Multiple sequence alignment - TraesCS1B01G033700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G033700 chr1B 100.000 3449 0 0 1 3449 16429302 16425854 0.000000e+00 6370.0
1 TraesCS1B01G033700 chr1B 91.045 804 58 6 2649 3447 39819869 39819075 0.000000e+00 1074.0
2 TraesCS1B01G033700 chr1B 90.807 805 60 6 2649 3449 39829628 39828834 0.000000e+00 1064.0
3 TraesCS1B01G033700 chr1B 90.683 805 57 5 2649 3449 39826348 39825558 0.000000e+00 1055.0
4 TraesCS1B01G033700 chr1B 90.944 773 45 6 1844 2605 39846896 39846138 0.000000e+00 1016.0
5 TraesCS1B01G033700 chr1B 88.235 170 12 3 553 715 28563562 28563394 2.720000e-46 196.0
6 TraesCS1B01G033700 chr1B 86.857 175 18 2 555 724 427714069 427714243 1.260000e-44 191.0
7 TraesCS1B01G033700 chr1B 100.000 29 0 0 2912 2940 155736385 155736413 2.000000e-03 54.7
8 TraesCS1B01G033700 chr1A 90.827 1984 132 21 711 2670 22755206 22757163 0.000000e+00 2610.0
9 TraesCS1B01G033700 chr1A 94.118 102 6 0 336 437 22754270 22754169 4.610000e-34 156.0
10 TraesCS1B01G033700 chr1A 94.318 88 5 0 469 556 22755120 22755207 6.000000e-28 135.0
11 TraesCS1B01G033700 chr1A 94.444 36 1 1 2906 2940 265044916 265044951 2.000000e-03 54.7
12 TraesCS1B01G033700 chr1D 90.462 1992 130 24 711 2670 10936776 10934813 0.000000e+00 2571.0
13 TraesCS1B01G033700 chr1D 88.166 169 15 2 550 713 216018063 216017895 2.720000e-46 196.0
14 TraesCS1B01G033700 chr1D 92.593 108 8 0 330 437 10937711 10937818 4.610000e-34 156.0
15 TraesCS1B01G033700 chr1D 93.258 89 4 2 469 556 10936862 10936775 2.790000e-26 130.0
16 TraesCS1B01G033700 chr7A 78.022 1456 261 45 1007 2435 593376383 593377806 0.000000e+00 861.0
17 TraesCS1B01G033700 chr7A 77.970 1448 261 34 1016 2435 593016003 593014586 0.000000e+00 854.0
18 TraesCS1B01G033700 chr7A 92.179 179 12 1 1 179 397766654 397766478 5.710000e-63 252.0
19 TraesCS1B01G033700 chr7A 91.111 180 15 1 1 180 297034016 297033838 3.440000e-60 243.0
20 TraesCS1B01G033700 chr7B 77.717 1454 269 41 1007 2435 551539063 551540486 0.000000e+00 839.0
21 TraesCS1B01G033700 chr7B 89.091 165 12 5 555 713 666541542 666541378 2.100000e-47 200.0
22 TraesCS1B01G033700 chr7D 81.878 905 142 17 1542 2435 518574267 518575160 0.000000e+00 743.0
23 TraesCS1B01G033700 chr7D 80.859 559 90 14 1884 2435 518558406 518558954 1.140000e-114 424.0
24 TraesCS1B01G033700 chr7D 91.713 181 13 2 1 180 608864669 608864490 2.060000e-62 250.0
25 TraesCS1B01G033700 chr7D 79.370 349 60 9 1042 1384 518573774 518574116 5.750000e-58 235.0
26 TraesCS1B01G033700 chr7D 83.010 206 33 2 2231 2435 518266899 518267103 5.880000e-43 185.0
27 TraesCS1B01G033700 chr7D 94.286 35 1 1 2910 2944 575922618 575922651 6.000000e-03 52.8
28 TraesCS1B01G033700 chr2D 93.064 173 12 0 1 173 337373263 337373091 1.590000e-63 254.0
29 TraesCS1B01G033700 chr2D 75.870 460 85 13 2903 3343 27146369 27146821 9.700000e-51 211.0
30 TraesCS1B01G033700 chr2D 86.932 176 16 2 548 716 446317636 446317811 1.260000e-44 191.0
31 TraesCS1B01G033700 chr2D 85.870 184 17 4 552 728 309971416 309971597 1.630000e-43 187.0
32 TraesCS1B01G033700 chr2D 74.725 455 86 16 2911 3343 87364625 87364178 3.540000e-40 176.0
33 TraesCS1B01G033700 chr5A 92.486 173 13 0 1 173 454709256 454709428 7.390000e-62 248.0
34 TraesCS1B01G033700 chr3A 91.525 177 13 1 1 177 732740830 732740656 3.440000e-60 243.0
35 TraesCS1B01G033700 chr3A 87.500 80 9 1 473 552 40810281 40810359 1.320000e-14 91.6
36 TraesCS1B01G033700 chr3A 94.872 39 0 2 2912 2948 164566112 164566074 3.720000e-05 60.2
37 TraesCS1B01G033700 chr6B 91.061 179 13 3 1 177 279332809 279332632 4.450000e-59 239.0
38 TraesCS1B01G033700 chr6B 94.118 51 2 1 2674 2723 292634226 292634176 3.690000e-10 76.8
39 TraesCS1B01G033700 chr3B 90.556 180 17 0 1 180 790237709 790237530 4.450000e-59 239.0
40 TraesCS1B01G033700 chr3B 80.198 202 33 7 3186 3382 28628140 28627941 9.980000e-31 145.0
41 TraesCS1B01G033700 chr3B 77.778 207 38 5 3187 3387 620844211 620844415 1.680000e-23 121.0
42 TraesCS1B01G033700 chr3B 79.167 120 14 6 714 822 410616120 410616239 4.770000e-09 73.1
43 TraesCS1B01G033700 chr2A 90.395 177 17 0 1 177 429933269 429933445 2.070000e-57 233.0
44 TraesCS1B01G033700 chr2A 74.526 369 72 10 3029 3381 28557284 28557646 1.290000e-29 141.0
45 TraesCS1B01G033700 chr2A 82.432 74 10 3 3315 3387 634090197 634090126 1.030000e-05 62.1
46 TraesCS1B01G033700 chr2A 89.130 46 3 2 2899 2944 430045167 430045210 4.810000e-04 56.5
47 TraesCS1B01G033700 chr2A 96.875 32 0 1 2913 2944 134280487 134280457 6.000000e-03 52.8
48 TraesCS1B01G033700 chr6A 75.301 498 93 17 2913 3387 560249380 560248890 9.700000e-51 211.0
49 TraesCS1B01G033700 chr6A 96.875 32 0 1 2910 2940 12507009 12506978 6.000000e-03 52.8
50 TraesCS1B01G033700 chr5B 88.000 175 14 4 547 714 577516222 577516048 2.100000e-47 200.0
51 TraesCS1B01G033700 chr5B 89.091 165 13 2 555 715 711279672 711279835 2.100000e-47 200.0
52 TraesCS1B01G033700 chr5B 90.000 70 6 1 471 540 143502144 143502212 4.740000e-14 89.8
53 TraesCS1B01G033700 chr2B 74.560 511 97 18 2903 3389 51204169 51204670 3.510000e-45 193.0
54 TraesCS1B01G033700 chr2B 72.987 559 99 34 2912 3442 392539602 392539068 7.710000e-32 148.0
55 TraesCS1B01G033700 chr2B 96.970 33 0 1 2912 2944 782679277 782679308 2.000000e-03 54.7
56 TraesCS1B01G033700 chr3D 86.932 176 16 2 547 715 477888210 477888385 1.260000e-44 191.0
57 TraesCS1B01G033700 chrUn 92.000 100 6 2 339 437 27691737 27691639 4.640000e-29 139.0
58 TraesCS1B01G033700 chrUn 91.765 85 6 1 472 556 27692500 27692583 2.170000e-22 117.0
59 TraesCS1B01G033700 chr4D 94.595 37 0 2 2908 2944 146024819 146024785 4.810000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G033700 chr1B 16425854 16429302 3448 True 6370.0 6370 100.0000 1 3449 1 chr1B.!!$R1 3448
1 TraesCS1B01G033700 chr1B 39819075 39819869 794 True 1074.0 1074 91.0450 2649 3447 1 chr1B.!!$R3 798
2 TraesCS1B01G033700 chr1B 39825558 39829628 4070 True 1059.5 1064 90.7450 2649 3449 2 chr1B.!!$R5 800
3 TraesCS1B01G033700 chr1B 39846138 39846896 758 True 1016.0 1016 90.9440 1844 2605 1 chr1B.!!$R4 761
4 TraesCS1B01G033700 chr1A 22755120 22757163 2043 False 1372.5 2610 92.5725 469 2670 2 chr1A.!!$F2 2201
5 TraesCS1B01G033700 chr1D 10934813 10936862 2049 True 1350.5 2571 91.8600 469 2670 2 chr1D.!!$R2 2201
6 TraesCS1B01G033700 chr7A 593376383 593377806 1423 False 861.0 861 78.0220 1007 2435 1 chr7A.!!$F1 1428
7 TraesCS1B01G033700 chr7A 593014586 593016003 1417 True 854.0 854 77.9700 1016 2435 1 chr7A.!!$R3 1419
8 TraesCS1B01G033700 chr7B 551539063 551540486 1423 False 839.0 839 77.7170 1007 2435 1 chr7B.!!$F1 1428
9 TraesCS1B01G033700 chr7D 518573774 518575160 1386 False 489.0 743 80.6240 1042 2435 2 chr7D.!!$F4 1393
10 TraesCS1B01G033700 chr7D 518558406 518558954 548 False 424.0 424 80.8590 1884 2435 1 chr7D.!!$F2 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 556 0.102481 CAACGTGCGGGCTATCTACT 59.898 55.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2526 2588 0.036875 AGGGAACACTTGTAGCAGGC 59.963 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.755409 AGAGGGTGTGTTGTAACATATCA 57.245 39.130 7.00 0.00 41.59 2.15
25 26 6.313519 AGAGGGTGTGTTGTAACATATCAT 57.686 37.500 7.00 0.02 41.59 2.45
26 27 6.115446 AGAGGGTGTGTTGTAACATATCATG 58.885 40.000 7.00 0.00 41.59 3.07
27 28 6.061022 AGGGTGTGTTGTAACATATCATGA 57.939 37.500 0.00 0.00 41.59 3.07
28 29 6.662755 AGGGTGTGTTGTAACATATCATGAT 58.337 36.000 13.81 13.81 41.59 2.45
29 30 7.801104 AGGGTGTGTTGTAACATATCATGATA 58.199 34.615 17.56 17.56 41.59 2.15
30 31 7.715249 AGGGTGTGTTGTAACATATCATGATAC 59.285 37.037 17.60 8.00 41.59 2.24
31 32 7.041372 GGGTGTGTTGTAACATATCATGATACC 60.041 40.741 17.60 11.48 41.59 2.73
32 33 7.307160 GGTGTGTTGTAACATATCATGATACCG 60.307 40.741 17.60 13.75 41.59 4.02
33 34 7.223971 GTGTGTTGTAACATATCATGATACCGT 59.776 37.037 17.60 14.36 41.59 4.83
34 35 8.414778 TGTGTTGTAACATATCATGATACCGTA 58.585 33.333 17.60 7.18 41.59 4.02
35 36 9.419297 GTGTTGTAACATATCATGATACCGTAT 57.581 33.333 17.60 10.66 41.59 3.06
36 37 9.634163 TGTTGTAACATATCATGATACCGTATC 57.366 33.333 17.60 11.09 37.63 2.24
67 68 5.666969 TGTTGTACTACTTTGTGTCATGC 57.333 39.130 8.88 0.00 0.00 4.06
68 69 5.119694 TGTTGTACTACTTTGTGTCATGCA 58.880 37.500 8.88 0.00 0.00 3.96
69 70 5.762711 TGTTGTACTACTTTGTGTCATGCAT 59.237 36.000 8.88 0.00 0.00 3.96
70 71 5.861222 TGTACTACTTTGTGTCATGCATG 57.139 39.130 21.07 21.07 0.00 4.06
71 72 4.694982 TGTACTACTTTGTGTCATGCATGG 59.305 41.667 25.97 10.76 0.00 3.66
72 73 3.754965 ACTACTTTGTGTCATGCATGGT 58.245 40.909 25.97 15.83 0.00 3.55
73 74 4.905429 ACTACTTTGTGTCATGCATGGTA 58.095 39.130 25.97 16.09 0.00 3.25
74 75 5.312895 ACTACTTTGTGTCATGCATGGTAA 58.687 37.500 25.97 13.00 0.00 2.85
75 76 5.945784 ACTACTTTGTGTCATGCATGGTAAT 59.054 36.000 25.97 6.05 0.00 1.89
76 77 5.726980 ACTTTGTGTCATGCATGGTAATT 57.273 34.783 25.97 5.73 0.00 1.40
77 78 6.832520 ACTTTGTGTCATGCATGGTAATTA 57.167 33.333 25.97 2.92 0.00 1.40
78 79 7.225784 ACTTTGTGTCATGCATGGTAATTAA 57.774 32.000 25.97 12.39 0.00 1.40
