 21.98 13.92 0.00 4.57
385 386 3.007635 CAGAGAAGTGATGAAGCATGCA 58.992 45.455 21.98 0.00 0.00 3.96
386 387 2.223294 GCAGAGAAGTGATGAAGCATGC 60.223 50.000 10.51 10.51 0.00 4.06
387 388 2.355132 GGCAGAGAAGTGATGAAGCATG 59.645 50.000 0.00 0.00 0.00 4.06
388 389 2.026542 TGGCAGAGAAGTGATGAAGCAT 60.027 45.455 0.00 0.00 0.00 3.79
389 390 1.348696 TGGCAGAGAAGTGATGAAGCA 59.651 47.619 0.00 0.00 0.00 3.91
390 391 1.736681 GTGGCAGAGAAGTGATGAAGC 59.263 52.381 0.00 0.00 0.00 3.86
391 392 3.260740 GAGTGGCAGAGAAGTGATGAAG 58.739 50.000 0.00 0.00 0.00 3.02
392 393 2.634453 TGAGTGGCAGAGAAGTGATGAA 59.366 45.455 0.00 0.00 0.00 2.57
393 394 2.250924 TGAGTGGCAGAGAAGTGATGA 58.749 47.619 0.00 0.00 0.00 2.92
394 395 2.756840 TGAGTGGCAGAGAAGTGATG 57.243 50.000 0.00 0.00 0.00 3.07
395 396 5.011533 GGTATATGAGTGGCAGAGAAGTGAT 59.988 44.000 0.00 0.00 0.00 3.06
396 397 4.342378 GGTATATGAGTGGCAGAGAAGTGA 59.658 45.833 0.00 0.00 0.00 3.41
397 398 4.626042 GGTATATGAGTGGCAGAGAAGTG 58.374 47.826 0.00 0.00 0.00 3.16
398 399 3.319405 CGGTATATGAGTGGCAGAGAAGT 59.681 47.826 0.00 0.00 0.00 3.01
399 400 3.570125 TCGGTATATGAGTGGCAGAGAAG 59.430 47.826 0.00 0.00 0.00 2.85
400 401 3.562182 TCGGTATATGAGTGGCAGAGAA 58.438 45.455 0.00 0.00 0.00 2.87
401 402 3.223674 TCGGTATATGAGTGGCAGAGA 57.776 47.619 0.00 0.00 0.00 3.10
402 403 3.119316 GGATCGGTATATGAGTGGCAGAG 60.119 52.174 0.00 0.00 0.00 3.35
403 404 2.826128 GGATCGGTATATGAGTGGCAGA 59.174 50.000 0.00 0.00 0.00 4.26
404 405 2.562738 TGGATCGGTATATGAGTGGCAG 59.437 50.000 0.00 0.00 0.00 4.85
405 406 2.604139 TGGATCGGTATATGAGTGGCA 58.396 47.619 0.00 0.00 0.00 4.92
406 407 3.678056 TTGGATCGGTATATGAGTGGC 57.322 47.619 0.00 0.00 0.00 5.01
407 408 7.445402 AGAAATTTTGGATCGGTATATGAGTGG 59.555 37.037 0.00 0.00 0.00 4.00
408 409 8.383318 AGAAATTTTGGATCGGTATATGAGTG 57.617 34.615 0.00 0.00 0.00 3.51
409 410 8.980481 AAGAAATTTTGGATCGGTATATGAGT 57.020 30.769 0.00 0.00 0.00 3.41
410 411 9.277783 AGAAGAAATTTTGGATCGGTATATGAG 57.722 33.333 0.00 0.00 0.00 2.90
411 412 9.273016 GAGAAGAAATTTTGGATCGGTATATGA 57.727 33.333 0.00 0.00 0.00 2.15
412 413 9.277783 AGAGAAGAAATTTTGGATCGGTATATG 57.722 33.333 0.00 0.00 0.00 1.78
413 414 9.853177 AAGAGAAGAAATTTTGGATCGGTATAT 57.147 29.630 0.00 0.00 0.00 0.86
415 416 9.110502 GTAAGAGAAGAAATTTTGGATCGGTAT 57.889 33.333 0.00 0.00 0.00 2.73
416 417 8.098286 TGTAAGAGAAGAAATTTTGGATCGGTA 58.902 33.333 0.00 0.00 0.00 4.02
417 418 6.940298 TGTAAGAGAAGAAATTTTGGATCGGT 59.060 34.615 0.00 0.00 0.00 4.69
