Multiple sequence alignment - TraesCS1B01G030500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G030500 chr1B 100.000 4400 0 0 1 4400 15101094 15096695 0.000000e+00 8126.0
1 TraesCS1B01G030500 chr1A 94.412 3633 111 34 1 3573 11822908 11819308 0.000000e+00 5500.0
2 TraesCS1B01G030500 chr1A 86.765 68 6 2 2320 2386 446144916 446144981 6.100000e-09 73.1
3 TraesCS1B01G030500 chr4B 93.923 2666 72 36 959 3573 57260020 57262646 0.000000e+00 3943.0
4 TraesCS1B01G030500 chr4B 95.223 963 33 5 1 957 57258941 57259896 0.000000e+00 1511.0
5 TraesCS1B01G030500 chr4B 100.000 50 0 0 959 1008 57259944 57259895 4.690000e-15 93.5
6 TraesCS1B01G030500 chr1D 94.045 2418 100 19 1 2389 10183606 10181204 0.000000e+00 3627.0
7 TraesCS1B01G030500 chr1D 93.640 1195 48 14 2389 3573 10181173 10179997 0.000000e+00 1760.0
8 TraesCS1B01G030500 chr2D 80.989 647 96 19 1658 2299 367232264 367232888 5.110000e-134 488.0
9 TraesCS1B01G030500 chr2A 80.863 533 82 15 1615 2142 497445433 497445950 6.850000e-108 401.0
10 TraesCS1B01G030500 chr3D 82.008 239 38 5 1616 1852 362727937 362727702 9.650000e-47 198.0
11 TraesCS1B01G030500 chr3D 81.893 243 34 9 1615 1853 594868996 594868760 3.470000e-46 196.0
12 TraesCS1B01G030500 chr3A 80.753 239 41 5 1616 1852 483152100 483151865 9.720000e-42 182.0
13 TraesCS1B01G030500 chr3A 93.651 63 4 0 4334 4396 20304398 20304336 1.300000e-15 95.3
14 TraesCS1B01G030500 chr4D 81.735 219 37 3 1615 1833 508989384 508989599 3.500000e-41 180.0
15 TraesCS1B01G030500 chr7D 93.651 63 4 0 4334 4396 394952682 394952620 1.300000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G030500 chr1B 15096695 15101094 4399 True 8126.0 8126 100.0000 1 4400 1 chr1B.!!$R1 4399
1 TraesCS1B01G030500 chr1A 11819308 11822908 3600 True 5500.0 5500 94.4120 1 3573 1 chr1A.!!$R1 3572
2 TraesCS1B01G030500 chr4B 57258941 57262646 3705 False 2727.0 3943 94.5730 1 3573 2 chr4B.!!$F1 3572
3 TraesCS1B01G030500 chr1D 10179997 10183606 3609 True 2693.5 3627 93.8425 1 3573 2 chr1D.!!$R1 3572
4 TraesCS1B01G030500 chr2D 367232264 367232888 624 False 488.0 488 80.9890 1658 2299 1 chr2D.!!$F1 641
5 TraesCS1B01G030500 chr2A 497445433 497445950 517 False 401.0 401 80.8630 1615 2142 1 chr2A.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 372 0.178953 ATGGCAGGCAGACAGGTTTT 60.179 50.0 1.89 0.0 39.86 2.43 F
652 662 0.251916 TGGCTATGAGTTCCCAACGG 59.748 55.0 0.00 0.0 36.23 4.44 F
944 955 0.397941 CAGAACTGGCACTCAAGGGA 59.602 55.0 0.00 0.0 0.00 4.20 F
2105 2245 0.689623 AACAAGGGAGCAGAGTGGAG 59.310 55.0 0.00 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1463 1597 0.034756 CCGTGTTGATGGTCACTGGA 59.965 55.0 0.00 0.00 33.57 3.86 R
2101 2241 0.178932 AGTCTAGTGTGTGCCCTCCA 60.179 55.0 0.00 0.00 0.00 3.86 R
2316 2479 0.447406 TTGCACATGTAGCATGTCGC 59.553 50.0 19.11 19.57 42.33 5.19 R
3765 3975 0.036858 GGTTCTCTCCTCAGTGGTGC 60.037 60.0 0.00 0.00 37.07 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 86 7.338196 TCTGTCCAGTCAGTTTAAATGTTTCAA 59.662 33.333 0.00 0.00 36.85 2.69
133 137 2.235016 TGTTCATTAGTGGGGTTGCAC 58.765 47.619 0.00 0.00 0.00 4.57
183 191 6.299141 AGTCCACATAGTGATCAGTTTTTGT 58.701 36.000 8.68 7.84 35.23 2.83
210 218 8.730680 GCTTCTTCATTAGACATTTCCAAGTTA 58.269 33.333 0.00 0.00 30.90 2.24