79 80 7.839907 ACTTTGTGTCATGCATGGTAATTAAT 58.160 30.769 25.97 4.83 0.00 1.40
80 81 8.965819 ACTTTGTGTCATGCATGGTAATTAATA 58.034 29.630 25.97 0.55 0.00 0.98
81 82 9.800433 CTTTGTGTCATGCATGGTAATTAATAA 57.200 29.630 25.97 8.54 0.00 1.40
82 83 9.800433 TTTGTGTCATGCATGGTAATTAATAAG 57.200 29.630 25.97 0.00 0.00 1.73
83 84 7.939782 TGTGTCATGCATGGTAATTAATAAGG 58.060 34.615 25.97 0.00 0.00 2.69
84 85 6.863126 GTGTCATGCATGGTAATTAATAAGGC 59.137 38.462 25.97 0.00 0.00 4.35
85 86 6.548993 TGTCATGCATGGTAATTAATAAGGCA 59.451 34.615 25.97 0.75 0.00 4.75
86 87 7.069208 TGTCATGCATGGTAATTAATAAGGCAA 59.931 33.333 25.97 0.00 32.00 4.52
87 88 7.382218 GTCATGCATGGTAATTAATAAGGCAAC 59.618 37.037 25.97 7.11 32.00 4.17
88 89 6.155475 TGCATGGTAATTAATAAGGCAACC 57.845 37.500 0.00 0.00 37.17 3.77
89 90 5.896678 TGCATGGTAATTAATAAGGCAACCT 59.103 36.000 0.00 0.00 33.87 3.50
90 91 7.063593 TGCATGGTAATTAATAAGGCAACCTA 58.936 34.615 0.00 0.00 31.13 3.08
91 92 7.561722 TGCATGGTAATTAATAAGGCAACCTAA 59.438 33.333 0.00 0.00 31.13 2.69
92 93 8.082242 GCATGGTAATTAATAAGGCAACCTAAG 58.918 37.037 0.00 0.00 31.13 2.18
93 94 9.349713 CATGGTAATTAATAAGGCAACCTAAGA 57.650 33.333 0.00 0.00 31.13 2.10
106 107 8.548880 AGGCAACCTAAGATAGTAACTTATGA 57.451 34.615 8.72 0.00 28.47 2.15
107 108 9.160412 AGGCAACCTAAGATAGTAACTTATGAT 57.840 33.333 8.72 0.00 28.47 2.45
121 122 9.856488 AGTAACTTATGATACTATGCATTACGG 57.144 33.333 3.54 0.00 31.33 4.02
122 123 9.850628 GTAACTTATGATACTATGCATTACGGA 57.149 33.333 3.54 0.00 0.00 4.69
123 124 8.988064 AACTTATGATACTATGCATTACGGAG 57.012 34.615 3.54 0.00 0.00 4.63
124 125 7.548097 ACTTATGATACTATGCATTACGGAGG 58.452 38.462 3.54 0.00 0.00 4.30
125 126 7.178628 ACTTATGATACTATGCATTACGGAGGT 59.821 37.037 3.54 0.00 0.00 3.85
126 127 8.584063 TTATGATACTATGCATTACGGAGGTA 57.416 34.615 3.54 0.00 0.00 3.08
127 128 6.510879 TGATACTATGCATTACGGAGGTAG 57.489 41.667 3.54 0.00 0.00 3.18
128 129 6.008331 TGATACTATGCATTACGGAGGTAGT 58.992 40.000 3.54 0.88 0.00 2.73
129 130 7.170277 TGATACTATGCATTACGGAGGTAGTA 58.830 38.462 3.54 3.44 0.00 1.82
130 131 7.832685 TGATACTATGCATTACGGAGGTAGTAT 59.167 37.037 3.54 8.56 36.89 2.12
131 132 6.512342 ACTATGCATTACGGAGGTAGTATC 57.488 41.667 3.54 0.00 0.00 2.24
132 133 6.008331 ACTATGCATTACGGAGGTAGTATCA 58.992 40.000 3.54 0.00 0.00 2.15
133 134 6.663953 ACTATGCATTACGGAGGTAGTATCAT 59.336 38.462 3.54 0.00 0.00 2.45
134 135 7.832685 ACTATGCATTACGGAGGTAGTATCATA 59.167 37.037 3.54 0.00 0.00 2.15
135 136 7.661536 ATGCATTACGGAGGTAGTATCATAT 57.338 36.000 0.00 0.00 0.00 1.78
136 137 6.863275 TGCATTACGGAGGTAGTATCATATG 58.137 40.000 0.00 0.00 0.00 1.78
137 138 5.749109 GCATTACGGAGGTAGTATCATATGC 59.251 44.000 0.00 0.00 31.68 3.14
138 139 6.627287 GCATTACGGAGGTAGTATCATATGCA 60.627 42.308 0.00 0.00 35.92 3.96
139 140 7.492524 CATTACGGAGGTAGTATCATATGCAT 58.507 38.462 3.79 3.79 0.00 3.96
140 141 5.330455 ACGGAGGTAGTATCATATGCATG 57.670 43.478 10.16 0.00 0.00 4.06
141 142 5.016831 ACGGAGGTAGTATCATATGCATGA 58.983 41.667 10.16 0.00 45.15 3.07
172 173 8.694171 ATATATGATACTCCCCATTACAACCA 57.306 34.615 0.00 0.00 0.00 3.67
173 174 4.771114 TGATACTCCCCATTACAACCAG 57.229 45.455 0.00 0.00 0.00 4.00
174 175 3.118038 TGATACTCCCCATTACAACCAGC 60.118 47.826 0.00 0.00 0.00 4.85
175 176 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.00 0.00 4.85
176 177 0.625849 CTCCCCATTACAACCAGCCT 59.374 55.000 0.00 0.00 0.00 4.58
177 178 1.005924 CTCCCCATTACAACCAGCCTT 59.994 52.381 0.00 0.00 0.00 4.35
178 179 2.241176 CTCCCCATTACAACCAGCCTTA 59.759 50.000 0.00 0.00 0.00 2.69
179 180 2.241176 TCCCCATTACAACCAGCCTTAG 59.759 50.000 0.00 0.00 0.00 2.18
180 181 2.025321 CCCCATTACAACCAGCCTTAGT 60.025 50.000 0.00 0.00 0.00 2.24
181 182 3.279434 CCCATTACAACCAGCCTTAGTC 58.721 50.000 0.00 0.00 0.00 2.59
182 183 3.054361 CCCATTACAACCAGCCTTAGTCT 60.054 47.826 0.00 0.00 0.00 3.24
183 184 4.192317 CCATTACAACCAGCCTTAGTCTC 58.808 47.826 0.00 0.00 0.00 3.36
184 185 3.587797 TTACAACCAGCCTTAGTCTCG 57.412 47.619 0.00 0.00 0.00 4.04
185 186 1.339097 ACAACCAGCCTTAGTCTCGT 58.661 50.000 0.00 0.00 0.00 4.18
186 187 2.522185 ACAACCAGCCTTAGTCTCGTA 58.478 47.619 0.00 0.00 0.00 3.43
187 188 3.097614 ACAACCAGCCTTAGTCTCGTAT 58.902 45.455 0.00 0.00 0.00 3.06
188 189 3.119101 ACAACCAGCCTTAGTCTCGTATG 60.119 47.826 0.00 0.00 0.00 2.39
189 190 2.736347 ACCAGCCTTAGTCTCGTATGT 58.264 47.619 0.00 0.00 0.00 2.29
190 191 3.097614 ACCAGCCTTAGTCTCGTATGTT 58.902 45.455 0.00 0.00 0.00 2.71
191 192 3.130693 ACCAGCCTTAGTCTCGTATGTTC 59.869 47.826 0.00 0.00 0.00 3.18
192 193 3.491104 CCAGCCTTAGTCTCGTATGTTCC 60.491 52.174 0.00 0.00 0.00 3.62
193 194 3.130516 CAGCCTTAGTCTCGTATGTTCCA 59.869 47.826 0.00 0.00 0.00 3.53
194 195 3.381908 AGCCTTAGTCTCGTATGTTCCAG 59.618 47.826 0.00 0.00 0.00 3.86
195 196 3.380637 GCCTTAGTCTCGTATGTTCCAGA 59.619 47.826 0.00 0.00 0.00 3.86
196 197 4.734108 GCCTTAGTCTCGTATGTTCCAGAC 60.734 50.000 0.00 0.00 36.32 3.51
197 198 4.398358 CCTTAGTCTCGTATGTTCCAGACA 59.602 45.833 4.79 0.00 43.71 3.41
198 199 5.105877 CCTTAGTCTCGTATGTTCCAGACAA 60.106 44.000 4.79 0.00 42.62 3.18
199 200 4.442375 AGTCTCGTATGTTCCAGACAAG 57.558 45.455 4.79 0.00 42.62 3.16
200 201 3.193691 AGTCTCGTATGTTCCAGACAAGG 59.806 47.826 4.79 0.00 42.62 3.61
201 202 2.094182 TCTCGTATGTTCCAGACAAGGC 60.094 50.000 0.00 0.00 42.62 4.35
202 203 1.621317 TCGTATGTTCCAGACAAGGCA 59.379 47.619 0.00 0.00 42.62 4.75
203 204 2.037902 TCGTATGTTCCAGACAAGGCAA 59.962 45.455 0.00 0.00 42.62 4.52
204 205 2.811431 CGTATGTTCCAGACAAGGCAAA 59.189 45.455 0.00 0.00 42.62 3.68
205 206 3.364964 CGTATGTTCCAGACAAGGCAAAC 60.365 47.826 0.00 0.00 42.62 2.93
206 207 2.136298 TGTTCCAGACAAGGCAAACA 57.864 45.000 0.00 0.00 34.69 2.83
207 208 2.665165 TGTTCCAGACAAGGCAAACAT 58.335 42.857 0.00 0.00 34.69 2.71
208 209 3.030291 TGTTCCAGACAAGGCAAACATT 58.970 40.909 0.00 0.00 34.69 2.71
209 210 3.181477 TGTTCCAGACAAGGCAAACATTG 60.181 43.478 0.00 0.00 34.69 2.82
210 211 2.665165 TCCAGACAAGGCAAACATTGT 58.335 42.857 0.00 0.00 42.17 2.71
211 212 3.030291 TCCAGACAAGGCAAACATTGTT 58.970 40.909 0.00 0.00 39.66 2.83
212 213 3.125316 CCAGACAAGGCAAACATTGTTG 58.875 45.455 2.13 0.00 39.66 3.33
213 214 3.430651 CCAGACAAGGCAAACATTGTTGT 60.431 43.478 2.13 0.00 39.66 3.32
214 215 3.798337 CAGACAAGGCAAACATTGTTGTC 59.202 43.478 14.07 14.07 42.39 3.18
215 216 3.701040 AGACAAGGCAAACATTGTTGTCT 59.299 39.130 16.83 16.83 45.26 3.41
216 217 4.887071 AGACAAGGCAAACATTGTTGTCTA 59.113 37.500 19.25 0.00 46.40 2.59
217 218 5.009010 AGACAAGGCAAACATTGTTGTCTAG 59.991 40.000 19.25 3.29 46.40 2.43
218 219 4.887071 ACAAGGCAAACATTGTTGTCTAGA 59.113 37.500 2.13 0.00 42.56 2.43
219 220 5.359576 ACAAGGCAAACATTGTTGTCTAGAA 59.640 36.000 2.13 0.00 42.56 2.10
220 221 6.127479 ACAAGGCAAACATTGTTGTCTAGAAA 60.127 34.615 2.13 0.00 42.56 2.52
221 222 6.463995 AGGCAAACATTGTTGTCTAGAAAA 57.536 33.333 2.13 0.00 41.60 2.29
222 223 6.872920 AGGCAAACATTGTTGTCTAGAAAAA 58.127 32.000 2.13 0.00 41.60 1.94
223 224 7.500141 AGGCAAACATTGTTGTCTAGAAAAAT 58.500 30.769 2.13 0.00 41.60 1.82
224 225 7.439056 AGGCAAACATTGTTGTCTAGAAAAATG 59.561 33.333 2.13 1.54 41.60 2.32
225 226 7.224557 GGCAAACATTGTTGTCTAGAAAAATGT 59.775 33.333 2.13 7.03 39.30 2.71
226 227 8.057742 GCAAACATTGTTGTCTAGAAAAATGTG 58.942 33.333 11.95 7.12 38.05 3.21
227 228 9.299963 CAAACATTGTTGTCTAGAAAAATGTGA 57.700 29.630 11.95 0.00 38.05 3.58
228 229 9.868277 AAACATTGTTGTCTAGAAAAATGTGAA 57.132 25.926 11.95 0.00 38.05 3.18
230 231 9.467258 ACATTGTTGTCTAGAAAAATGTGAATG 57.533 29.630 10.84 9.89 36.99 2.67
231 232 7.928908 TTGTTGTCTAGAAAAATGTGAATGC 57.071 32.000 0.00 0.00 0.00 3.56
232 233 7.036996 TGTTGTCTAGAAAAATGTGAATGCA 57.963 32.000 0.00 0.00 0.00 3.96
233 234 7.660112 TGTTGTCTAGAAAAATGTGAATGCAT 58.340 30.769 0.00 0.00 0.00 3.96
234 235 8.143193 TGTTGTCTAGAAAAATGTGAATGCATT 58.857 29.630 12.83 12.83 40.43 3.56
236 237 8.746922 TGTCTAGAAAAATGTGAATGCATTTC 57.253 30.769 14.33 10.58 45.17 2.17
237 238 7.538334 TGTCTAGAAAAATGTGAATGCATTTCG 59.462 33.333 14.33 0.00 45.17 3.46
238 239 7.750458 GTCTAGAAAAATGTGAATGCATTTCGA 59.250 33.333 14.33 0.44 45.17 3.71
239 240 6.695292 AGAAAAATGTGAATGCATTTCGAC 57.305 33.333 14.33 11.19 45.17 4.20
240 241 6.215121 AGAAAAATGTGAATGCATTTCGACA 58.785 32.000 14.33 16.15 45.17 4.35
241 242 6.869913 AGAAAAATGTGAATGCATTTCGACAT 59.130 30.769 14.33 17.54 45.17 3.06
242 243 7.385752 AGAAAAATGTGAATGCATTTCGACATT 59.614 29.630 25.06 25.06 45.17 2.71
243 244 8.531622 AAAAATGTGAATGCATTTCGACATTA 57.468 26.923 27.92 13.12 45.17 1.90
244 245 8.531622 AAAATGTGAATGCATTTCGACATTAA 57.468 26.923 27.92 10.98 45.17 1.40
245 246 8.706492 AAATGTGAATGCATTTCGACATTAAT 57.294 26.923 27.92 18.82 43.23 1.40
246 247 8.706492 AATGTGAATGCATTTCGACATTAATT 57.294 26.923 27.24 15.00 40.39 1.40
247 248 9.800433 AATGTGAATGCATTTCGACATTAATTA 57.200 25.926 27.24 7.89 40.39 1.40
248 249 8.839947 TGTGAATGCATTTCGACATTAATTAG 57.160 30.769 14.33 0.00 36.65 1.73
249 250 8.458052 TGTGAATGCATTTCGACATTAATTAGT 58.542 29.630 14.33 0.00 36.65 2.24