418 419 7.377766 TGTAAGAGAAGAAATTTTGGATCGG 57.622 36.000 0.00 0.00 0.00 4.18
419 420 6.963805 GCTGTAAGAGAAGAAATTTTGGATCG 59.036 38.462 0.00 0.00 34.07 3.69
420 421 7.254137 GGCTGTAAGAGAAGAAATTTTGGATC 58.746 38.462 0.00 0.00 34.07 3.36
421 422 6.127897 CGGCTGTAAGAGAAGAAATTTTGGAT 60.128 38.462 0.00 0.00 34.07 3.41
422 423 5.181245 CGGCTGTAAGAGAAGAAATTTTGGA 59.819 40.000 0.00 0.00 34.07 3.53
423 424 5.181245 TCGGCTGTAAGAGAAGAAATTTTGG 59.819 40.000 0.00 0.00 34.07 3.28
424 425 6.241207 TCGGCTGTAAGAGAAGAAATTTTG 57.759 37.500 0.00 0.00 34.07 2.44
425 426 6.877611 TTCGGCTGTAAGAGAAGAAATTTT 57.122 33.333 0.00 0.00 34.07 1.82
426 427 6.565999 CGTTTCGGCTGTAAGAGAAGAAATTT 60.566 38.462 0.00 0.00 34.56 1.82
427 428 5.107065 CGTTTCGGCTGTAAGAGAAGAAATT 60.107 40.000 0.00 0.00 34.56 1.82
428 429 4.389077 CGTTTCGGCTGTAAGAGAAGAAAT 59.611 41.667 0.00 0.00 34.56 2.17
429 430 3.739300 CGTTTCGGCTGTAAGAGAAGAAA 59.261 43.478 0.00 0.00 34.56 2.52
430 431 3.005050 TCGTTTCGGCTGTAAGAGAAGAA 59.995 43.478 0.00 0.00 34.56 2.52
431 432 2.555325 TCGTTTCGGCTGTAAGAGAAGA 59.445 45.455 0.00 0.00 34.56 2.87
432 433 2.942710 TCGTTTCGGCTGTAAGAGAAG 58.057 47.619 0.00 0.00 34.56 2.85
433 434 3.587797 ATCGTTTCGGCTGTAAGAGAA 57.412 42.857 0.00 0.00 34.07 2.87
434 435 3.057104 TCAATCGTTTCGGCTGTAAGAGA 60.057 43.478 0.00 0.00 34.07 3.10
435 436 3.250744 TCAATCGTTTCGGCTGTAAGAG 58.749 45.455 0.00 0.00 34.07 2.85
436 437 3.057104 TCTCAATCGTTTCGGCTGTAAGA 60.057 43.478 0.00 0.00 34.07 2.10
437 438 3.250744 TCTCAATCGTTTCGGCTGTAAG 58.749 45.455 0.00 0.00 0.00 2.34
438 439 3.306917 TCTCAATCGTTTCGGCTGTAA 57.693 42.857 0.00 0.00 0.00 2.41
439 440 3.186909 CATCTCAATCGTTTCGGCTGTA 58.813 45.455 0.00 0.00 0.00 2.74
440 441 2.002586 CATCTCAATCGTTTCGGCTGT 58.997 47.619 0.00 0.00 0.00 4.40
441 442 2.002586 ACATCTCAATCGTTTCGGCTG 58.997 47.619 0.00 0.00 0.00 4.85
442 443 2.386661 ACATCTCAATCGTTTCGGCT 57.613 45.000 0.00 0.00 0.00 5.52
443 444 4.034048 ACAATACATCTCAATCGTTTCGGC 59.966 41.667 0.00 0.00 0.00 5.54
444 445 5.718649 ACAATACATCTCAATCGTTTCGG 57.281 39.130 0.00 0.00 0.00 4.30
445 446 6.761117 TCAACAATACATCTCAATCGTTTCG 58.239 36.000 0.00 0.00 0.00 3.46
448 449 8.830580 CCTATTCAACAATACATCTCAATCGTT 58.169 33.333 0.00 0.00 0.00 3.85
449 450 8.204160 TCCTATTCAACAATACATCTCAATCGT 58.796 33.333 0.00 0.00 0.00 3.73
450 451 8.593492 TCCTATTCAACAATACATCTCAATCG 57.407 34.615 0.00 0.00 0.00 3.34