364 372 0.178953 ATGGCAGGCAGACAGGTTTT 60.179 50.000 1.89 0.00 39.86 2.43
410 418 4.321230 GGGTGCTTTTCGAATTCAGTTCAT 60.321 41.667 6.22 0.00 36.60 2.57
425 433 4.104776 CAGTTCATTTGTTTCACTTGCGT 58.895 39.130 0.00 0.00 0.00 5.24
501 510 5.171339 AGTGCATACATTTCTCAGACCTT 57.829 39.130 0.00 0.00 0.00 3.50
627 637 1.394917 CCGAGTTGCGAAGGATTTCAG 59.605 52.381 0.00 0.00 44.57 3.02
652 662 0.251916 TGGCTATGAGTTCCCAACGG 59.748 55.000 0.00 0.00 36.23 4.44
737 747 0.606401 GCCACTGCTGCTAAGGACAA 60.606 55.000 0.00 0.00 33.53 3.18
836 846 1.429463 GATGATTCCGGTGATACGCC 58.571 55.000 0.00 0.00 0.00 5.68
898 908 5.291858 CACTCTCATTTACGTGTATGCATGT 59.708 40.000 10.16 13.41 45.81 3.21
900 910 6.036083 ACTCTCATTTACGTGTATGCATGTTC 59.964 38.462 14.10 0.33 41.71 3.18
936 947 7.792374 TGAAGAATATTATCAGAACTGGCAC 57.208 36.000 1.93 0.00 0.00 5.01
944 955 0.397941 CAGAACTGGCACTCAAGGGA 59.602 55.000 0.00 0.00 0.00 4.20
1227 1360 7.688167 CACTTTATTTGCAGACACGTACTTATG 59.312 37.037 0.00 0.00 0.00 1.90
1386 1520 3.118629 CCAAGCTATAGGCAGTTCAGTCA 60.119 47.826 1.04 0.00 44.79 3.41
1463 1597 1.285280 TCAATCCACCCCGAACTGAT 58.715 50.000 0.00 0.00 0.00 2.90
1499 1633 4.314121 ACACGGTAATTACTTTTACGCCA 58.686 39.130 15.05 0.00 33.71 5.69
1500 1634 4.754114 ACACGGTAATTACTTTTACGCCAA 59.246 37.500 15.05 0.00 33.71 4.52
1502 1636 6.072563 ACACGGTAATTACTTTTACGCCAAAT 60.073 34.615 15.05 0.00 33.71 2.32
1551 1686 7.969536 ATGTGCATATAATGGTCTTCTGTAC 57.030 36.000 0.00 0.00 0.00 2.90
1555 1690 7.169982 GTGCATATAATGGTCTTCTGTACTGTC 59.830 40.741 0.00 0.00 0.00 3.51
1567 1703 3.005897 TCTGTACTGTCCAGTCAAGCTTC 59.994 47.826 2.65 0.00 42.54 3.86
1900 2039 1.332195 CTCTCCACCTATGCCGATGA 58.668 55.000 0.00 0.00 0.00 2.92
1907 2046 3.196469 CCACCTATGCCGATGACATCTAT 59.804 47.826 13.45 7.65 0.00 1.98
2012 2152 2.629017 ACATGGAAGCAAAGGGGATT 57.371 45.000 0.00 0.00 0.00 3.01
2101 2241 3.308473 GGGAAATAACAAGGGAGCAGAGT 60.308 47.826 0.00 0.00 0.00 3.24
2105 2245 0.689623 AACAAGGGAGCAGAGTGGAG 59.310 55.000 0.00 0.00 0.00 3.86
2354 2517 3.058914 GCAAGTCAAAGCTGATACAACGT 60.059 43.478 0.00 0.00 33.05 3.99
2366 2529 4.021229 TGATACAACGTGGATAGGACTGT 58.979 43.478 0.00 0.00 0.00 3.55
2392 2586 5.065474 GGTGACACACTTAGCAAACTTAACA 59.935 40.000 8.08 0.00 34.40 2.41
2568 2765 7.169813 TGTGAGCATATCTTACTTAGAAATGCG 59.830 37.037 0.00 0.00 36.22 4.73
2616 2813 2.167693 AGCCCTCAAATGTGAATGCATG 59.832 45.455 0.00 0.00 34.37 4.06
2763 2967 6.700081 TCAACTAACTTGGCTATATAGTTGCG 59.300 38.462 19.41 1.60 46.54 4.85
2773 2977 5.336055 GGCTATATAGTTGCGACATCTCTGT 60.336 44.000 11.38 0.00 38.67 3.41
2875 3079 3.126831 CTGCCTTTGATGAGTCCGATAC 58.873 50.000 0.00 0.00 0.00 2.24
2965 3169 0.390340 CACTCTGGTCGATGGGTGTG 60.390 60.000 7.57 5.51 0.00 3.82
3197 3401 0.389037 GAGCAGCGTGAGTGTGATCA 60.389 55.000 0.00 0.00 34.24 2.92
3258 3462 0.040958 CAGCTGTGCCGTTTGAAGAC 60.041 55.000 5.25 0.00 0.00 3.01
3443 3647 9.277783 GATAGGTAATGCAGAATGTCAACTAAT 57.722 33.333 0.00 0.00 39.31 1.73
3459 3663 4.755266 ACTAATCGCCACCTGTTAGATT 57.245 40.909 0.00 0.00 0.00 2.40
3462 3666 6.646267 ACTAATCGCCACCTGTTAGATTTTA 58.354 36.000 0.00 0.00 0.00 1.52
3463 3667 7.107542 ACTAATCGCCACCTGTTAGATTTTAA 58.892 34.615 0.00 0.00 0.00 1.52
3464 3668 7.773690 ACTAATCGCCACCTGTTAGATTTTAAT 59.226 33.333 0.00 0.00 0.00 1.40