250 251 9.289303 GTGAATGCATTTCGACATTAATTAGTT 57.711 29.630 14.33 0.00 36.65 2.24
251 252 9.288124 TGAATGCATTTCGACATTAATTAGTTG 57.712 29.630 14.33 0.00 36.65 3.16
252 253 7.684062 ATGCATTTCGACATTAATTAGTTGC 57.316 32.000 0.00 0.00 0.00 4.17
253 254 5.736824 TGCATTTCGACATTAATTAGTTGCG 59.263 36.000 0.00 0.00 0.00 4.85
254 255 5.171337 GCATTTCGACATTAATTAGTTGCGG 59.829 40.000 0.00 0.00 0.00 5.69
255 256 3.936902 TCGACATTAATTAGTTGCGGC 57.063 42.857 0.00 0.00 0.00 6.53
256 257 2.283086 TCGACATTAATTAGTTGCGGCG 59.717 45.455 0.51 0.51 0.00 6.46
257 258 2.029970 CGACATTAATTAGTTGCGGCGT 59.970 45.455 9.37 0.00 0.00 5.68
258 259 3.604392 GACATTAATTAGTTGCGGCGTC 58.396 45.455 9.37 0.91 0.00 5.19
259 260 2.353579 ACATTAATTAGTTGCGGCGTCC 59.646 45.455 9.37 0.00 0.00 4.79
260 261 1.371595 TTAATTAGTTGCGGCGTCCC 58.628 50.000 9.37 0.00 0.00 4.46
261 262 0.538118 TAATTAGTTGCGGCGTCCCT 59.462 50.000 9.37 4.11 0.00 4.20
262 263 0.538118 AATTAGTTGCGGCGTCCCTA 59.462 50.000 9.37 3.05 0.00 3.53
263 264 0.756903 ATTAGTTGCGGCGTCCCTAT 59.243 50.000 9.37 0.00 0.00 2.57
264 265 0.538118 TTAGTTGCGGCGTCCCTATT 59.462 50.000 9.37 0.00 0.00 1.73
265 266 0.538118 TAGTTGCGGCGTCCCTATTT 59.462 50.000 9.37 0.00 0.00 1.40
266 267 0.322187 AGTTGCGGCGTCCCTATTTT 60.322 50.000 9.37 0.00 0.00 1.82
267 268 0.179174 GTTGCGGCGTCCCTATTTTG 60.179 55.000 9.37 0.00 0.00 2.44
268 269 0.606944 TTGCGGCGTCCCTATTTTGT 60.607 50.000 9.37 0.00 0.00 2.83
269 270 0.606944 TGCGGCGTCCCTATTTTGTT 60.607 50.000 9.37 0.00 0.00 2.83
270 271 1.338864 TGCGGCGTCCCTATTTTGTTA 60.339 47.619 9.37 0.00 0.00 2.41
271 272 1.944709 GCGGCGTCCCTATTTTGTTAT 59.055 47.619 9.37 0.00 0.00 1.89
272 273 2.356695 GCGGCGTCCCTATTTTGTTATT 59.643 45.455 9.37 0.00 0.00 1.40
273 274 3.790789 GCGGCGTCCCTATTTTGTTATTG 60.791 47.826 9.37 0.00 0.00 1.90
274 275 3.375922 CGGCGTCCCTATTTTGTTATTGT 59.624 43.478 0.00 0.00 0.00 2.71
275 276 4.142556 CGGCGTCCCTATTTTGTTATTGTT 60.143 41.667 0.00 0.00 0.00 2.83
276 277 5.620429 CGGCGTCCCTATTTTGTTATTGTTT 60.620 40.000 0.00 0.00 0.00 2.83
277 278 5.575218 GGCGTCCCTATTTTGTTATTGTTTG 59.425 40.000 0.00 0.00 0.00 2.93
278 279 6.153756 GCGTCCCTATTTTGTTATTGTTTGT 58.846 36.000 0.00 0.00 0.00 2.83
279 280 6.088883 GCGTCCCTATTTTGTTATTGTTTGTG 59.911 38.462 0.00 0.00 0.00 3.33
280 281 6.584563 CGTCCCTATTTTGTTATTGTTTGTGG 59.415 38.462 0.00 0.00 0.00 4.17
281 282 6.367695 GTCCCTATTTTGTTATTGTTTGTGGC 59.632 38.462 0.00 0.00 0.00 5.01
282 283 6.042093 TCCCTATTTTGTTATTGTTTGTGGCA 59.958 34.615 0.00 0.00 0.00 4.92
283 284 6.878389 CCCTATTTTGTTATTGTTTGTGGCAT 59.122 34.615 0.00 0.00 0.00 4.40
284 285 7.064490 CCCTATTTTGTTATTGTTTGTGGCATC 59.936 37.037 0.00 0.00 0.00 3.91
285 286 6.799926 ATTTTGTTATTGTTTGTGGCATCC 57.200 33.333 0.00 0.00 0.00 3.51
286 287 3.951775 TGTTATTGTTTGTGGCATCCC 57.048 42.857 0.00 0.00 0.00 3.85
287 288 3.505386 TGTTATTGTTTGTGGCATCCCT 58.495 40.909 0.00 0.00 0.00 4.20
288 289 4.667573 TGTTATTGTTTGTGGCATCCCTA 58.332 39.130 0.00 0.00 0.00 3.53
289 290 5.268387 TGTTATTGTTTGTGGCATCCCTAT 58.732 37.500 0.00 0.00 0.00 2.57
290 291 5.719085 TGTTATTGTTTGTGGCATCCCTATT 59.281 36.000 0.00 0.00 0.00 1.73
291 292 6.212388 TGTTATTGTTTGTGGCATCCCTATTT 59.788 34.615 0.00 0.00 0.00 1.40
292 293 4.799564 TTGTTTGTGGCATCCCTATTTC 57.200 40.909 0.00 0.00 0.00 2.17
293 294 4.046286 TGTTTGTGGCATCCCTATTTCT 57.954 40.909 0.00 0.00 0.00 2.52
294 295 5.186256 TGTTTGTGGCATCCCTATTTCTA 57.814 39.130 0.00 0.00 0.00 2.10
295 296 5.765510 TGTTTGTGGCATCCCTATTTCTAT 58.234 37.500 0.00 0.00 0.00 1.98
296 297 6.194235 TGTTTGTGGCATCCCTATTTCTATT 58.806 36.000 0.00 0.00 0.00 1.73
297 298 6.096705 TGTTTGTGGCATCCCTATTTCTATTG 59.903 38.462 0.00 0.00 0.00 1.90
298 299 5.387113 TGTGGCATCCCTATTTCTATTGT 57.613 39.130 0.00 0.00 0.00 2.71
299 300 5.765510 TGTGGCATCCCTATTTCTATTGTT 58.234 37.500 0.00 0.00 0.00 2.83
300 301 6.194235 TGTGGCATCCCTATTTCTATTGTTT 58.806 36.000 0.00 0.00 0.00 2.83
301 302 6.096705 TGTGGCATCCCTATTTCTATTGTTTG 59.903 38.462 0.00 0.00 0.00 2.93
302 303 6.321181 GTGGCATCCCTATTTCTATTGTTTGA 59.679 38.462 0.00 0.00 0.00 2.69
303 304 6.321181 TGGCATCCCTATTTCTATTGTTTGAC 59.679 38.462 0.00 0.00 0.00 3.18
304 305 6.547510 GGCATCCCTATTTCTATTGTTTGACT 59.452 38.462 0.00 0.00 0.00 3.41
305 306 7.420800 GCATCCCTATTTCTATTGTTTGACTG 58.579 38.462 0.00 0.00 0.00 3.51
306 307 7.067494 GCATCCCTATTTCTATTGTTTGACTGT 59.933 37.037 0.00 0.00 0.00 3.55
307 308 9.613428 CATCCCTATTTCTATTGTTTGACTGTA 57.387 33.333 0.00 0.00 0.00 2.74
316 317 7.806690 TCTATTGTTTGACTGTAAATGACTGC 58.193 34.615 0.00 0.00 0.00 4.40
317 318 6.639632 ATTGTTTGACTGTAAATGACTGCT 57.360 33.333 0.00 0.00 0.00 4.24
318 319 6.449635 TTGTTTGACTGTAAATGACTGCTT 57.550 33.333 0.00 0.00 0.00 3.91
319 320 5.820131 TGTTTGACTGTAAATGACTGCTTG 58.180 37.500 0.00 0.00 0.00 4.01
320 321 5.588246 TGTTTGACTGTAAATGACTGCTTGA 59.412 36.000 0.00 0.00 0.00 3.02
321 322 6.262944 TGTTTGACTGTAAATGACTGCTTGAT 59.737 34.615 0.00 0.00 0.00 2.57
322 323 5.868043 TGACTGTAAATGACTGCTTGATG 57.132 39.130 0.00 0.00 0.00 3.07
323 324 5.550290 TGACTGTAAATGACTGCTTGATGA 58.450 37.500 0.00 0.00 0.00 2.92
324 325 5.997129 TGACTGTAAATGACTGCTTGATGAA 59.003 36.000 0.00 0.00 0.00 2.57
325 326 6.656270 TGACTGTAAATGACTGCTTGATGAAT 59.344 34.615 0.00 0.00 0.00 2.57
326 327 7.175467 TGACTGTAAATGACTGCTTGATGAATT 59.825 33.333 0.00 0.00 0.00 2.17
327 328 7.889469 ACTGTAAATGACTGCTTGATGAATTT 58.111 30.769 0.00 0.00 0.00 1.82
328 329 8.362639 ACTGTAAATGACTGCTTGATGAATTTT 58.637 29.630 0.00 0.00 0.00 1.82
329 330 9.199982 CTGTAAATGACTGCTTGATGAATTTTT 57.800 29.630 0.00 0.00 0.00 1.94
349 350 5.821516 TTTTTACGGAGCTCTTGTTTCAA 57.178 34.783 14.64 1.89 0.00 2.69
350 351 6.385649 TTTTTACGGAGCTCTTGTTTCAAT 57.614 33.333 14.64 0.00 0.00 2.57
351 352 7.499321 TTTTTACGGAGCTCTTGTTTCAATA 57.501 32.000 14.64 0.00 0.00 1.90
352 353 7.681939 TTTTACGGAGCTCTTGTTTCAATAT 57.318 32.000 14.64 0.00 0.00 1.28
353 354 8.780846 TTTTACGGAGCTCTTGTTTCAATATA 57.219 30.769 14.64 0.00 0.00 0.86
354 355 8.958119 TTTACGGAGCTCTTGTTTCAATATAT 57.042 30.769 14.64 0.00 0.00 0.86
355 356 8.958119 TTACGGAGCTCTTGTTTCAATATATT 57.042 30.769 14.64 0.00 0.00 1.28
357 358 8.594881 ACGGAGCTCTTGTTTCAATATATTAG 57.405 34.615 14.64 0.00 0.00 1.73
358 359 7.657761 ACGGAGCTCTTGTTTCAATATATTAGG 59.342 37.037 14.64 0.00 0.00 2.69
359 360 7.657761 CGGAGCTCTTGTTTCAATATATTAGGT 59.342 37.037 14.64 0.00 0.00 3.08
360 361 9.343539 GGAGCTCTTGTTTCAATATATTAGGTT 57.656 33.333 14.64 0.00 0.00 3.50
379 380 4.831674 GTTACTAACCTAGCCCTGGAAA 57.168 45.455 0.00 0.00 0.00 3.13
380 381 5.369409 GTTACTAACCTAGCCCTGGAAAT 57.631 43.478 0.00 0.00 0.00 2.17
381 382 5.752650 GTTACTAACCTAGCCCTGGAAATT 58.247 41.667 0.00 0.00 0.00 1.82
382 383 4.236527 ACTAACCTAGCCCTGGAAATTG 57.763 45.455 0.00 0.00 0.00 2.32
383 384 3.850173 ACTAACCTAGCCCTGGAAATTGA 59.150 43.478 0.00 0.00 0.00 2.57
384 385 3.372440 AACCTAGCCCTGGAAATTGAG 57.628 47.619 0.00 0.00 0.00 3.02
385 386 2.279173 ACCTAGCCCTGGAAATTGAGT 58.721 47.619 0.00 0.00 0.00 3.41
386 387 3.460825 ACCTAGCCCTGGAAATTGAGTA 58.539 45.455 0.00 0.00 0.00 2.59
387 388 3.850173 ACCTAGCCCTGGAAATTGAGTAA 59.150 43.478 0.00 0.00 0.00 2.24
388 389 4.291249 ACCTAGCCCTGGAAATTGAGTAAA 59.709 41.667 0.00 0.00 0.00 2.01
389 390 5.044105 ACCTAGCCCTGGAAATTGAGTAAAT 60.044 40.000 0.00 0.00 0.00 1.40
390 391 6.159751 ACCTAGCCCTGGAAATTGAGTAAATA 59.840 38.462 0.00 0.00 0.00 1.40
391 392 6.486993 CCTAGCCCTGGAAATTGAGTAAATAC 59.513 42.308 0.00 0.00 0.00 1.89
392 393 6.079712 AGCCCTGGAAATTGAGTAAATACT 57.920 37.500 0.00 0.00 39.71 2.12
393 394 5.888161 AGCCCTGGAAATTGAGTAAATACTG 59.112 40.000 0.00 0.00 36.50 2.74
394 395 5.885912 GCCCTGGAAATTGAGTAAATACTGA 59.114 40.000 0.00 0.00 36.50 3.41
395 396 6.183360 GCCCTGGAAATTGAGTAAATACTGAC 60.183 42.308 0.00 0.00 36.50 3.51
396 397 7.112779 CCCTGGAAATTGAGTAAATACTGACT 58.887 38.462 0.00 0.00 36.50 3.41
397 398 7.611855 CCCTGGAAATTGAGTAAATACTGACTT 59.388 37.037 0.00 0.00 36.50 3.01
398 399 9.667107 CCTGGAAATTGAGTAAATACTGACTTA 57.333 33.333 0.00 0.00 36.50 2.24
414 415 9.729281 ATACTGACTTATAAGAGCTAGGTAGTC 57.271 37.037 19.38 11.60 33.25 2.59
415 416 7.575505 ACTGACTTATAAGAGCTAGGTAGTCA 58.424 38.462 19.38 17.55 38.61 3.41
416 417 8.053963 ACTGACTTATAAGAGCTAGGTAGTCAA 58.946 37.037 19.38 7.73 39.89 3.18
417 418 8.818622 TGACTTATAAGAGCTAGGTAGTCAAA 57.181 34.615 19.38 0.21 38.15 2.69
418 419 8.684520 TGACTTATAAGAGCTAGGTAGTCAAAC 58.315 37.037 19.38 0.00 38.15 2.93
419 420 8.591114 ACTTATAAGAGCTAGGTAGTCAAACA 57.409 34.615 19.38 0.00 0.00 2.83
420 421 9.032624 ACTTATAAGAGCTAGGTAGTCAAACAA 57.967 33.333 19.38 0.00 0.00 2.83
422 423 9.817809 TTATAAGAGCTAGGTAGTCAAACAATG 57.182 33.333 0.00 0.00 0.00 2.82
423 424 5.746990 AGAGCTAGGTAGTCAAACAATGT 57.253 39.130 0.00 0.00 0.00 2.71
424 425 6.852420 AGAGCTAGGTAGTCAAACAATGTA 57.148 37.500 0.00 0.00 0.00 2.29
425 426 6.868622 AGAGCTAGGTAGTCAAACAATGTAG 58.131 40.000 0.00 0.00 0.00 2.74
426 427 5.978814 AGCTAGGTAGTCAAACAATGTAGG 58.021 41.667 0.00 0.00 0.00 3.18
427 428 5.720041 AGCTAGGTAGTCAAACAATGTAGGA 59.280 40.000 0.00 0.00 0.00 2.94