453 454 9.739276 AGTTTCCTATTCAACAATACATCTCAA 57.261 29.630 0.00 0.00 0.00 3.02
454 455 9.739276 AAGTTTCCTATTCAACAATACATCTCA 57.261 29.630 0.00 0.00 0.00 3.27
456 457 9.739276 TGAAGTTTCCTATTCAACAATACATCT 57.261 29.630 0.00 0.00 32.66 2.90
459 460 9.959749 GTTTGAAGTTTCCTATTCAACAATACA 57.040 29.630 0.13 0.00 43.21 2.29
462 463 8.912988 TCAGTTTGAAGTTTCCTATTCAACAAT 58.087 29.630 0.13 0.00 43.21 2.71
463 464 8.188139 GTCAGTTTGAAGTTTCCTATTCAACAA 58.812 33.333 0.13 0.00 43.21 2.83
464 465 7.556275 AGTCAGTTTGAAGTTTCCTATTCAACA 59.444 33.333 0.13 0.00 43.21 3.33
465 466 7.931275 AGTCAGTTTGAAGTTTCCTATTCAAC 58.069 34.615 0.13 0.00 43.21 3.18
466 467 8.405531 CAAGTCAGTTTGAAGTTTCCTATTCAA 58.594 33.333 0.00 0.00 42.17 2.69
467 468 7.013274 CCAAGTCAGTTTGAAGTTTCCTATTCA 59.987 37.037 0.00 0.00 33.73 2.57
468 469 7.363431 CCAAGTCAGTTTGAAGTTTCCTATTC 58.637 38.462 0.00 0.00 0.00 1.75
469 470 6.239036 GCCAAGTCAGTTTGAAGTTTCCTATT 60.239 38.462 0.00 0.00 0.00 1.73
470 471 5.241728 GCCAAGTCAGTTTGAAGTTTCCTAT 59.758 40.000 0.00 0.00 0.00 2.57
471 472 4.578928 GCCAAGTCAGTTTGAAGTTTCCTA 59.421 41.667 0.00 0.00 0.00 2.94
563 573 9.466497 AGAAGCACCTATTTTCTTGATGATTAA 57.534 29.630 0.00 0.00 0.00 1.40
571 581 3.181506 GCGGAGAAGCACCTATTTTCTTG 60.182 47.826 0.00 0.00 37.05 3.02
591 601 3.182173 CAGCACACCTTAAACAAAATGCG 59.818 43.478 0.00 0.00 36.93 4.73
624 636 1.871822 CGAAAACCCAGCGGCAAAAAT 60.872 47.619 1.45 0.00 0.00 1.82
633 645 1.539827 AGTTATGCACGAAAACCCAGC 59.460 47.619 0.00 0.00 0.00 4.85
705 719 5.299949 CCATTTTCTCCCCTTTTCACTTTG 58.700 41.667 0.00 0.00 0.00 2.77
755 786 8.261349 ACCCCAACATATGCAAATATATTGTT 57.739 30.769 1.58 0.00 0.00 2.83
764 808 3.380471 AGCTACCCCAACATATGCAAA 57.620 42.857 1.58 0.00 0.00 3.68
799 850 4.393680 TCGGTGTTCATTATACAAAGGTGC 59.606 41.667 0.00 0.00 0.00 5.01
807 858 9.400638 TGAATTTTGTTTCGGTGTTCATTATAC 57.599 29.630 0.00 0.00 0.00 1.47
849 1129 8.540388 TGTTAAGGAGAAGCTTATAATGTCTGT 58.460 33.333 0.00 0.00 0.00 3.41
891 1174 3.099438 CAGATGCCTTCTGCTGCG 58.901 61.111 1.27 0.00 45.16 5.18
906 1190 0.740164 ACAAGCGCTGCTGATCTCAG 60.740 55.000 12.58 2.75 46.40 3.35
922 1206 3.417101 ACCAAAGGCAACGATGATACAA 58.583 40.909 0.00 0.00 46.39 2.41
942 1226 1.079750 GTCGACTCCTCTGGGCAAC 60.080 63.158 8.70 0.00 0.00 4.17
957 1241 1.231221 TCGAATTGTTTGGGTGGTCG 58.769 50.000 0.00 0.00 0.00 4.79
971 1279 4.187694 GGAGAGATGCTTCTTGTTCGAAT 58.812 43.478 0.00 0.00 30.30 3.34