3465 3669 7.404671 AATCGCCACCTGTTAGATTTTAATT 57.595 32.000 0.00 0.00 0.00 1.40
3466 3670 6.431198 TCGCCACCTGTTAGATTTTAATTC 57.569 37.500 0.00 0.00 0.00 2.17
3532 3736 1.459592 GCGACACACATCCACTTGTAC 59.540 52.381 0.00 0.00 0.00 2.90
3534 3738 2.066262 GACACACATCCACTTGTACGG 58.934 52.381 0.00 0.00 0.00 4.02
3573 3783 2.009042 GCCTTTGCGCAGTGAGAGTAT 61.009 52.381 11.31 0.00 0.00 2.12
3574 3784 2.350522 CCTTTGCGCAGTGAGAGTATT 58.649 47.619 11.31 0.00 0.00 1.89
3575 3785 3.521560 CCTTTGCGCAGTGAGAGTATTA 58.478 45.455 11.31 0.00 0.00 0.98
3576 3786 4.122776 CCTTTGCGCAGTGAGAGTATTAT 58.877 43.478 11.31 0.00 0.00 1.28
3577 3787 4.572389 CCTTTGCGCAGTGAGAGTATTATT 59.428 41.667 11.31 0.00 0.00 1.40
3578 3788 5.065218 CCTTTGCGCAGTGAGAGTATTATTT 59.935 40.000 11.31 0.00 0.00 1.40
3579 3789 6.403636 CCTTTGCGCAGTGAGAGTATTATTTT 60.404 38.462 11.31 0.00 0.00 1.82
3580 3790 5.469373 TGCGCAGTGAGAGTATTATTTTG 57.531 39.130 5.66 0.00 0.00 2.44
3581 3791 4.332543 TGCGCAGTGAGAGTATTATTTTGG 59.667 41.667 5.66 0.00 0.00 3.28
3582 3792 4.570772 GCGCAGTGAGAGTATTATTTTGGA 59.429 41.667 0.30 0.00 0.00 3.53
3583 3793 5.064707 GCGCAGTGAGAGTATTATTTTGGAA 59.935 40.000 0.30 0.00 0.00 3.53
3584 3794 6.403200 GCGCAGTGAGAGTATTATTTTGGAAA 60.403 38.462 0.30 0.00 0.00 3.13
3585 3795 7.679638 GCGCAGTGAGAGTATTATTTTGGAAAT 60.680 37.037 0.30 0.00 0.00 2.17
3586 3796 8.184192 CGCAGTGAGAGTATTATTTTGGAAATT 58.816 33.333 0.00 0.00 0.00 1.82
3587 3797 9.508567 GCAGTGAGAGTATTATTTTGGAAATTC 57.491 33.333 0.00 0.00 0.00 2.17
3602 3812 7.979115 TTGGAAATTCAAACTTTTACTGACG 57.021 32.000 0.00 0.00 0.00 4.35
3603 3813 7.323049 TGGAAATTCAAACTTTTACTGACGA 57.677 32.000 0.00 0.00 0.00 4.20
3604 3814 7.763356 TGGAAATTCAAACTTTTACTGACGAA 58.237 30.769 0.00 0.00 0.00 3.85
3605 3815 8.244802 TGGAAATTCAAACTTTTACTGACGAAA 58.755 29.630 0.00 0.00 0.00 3.46
3606 3816 9.078753 GGAAATTCAAACTTTTACTGACGAAAA 57.921 29.630 0.00 0.00 0.00 2.29
3611 3821 8.401046 TCAAACTTTTACTGACGAAAAATTGG 57.599 30.769 0.00 0.00 30.83 3.16
3612 3822 7.489757 TCAAACTTTTACTGACGAAAAATTGGG 59.510 33.333 0.00 0.00 30.83 4.12
3613 3823 6.702716 ACTTTTACTGACGAAAAATTGGGA 57.297 33.333 0.00 0.00 0.00 4.37
3614 3824 6.735130 ACTTTTACTGACGAAAAATTGGGAG 58.265 36.000 0.00 0.00 0.00 4.30
3615 3825 6.320418 ACTTTTACTGACGAAAAATTGGGAGT 59.680 34.615 0.00 0.00 0.00 3.85
3616 3826 6.702716 TTTACTGACGAAAAATTGGGAGTT 57.297 33.333 0.00 0.00 0.00 3.01
3617 3827 6.702716 TTACTGACGAAAAATTGGGAGTTT 57.297 33.333 0.00 0.00 0.00 2.66
3618 3828 4.932146 ACTGACGAAAAATTGGGAGTTTG 58.068 39.130 0.00 0.00 0.00 2.93
3619 3829 4.642885 ACTGACGAAAAATTGGGAGTTTGA 59.357 37.500 0.00 0.00 0.00 2.69
3620 3830 5.301805 ACTGACGAAAAATTGGGAGTTTGAT 59.698 36.000 0.00 0.00 0.00 2.57
3621 3831 6.155475 TGACGAAAAATTGGGAGTTTGATT 57.845 33.333 0.00 0.00 0.00 2.57
3622 3832 6.578023 TGACGAAAAATTGGGAGTTTGATTT 58.422 32.000 0.00 0.00 0.00 2.17
3623 3833 7.044798 TGACGAAAAATTGGGAGTTTGATTTT 58.955 30.769 0.00 0.00 34.24 1.82
3624 3834 8.198109 TGACGAAAAATTGGGAGTTTGATTTTA 58.802 29.630 0.00 0.00 32.94 1.52
3625 3835 9.203421 GACGAAAAATTGGGAGTTTGATTTTAT 57.797 29.630 0.00 0.00 32.94 1.40
3626 3836 9.554395 ACGAAAAATTGGGAGTTTGATTTTATT 57.446 25.926 0.00 0.00 32.94 1.40