428 429 6.043411 GCTAGGTAGTCAAACAATGTAGGAG 58.957 44.000 0.00 0.00 0.00 3.69
429 430 6.127423 GCTAGGTAGTCAAACAATGTAGGAGA 60.127 42.308 0.00 0.00 0.00 3.71
430 431 6.681729 AGGTAGTCAAACAATGTAGGAGAA 57.318 37.500 0.00 0.00 0.00 2.87
431 432 7.074653 AGGTAGTCAAACAATGTAGGAGAAA 57.925 36.000 0.00 0.00 0.00 2.52
432 433 7.690256 AGGTAGTCAAACAATGTAGGAGAAAT 58.310 34.615 0.00 0.00 0.00 2.17
433 434 8.822805 AGGTAGTCAAACAATGTAGGAGAAATA 58.177 33.333 0.00 0.00 0.00 1.40
434 435 9.099454 GGTAGTCAAACAATGTAGGAGAAATAG 57.901 37.037 0.00 0.00 0.00 1.73
435 436 7.617041 AGTCAAACAATGTAGGAGAAATAGC 57.383 36.000 0.00 0.00 0.00 2.97
436 437 7.168219 AGTCAAACAATGTAGGAGAAATAGCA 58.832 34.615 0.00 0.00 0.00 3.49
437 438 7.831193 AGTCAAACAATGTAGGAGAAATAGCAT 59.169 33.333 0.00 0.00 0.00 3.79
438 439 7.912250 GTCAAACAATGTAGGAGAAATAGCATG 59.088 37.037 0.00 0.00 0.00 4.06
439 440 7.828717 TCAAACAATGTAGGAGAAATAGCATGA 59.171 33.333 0.00 0.00 0.00 3.07
440 441 8.627403 CAAACAATGTAGGAGAAATAGCATGAT 58.373 33.333 0.00 0.00 0.00 2.45
441 442 9.851686 AAACAATGTAGGAGAAATAGCATGATA 57.148 29.630 0.00 0.00 0.00 2.15
442 443 9.851686 AACAATGTAGGAGAAATAGCATGATAA 57.148 29.630 0.00 0.00 0.00 1.75
443 444 9.851686 ACAATGTAGGAGAAATAGCATGATAAA 57.148 29.630 0.00 0.00 0.00 1.40
450 451 9.638176 AGGAGAAATAGCATGATAAAATGAACT 57.362 29.630 0.00 0.00 0.00 3.01
451 452 9.890352 GGAGAAATAGCATGATAAAATGAACTC 57.110 33.333 0.00 0.00 0.00 3.01
454 455 9.674824 GAAATAGCATGATAAAATGAACTCAGG 57.325 33.333 0.00 0.00 0.00 3.86
455 456 8.985315 AATAGCATGATAAAATGAACTCAGGA 57.015 30.769 0.00 0.00 0.00 3.86
456 457 8.985315 ATAGCATGATAAAATGAACTCAGGAA 57.015 30.769 0.00 0.00 0.00 3.36
457 458 7.330900 AGCATGATAAAATGAACTCAGGAAG 57.669 36.000 0.00 0.00 0.00 3.46
458 459 7.114754 AGCATGATAAAATGAACTCAGGAAGA 58.885 34.615 0.00 0.00 0.00 2.87
459 460 7.613022 AGCATGATAAAATGAACTCAGGAAGAA 59.387 33.333 0.00 0.00 0.00 2.52
460 461 8.411683 GCATGATAAAATGAACTCAGGAAGAAT 58.588 33.333 0.00 0.00 0.00 2.40
466 467 5.886960 ATGAACTCAGGAAGAATTTTCCG 57.113 39.130 11.38 8.28 43.23 4.30
467 468 4.072131 TGAACTCAGGAAGAATTTTCCGG 58.928 43.478 0.00 0.00 43.23 5.14
518 519 7.574592 GCTCTAAAGATGTGCTCAACAAAAGAT 60.575 37.037 0.00 0.00 43.61 2.40
540 542 2.535331 ACAAATTTTTCGCAGCAACGT 58.465 38.095 0.00 0.00 0.00 3.99
554 556 0.102481 CAACGTGCGGGCTATCTACT 59.898 55.000 0.00 0.00 0.00 2.57
555 557 1.335810 CAACGTGCGGGCTATCTACTA 59.664 52.381 0.00 0.00 0.00 1.82
556 558 0.950116 ACGTGCGGGCTATCTACTAC 59.050 55.000 0.00 0.00 0.00 2.73
557 559 1.236628 CGTGCGGGCTATCTACTACT 58.763 55.000 0.00 0.00 0.00 2.57
558 560 1.197264 CGTGCGGGCTATCTACTACTC 59.803 57.143 0.00 0.00 0.00 2.59
559 561 1.540707 GTGCGGGCTATCTACTACTCC 59.459 57.143 0.00 0.00 0.00 3.85
560 562 1.175654 GCGGGCTATCTACTACTCCC 58.824 60.000 0.00 0.00 0.00 4.30
561 563 1.272037 GCGGGCTATCTACTACTCCCT 60.272 57.143 0.00 0.00 0.00 4.20
562 564 2.713877 CGGGCTATCTACTACTCCCTC 58.286 57.143 0.00 0.00 0.00 4.30
563 565 2.040012 CGGGCTATCTACTACTCCCTCA 59.960 54.545 0.00 0.00 0.00 3.86
564 566 3.692690 GGGCTATCTACTACTCCCTCAG 58.307 54.545 0.00 0.00 0.00 3.35
565 567 3.074836 GGGCTATCTACTACTCCCTCAGT 59.925 52.174 0.00 0.00 39.41 3.41
566 568 4.448054 GGGCTATCTACTACTCCCTCAGTT 60.448 50.000 0.00 0.00 36.43 3.16
567 569 5.141910 GGCTATCTACTACTCCCTCAGTTT 58.858 45.833 0.00 0.00 36.43 2.66
568 570 5.242171 GGCTATCTACTACTCCCTCAGTTTC 59.758 48.000 0.00 0.00 36.43 2.78
569 571 6.066032 GCTATCTACTACTCCCTCAGTTTCT 58.934 44.000 0.00 0.00 36.43 2.52
570 572 7.225725 GCTATCTACTACTCCCTCAGTTTCTA 58.774 42.308 0.00 0.00 36.43 2.10
571 573 7.720515 GCTATCTACTACTCCCTCAGTTTCTAA 59.279 40.741 0.00 0.00 36.43 2.10
572 574 9.629878 CTATCTACTACTCCCTCAGTTTCTAAA 57.370 37.037 0.00 0.00 36.43 1.85
575 577 9.986157 TCTACTACTCCCTCAGTTTCTAAATAA 57.014 33.333 0.00 0.00 36.43 1.40
578 580 9.892130 ACTACTCCCTCAGTTTCTAAATAATTG 57.108 33.333 0.00 0.00 36.43 2.32
579 581 9.892130 CTACTCCCTCAGTTTCTAAATAATTGT 57.108 33.333 0.00 0.00 36.43 2.71
580 582 8.794335 ACTCCCTCAGTTTCTAAATAATTGTC 57.206 34.615 0.00 0.00 26.56 3.18
581 583 8.606830 ACTCCCTCAGTTTCTAAATAATTGTCT 58.393 33.333 0.00 0.00 26.56 3.41
582 584 9.454859 CTCCCTCAGTTTCTAAATAATTGTCTT 57.545 33.333 0.00 0.00 0.00 3.01
583 585 9.807921 TCCCTCAGTTTCTAAATAATTGTCTTT 57.192 29.630 0.00 0.00 0.00 2.52
656 658 7.440523 AGTGTAGATTCACTCATTTTGTTCC 57.559 36.000 0.00 0.00 44.07 3.62
657 659 6.147821 AGTGTAGATTCACTCATTTTGTTCCG 59.852 38.462 0.00 0.00 44.07 4.30
658 660 5.995282 TGTAGATTCACTCATTTTGTTCCGT 59.005 36.000 0.00 0.00 0.00 4.69
659 661 7.117236 GTGTAGATTCACTCATTTTGTTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
660 662 7.822334 TGTAGATTCACTCATTTTGTTCCGTAT 59.178 33.333 0.00 0.00 0.00 3.06
661 663 7.076842 AGATTCACTCATTTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
662 664 6.655003 AGATTCACTCATTTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
663 665 7.822334 AGATTCACTCATTTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
664 666 6.715344 TCACTCATTTTGTTCCGTATGTAC 57.285 37.500 0.00 0.00 0.00 2.90
665 667 6.460781 TCACTCATTTTGTTCCGTATGTACT 58.539 36.000 0.00 0.00 0.00 2.73
666 668 6.588756 TCACTCATTTTGTTCCGTATGTACTC 59.411 38.462 0.00 0.00 0.00 2.59
667 669 6.367695 CACTCATTTTGTTCCGTATGTACTCA 59.632 38.462 0.00 0.00 0.00 3.41
668 670 6.932400 ACTCATTTTGTTCCGTATGTACTCAA 59.068 34.615 0.00 0.00 0.00 3.02
669 671 7.606456 ACTCATTTTGTTCCGTATGTACTCAAT 59.394 33.333 0.00 0.00 0.00 2.57
670 672 8.330466 TCATTTTGTTCCGTATGTACTCAATT 57.670 30.769 0.00 0.00 0.00 2.32
671 673 8.233868 TCATTTTGTTCCGTATGTACTCAATTG 58.766 33.333 0.00 0.00 0.00 2.32
672 674 7.499321 TTTTGTTCCGTATGTACTCAATTGT 57.501 32.000 5.13 0.00 0.00 2.71
673 675 6.474819 TTGTTCCGTATGTACTCAATTGTG 57.525 37.500 5.13 5.59 0.00 3.33
674 676 4.932799 TGTTCCGTATGTACTCAATTGTGG 59.067 41.667 11.89 6.13 0.00 4.17
675 677 5.172934 GTTCCGTATGTACTCAATTGTGGA 58.827 41.667 11.89 0.04 0.00 4.02
676 678 5.408880 TCCGTATGTACTCAATTGTGGAA 57.591 39.130 11.89 0.00 0.00 3.53
677 679 5.795972 TCCGTATGTACTCAATTGTGGAAA 58.204 37.500 11.89 0.00 0.00 3.13
678 680 6.411376 TCCGTATGTACTCAATTGTGGAAAT 58.589 36.000 11.89 6.55 0.00 2.17
679 681 6.537301 TCCGTATGTACTCAATTGTGGAAATC 59.463 38.462 11.89 0.00 0.00 2.17
680 682 6.538742 CCGTATGTACTCAATTGTGGAAATCT 59.461 38.462 11.89 0.00 0.00 2.40
681 683 7.254455 CCGTATGTACTCAATTGTGGAAATCTC 60.254 40.741 11.89 1.53 0.00 2.75
682 684 7.492669 CGTATGTACTCAATTGTGGAAATCTCT 59.507 37.037 11.89 0.00 0.00 3.10
683 685 9.817809 GTATGTACTCAATTGTGGAAATCTCTA 57.182 33.333 11.89 0.00 0.00 2.43
684 686 8.954950 ATGTACTCAATTGTGGAAATCTCTAG 57.045 34.615 11.89 0.00 0.00 2.43
685 687 8.134202 TGTACTCAATTGTGGAAATCTCTAGA 57.866 34.615 11.89 0.00 0.00 2.43
686 688 8.593679 TGTACTCAATTGTGGAAATCTCTAGAA 58.406 33.333 11.89 0.00 0.00 2.10
687 689 9.436957 GTACTCAATTGTGGAAATCTCTAGAAA 57.563 33.333 11.89 0.00 0.00 2.52
688 690 8.558973 ACTCAATTGTGGAAATCTCTAGAAAG 57.441 34.615 11.89 0.00 0.00 2.62
689 691 8.378565 ACTCAATTGTGGAAATCTCTAGAAAGA 58.621 33.333 11.89 0.00 0.00 2.52
690 692 8.553459 TCAATTGTGGAAATCTCTAGAAAGAC 57.447 34.615 5.13 0.00 0.00 3.01
691 693 8.156820 TCAATTGTGGAAATCTCTAGAAAGACA 58.843 33.333 5.13 0.00 0.00 3.41
692 694 8.786898 CAATTGTGGAAATCTCTAGAAAGACAA 58.213 33.333 0.00 0.00 0.00 3.18
693 695 8.924511 ATTGTGGAAATCTCTAGAAAGACAAA 57.075 30.769 0.00 0.00 0.00 2.83
694 696 8.924511 TTGTGGAAATCTCTAGAAAGACAAAT 57.075 30.769 0.00 0.00 0.00 2.32
709 711 9.467796 AGAAAGACAAATATTTAGGAAAGGGAG 57.532 33.333 0.00 0.00 0.00 4.30
771 773 5.197682 ACAACTGCTACGGTATATTCTCC 57.802 43.478 0.00 0.00 0.00 3.71
781 783 7.712205 GCTACGGTATATTCTCCCTTTGTTTTA 59.288 37.037 0.00 0.00 0.00 1.52
784 786 7.012989 ACGGTATATTCTCCCTTTGTTTTATGC 59.987 37.037 0.00 0.00 0.00 3.14
786 788 9.569122 GGTATATTCTCCCTTTGTTTTATGCTA 57.431 33.333 0.00 0.00 0.00 3.49
911 928 6.300354 TCCGCTTTAGCTTATAAAATGAGC 57.700 37.500 0.00 0.00 41.73 4.26
941 958 0.522180 CTCGTCTAGTCAACGGCACT 59.478 55.000 2.99 0.00 40.45 4.40
942 959 0.240145 TCGTCTAGTCAACGGCACTG 59.760 55.000 2.99 0.00 40.45 3.66
943 960 1.344942 CGTCTAGTCAACGGCACTGC 61.345 60.000 0.00 0.00 36.51 4.40
948 965 1.207593 GTCAACGGCACTGCATCAC 59.792 57.895 2.82 0.00 0.00 3.06
983 1000 1.623811 GTTCTCTACAGCCCACCTTGA 59.376 52.381 0.00 0.00 0.00 3.02
997 1014 0.373716 CCTTGACTTTGATACCGCGC 59.626 55.000 0.00 0.00 0.00 6.86
1029 1046 0.387112 CACTACCGGCGTTCGTTGTA 60.387 55.000 6.01 0.00 37.11 2.41
1159 1176 1.214325 CATCTGTACCGCGGTGACA 59.786 57.895 40.02 32.26 0.00 3.58
1206 1223 2.134287 GGTCATCAGGGAGGCGCTA 61.134 63.158 7.64 0.00 0.00 4.26
1402 1419 3.691342 TCTTGGAGGACACGGCCG 61.691 66.667 26.86 26.86 0.00 6.13
1495 1530 2.126812 ACGTCGCGTCAGAAGCTC 60.127 61.111 5.77 0.00 33.69 4.09
1506 1546 2.165437 GTCAGAAGCTCTCAGGTACCAG 59.835 54.545 15.94 6.26 0.00 4.00
1830 1872 1.966451 GGTGTGCGTCCCCTTCTTG 60.966 63.158 0.00 0.00 0.00 3.02
2081 2129 4.069232 CGGGGAACTCTGCAGCGA 62.069 66.667 11.40 0.00 0.00 4.93