974 1289 2.670414 GTGGAGAGATGCTTCTTGTTCG 59.330 50.000 3.29 0.00 30.30 3.95
1049 1364 4.142790 CAATCATCTTGAATGGGGAGAGG 58.857 47.826 0.00 0.00 0.00 3.69
1291 1615 3.448301 CCCTTTATCATGTGGTTGTGCAT 59.552 43.478 0.00 0.00 0.00 3.96
1312 1636 1.678101 CCTCCAGCCGATCAAATTTCC 59.322 52.381 0.00 0.00 0.00 3.13
1388 1712 3.797256 CCTTATGGCTTAGAAACTCGACG 59.203 47.826 0.00 0.00 0.00 5.12
1765 2108 2.434428 TCAGTCCACGAACTCCTAGTC 58.566 52.381 0.00 0.00 0.00 2.59
1821 2167 5.726980 ACAATGGATAACACATGCAACTT 57.273 34.783 0.00 0.00 0.00 2.66
1896 2242 4.260334 GCCAAAGTGTTTCTTCACATTTGC 60.260 41.667 0.00 0.00 40.37 3.68
1991 2344 2.686119 TCAGATGATGCATCTCCTCCA 58.314 47.619 26.32 7.11 46.83 3.86
2191 2554 2.612972 CCAACTAGCTCACCAACATCGT 60.613 50.000 0.00 0.00 0.00 3.73
2195 2558 0.250727 GGCCAACTAGCTCACCAACA 60.251 55.000 0.00 0.00 0.00 3.33
2317 2687 1.933181 CAATGCGCTTCAACTCCGATA 59.067 47.619 9.73 0.00 0.00 2.92
2320 2690 1.135315 CCAATGCGCTTCAACTCCG 59.865 57.895 9.73 0.00 0.00 4.63
2325 2695 1.266718 GTCTTCACCAATGCGCTTCAA 59.733 47.619 9.73 0.00 0.00 2.69
2326 2696 0.874390 GTCTTCACCAATGCGCTTCA 59.126 50.000 9.73 0.00 0.00 3.02
2327 2697 0.874390 TGTCTTCACCAATGCGCTTC 59.126 50.000 9.73 0.00 0.00 3.86
2328 2698 1.538047 ATGTCTTCACCAATGCGCTT 58.462 45.000 9.73 0.00 0.00 4.68
2329 2699 1.538047 AATGTCTTCACCAATGCGCT 58.462 45.000 9.73 0.00 0.00 5.92
2330 2700 3.698029 ATAATGTCTTCACCAATGCGC 57.302 42.857 0.00 0.00 0.00 6.09
2881 3294 1.743772 CGCATACCAGGGACCTCAAAG 60.744 57.143 0.00 0.00 0.00 2.77
3116 3597 8.747538 TCACACAACTGCTAGAGTCTATATTA 57.252 34.615 0.00 0.00 31.73 0.98
3178 3659 7.922382 ACCCTTTGAATTGATCTTCTCTAAGA 58.078 34.615 11.32 0.00 45.63 2.10
3286 3776 4.519540 AACATTTCCATCTGGTTTTCCG 57.480 40.909 0.00 0.00 44.36 4.30
3340 3830 3.650942 ACAAGATTCACCTGGGTAGTCAA 59.349 43.478 0.00 0.00 0.00 3.18
3349 3839 3.866651 CAGGTAGGACAAGATTCACCTG 58.133 50.000 4.33 4.33 44.98 4.00
3423 4425 9.678260 AAAGAATAGTATGCTCTTCAAGTTGAT 57.322 29.630 6.36 0.00 32.29 2.57
3442 5877 8.470805 GTGACTCATCTAACTGGAGAAAGAATA 58.529 37.037 0.00 0.00 33.00 1.75
3463 5898 3.002791 CGTGATGTATTGCCAAGTGACT 58.997 45.455 0.00 0.00 0.00 3.41
3534 5972 1.135575 CGAGCCTTGCCAACTGATTTC 60.136 52.381 0.00 0.00 0.00 2.17
3586 6024 0.261991 ATAGCCCGGTCTCTCAAGGA 59.738 55.000 0.00 0.00 0.00 3.36
3663 6101 3.427528 GTCAACGAGTCGCAGTGATAAAA 59.572 43.478 13.59 0.00 0.00 1.52
3665 6103 2.030628 TGTCAACGAGTCGCAGTGATAA 60.031 45.455 13.59 4.42 0.00 1.75