3675 3885 8.818141 ACTTTCCTAAAGCTAAAATTTTCAGC 57.182 30.769 6.72 13.84 42.27 4.26
3734 3944 7.595819 TTTTTGGAGCTTCATAAAAGGAGAA 57.404 32.000 8.05 0.00 0.00 2.87
3735 3945 6.824305 TTTGGAGCTTCATAAAAGGAGAAG 57.176 37.500 0.00 0.00 41.20 2.85
3736 3946 5.762179 TGGAGCTTCATAAAAGGAGAAGA 57.238 39.130 0.00 0.00 40.85 2.87
3737 3947 6.319048 TGGAGCTTCATAAAAGGAGAAGAT 57.681 37.500 0.00 0.00 40.85 2.40
3738 3948 7.437713 TGGAGCTTCATAAAAGGAGAAGATA 57.562 36.000 0.00 0.00 40.85 1.98
3739 3949 7.861629 TGGAGCTTCATAAAAGGAGAAGATAA 58.138 34.615 0.00 0.00 40.85 1.75
3740 3950 7.770897 TGGAGCTTCATAAAAGGAGAAGATAAC 59.229 37.037 0.00 0.00 40.85 1.89
3741 3951 7.227711 GGAGCTTCATAAAAGGAGAAGATAACC 59.772 40.741 5.66 0.00 40.85 2.85
3742 3952 7.057264 AGCTTCATAAAAGGAGAAGATAACCC 58.943 38.462 5.66 0.00 40.85 4.11
3743 3953 7.057264 GCTTCATAAAAGGAGAAGATAACCCT 58.943 38.462 5.66 0.00 40.85 4.34
3744 3954 7.012799 GCTTCATAAAAGGAGAAGATAACCCTG 59.987 40.741 5.66 0.00 40.85 4.45
3745 3955 7.749377 TCATAAAAGGAGAAGATAACCCTGA 57.251 36.000 0.00 0.00 0.00 3.86
3746 3956 8.158025 TCATAAAAGGAGAAGATAACCCTGAA 57.842 34.615 0.00 0.00 0.00 3.02
3747 3957 8.611257 TCATAAAAGGAGAAGATAACCCTGAAA 58.389 33.333 0.00 0.00 0.00 2.69
3748 3958 9.243105 CATAAAAGGAGAAGATAACCCTGAAAA 57.757 33.333 0.00 0.00 0.00 2.29
3749 3959 9.822727 ATAAAAGGAGAAGATAACCCTGAAAAA 57.177 29.630 0.00 0.00 0.00 1.94
3766 3976 3.658351 AAAAATGATACACGAGCGAGC 57.342 42.857 0.00 0.00 0.00 5.03
3767 3977 2.293677 AAATGATACACGAGCGAGCA 57.706 45.000 0.00 0.00 0.00 4.26
3768 3978 1.560923 AATGATACACGAGCGAGCAC 58.439 50.000 0.00 0.00 0.00 4.40
3769 3979 0.249073 ATGATACACGAGCGAGCACC 60.249 55.000 0.00 0.00 0.00 5.01
3770 3980 1.138883 GATACACGAGCGAGCACCA 59.861 57.895 0.00 0.00 0.00 4.17
3771 3981 1.140407 GATACACGAGCGAGCACCAC 61.140 60.000 0.00 0.00 0.00 4.16
3772 3982 1.595993 ATACACGAGCGAGCACCACT 61.596 55.000 0.00 0.00 0.00 4.00
3773 3983 2.472232 TACACGAGCGAGCACCACTG 62.472 60.000 0.00 0.00 0.00 3.66
3774 3984 3.295273 ACGAGCGAGCACCACTGA 61.295 61.111 0.00 0.00 0.00 3.41
3775 3985 2.505777 CGAGCGAGCACCACTGAG 60.506 66.667 0.00 0.00 0.00 3.35
3776 3986 2.125753 GAGCGAGCACCACTGAGG 60.126 66.667 0.00 0.00 45.67 3.86
3777 3987 2.601666 AGCGAGCACCACTGAGGA 60.602 61.111 0.00 0.00 41.22 3.71
3778 3988 2.125753 GCGAGCACCACTGAGGAG 60.126 66.667 0.00 0.00 41.22 3.69
3779 3989 2.640302 GCGAGCACCACTGAGGAGA 61.640 63.158 0.00 0.00 41.22 3.71
3780 3990 1.510383 CGAGCACCACTGAGGAGAG 59.490 63.158 0.00 0.00 41.22 3.20
3781 3991 0.962855 CGAGCACCACTGAGGAGAGA 60.963 60.000 0.00 0.00 41.22 3.10
3782 3992 1.261480 GAGCACCACTGAGGAGAGAA 58.739 55.000 0.00 0.00 41.22 2.87
3783 3993 0.972883 AGCACCACTGAGGAGAGAAC 59.027 55.000 0.00 0.00 41.22 3.01
3784 3994 0.036858 GCACCACTGAGGAGAGAACC 60.037 60.000 0.00 0.00 41.22 3.62
3785 3995 1.342074 CACCACTGAGGAGAGAACCA 58.658 55.000 0.00 0.00 41.22 3.67
3786 3996 1.001406 CACCACTGAGGAGAGAACCAC 59.999 57.143 0.00 0.00 41.22 4.16
3787 3997 1.342074 CCACTGAGGAGAGAACCACA 58.658 55.000 0.00 0.00 41.22 4.17
3788 3998 1.694150 CCACTGAGGAGAGAACCACAA 59.306 52.381 0.00 0.00 41.22 3.33
3789 3999 2.548920 CCACTGAGGAGAGAACCACAAC 60.549 54.545 0.00 0.00 41.22 3.32
3790 4000 2.103094 CACTGAGGAGAGAACCACAACA 59.897 50.000 0.00 0.00 30.95 3.33