2217 2265 1.001860 TCACGGACATGCATTCTGTCA 59.998 47.619 18.11 5.95 43.85 3.58
2447 2499 4.124351 CGCCGGCGACCAACTCTA 62.124 66.667 44.86 0.00 42.83 2.43
2448 2500 2.202756 GCCGGCGACCAACTCTAG 60.203 66.667 12.58 0.00 0.00 2.43
2449 2501 2.202756 CCGGCGACCAACTCTAGC 60.203 66.667 9.30 0.00 0.00 3.42
2450 2502 2.202756 CGGCGACCAACTCTAGCC 60.203 66.667 0.00 0.00 44.00 3.93
2451 2503 2.711922 CGGCGACCAACTCTAGCCT 61.712 63.158 0.00 0.00 45.16 4.58
2452 2504 1.142097 GGCGACCAACTCTAGCCTC 59.858 63.158 0.00 0.00 44.06 4.70
2453 2505 1.324005 GGCGACCAACTCTAGCCTCT 61.324 60.000 0.00 0.00 44.06 3.69
2454 2506 1.390565 GCGACCAACTCTAGCCTCTA 58.609 55.000 0.00 0.00 0.00 2.43
2455 2507 1.335496 GCGACCAACTCTAGCCTCTAG 59.665 57.143 0.00 0.00 0.00 2.43
2456 2508 1.335496 CGACCAACTCTAGCCTCTAGC 59.665 57.143 0.00 0.00 44.25 3.42
2527 2589 5.482006 TGATGCTATGTATATGTCACCTGC 58.518 41.667 0.00 0.00 0.00 4.85
2528 2590 4.271696 TGCTATGTATATGTCACCTGCC 57.728 45.455 0.00 0.00 0.00 4.85
2529 2591 3.903714 TGCTATGTATATGTCACCTGCCT 59.096 43.478 0.00 0.00 0.00 4.75
2530 2592 4.248859 GCTATGTATATGTCACCTGCCTG 58.751 47.826 0.00 0.00 0.00 4.85
2531 2593 2.620251 TGTATATGTCACCTGCCTGC 57.380 50.000 0.00 0.00 0.00 4.85
2532 2594 2.118679 TGTATATGTCACCTGCCTGCT 58.881 47.619 0.00 0.00 0.00 4.24
2548 2610 0.690762 TGCTACAAGTGTTCCCTCCC 59.309 55.000 0.00 0.00 0.00 4.30
2567 2642 5.825151 CCTCCCTTCTTCCATAATTCTTGTC 59.175 44.000 0.00 0.00 0.00 3.18
2615 2694 9.294030 CCAAATCAAAGATTAAGAAATCGAAGG 57.706 33.333 0.00 0.00 45.24 3.46
2625 2704 2.824341 AGAAATCGAAGGAGTGTACGGT 59.176 45.455 0.00 0.00 0.00 4.83
2642 2721 7.554118 AGTGTACGGTACAGTAAGTATGTGTAT 59.446 37.037 23.48 0.00 40.39 2.29
2706 2785 8.784043 ACAAGGTTGAGTCACTTATTTTGATAC 58.216 33.333 0.00 0.00 0.00 2.24
2714 2793 5.753921 GTCACTTATTTTGATACGGAGGGAG 59.246 44.000 0.00 0.00 0.00 4.30
2729 2808 4.633126 CGGAGGGAGTAATATATTCGACGA 59.367 45.833 0.00 0.00 0.00 4.20
2730 2809 5.296283 CGGAGGGAGTAATATATTCGACGAT 59.704 44.000 0.00 0.00 0.00 3.73
2731 2810 6.481313 CGGAGGGAGTAATATATTCGACGATA 59.519 42.308 0.00 0.00 0.00 2.92
2732 2811 7.172875 CGGAGGGAGTAATATATTCGACGATAT 59.827 40.741 0.00 2.04 0.00 1.63
2733 2812 9.499479 GGAGGGAGTAATATATTCGACGATATA 57.501 37.037 0.00 4.20 0.00 0.86
2835 2914 6.304356 TGTGAGAGCAAAACTTGATTACTG 57.696 37.500 0.00 0.00 0.00 2.74
2846 2926 7.964604 AAACTTGATTACTGTTACACCTCTC 57.035 36.000 0.00 0.00 0.00 3.20
2884 2964 5.438761 AACCAACTAGATTGTTTGCACTC 57.561 39.130 0.00 0.00 36.47 3.51
2940 3020 1.175347 TATGCCCTTGCGTTGCAACA 61.175 50.000 28.01 8.05 43.99 3.33
2943 3023 2.336088 CCTTGCGTTGCAACAGGG 59.664 61.111 28.01 15.93 43.99 4.45
3012 3092 0.431233 CGAAAACTGTCTCAGCGACG 59.569 55.000 0.00 0.00 45.87 5.12
3050 3130 6.382608 CAGTCTTCTCTCTCGTCATGTTTTA 58.617 40.000 0.00 0.00 0.00 1.52
3082 3162 1.354101 TGATACTCGTGGGGTTGGTT 58.646 50.000 0.00 0.00 0.00 3.67
3111 3191 2.722094 GGCAACCATCCAACTCATACA 58.278 47.619 0.00 0.00 0.00 2.29
3112 3192 3.290710 GGCAACCATCCAACTCATACAT 58.709 45.455 0.00 0.00 0.00 2.29
3166 3246 1.774217 TTGTGGCCACCTCCTCCTT 60.774 57.895 32.62 0.00 0.00 3.36
3175 3255 2.750350 CTCCTCCTTTGGTGGCGT 59.250 61.111 0.19 0.00 36.40 5.68
3194 3274 2.000447 GTGACGACTATGGTTGCTTCC 59.000 52.381 0.00 0.00 0.00 3.46
3209 3289 3.445008 TGCTTCCACCACTCTCTTCTAT 58.555 45.455 0.00 0.00 0.00 1.98
3220 3300 5.279206 CCACTCTCTTCTATGATGGCGTAAT 60.279 44.000 0.00 0.00 0.00 1.89
3236 3316 5.071250 TGGCGTAATCAGATGGGTTACTAAT 59.929 40.000 0.00 0.00 0.00 1.73
3249 3329 4.527564 GGTTACTAATTGCAGCGCATAAG 58.472 43.478 11.47 0.00 38.76 1.73
3309 6667 9.113838 TGTATGAATTTCTCTTCTTTATCAGGC 57.886 33.333 0.00 0.00 0.00 4.85
3403 6762 1.690219 TTGCCGGTGCCCACAATTTT 61.690 50.000 1.90 0.00 36.33 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.539173 TGATATGTTACAACACACCCTCTTT 58.461 36.000 0.00 0.00 42.51 2.52
1 2 6.121776 TGATATGTTACAACACACCCTCTT 57.878 37.500 0.00 0.00 42.51 2.85
3 4 6.112734 TCATGATATGTTACAACACACCCTC 58.887 40.000 0.00 0.00 42.51 4.30
4 5 6.061022 TCATGATATGTTACAACACACCCT 57.939 37.500 0.00 0.00 42.51 4.34
5 6 6.942532 ATCATGATATGTTACAACACACCC 57.057 37.500 6.36 0.00 42.51 4.61
6 7 7.307160 CGGTATCATGATATGTTACAACACACC 60.307 40.741 18.18 11.20 42.51 4.16
8 9 7.269316 ACGGTATCATGATATGTTACAACACA 58.731 34.615 18.18 0.00 42.51 3.72
9 10 7.709269 ACGGTATCATGATATGTTACAACAC 57.291 36.000 18.18 4.24 42.51 3.32
10 11 9.634163 GATACGGTATCATGATATGTTACAACA 57.366 33.333 18.18 5.37 37.24 3.33
11 12 9.634163 TGATACGGTATCATGATATGTTACAAC 57.366 33.333 23.35 5.64 40.09 3.32
41 42 8.286800 GCATGACACAAAGTAGTACAACATTTA 58.713 33.333 2.52 0.00 0.00 1.40
42 43 7.138736 GCATGACACAAAGTAGTACAACATTT 58.861 34.615 2.52 0.00 0.00 2.32
43 44 6.262049 TGCATGACACAAAGTAGTACAACATT 59.738 34.615 2.52 0.00 0.00 2.71
44 45 5.762711 TGCATGACACAAAGTAGTACAACAT 59.237 36.000 2.52 0.00 0.00 2.71
45 46 5.119694 TGCATGACACAAAGTAGTACAACA 58.880 37.500 2.52 0.00 0.00 3.33
46 47 5.666969 TGCATGACACAAAGTAGTACAAC 57.333 39.130 2.52 0.00 0.00 3.32
47 48 5.181056 CCATGCATGACACAAAGTAGTACAA 59.819 40.000 28.31 0.00 0.00 2.41
48 49 4.694982 CCATGCATGACACAAAGTAGTACA 59.305 41.667 28.31 0.00 0.00 2.90
49 50 4.695455 ACCATGCATGACACAAAGTAGTAC 59.305 41.667 28.31 0.00 0.00 2.73
50 51 4.905429 ACCATGCATGACACAAAGTAGTA 58.095 39.130 28.31 0.00 0.00 1.82
51 52 3.754965 ACCATGCATGACACAAAGTAGT 58.245 40.909 28.31 9.97 0.00 2.73
52 53 5.878332 TTACCATGCATGACACAAAGTAG 57.122 39.130 28.31 9.32 0.00 2.57
53 54 6.832520 AATTACCATGCATGACACAAAGTA 57.167 33.333 28.31 15.65 0.00 2.24
54 55 5.726980 AATTACCATGCATGACACAAAGT 57.273 34.783 28.31 16.65 0.00 2.66
55 56 9.800433 TTATTAATTACCATGCATGACACAAAG 57.200 29.630 28.31 11.52 0.00 2.77
56 57 9.800433 CTTATTAATTACCATGCATGACACAAA 57.200 29.630 28.31 14.11 0.00 2.83
57 58 8.412456 CCTTATTAATTACCATGCATGACACAA 58.588 33.333 28.31 14.95 0.00 3.33
58 59 7.469870 GCCTTATTAATTACCATGCATGACACA 60.470 37.037 28.31 9.11 0.00 3.72
59 60 6.863126 GCCTTATTAATTACCATGCATGACAC 59.137 38.462 28.31 0.00 0.00 3.67
60 61 6.548993 TGCCTTATTAATTACCATGCATGACA 59.451 34.615 28.31 11.99 0.00 3.58
61 62 6.980593 TGCCTTATTAATTACCATGCATGAC 58.019 36.000 28.31 0.00 0.00 3.06
62 63 7.432869 GTTGCCTTATTAATTACCATGCATGA 58.567 34.615 28.31 8.76 0.00 3.07
63 64 6.646240 GGTTGCCTTATTAATTACCATGCATG 59.354 38.462 20.19 20.19 0.00 4.06
64 65 6.554605 AGGTTGCCTTATTAATTACCATGCAT 59.445 34.615 0.00 0.00 0.00 3.96
65 66 5.896678 AGGTTGCCTTATTAATTACCATGCA 59.103 36.000 0.00 0.00 0.00 3.96
66 67 6.405278 AGGTTGCCTTATTAATTACCATGC 57.595 37.500 0.00 0.00 0.00 4.06
67 68 9.349713 TCTTAGGTTGCCTTATTAATTACCATG 57.650 33.333 0.00 0.00 34.61 3.66
80 81 8.989131 TCATAAGTTACTATCTTAGGTTGCCTT 58.011 33.333 0.00 0.00 34.61 4.35
81 82 8.548880 TCATAAGTTACTATCTTAGGTTGCCT 57.451 34.615 0.00 0.00 37.71 4.75
95 96 9.856488 CCGTAATGCATAGTATCATAAGTTACT 57.144 33.333 0.00 0.00 35.17 2.24
96 97 9.850628 TCCGTAATGCATAGTATCATAAGTTAC 57.149 33.333 0.00 0.00 0.00 2.50
98 99 8.035394 CCTCCGTAATGCATAGTATCATAAGTT 58.965 37.037 0.00 0.00 0.00 2.66
99 100 7.178628 ACCTCCGTAATGCATAGTATCATAAGT 59.821 37.037 0.00 0.00 0.00 2.24
100 101 7.548097 ACCTCCGTAATGCATAGTATCATAAG 58.452 38.462 0.00 0.00 0.00 1.73
101 102 7.476540 ACCTCCGTAATGCATAGTATCATAA 57.523 36.000 0.00 0.00 0.00 1.90
102 103 7.832685 ACTACCTCCGTAATGCATAGTATCATA 59.167 37.037 0.00 0.00 0.00 2.15
103 104 6.663953 ACTACCTCCGTAATGCATAGTATCAT 59.336 38.462 0.00 0.00 0.00 2.45
104 105 6.008331 ACTACCTCCGTAATGCATAGTATCA 58.992 40.000 0.00 0.00 0.00 2.15
105 106 6.512342 ACTACCTCCGTAATGCATAGTATC 57.488 41.667 0.00 0.00 0.00 2.24
106 107 7.832685 TGATACTACCTCCGTAATGCATAGTAT 59.167 37.037 11.08 11.08 37.18 2.12
107 108 7.170277 TGATACTACCTCCGTAATGCATAGTA 58.830 38.462 0.00 0.81 0.00 1.82
108 109 6.008331 TGATACTACCTCCGTAATGCATAGT 58.992 40.000 0.00 0.00 0.00 2.12
109 110 6.510879 TGATACTACCTCCGTAATGCATAG 57.489 41.667 0.00 0.00 0.00 2.23
110 111 8.630037 CATATGATACTACCTCCGTAATGCATA 58.370 37.037 0.00 0.00 0.00 3.14
111 112 7.492524 CATATGATACTACCTCCGTAATGCAT 58.507 38.462 0.00 0.00 0.00 3.96
112 113 6.627287 GCATATGATACTACCTCCGTAATGCA 60.627 42.308 6.97 0.00 0.00 3.96
113 114 5.749109 GCATATGATACTACCTCCGTAATGC 59.251 44.000 6.97 0.00 0.00 3.56
114 115 6.863275 TGCATATGATACTACCTCCGTAATG 58.137 40.000 6.97 0.00 0.00 1.90
115 116 7.342026 TCATGCATATGATACTACCTCCGTAAT 59.658 37.037 6.97 0.00 38.37 1.89
116 117 6.661805 TCATGCATATGATACTACCTCCGTAA 59.338 38.462 6.97 0.00 38.37 3.18
117 118 6.184789 TCATGCATATGATACTACCTCCGTA 58.815 40.000 6.97 0.00 38.37 4.02
118 119 5.016831 TCATGCATATGATACTACCTCCGT 58.983 41.667 6.97 0.00 38.37 4.69
119 120 5.582689 TCATGCATATGATACTACCTCCG 57.417 43.478 6.97 0.00 38.37 4.63
146 147 9.122954 TGGTTGTAATGGGGAGTATCATATATT 57.877 33.333 0.00 0.00 36.25 1.28
147 148 8.694171 TGGTTGTAATGGGGAGTATCATATAT 57.306 34.615 0.00 0.00 36.25 0.86
148 149 7.311046 GCTGGTTGTAATGGGGAGTATCATATA 60.311 40.741 0.00 0.00 36.25 0.86