3666 6104 1.538075 TGTCAACGAGTCGCAGTGATA 59.462 47.619 13.59 9.40 0.00 2.15
3695 6133 6.114187 AGATTGTTTCTCCACACATGTAGA 57.886 37.500 0.00 0.00 0.00 2.59
3712 6150 1.849039 CCTCCAGGGATGGAAGATTGT 59.151 52.381 0.00 0.00 37.55 2.71
3928 6380 4.627467 GCGACATCAACTCTTCACAATAGT 59.373 41.667 0.00 0.00 0.00 2.12
4022 6486 6.124316 AGAGAGCATGGTAATATCATTGCT 57.876 37.500 0.00 9.19 34.35 3.91
4039 6503 3.775661 AGTCGAGCTTCTTAAGAGAGC 57.224 47.619 21.95 21.95 32.44 4.09
4208 6815 1.759445 AGCTCGTGGCACTCATCTATT 59.241 47.619 16.72 0.00 44.79 1.73
4273 6884 5.163804 TGTGCATACAGTAGTTAAATTGCCG 60.164 40.000 0.00 0.00 31.91 5.69
4352 6968 7.646548 AGGTCTATTTTATTTTTCAGGAGCC 57.353 36.000 0.00 0.00 0.00 4.70
4382 6998 9.143631 CAAATGAAAAGGGTTAATGAGCTTAAG 57.856 33.333 0.00 0.00 29.97 1.85
4385 7001 7.066307 ACAAATGAAAAGGGTTAATGAGCTT 57.934 32.000 0.00 0.00 0.00 3.74
4417 7033 8.918202 TGTTTTAATCATCAGAAGTACCAACT 57.082 30.769 0.00 0.00 37.65 3.16
4500 7116 8.198109 TCTTCTGAAGAAAACGAGATTATAGGG 58.802 37.037 17.32 0.00 33.83 3.53
4520 7136 1.931841 CTGCACGACATCCATCTTCTG 59.068 52.381 0.00 0.00 0.00 3.02
4544 7175 4.079850 CCTCGCACTCCTGCAGCT 62.080 66.667 8.66 0.00 44.50 4.24
4549 7185 1.593196 TTGTTTTCCTCGCACTCCTG 58.407 50.000 0.00 0.00 0.00 3.86
4574 7210 4.408921 TGATACATGTTACTAGCAAGCCCT 59.591 41.667 2.30 0.00 0.00 5.19
4588 7242 4.036027 GCTGCTGCAATAGTTGATACATGT 59.964 41.667 11.11 2.69 39.41 3.21
4603 7259 2.713927 TACTCAACTGCGCTGCTGCA 62.714 55.000 14.80 15.89 43.95 4.41
4658 7352 7.503902 AGGAACAGGAAATATAATTTCTCCAGC 59.496 37.037 15.27 1.60 0.00 4.85
4958 7760 9.815936 AACTAATATAAGTGTGTTTGTAAACGC 57.184 29.630 12.71 12.71 46.63 4.84
4964 7766 9.709495 TCCGTAAACTAATATAAGTGTGTTTGT 57.291 29.630 0.00 0.00 0.00 2.83
4966 7768 9.374838 CCTCCGTAAACTAATATAAGTGTGTTT 57.625 33.333 0.00 0.00 0.00 2.83
4969 7771 9.245962 CTTCCTCCGTAAACTAATATAAGTGTG 57.754 37.037 0.00 0.00 0.00 3.82
5026 8121 4.413760 ACTAGTGCAACCTGGTAGTTCTA 58.586 43.478 0.00 1.09 37.80 2.10
5032 8127 2.231964 CGGTAACTAGTGCAACCTGGTA 59.768 50.000 16.23 0.00 37.80 3.25
5065 8160 2.257894 CCTCTCATAATCGCGATCAGC 58.742 52.381 23.92 0.00 43.95 4.26
5332 8449 5.499139 TTTACAAGCAGAAGGTTTGTCTG 57.501 39.130 0.00 0.00 46.39 3.51
5338 8455 6.177610 TCGGATATTTTACAAGCAGAAGGTT 58.822 36.000 0.00 0.00 35.46 3.50
5395 9994 3.126000 GCCTCAGTTTTCGATCTCCTTTG 59.874 47.826 0.00 0.00 0.00 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.