3791 4001 2.771943 ACTGAGGAGAGAACCACAACAA 59.228 45.455 0.00 0.00 30.95 2.83
3792 4002 3.134458 CTGAGGAGAGAACCACAACAAC 58.866 50.000 0.00 0.00 30.95 3.32
3793 4003 2.135933 GAGGAGAGAACCACAACAACG 58.864 52.381 0.00 0.00 0.00 4.10
3794 4004 1.485066 AGGAGAGAACCACAACAACGT 59.515 47.619 0.00 0.00 0.00 3.99
3795 4005 1.865340 GGAGAGAACCACAACAACGTC 59.135 52.381 0.00 0.00 0.00 4.34
3796 4006 2.483188 GGAGAGAACCACAACAACGTCT 60.483 50.000 0.00 0.00 0.00 4.18
3797 4007 3.243636 GGAGAGAACCACAACAACGTCTA 60.244 47.826 0.00 0.00 0.00 2.59
3798 4008 4.365723 GAGAGAACCACAACAACGTCTAA 58.634 43.478 0.00 0.00 0.00 2.10
3799 4009 4.117685 AGAGAACCACAACAACGTCTAAC 58.882 43.478 0.00 0.00 0.00 2.34
3800 4010 4.117685 GAGAACCACAACAACGTCTAACT 58.882 43.478 0.00 0.00 0.00 2.24
3801 4011 3.869246 AGAACCACAACAACGTCTAACTG 59.131 43.478 0.00 0.00 0.00 3.16
3802 4012 3.255969 ACCACAACAACGTCTAACTGT 57.744 42.857 0.00 0.00 0.00 3.55
3803 4013 3.602483 ACCACAACAACGTCTAACTGTT 58.398 40.909 0.00 0.00 33.62 3.16
3810 4020 2.150397 ACGTCTAACTGTTGTGGAGC 57.850 50.000 2.69 0.00 0.00 4.70
3811 4021 1.060713 CGTCTAACTGTTGTGGAGCG 58.939 55.000 2.69 0.00 0.00 5.03
3812 4022 1.429463 GTCTAACTGTTGTGGAGCGG 58.571 55.000 2.69 0.00 0.00 5.52
3813 4023 1.045407 TCTAACTGTTGTGGAGCGGT 58.955 50.000 2.69 0.00 0.00 5.68
3814 4024 1.414919 TCTAACTGTTGTGGAGCGGTT 59.585 47.619 2.69 0.00 37.82 4.44
3815 4025 2.158871 TCTAACTGTTGTGGAGCGGTTT 60.159 45.455 2.69 0.00 35.93 3.27
3816 4026 1.021968 AACTGTTGTGGAGCGGTTTC 58.978 50.000 0.00 0.00 30.81 2.78
3817 4027 0.107410 ACTGTTGTGGAGCGGTTTCA 60.107 50.000 0.00 0.00 0.00 2.69
3818 4028 1.238439 CTGTTGTGGAGCGGTTTCAT 58.762 50.000 0.00 0.00 0.00 2.57
3819 4029 1.608590 CTGTTGTGGAGCGGTTTCATT 59.391 47.619 0.00 0.00 0.00 2.57
3820 4030 1.606668 TGTTGTGGAGCGGTTTCATTC 59.393 47.619 0.00 0.00 0.00 2.67
3821 4031 1.606668 GTTGTGGAGCGGTTTCATTCA 59.393 47.619 0.00 0.00 0.00 2.57
3822 4032 1.522668 TGTGGAGCGGTTTCATTCAG 58.477 50.000 0.00 0.00 0.00 3.02
3823 4033 0.804989 GTGGAGCGGTTTCATTCAGG 59.195 55.000 0.00 0.00 0.00 3.86
3824 4034 0.400213 TGGAGCGGTTTCATTCAGGT 59.600 50.000 0.00 0.00 0.00 4.00
3825 4035 1.202879 TGGAGCGGTTTCATTCAGGTT 60.203 47.619 0.00 0.00 0.00 3.50
3826 4036 1.886542 GGAGCGGTTTCATTCAGGTTT 59.113 47.619 0.00 0.00 0.00 3.27
3827 4037 2.296190 GGAGCGGTTTCATTCAGGTTTT 59.704 45.455 0.00 0.00 0.00 2.43
3828 4038 3.243737 GGAGCGGTTTCATTCAGGTTTTT 60.244 43.478 0.00 0.00 0.00 1.94
3848 4058 3.343941 TTGAATTAGGAGGGTTGACCG 57.656 47.619 0.00 0.00 46.96 4.79
3849 4059 2.542550 TGAATTAGGAGGGTTGACCGA 58.457 47.619 0.00 0.00 46.96 4.69
3850 4060 2.500098 TGAATTAGGAGGGTTGACCGAG 59.500 50.000 0.00 0.00 46.96 4.63
3851 4061 2.544844 ATTAGGAGGGTTGACCGAGA 57.455 50.000 0.00 0.00 46.96 4.04
3852 4062 2.544844 TTAGGAGGGTTGACCGAGAT 57.455 50.000 0.00 0.00 46.96 2.75
3853 4063 2.068834 TAGGAGGGTTGACCGAGATC 57.931 55.000 0.00 0.00 46.96 2.75
3854 4064 0.041238 AGGAGGGTTGACCGAGATCA 59.959 55.000 0.00 0.00 46.96 2.92
3855 4065 0.902531 GGAGGGTTGACCGAGATCAA 59.097 55.000 0.00 0.00 46.96 2.57
3856 4066 1.486726 GGAGGGTTGACCGAGATCAAT 59.513 52.381 0.00 0.00 46.96 2.57
3857 4067 2.092914 GGAGGGTTGACCGAGATCAATT 60.093 50.000 0.00 0.00 46.96 2.32
3858 4068 3.610911 GAGGGTTGACCGAGATCAATTT 58.389 45.455 0.00 0.00 46.96 1.82