149 150 6.522459 GCTGGTTGTAATGGGGAGTATCATAT 60.522 42.308 0.00 0.00 36.25 1.78
150 151 5.221843 GCTGGTTGTAATGGGGAGTATCATA 60.222 44.000 0.00 0.00 36.25 2.15
151 152 4.446311 GCTGGTTGTAATGGGGAGTATCAT 60.446 45.833 0.00 0.00 36.25 2.45
152 153 3.118038 GCTGGTTGTAATGGGGAGTATCA 60.118 47.826 0.00 0.00 36.25 2.15
153 154 3.477530 GCTGGTTGTAATGGGGAGTATC 58.522 50.000 0.00 0.00 0.00 2.24
154 155 2.174854 GGCTGGTTGTAATGGGGAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
155 156 1.562475 GGCTGGTTGTAATGGGGAGTA 59.438 52.381 0.00 0.00 0.00 2.59
156 157 0.331616 GGCTGGTTGTAATGGGGAGT 59.668 55.000 0.00 0.00 0.00 3.85
157 158 0.625849 AGGCTGGTTGTAATGGGGAG 59.374 55.000 0.00 0.00 0.00 4.30
158 159 1.080638 AAGGCTGGTTGTAATGGGGA 58.919 50.000 0.00 0.00 0.00 4.81
159 160 2.025321 ACTAAGGCTGGTTGTAATGGGG 60.025 50.000 0.00 0.00 0.00 4.96
160 161 3.054361 AGACTAAGGCTGGTTGTAATGGG 60.054 47.826 0.00 0.00 0.00 4.00
161 162 4.192317 GAGACTAAGGCTGGTTGTAATGG 58.808 47.826 0.00 0.00 0.00 3.16
162 163 3.865745 CGAGACTAAGGCTGGTTGTAATG 59.134 47.826 0.00 0.00 0.00 1.90
163 164 3.514309 ACGAGACTAAGGCTGGTTGTAAT 59.486 43.478 0.00 0.00 0.00 1.89
164 165 2.895404 ACGAGACTAAGGCTGGTTGTAA 59.105 45.455 0.00 0.00 0.00 2.41
165 166 2.522185 ACGAGACTAAGGCTGGTTGTA 58.478 47.619 0.00 0.00 0.00 2.41
166 167 1.339097 ACGAGACTAAGGCTGGTTGT 58.661 50.000 0.00 0.00 0.00 3.32
167 168 3.119101 ACATACGAGACTAAGGCTGGTTG 60.119 47.826 0.00 0.00 0.00 3.77
168 169 3.097614 ACATACGAGACTAAGGCTGGTT 58.902 45.455 0.00 0.00 0.00 3.67
169 170 2.736347 ACATACGAGACTAAGGCTGGT 58.264 47.619 0.00 0.00 0.00 4.00
170 171 3.491104 GGAACATACGAGACTAAGGCTGG 60.491 52.174 0.00 0.00 0.00 4.85
171 172 3.130516 TGGAACATACGAGACTAAGGCTG 59.869 47.826 0.00 0.00 0.00 4.85
172 173 3.362706 TGGAACATACGAGACTAAGGCT 58.637 45.455 0.00 0.00 0.00 4.58
173 174 3.380637 TCTGGAACATACGAGACTAAGGC 59.619 47.826 0.00 0.00 38.20 4.35
174 175 4.398358 TGTCTGGAACATACGAGACTAAGG 59.602 45.833 0.00 0.00 42.91 2.69
175 176 5.562506 TGTCTGGAACATACGAGACTAAG 57.437 43.478 0.00 0.00 42.91 2.18
176 177 5.105877 CCTTGTCTGGAACATACGAGACTAA 60.106 44.000 0.00 0.00 46.15 2.24
177 178 4.398358 CCTTGTCTGGAACATACGAGACTA 59.602 45.833 0.00 0.00 46.15 2.59
178 179 3.193691 CCTTGTCTGGAACATACGAGACT 59.806 47.826 0.00 0.00 46.15 3.24
179 180 3.512680 CCTTGTCTGGAACATACGAGAC 58.487 50.000 0.00 0.00 46.15 3.36
180 181 2.094182 GCCTTGTCTGGAACATACGAGA 60.094 50.000 0.00 0.00 46.15 4.04
181 182 2.271800 GCCTTGTCTGGAACATACGAG 58.728 52.381 0.00 0.00 43.85 4.18
182 183 1.621317 TGCCTTGTCTGGAACATACGA 59.379 47.619 0.00 0.00 38.33 3.43
183 184 2.093306 TGCCTTGTCTGGAACATACG 57.907 50.000 0.00 0.00 38.33 3.06
184 185 3.568007 TGTTTGCCTTGTCTGGAACATAC 59.432 43.478 0.00 0.00 37.82 2.39
185 186 3.826524 TGTTTGCCTTGTCTGGAACATA 58.173 40.909 0.00 0.00 37.82 2.29
186 187 2.665165 TGTTTGCCTTGTCTGGAACAT 58.335 42.857 0.00 0.00 37.82 2.71
187 188 2.136298 TGTTTGCCTTGTCTGGAACA 57.864 45.000 0.00 0.00 35.59 3.18
188 189 3.181476 ACAATGTTTGCCTTGTCTGGAAC 60.181 43.478 0.00 0.00 29.48 3.62
189 190 3.030291 ACAATGTTTGCCTTGTCTGGAA 58.970 40.909 0.00 0.00 29.48 3.53
190 191 2.665165 ACAATGTTTGCCTTGTCTGGA 58.335 42.857 0.00 0.00 29.48 3.86
191 192 3.125316 CAACAATGTTTGCCTTGTCTGG 58.875 45.455 0.00 0.00 33.40 3.86
192 193 3.784338 ACAACAATGTTTGCCTTGTCTG 58.216 40.909 0.00 0.00 35.91 3.51
193 194 3.701040 AGACAACAATGTTTGCCTTGTCT 59.299 39.130 15.14 15.14 44.92 3.41
194 195 4.045636 AGACAACAATGTTTGCCTTGTC 57.954 40.909 12.31 12.31 42.39 3.18
195 196 4.887071 TCTAGACAACAATGTTTGCCTTGT 59.113 37.500 0.00 0.00 40.74 3.16
196 197 5.437289 TCTAGACAACAATGTTTGCCTTG 57.563 39.130 0.00 0.00 40.74 3.61
197 198 6.463995 TTTCTAGACAACAATGTTTGCCTT 57.536 33.333 0.00 0.00 40.74 4.35
198 199 6.463995 TTTTCTAGACAACAATGTTTGCCT 57.536 33.333 0.00 0.00 40.74 4.75
199 200 7.224557 ACATTTTTCTAGACAACAATGTTTGCC 59.775 33.333 0.00 0.00 40.74 4.52
200 201 8.057742 CACATTTTTCTAGACAACAATGTTTGC 58.942 33.333 12.27 0.00 40.74 3.68
201 202 9.299963 TCACATTTTTCTAGACAACAATGTTTG 57.700 29.630 12.27 0.00 40.74 2.93
202 203 9.868277 TTCACATTTTTCTAGACAACAATGTTT 57.132 25.926 12.27 0.00 40.74 2.83
204 205 9.467258 CATTCACATTTTTCTAGACAACAATGT 57.533 29.630 10.28 10.28 44.25 2.71
205 206 8.430063 GCATTCACATTTTTCTAGACAACAATG 58.570 33.333 0.00 1.71 0.00 2.82
206 207 8.143193 TGCATTCACATTTTTCTAGACAACAAT 58.857 29.630 0.00 0.00 0.00 2.71
207 208 7.487484 TGCATTCACATTTTTCTAGACAACAA 58.513 30.769 0.00 0.00 0.00 2.83
208 209 7.036996 TGCATTCACATTTTTCTAGACAACA 57.963 32.000 0.00 0.00 0.00 3.33
209 210 8.524870 AATGCATTCACATTTTTCTAGACAAC 57.475 30.769 5.99 0.00 36.91 3.32
221 222 8.706492 AATTAATGTCGAAATGCATTCACATT 57.294 26.923 28.98 28.98 43.74 2.71
222 223 9.454585 CTAATTAATGTCGAAATGCATTCACAT 57.545 29.630 13.38 16.96 39.39 3.21
223 224 8.458052 ACTAATTAATGTCGAAATGCATTCACA 58.542 29.630 13.38 15.51 37.96 3.58
224 225 8.841444 ACTAATTAATGTCGAAATGCATTCAC 57.159 30.769 13.38 10.39 37.96 3.18
225 226 9.288124 CAACTAATTAATGTCGAAATGCATTCA 57.712 29.630 13.38 6.70 37.96 2.57
226 227 8.261908 GCAACTAATTAATGTCGAAATGCATTC 58.738 33.333 13.38 5.66 36.75 2.67
227 228 7.044117 CGCAACTAATTAATGTCGAAATGCATT 60.044 33.333 5.99 5.99 38.63 3.56
228 229 6.414694 CGCAACTAATTAATGTCGAAATGCAT 59.585 34.615 0.00 0.00 0.00 3.96
229 230 5.736824 CGCAACTAATTAATGTCGAAATGCA 59.263 36.000 0.00 0.00 0.00 3.96
230 231 5.171337 CCGCAACTAATTAATGTCGAAATGC 59.829 40.000 0.00 0.00 0.00 3.56
231 232 5.171337 GCCGCAACTAATTAATGTCGAAATG 59.829 40.000 0.00 0.00 0.00 2.32
232 233 5.270853 GCCGCAACTAATTAATGTCGAAAT 58.729 37.500 0.00 0.00 0.00 2.17
233 234 4.654015 GCCGCAACTAATTAATGTCGAAA 58.346 39.130 0.00 0.00 0.00 3.46
234 235 3.242155 CGCCGCAACTAATTAATGTCGAA 60.242 43.478 0.00 0.00 0.00 3.71
235 236 2.283086 CGCCGCAACTAATTAATGTCGA 59.717 45.455 12.18 0.00 0.00 4.20
236 237 2.029970 ACGCCGCAACTAATTAATGTCG 59.970 45.455 0.00 0.00 0.00 4.35
237 238 3.545426 GGACGCCGCAACTAATTAATGTC 60.545 47.826 0.00 0.00 0.00 3.06
238 239 2.353579 GGACGCCGCAACTAATTAATGT 59.646 45.455 0.00 0.00 0.00 2.71
239 240 2.286772 GGGACGCCGCAACTAATTAATG 60.287 50.000 0.00 0.00 0.00 1.90
240 241 1.944709 GGGACGCCGCAACTAATTAAT 59.055 47.619 0.00 0.00 0.00 1.40
241 242 1.065998 AGGGACGCCGCAACTAATTAA 60.066 47.619 0.00 0.00 0.00 1.40
242 243 0.538118 AGGGACGCCGCAACTAATTA 59.462 50.000 0.00 0.00 0.00 1.40
243 244 0.538118 TAGGGACGCCGCAACTAATT 59.462 50.000 0.00 0.00 0.00 1.40
244 245 0.756903 ATAGGGACGCCGCAACTAAT 59.243 50.000 0.00 0.00 0.00 1.73
245 246 0.538118 AATAGGGACGCCGCAACTAA 59.462 50.000 0.00 0.00 0.00 2.24
246 247 0.538118 AAATAGGGACGCCGCAACTA 59.462 50.000 0.00 0.00 0.00 2.24
247 248 0.322187 AAAATAGGGACGCCGCAACT 60.322 50.000 0.00 0.00 0.00 3.16
248 249 0.179174 CAAAATAGGGACGCCGCAAC 60.179 55.000 0.00 0.00 0.00 4.17
249 250 0.606944 ACAAAATAGGGACGCCGCAA 60.607 50.000 0.00 0.00 0.00 4.85
250 251 0.606944 AACAAAATAGGGACGCCGCA 60.607 50.000 0.00 0.00 0.00 5.69
251 252 1.371595 TAACAAAATAGGGACGCCGC 58.628 50.000 0.00 0.00 0.00 6.53
252 253 3.375922 ACAATAACAAAATAGGGACGCCG 59.624 43.478 0.00 0.00 0.00 6.46
253 254 4.976224 ACAATAACAAAATAGGGACGCC 57.024 40.909 0.00 0.00 0.00 5.68
254 255 6.088883 CACAAACAATAACAAAATAGGGACGC 59.911 38.462 0.00 0.00 0.00 5.19
255 256 6.584563 CCACAAACAATAACAAAATAGGGACG 59.415 38.462 0.00 0.00 0.00 4.79
256 257 6.367695 GCCACAAACAATAACAAAATAGGGAC 59.632 38.462 0.00 0.00 0.00 4.46
257 258 6.042093 TGCCACAAACAATAACAAAATAGGGA 59.958 34.615 0.00 0.00 0.00 4.20
258 259 6.226787 TGCCACAAACAATAACAAAATAGGG 58.773 36.000 0.00 0.00 0.00 3.53
259 260 7.064490 GGATGCCACAAACAATAACAAAATAGG 59.936 37.037 0.00 0.00 0.00 2.57
260 261 7.064490 GGGATGCCACAAACAATAACAAAATAG 59.936 37.037 0.00 0.00 0.00 1.73
261 262 6.876257 GGGATGCCACAAACAATAACAAAATA 59.124 34.615 0.00 0.00 0.00 1.40
262 263 5.704978 GGGATGCCACAAACAATAACAAAAT 59.295 36.000 0.00 0.00 0.00 1.82
263 264 5.059833 GGGATGCCACAAACAATAACAAAA 58.940 37.500 0.00 0.00 0.00 2.44
264 265 4.346418 AGGGATGCCACAAACAATAACAAA 59.654 37.500 5.86 0.00 0.00 2.83
265 266 3.900601 AGGGATGCCACAAACAATAACAA 59.099 39.130 5.86 0.00 0.00 2.83
266 267 3.505386 AGGGATGCCACAAACAATAACA 58.495 40.909 5.86 0.00 0.00 2.41
267 268 5.852282 ATAGGGATGCCACAAACAATAAC 57.148 39.130 5.86 0.00 0.00 1.89
268 269 6.667414 AGAAATAGGGATGCCACAAACAATAA 59.333 34.615 5.86 0.00 0.00 1.40
269 270 6.194235 AGAAATAGGGATGCCACAAACAATA 58.806 36.000 5.86 0.00 0.00 1.90
270 271 5.025453 AGAAATAGGGATGCCACAAACAAT 58.975 37.500 5.86 0.00 0.00 2.71
271 272 4.415596 AGAAATAGGGATGCCACAAACAA 58.584 39.130 5.86 0.00 0.00 2.83
272 273 4.046286 AGAAATAGGGATGCCACAAACA 57.954 40.909 5.86 0.00 0.00 2.83
273 274 6.096846 ACAATAGAAATAGGGATGCCACAAAC 59.903 38.462 5.86 0.00 0.00 2.93
274 275 6.194235 ACAATAGAAATAGGGATGCCACAAA 58.806 36.000 5.86 0.00 0.00 2.83
275 276 5.765510 ACAATAGAAATAGGGATGCCACAA 58.234 37.500 5.86 0.00 0.00 3.33
276 277 5.387113 ACAATAGAAATAGGGATGCCACA 57.613 39.130 5.86 0.00 0.00 4.17
277 278 6.321181 TCAAACAATAGAAATAGGGATGCCAC 59.679 38.462 5.86 0.00 0.00 5.01