3859 4069 3.347216 AGGGTTGACCGAGATCAATTTG 58.653 45.455 0.00 0.00 46.96 2.32
3860 4070 3.009033 AGGGTTGACCGAGATCAATTTGA 59.991 43.478 0.75 0.75 46.96 2.69
3861 4071 3.756434 GGGTTGACCGAGATCAATTTGAA 59.244 43.478 2.68 0.00 40.60 2.69
3862 4072 4.217550 GGGTTGACCGAGATCAATTTGAAA 59.782 41.667 2.68 0.00 40.60 2.69
3863 4073 5.154222 GGTTGACCGAGATCAATTTGAAAC 58.846 41.667 2.68 1.06 40.60 2.78
3864 4074 5.154222 GTTGACCGAGATCAATTTGAAACC 58.846 41.667 2.68 0.00 40.60 3.27
3865 4075 4.393834 TGACCGAGATCAATTTGAAACCA 58.606 39.130 2.68 0.00 0.00 3.67
3866 4076 4.824537 TGACCGAGATCAATTTGAAACCAA 59.175 37.500 2.68 0.00 0.00 3.67
3867 4077 5.300539 TGACCGAGATCAATTTGAAACCAAA 59.699 36.000 2.68 0.00 37.85 3.28
3868 4078 6.155475 ACCGAGATCAATTTGAAACCAAAA 57.845 33.333 2.68 0.00 37.12 2.44
3869 4079 6.215845 ACCGAGATCAATTTGAAACCAAAAG 58.784 36.000 2.68 0.00 37.12 2.27
3870 4080 5.634859 CCGAGATCAATTTGAAACCAAAAGG 59.365 40.000 2.68 0.00 37.12 3.11
3871 4081 5.634859 CGAGATCAATTTGAAACCAAAAGGG 59.365 40.000 2.68 0.00 44.81 3.95
3872 4082 6.516527 CGAGATCAATTTGAAACCAAAAGGGA 60.517 38.462 2.68 0.00 41.15 4.20
3873 4083 7.135591 AGATCAATTTGAAACCAAAAGGGAA 57.864 32.000 2.68 0.00 41.15 3.97
3874 4084 7.572814 AGATCAATTTGAAACCAAAAGGGAAA 58.427 30.769 2.68 0.00 41.15 3.13
3875 4085 8.052141 AGATCAATTTGAAACCAAAAGGGAAAA 58.948 29.630 2.68 0.00 41.15 2.29
3876 4086 8.586879 ATCAATTTGAAACCAAAAGGGAAAAA 57.413 26.923 2.68 0.00 41.15 1.94
3877 4087 8.049655 TCAATTTGAAACCAAAAGGGAAAAAG 57.950 30.769 0.00 0.00 41.15 2.27
3878 4088 7.885399 TCAATTTGAAACCAAAAGGGAAAAAGA 59.115 29.630 0.00 0.00 41.15 2.52
3879 4089 8.518702 CAATTTGAAACCAAAAGGGAAAAAGAA 58.481 29.630 0.00 0.00 41.15 2.52
3880 4090 8.642935 ATTTGAAACCAAAAGGGAAAAAGAAA 57.357 26.923 0.00 0.00 41.15 2.52
3881 4091 8.465273 TTTGAAACCAAAAGGGAAAAAGAAAA 57.535 26.923 0.00 0.00 41.15 2.29
3882 4092 8.465273 TTGAAACCAAAAGGGAAAAAGAAAAA 57.535 26.923 0.00 0.00 41.15 1.94
3883 4093 8.105097 TGAAACCAAAAGGGAAAAAGAAAAAG 57.895 30.769 0.00 0.00 41.15 2.27
3884 4094 7.939588 TGAAACCAAAAGGGAAAAAGAAAAAGA 59.060 29.630 0.00 0.00 41.15 2.52
3885 4095 8.698973 AAACCAAAAGGGAAAAAGAAAAAGAA 57.301 26.923 0.00 0.00 41.15 2.52
3886 4096 7.921786 ACCAAAAGGGAAAAAGAAAAAGAAG 57.078 32.000 0.00 0.00 41.15 2.85
3887 4097 7.685481 ACCAAAAGGGAAAAAGAAAAAGAAGA 58.315 30.769 0.00 0.00 41.15 2.87
3888 4098 8.160765 ACCAAAAGGGAAAAAGAAAAAGAAGAA 58.839 29.630 0.00 0.00 41.15 2.52
3889 4099 9.177608 CCAAAAGGGAAAAAGAAAAAGAAGAAT 57.822 29.630 0.00 0.00 40.01 2.40
3890 4100 9.992910 CAAAAGGGAAAAAGAAAAAGAAGAATG 57.007 29.630 0.00 0.00 0.00 2.67
3891 4101 9.958180 AAAAGGGAAAAAGAAAAAGAAGAATGA 57.042 25.926 0.00 0.00 0.00 2.57
3892 4102 9.958180 AAAGGGAAAAAGAAAAAGAAGAATGAA 57.042 25.926 0.00 0.00 0.00 2.57
3893 4103 9.958180 AAGGGAAAAAGAAAAAGAAGAATGAAA 57.042 25.926 0.00 0.00 0.00 2.69
3939 4149 9.482627 AAGAAACCGAATAAATAATGCAAAACA 57.517 25.926 0.00 0.00 0.00 2.83
3940 4150 9.139174 AGAAACCGAATAAATAATGCAAAACAG 57.861 29.630 0.00 0.00 0.00 3.16
3941 4151 8.825667 AAACCGAATAAATAATGCAAAACAGT 57.174 26.923 0.00 0.00 0.00 3.55
3942 4152 7.810766 ACCGAATAAATAATGCAAAACAGTG 57.189 32.000 0.00 0.00 0.00 3.66
3943 4153 7.598278 ACCGAATAAATAATGCAAAACAGTGA 58.402 30.769 0.00 0.00 0.00 3.41