278 279 6.321181 GTCAAACAATAGAAATAGGGATGCCA 59.679 38.462 5.86 0.00 0.00 4.92
279 280 6.547510 AGTCAAACAATAGAAATAGGGATGCC 59.452 38.462 0.00 0.00 0.00 4.40
280 281 7.067494 ACAGTCAAACAATAGAAATAGGGATGC 59.933 37.037 0.00 0.00 0.00 3.91
281 282 8.511604 ACAGTCAAACAATAGAAATAGGGATG 57.488 34.615 0.00 0.00 0.00 3.51
290 291 8.289618 GCAGTCATTTACAGTCAAACAATAGAA 58.710 33.333 0.00 0.00 0.00 2.10
291 292 7.661437 AGCAGTCATTTACAGTCAAACAATAGA 59.339 33.333 0.00 0.00 0.00 1.98
292 293 7.810658 AGCAGTCATTTACAGTCAAACAATAG 58.189 34.615 0.00 0.00 0.00 1.73
293 294 7.744087 AGCAGTCATTTACAGTCAAACAATA 57.256 32.000 0.00 0.00 0.00 1.90
294 295 6.639632 AGCAGTCATTTACAGTCAAACAAT 57.360 33.333 0.00 0.00 0.00 2.71
295 296 6.094742 TCAAGCAGTCATTTACAGTCAAACAA 59.905 34.615 0.00 0.00 0.00 2.83
296 297 5.588246 TCAAGCAGTCATTTACAGTCAAACA 59.412 36.000 0.00 0.00 0.00 2.83
297 298 6.060028 TCAAGCAGTCATTTACAGTCAAAC 57.940 37.500 0.00 0.00 0.00 2.93
298 299 6.486320 TCATCAAGCAGTCATTTACAGTCAAA 59.514 34.615 0.00 0.00 0.00 2.69
299 300 5.997129 TCATCAAGCAGTCATTTACAGTCAA 59.003 36.000 0.00 0.00 0.00 3.18
300 301 5.550290 TCATCAAGCAGTCATTTACAGTCA 58.450 37.500 0.00 0.00 0.00 3.41
301 302 6.486253 TTCATCAAGCAGTCATTTACAGTC 57.514 37.500 0.00 0.00 0.00 3.51
302 303 7.458409 AATTCATCAAGCAGTCATTTACAGT 57.542 32.000 0.00 0.00 0.00 3.55
303 304 8.752766 AAAATTCATCAAGCAGTCATTTACAG 57.247 30.769 0.00 0.00 0.00 2.74
327 328 5.821516 TTGAAACAAGAGCTCCGTAAAAA 57.178 34.783 10.93 1.16 0.00 1.94
328 329 7.681939 ATATTGAAACAAGAGCTCCGTAAAA 57.318 32.000 10.93 4.50 0.00 1.52
329 330 8.958119 ATATATTGAAACAAGAGCTCCGTAAA 57.042 30.769 10.93 4.83 0.00 2.01
330 331 8.958119 AATATATTGAAACAAGAGCTCCGTAA 57.042 30.769 10.93 0.20 0.00 3.18
331 332 9.692749 CTAATATATTGAAACAAGAGCTCCGTA 57.307 33.333 10.93 0.00 0.00 4.02
332 333 7.657761 CCTAATATATTGAAACAAGAGCTCCGT 59.342 37.037 10.93 5.20 0.00 4.69
333 334 7.657761 ACCTAATATATTGAAACAAGAGCTCCG 59.342 37.037 10.93 4.45 0.00 4.63
334 335 8.910351 ACCTAATATATTGAAACAAGAGCTCC 57.090 34.615 10.93 0.00 0.00 4.70
358 359 4.831674 TTTCCAGGGCTAGGTTAGTAAC 57.168 45.455 4.32 4.32 0.00 2.50
359 360 5.489637 TCAATTTCCAGGGCTAGGTTAGTAA 59.510 40.000 0.00 0.00 0.00 2.24
360 361 5.034200 TCAATTTCCAGGGCTAGGTTAGTA 58.966 41.667 0.00 0.00 0.00 1.82
361 362 3.850173 TCAATTTCCAGGGCTAGGTTAGT 59.150 43.478 0.00 0.00 0.00 2.24
362 363 4.080299 ACTCAATTTCCAGGGCTAGGTTAG 60.080 45.833 0.00 0.00 0.00 2.34
363 364 3.850173 ACTCAATTTCCAGGGCTAGGTTA 59.150 43.478 0.00 0.00 0.00 2.85
364 365 2.649816 ACTCAATTTCCAGGGCTAGGTT 59.350 45.455 0.00 0.00 0.00 3.50
365 366 2.279173 ACTCAATTTCCAGGGCTAGGT 58.721 47.619 0.00 0.00 0.00 3.08
366 367 4.503714 TTACTCAATTTCCAGGGCTAGG 57.496 45.455 0.00 0.00 0.00 3.02
367 368 7.227512 CAGTATTTACTCAATTTCCAGGGCTAG 59.772 40.741 0.00 0.00 33.46 3.42
368 369 7.054124 CAGTATTTACTCAATTTCCAGGGCTA 58.946 38.462 0.00 0.00 33.46 3.93
369 370 5.888161 CAGTATTTACTCAATTTCCAGGGCT 59.112 40.000 0.00 0.00 33.46 5.19
370 371 5.885912 TCAGTATTTACTCAATTTCCAGGGC 59.114 40.000 0.00 0.00 33.46 5.19
371 372 7.112779 AGTCAGTATTTACTCAATTTCCAGGG 58.887 38.462 0.00 0.00 33.46 4.45
372 373 8.567285 AAGTCAGTATTTACTCAATTTCCAGG 57.433 34.615 0.00 0.00 33.46 4.45
388 389 9.729281 GACTACCTAGCTCTTATAAGTCAGTAT 57.271 37.037 12.19 0.72 33.86 2.12
389 390 8.712103 TGACTACCTAGCTCTTATAAGTCAGTA 58.288 37.037 12.19 6.44 37.70 2.74
390 391 7.575505 TGACTACCTAGCTCTTATAAGTCAGT 58.424 38.462 12.19 5.20 37.70 3.41
391 392 8.453238 TTGACTACCTAGCTCTTATAAGTCAG 57.547 38.462 12.19 4.77 41.99 3.51
392 393 8.684520 GTTTGACTACCTAGCTCTTATAAGTCA 58.315 37.037 12.19 10.66 40.06 3.41
393 394 8.684520 TGTTTGACTACCTAGCTCTTATAAGTC 58.315 37.037 12.19 5.99 34.18 3.01
394 395 8.591114 TGTTTGACTACCTAGCTCTTATAAGT 57.409 34.615 12.19 0.00 0.00 2.24
396 397 9.817809 CATTGTTTGACTACCTAGCTCTTATAA 57.182 33.333 0.00 0.00 0.00 0.98
397 398 8.978472 ACATTGTTTGACTACCTAGCTCTTATA 58.022 33.333 0.00 0.00 0.00 0.98
398 399 7.852263 ACATTGTTTGACTACCTAGCTCTTAT 58.148 34.615 0.00 0.00 0.00 1.73
399 400 7.241042 ACATTGTTTGACTACCTAGCTCTTA 57.759 36.000 0.00 0.00 0.00 2.10
400 401 6.115448 ACATTGTTTGACTACCTAGCTCTT 57.885 37.500 0.00 0.00 0.00 2.85
401 402 5.746990 ACATTGTTTGACTACCTAGCTCT 57.253 39.130 0.00 0.00 0.00 4.09
402 403 6.043411 CCTACATTGTTTGACTACCTAGCTC 58.957 44.000 0.00 0.00 0.00 4.09
403 404 5.720041 TCCTACATTGTTTGACTACCTAGCT 59.280 40.000 0.00 0.00 0.00 3.32
404 405 5.974108 TCCTACATTGTTTGACTACCTAGC 58.026 41.667 0.00 0.00 0.00 3.42
405 406 7.406031 TCTCCTACATTGTTTGACTACCTAG 57.594 40.000 0.00 0.00 0.00 3.02
406 407 7.786046 TTCTCCTACATTGTTTGACTACCTA 57.214 36.000 0.00 0.00 0.00 3.08
407 408 6.681729 TTCTCCTACATTGTTTGACTACCT 57.318 37.500 0.00 0.00 0.00 3.08
408 409 7.923414 ATTTCTCCTACATTGTTTGACTACC 57.077 36.000 0.00 0.00 0.00 3.18
409 410 8.604890 GCTATTTCTCCTACATTGTTTGACTAC 58.395 37.037 0.00 0.00 0.00 2.73
410 411 8.318412 TGCTATTTCTCCTACATTGTTTGACTA 58.682 33.333 0.00 0.00 0.00 2.59
411 412 7.168219 TGCTATTTCTCCTACATTGTTTGACT 58.832 34.615 0.00 0.00 0.00 3.41
412 413 7.377766 TGCTATTTCTCCTACATTGTTTGAC 57.622 36.000 0.00 0.00 0.00 3.18
413 414 7.828717 TCATGCTATTTCTCCTACATTGTTTGA 59.171 33.333 0.00 0.00 0.00 2.69
414 415 7.988737 TCATGCTATTTCTCCTACATTGTTTG 58.011 34.615 0.00 0.00 0.00 2.93
415 416 8.757982 ATCATGCTATTTCTCCTACATTGTTT 57.242 30.769 0.00 0.00 0.00 2.83
416 417 9.851686 TTATCATGCTATTTCTCCTACATTGTT 57.148 29.630 0.00 0.00 0.00 2.83
417 418 9.851686 TTTATCATGCTATTTCTCCTACATTGT 57.148 29.630 0.00 0.00 0.00 2.71
424 425 9.638176 AGTTCATTTTATCATGCTATTTCTCCT 57.362 29.630 0.00 0.00 0.00 3.69
425 426 9.890352 GAGTTCATTTTATCATGCTATTTCTCC 57.110 33.333 0.00 0.00 0.00 3.71
428 429 9.674824 CCTGAGTTCATTTTATCATGCTATTTC 57.325 33.333 0.00 0.00 0.00 2.17
429 430 9.412460 TCCTGAGTTCATTTTATCATGCTATTT 57.588 29.630 0.00 0.00 0.00 1.40
430 431 8.985315 TCCTGAGTTCATTTTATCATGCTATT 57.015 30.769 0.00 0.00 0.00 1.73
431 432 8.985315 TTCCTGAGTTCATTTTATCATGCTAT 57.015 30.769 0.00 0.00 0.00 2.97
432 433 8.267183 TCTTCCTGAGTTCATTTTATCATGCTA 58.733 33.333 0.00 0.00 0.00 3.49
433 434 7.114754 TCTTCCTGAGTTCATTTTATCATGCT 58.885 34.615 0.00 0.00 0.00 3.79
434 435 7.325660 TCTTCCTGAGTTCATTTTATCATGC 57.674 36.000 0.00 0.00 0.00 4.06
440 441 8.296713 CGGAAAATTCTTCCTGAGTTCATTTTA 58.703 33.333 13.84 0.00 36.45 1.52
441 442 7.147976 CGGAAAATTCTTCCTGAGTTCATTTT 58.852 34.615 13.84 0.00 36.45 1.82
442 443 6.294731 CCGGAAAATTCTTCCTGAGTTCATTT 60.295 38.462 0.00 0.00 36.45 2.32
443 444 5.183904 CCGGAAAATTCTTCCTGAGTTCATT 59.816 40.000 0.00 0.00 36.45 2.57
444 445 4.702131 CCGGAAAATTCTTCCTGAGTTCAT 59.298 41.667 0.00 0.00 36.45 2.57
445 446 4.072131 CCGGAAAATTCTTCCTGAGTTCA 58.928 43.478 0.00 0.00 36.45 3.18
446 447 4.072839 ACCGGAAAATTCTTCCTGAGTTC 58.927 43.478 9.46 0.00 36.45 3.01
447 448 4.100279 ACCGGAAAATTCTTCCTGAGTT 57.900 40.909 9.46 0.00 36.45 3.01
448 449 3.790089 ACCGGAAAATTCTTCCTGAGT 57.210 42.857 9.46 8.23 36.45 3.41
449 450 3.623510 GCTACCGGAAAATTCTTCCTGAG 59.376 47.826 9.46 10.15 36.45 3.35
450 451 3.606687 GCTACCGGAAAATTCTTCCTGA 58.393 45.455 9.46 3.26 36.45 3.86
451 452 2.683362 GGCTACCGGAAAATTCTTCCTG 59.317 50.000 9.46 11.07 36.45 3.86
452 453 2.307686 TGGCTACCGGAAAATTCTTCCT 59.692 45.455 9.46 0.00 36.45 3.36
453 454 2.683362 CTGGCTACCGGAAAATTCTTCC 59.317 50.000 9.46 8.52 35.27 3.46
454 455 3.344515 ACTGGCTACCGGAAAATTCTTC 58.655 45.455 9.46 0.00 33.36 2.87
455 456 3.434940 ACTGGCTACCGGAAAATTCTT 57.565 42.857 9.46 0.00 33.36 2.52
456 457 3.434940 AACTGGCTACCGGAAAATTCT 57.565 42.857 9.46 0.00 33.36 2.40
457 458 5.355910 TCATAAACTGGCTACCGGAAAATTC 59.644 40.000 9.46 0.00 33.36 2.17
458 459 5.258051 TCATAAACTGGCTACCGGAAAATT 58.742 37.500 9.46 0.00 33.36 1.82
459 460 4.850680 TCATAAACTGGCTACCGGAAAAT 58.149 39.130 9.46 0.00 33.36 1.82
460 461 4.289238 TCATAAACTGGCTACCGGAAAA 57.711 40.909 9.46 0.00 33.36 2.29
461 462 3.985019 TCATAAACTGGCTACCGGAAA 57.015 42.857 9.46 0.00 33.36 3.13
462 463 3.985019 TTCATAAACTGGCTACCGGAA 57.015 42.857 9.46 0.00 33.36 4.30
463 464 4.196193 CAATTCATAAACTGGCTACCGGA 58.804 43.478 9.46 0.00 33.36 5.14
464 465 3.945285 ACAATTCATAAACTGGCTACCGG 59.055 43.478 0.00 0.00 35.68 5.28
465 466 4.394920 ACACAATTCATAAACTGGCTACCG 59.605 41.667 0.00 0.00 0.00 4.02
466 467 5.897377 ACACAATTCATAAACTGGCTACC 57.103 39.130 0.00 0.00 0.00 3.18
467 468 7.432252 GCATAACACAATTCATAAACTGGCTAC 59.568 37.037 0.00 0.00 0.00 3.58
518 519 4.027295 CACGTTGCTGCGAAAAATTTGTAA 60.027 37.500 7.42 0.00 35.59 2.41
540 542 1.547223 GGGAGTAGTAGATAGCCCGCA 60.547 57.143 0.00 0.00 0.00 5.69
543 545 3.074836 ACTGAGGGAGTAGTAGATAGCCC 59.925 52.174 0.00 0.00 30.86 5.19
546 548 9.629878 TTTAGAAACTGAGGGAGTAGTAGATAG 57.370 37.037 0.00 0.00 33.09 2.08
554 556 9.886132 GACAATTATTTAGAAACTGAGGGAGTA 57.114 33.333 0.00 0.00 33.09 2.59
555 557 8.606830 AGACAATTATTTAGAAACTGAGGGAGT 58.393 33.333 0.00 0.00 35.94 3.85
556 558 9.454859 AAGACAATTATTTAGAAACTGAGGGAG 57.545 33.333 0.00 0.00 0.00 4.30
557 559 9.807921 AAAGACAATTATTTAGAAACTGAGGGA 57.192 29.630 0.00 0.00 0.00 4.20
633 635 6.073222 ACGGAACAAAATGAGTGAATCTACAC 60.073 38.462 0.00 0.00 40.60 2.90
634 636 5.995282 ACGGAACAAAATGAGTGAATCTACA 59.005 36.000 0.00 0.00 0.00 2.74
635 637 6.481954 ACGGAACAAAATGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
636 638 7.822334 ACATACGGAACAAAATGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
637 639 6.655003 ACATACGGAACAAAATGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
638 640 6.842163 ACATACGGAACAAAATGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
639 641 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
640 642 6.932400 AGTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
641 643 6.460781 AGTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
642 644 6.367695 TGAGTACATACGGAACAAAATGAGTG 59.632 38.462 0.00 0.00 0.00 3.51
643 645 6.460781 TGAGTACATACGGAACAAAATGAGT 58.539 36.000 0.00 0.00 0.00 3.41
644 646 6.961359 TGAGTACATACGGAACAAAATGAG 57.039 37.500 0.00 0.00 0.00 2.90
645 647 7.915293 ATTGAGTACATACGGAACAAAATGA 57.085 32.000 0.00 0.00 0.00 2.57
646 648 8.020819 ACAATTGAGTACATACGGAACAAAATG 58.979 33.333 13.59 0.00 0.00 2.32
647 649 8.020819 CACAATTGAGTACATACGGAACAAAAT 58.979 33.333 13.59 0.00 0.00 1.82
648 650 7.356540 CACAATTGAGTACATACGGAACAAAA 58.643 34.615 13.59 0.00 0.00 2.44
649 651 6.072948 CCACAATTGAGTACATACGGAACAAA 60.073 38.462 13.59 0.00 0.00 2.83
650 652 5.410132 CCACAATTGAGTACATACGGAACAA 59.590 40.000 13.59 0.00 0.00 2.83
651 653 4.932799 CCACAATTGAGTACATACGGAACA 59.067 41.667 13.59 0.00 0.00 3.18
652 654 5.172934 TCCACAATTGAGTACATACGGAAC 58.827 41.667 13.59 0.00 0.00 3.62
653 655 5.408880 TCCACAATTGAGTACATACGGAA 57.591 39.130 13.59 0.00 0.00 4.30
654 656 5.408880 TTCCACAATTGAGTACATACGGA 57.591 39.130 13.59 1.03 0.00 4.69
655 657 6.538742 AGATTTCCACAATTGAGTACATACGG 59.461 38.462 13.59 0.00 0.00 4.02
656 658 7.492669 AGAGATTTCCACAATTGAGTACATACG 59.507 37.037 13.59 0.00 0.00 3.06
657 659 8.723942 AGAGATTTCCACAATTGAGTACATAC 57.276 34.615 13.59 0.00 0.00 2.39
659 661 8.762645 TCTAGAGATTTCCACAATTGAGTACAT 58.237 33.333 13.59 0.00 0.00 2.29
660 662 8.134202 TCTAGAGATTTCCACAATTGAGTACA 57.866 34.615 13.59 0.00 0.00 2.90
661 663 9.436957 TTTCTAGAGATTTCCACAATTGAGTAC 57.563 33.333 13.59 0.00 0.00 2.73
662 664 9.658799 CTTTCTAGAGATTTCCACAATTGAGTA 57.341 33.333 13.59 0.00 0.00 2.59
663 665 8.378565 TCTTTCTAGAGATTTCCACAATTGAGT 58.621 33.333 13.59 0.00 0.00 3.41
664 666 8.663911 GTCTTTCTAGAGATTTCCACAATTGAG 58.336 37.037 13.59 3.79 0.00 3.02
665 667 8.156820 TGTCTTTCTAGAGATTTCCACAATTGA 58.843 33.333 13.59 0.00 0.00 2.57
666 668 8.327941 TGTCTTTCTAGAGATTTCCACAATTG 57.672 34.615 3.24 3.24 0.00 2.32
667 669 8.924511 TTGTCTTTCTAGAGATTTCCACAATT 57.075 30.769 0.00 0.00 0.00 2.32
668 670 8.924511 TTTGTCTTTCTAGAGATTTCCACAAT 57.075 30.769 0.00 0.00 0.00 2.71
669 671 8.924511 ATTTGTCTTTCTAGAGATTTCCACAA 57.075 30.769 0.00 0.00 0.00 3.33
683 685 9.467796 CTCCCTTTCCTAAATATTTGTCTTTCT 57.532 33.333 11.05 0.00 0.00 2.52
684 686 9.244292 ACTCCCTTTCCTAAATATTTGTCTTTC 57.756 33.333 11.05 0.00 0.00 2.62
686 688 9.907229 CTACTCCCTTTCCTAAATATTTGTCTT 57.093 33.333 11.05 0.00 0.00 3.01
687 689 9.059023 ACTACTCCCTTTCCTAAATATTTGTCT 57.941 33.333 11.05 0.00 0.00 3.41
688 690 9.682465 AACTACTCCCTTTCCTAAATATTTGTC 57.318 33.333 11.05 0.00 0.00 3.18
699 701 8.495260 CCTTCAATATAAACTACTCCCTTTCCT 58.505 37.037 0.00 0.00 0.00 3.36
700 702 7.228906 GCCTTCAATATAAACTACTCCCTTTCC 59.771 40.741 0.00 0.00 0.00 3.13
701 703 7.993758 AGCCTTCAATATAAACTACTCCCTTTC 59.006 37.037 0.00 0.00 0.00 2.62
702 704 7.775561 CAGCCTTCAATATAAACTACTCCCTTT 59.224 37.037 0.00 0.00 0.00 3.11
703 705 7.127339 TCAGCCTTCAATATAAACTACTCCCTT 59.873 37.037 0.00 0.00 0.00 3.95
704 706 6.615726 TCAGCCTTCAATATAAACTACTCCCT 59.384 38.462 0.00 0.00 0.00 4.20
705 707 6.706716 GTCAGCCTTCAATATAAACTACTCCC 59.293 42.308 0.00 0.00 0.00 4.30
706 708 7.224949 GTGTCAGCCTTCAATATAAACTACTCC 59.775 40.741 0.00 0.00 0.00 3.85
707 709 7.764443 TGTGTCAGCCTTCAATATAAACTACTC 59.236 37.037 0.00 0.00 0.00 2.59
708 710 7.620880 TGTGTCAGCCTTCAATATAAACTACT 58.379 34.615 0.00 0.00 0.00 2.57
709 711 7.843490 TGTGTCAGCCTTCAATATAAACTAC 57.157 36.000 0.00 0.00 0.00 2.73
721 723 1.804151 TGCGTATTTGTGTCAGCCTTC 59.196 47.619 0.00 0.00 0.00 3.46
911 928 0.460987 CTAGACGAGCAAAGCTGGGG 60.461 60.000 6.01 0.00 39.88 4.96
941 958 2.502295 TGTATGTGTTGCAGTGATGCA 58.498 42.857 0.00 0.00 43.81 3.96
942 959 3.058016 ACTTGTATGTGTTGCAGTGATGC 60.058 43.478 0.00 0.00 0.00 3.91
943 960 4.754372 ACTTGTATGTGTTGCAGTGATG 57.246 40.909 0.00 0.00 0.00 3.07
948 965 5.696270 TGTAGAGAACTTGTATGTGTTGCAG 59.304 40.000 0.00 0.00 0.00 4.41
955 972 3.838317 TGGGCTGTAGAGAACTTGTATGT 59.162 43.478 0.00 0.00 0.00 2.29
983 1000 1.290203 CATGAGCGCGGTATCAAAGT 58.710 50.000 12.41 0.00 0.00 2.66
1159 1176 0.253347 TCCTGCCCCTCTTTGGAGAT 60.253 55.000 0.00 0.00 41.86 2.75
1184 1201 1.690633 GCCTCCCTGATGACCCTGA 60.691 63.158 0.00 0.00 0.00 3.86
1206 1223 3.984732 GGGACCAGGGCCTTTGCT 61.985 66.667 12.69 0.00 37.74 3.91
1495 1530 0.615331 ACATGCACCTGGTACCTGAG 59.385 55.000 19.66 12.45 0.00 3.35
1506 1546 2.024414 GGGGTTTAGATCACATGCACC 58.976 52.381 0.00 0.00 0.00 5.01
1685 1727 3.731728 GCATCTCCCTGCCCCACA 61.732 66.667 0.00 0.00 36.10 4.17
1721 1763 3.450115 GGTAGGACGACGGCTGCT 61.450 66.667 0.00 0.00 0.00 4.24
1830 1872 1.227002 GATCTCTCGTGGCCCGAAC 60.227 63.158 15.68 0.00 46.75 3.95
2106 2154 1.076332 CCGACTTGGCCTTCTTTACG 58.924 55.000 3.32 0.79 0.00 3.18
2226 2274 2.342279 CTCTTGAACCCGGCGTGA 59.658 61.111 6.01 0.00 0.00 4.35
2448 2500 1.525941 CGTAGGTAGAGGCTAGAGGC 58.474 60.000 0.00 0.00 41.43 4.70
2485 2544 5.729262 CATCATATATACGACGACGGAGAG 58.271 45.833 12.58 0.00 44.46 3.20
2490 2549 6.419771 ACATAGCATCATATATACGACGACG 58.580 40.000 5.58 5.58 45.75 5.12
2526 2588 0.036875 AGGGAACACTTGTAGCAGGC 59.963 55.000 0.00 0.00 0.00 4.85
2527 2589 1.339151 GGAGGGAACACTTGTAGCAGG 60.339 57.143 0.00 0.00 0.00 4.85
2528 2590 1.339151 GGGAGGGAACACTTGTAGCAG 60.339 57.143 0.00 0.00 0.00 4.24
2529 2591 0.690762 GGGAGGGAACACTTGTAGCA 59.309 55.000 0.00 0.00 0.00 3.49
2530 2592 0.984995 AGGGAGGGAACACTTGTAGC 59.015 55.000 0.00 0.00 0.00 3.58
2531 2593 2.907042 AGAAGGGAGGGAACACTTGTAG 59.093 50.000 0.00 0.00 0.00 2.74
2532 2594 2.986050 AGAAGGGAGGGAACACTTGTA 58.014 47.619 0.00 0.00 0.00 2.41
2606 2681 3.507233 TGTACCGTACACTCCTTCGATTT 59.493 43.478 7.32 0.00 32.89 2.17
2608 2683 2.681848 CTGTACCGTACACTCCTTCGAT 59.318 50.000 7.32 0.00 34.46 3.59
2609 2684 2.079158 CTGTACCGTACACTCCTTCGA 58.921 52.381 7.32 0.00 34.46 3.71
2610 2685 1.808945 ACTGTACCGTACACTCCTTCG 59.191 52.381 7.32 0.00 34.46 3.79
2615 2694 6.128172 ACACATACTTACTGTACCGTACACTC 60.128 42.308 7.32 0.00 34.46 3.51
2677 2756 7.771361 TCAAAATAAGTGACTCAACCTTGTACA 59.229 33.333 0.00 0.00 0.00 2.90
2684 2763 6.592607 TCCGTATCAAAATAAGTGACTCAACC 59.407 38.462 0.00 0.00 0.00 3.77
2706 2785 4.633126 TCGTCGAATATATTACTCCCTCCG 59.367 45.833 0.00 0.00 0.00 4.63
2736 2815 9.961264 TTACAACCTTGGTTGTGACAATATATA 57.039 29.630 35.04 17.00 45.83 0.86
2813 2892 6.305693 ACAGTAATCAAGTTTTGCTCTCAC 57.694 37.500 0.00 0.00 0.00 3.51
2833 2912 6.144080 CGTCAAAGTTAAGAGAGGTGTAACAG 59.856 42.308 0.00 0.00 39.98 3.16
2835 2914 5.404667 CCGTCAAAGTTAAGAGAGGTGTAAC 59.595 44.000 0.00 0.00 0.00 2.50
2846 2926 6.796705 AGTTGGTTATCCGTCAAAGTTAAG 57.203 37.500 0.00 0.00 36.30 1.85
2984 3064 4.438148 TGAGACAGTTTTCGATTGACACA 58.562 39.130 0.00 0.00 0.00 3.72
3012 3092 0.820871 AGACTGCATCTCCTCGTTCC 59.179 55.000 0.00 0.00 28.16 3.62
3015 3095 1.748493 GAGAAGACTGCATCTCCTCGT 59.252 52.381 4.02 0.00 36.27 4.18
3017 3097 3.290710 AGAGAGAAGACTGCATCTCCTC 58.709 50.000 10.71 7.61 42.45 3.71
3027 3107 5.461032 AAAACATGACGAGAGAGAAGACT 57.539 39.130 0.00 0.00 0.00 3.24
3050 3130 4.097135 CACGAGTATCAAGATCTCACTGGT 59.903 45.833 0.00 2.46 33.17 4.00
3082 3162 4.594854 ATGGTTGCCGCCACACCA 62.595 61.111 8.26 8.26 41.94 4.17
3126 3206 1.328430 CCAAGACGGAGGTAGACCCC 61.328 65.000 0.00 0.00 36.56 4.95
3166 3246 0.389296 CATAGTCGTCACGCCACCAA 60.389 55.000 0.00 0.00 0.00 3.67
3175 3255 1.621317 TGGAAGCAACCATAGTCGTCA 59.379 47.619 0.00 0.00 34.77 4.35
3194 3274 3.726607 GCCATCATAGAAGAGAGTGGTG 58.273 50.000 0.00 0.00 0.00 4.17
3209 3289 1.768275 ACCCATCTGATTACGCCATCA 59.232 47.619 0.00 0.00 0.00 3.07
3220 3300 4.199310 GCTGCAATTAGTAACCCATCTGA 58.801 43.478 0.00 0.00 0.00 3.27
3236 3316 1.522668 ACAGAACTTATGCGCTGCAA 58.477 45.000 9.73 0.00 43.62 4.08
3249 3329 8.734030 GCGTTTATTATGCTAATGAAACAGAAC 58.266 33.333 0.00 0.00 35.80 3.01
3352 6710 7.400052 AGGGAATATGCCAGTTTGTTTCTAAAT 59.600 33.333 0.98 0.00 0.00 1.40
3353 6711 6.723977 AGGGAATATGCCAGTTTGTTTCTAAA 59.276 34.615 0.98 0.00 0.00 1.85
3366 6724 4.202202 CGGCAATAAAAAGGGAATATGCCA 60.202 41.667 13.21 0.00 38.50 4.92
3368 6726 4.202212 ACCGGCAATAAAAAGGGAATATGC 60.202 41.667 0.00 0.00 0.00 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.