3944 4154 8.085296 ACCGAATAAATAATGCAAAACAGTGAA 58.915 29.630 0.00 0.00 0.00 3.18
3945 4155 8.920665 CCGAATAAATAATGCAAAACAGTGAAA 58.079 29.630 0.00 0.00 0.00 2.69
3946 4156 9.726034 CGAATAAATAATGCAAAACAGTGAAAC 57.274 29.630 0.00 0.00 0.00 2.78
3948 4158 9.777297 AATAAATAATGCAAAACAGTGAAACCT 57.223 25.926 0.00 0.00 37.80 3.50
3954 4164 8.816640 AATGCAAAACAGTGAAACCTATAAAG 57.183 30.769 0.00 0.00 37.80 1.85
3955 4165 7.575414 TGCAAAACAGTGAAACCTATAAAGA 57.425 32.000 0.00 0.00 37.80 2.52
3956 4166 8.001881 TGCAAAACAGTGAAACCTATAAAGAA 57.998 30.769 0.00 0.00 37.80 2.52
3957 4167 8.470805 TGCAAAACAGTGAAACCTATAAAGAAA 58.529 29.630 0.00 0.00 37.80 2.52
3958 4168 8.752254 GCAAAACAGTGAAACCTATAAAGAAAC 58.248 33.333 0.00 0.00 37.80 2.78
3959 4169 9.796120 CAAAACAGTGAAACCTATAAAGAAACA 57.204 29.630 0.00 0.00 37.80 2.83
3963 4173 8.630037 ACAGTGAAACCTATAAAGAAACAAAGG 58.370 33.333 0.00 0.00 37.80 3.11
3964 4174 8.846211 CAGTGAAACCTATAAAGAAACAAAGGA 58.154 33.333 0.00 0.00 37.80 3.36
3965 4175 9.416284 AGTGAAACCTATAAAGAAACAAAGGAA 57.584 29.630 0.00 0.00 37.80 3.36
3977 4187 9.936759 AAAGAAACAAAGGAAAATACTGTTGAA 57.063 25.926 0.00 0.00 30.90 2.69
3978 4188 9.936759 AAGAAACAAAGGAAAATACTGTTGAAA 57.063 25.926 0.00 0.00 30.90 2.69
3979 4189 9.936759 AGAAACAAAGGAAAATACTGTTGAAAA 57.063 25.926 0.00 0.00 30.90 2.29
3982 4192 9.495572 AACAAAGGAAAATACTGTTGAAAAACA 57.504 25.926 0.00 0.00 0.00 2.83
3983 4193 9.495572 ACAAAGGAAAATACTGTTGAAAAACAA 57.504 25.926 0.00 0.00 36.02 2.83
3984 4194 9.971744 CAAAGGAAAATACTGTTGAAAAACAAG 57.028 29.630 0.00 0.00 39.30 3.16
3985 4195 9.936759 AAAGGAAAATACTGTTGAAAAACAAGA 57.063 25.926 0.00 0.00 39.30 3.02
3986 4196 9.936759 AAGGAAAATACTGTTGAAAAACAAGAA 57.063 25.926 0.00 0.00 39.30 2.52
3987 4197 9.936759 AGGAAAATACTGTTGAAAAACAAGAAA 57.063 25.926 0.00 0.00 39.30 2.52
4050 4260 8.519799 AAGAAAAGAAAGACAGATGTAAACCA 57.480 30.769 0.00 0.00 0.00 3.67
4051 4261 8.697507 AGAAAAGAAAGACAGATGTAAACCAT 57.302 30.769 0.00 0.00 36.13 3.55
4052 4262 8.571336 AGAAAAGAAAGACAGATGTAAACCATG 58.429 33.333 0.00 0.00 32.56 3.66
4053 4263 8.463930 AAAAGAAAGACAGATGTAAACCATGA 57.536 30.769 0.00 0.00 32.56 3.07
4054 4264 8.463930 AAAGAAAGACAGATGTAAACCATGAA 57.536 30.769 0.00 0.00 32.56 2.57
4055 4265 8.463930 AAGAAAGACAGATGTAAACCATGAAA 57.536 30.769 0.00 0.00 32.56 2.69
4056 4266 8.641498 AGAAAGACAGATGTAAACCATGAAAT 57.359 30.769 0.00 0.00 32.56 2.17
4057 4267 9.739276 AGAAAGACAGATGTAAACCATGAAATA 57.261 29.630 0.00 0.00 32.56 1.40
4060 4270 7.989826 AGACAGATGTAAACCATGAAATAAGC 58.010 34.615 0.00 0.00 32.56 3.09
4061 4271 7.611467 AGACAGATGTAAACCATGAAATAAGCA 59.389 33.333 0.00 0.00 32.56 3.91
4062 4272 8.121305 ACAGATGTAAACCATGAAATAAGCAA 57.879 30.769 0.00 0.00 32.56 3.91
4063 4273 8.584157 ACAGATGTAAACCATGAAATAAGCAAA 58.416 29.630 0.00 0.00 32.56 3.68
4064 4274 9.421806 CAGATGTAAACCATGAAATAAGCAAAA 57.578 29.630 0.00 0.00 32.56 2.44
4065 4275 9.643693 AGATGTAAACCATGAAATAAGCAAAAG 57.356 29.630 0.00 0.00 32.56 2.27
4066 4276 9.638239 GATGTAAACCATGAAATAAGCAAAAGA 57.362 29.630 0.00 0.00 32.56 2.52
4067 4277 9.995003 ATGTAAACCATGAAATAAGCAAAAGAA 57.005 25.926 0.00 0.00 30.69 2.52
4068 4278 9.823647 TGTAAACCATGAAATAAGCAAAAGAAA 57.176 25.926 0.00 0.00 0.00 2.52
4072 4282 8.153479 ACCATGAAATAAGCAAAAGAAAAACC 57.847 30.769 0.00 0.00 0.00 3.27
4073 4283 7.772757 ACCATGAAATAAGCAAAAGAAAAACCA 59.227 29.630 0.00 0.00 0.00 3.67
4074 4284 8.619546 CCATGAAATAAGCAAAAGAAAAACCAA 58.380 29.630 0.00 0.00 0.00 3.67
4077 4287 9.442047 TGAAATAAGCAAAAGAAAAACCAAAGA 57.558 25.926 0.00 0.00 0.00 2.52
4082 4292 6.611381 AGCAAAAGAAAAACCAAAGAAAAGC 58.389 32.000 0.00 0.00 0.00 3.51
4083 4293 6.206438 AGCAAAAGAAAAACCAAAGAAAAGCA 59.794 30.769 0.00 0.00 0.00 3.91
4084 4294 6.305399 GCAAAAGAAAAACCAAAGAAAAGCAC 59.695 34.615 0.00 0.00 0.00 4.40
4085 4295 7.358830 CAAAAGAAAAACCAAAGAAAAGCACA 58.641 30.769 0.00 0.00 0.00 4.57
4086 4296 7.503521 AAAGAAAAACCAAAGAAAAGCACAA 57.496 28.000 0.00 0.00 0.00 3.33
4087 4297 6.726258 AGAAAAACCAAAGAAAAGCACAAG 57.274 33.333 0.00 0.00 0.00 3.16
4088 4298 5.643348 AGAAAAACCAAAGAAAAGCACAAGG 59.357 36.000 0.00 0.00 0.00 3.61
4089 4299 4.817318 AAACCAAAGAAAAGCACAAGGA 57.183 36.364 0.00 0.00 0.00 3.36
4090 4300 4.817318 AACCAAAGAAAAGCACAAGGAA 57.183 36.364 0.00 0.00 0.00 3.36
4091 4301 4.817318 ACCAAAGAAAAGCACAAGGAAA 57.183 36.364 0.00 0.00 0.00 3.13
4092 4302 4.503910 ACCAAAGAAAAGCACAAGGAAAC 58.496 39.130 0.00 0.00 0.00 2.78
4094 4304 5.420739 ACCAAAGAAAAGCACAAGGAAACTA 59.579 36.000 0.00 0.00 42.68 2.24
4095 4305 6.071051 ACCAAAGAAAAGCACAAGGAAACTAA 60.071 34.615 0.00 0.00 42.68 2.24
4096 4306 6.816140 CCAAAGAAAAGCACAAGGAAACTAAA 59.184 34.615 0.00 0.00 42.68 1.85
4097 4307 7.333174 CCAAAGAAAAGCACAAGGAAACTAAAA 59.667 33.333 0.00 0.00 42.68 1.52
4098 4308 8.716909 CAAAGAAAAGCACAAGGAAACTAAAAA 58.283 29.630 0.00 0.00 42.68 1.94
4099 4309 7.827819 AGAAAAGCACAAGGAAACTAAAAAC 57.172 32.000 0.00 0.00 42.68 2.43
4100 4310 6.816640 AGAAAAGCACAAGGAAACTAAAAACC 59.183 34.615 0.00 0.00 42.68 3.27
4101 4311 5.932619 AAGCACAAGGAAACTAAAAACCT 57.067 34.783 0.00 0.00 42.68 3.50
4102 4312 5.262588 AGCACAAGGAAACTAAAAACCTG 57.737 39.130 0.00 0.00 42.68 4.00
4103 4313 4.709886 AGCACAAGGAAACTAAAAACCTGT 59.290 37.500 0.00 0.00 42.68 4.00
4104 4314 5.889289 AGCACAAGGAAACTAAAAACCTGTA 59.111 36.000 0.00 0.00 42.68 2.74
4105 4315 5.975344 GCACAAGGAAACTAAAAACCTGTAC 59.025 40.000 0.00 0.00 42.68 2.90
4106 4316 6.183360 GCACAAGGAAACTAAAAACCTGTACT 60.183 38.462 0.00 0.00 42.68 2.73
4107 4317 7.012610 GCACAAGGAAACTAAAAACCTGTACTA 59.987 37.037 0.00 0.00 42.68 1.82
4108 4318 9.063615 CACAAGGAAACTAAAAACCTGTACTAT 57.936 33.333 0.00 0.00 42.68 2.12
4116 4326 9.933723 AACTAAAAACCTGTACTATAATGACGT 57.066 29.630 0.00 0.00 0.00 4.34
4120 4330 7.998753 AAACCTGTACTATAATGACGTAAGC 57.001 36.000 0.00 0.00 45.62 3.09
4121 4331 6.704289 ACCTGTACTATAATGACGTAAGCA 57.296 37.500 0.00 0.00 45.62 3.91
4122 4332 7.286215 ACCTGTACTATAATGACGTAAGCAT 57.714 36.000 0.00 0.00 45.62 3.79
4123 4333 8.400184 ACCTGTACTATAATGACGTAAGCATA 57.600 34.615 0.00 0.00 45.62 3.14
4124 4334 8.853126 ACCTGTACTATAATGACGTAAGCATAA 58.147 33.333 0.00 0.00 45.62 1.90
4125 4335 9.856488 CCTGTACTATAATGACGTAAGCATAAT 57.144 33.333 0.00 0.00 45.62 1.28
4165 4375 9.750125 AACTGAAGAAGAAATATGAAAACCAAC 57.250 29.630 0.00 0.00 0.00 3.77
4166 4376 8.912988 ACTGAAGAAGAAATATGAAAACCAACA 58.087 29.630 0.00 0.00 0.00 3.33
4167 4377 9.748708 CTGAAGAAGAAATATGAAAACCAACAA 57.251 29.630 0.00 0.00 0.00 2.83
4218 4428 5.590530 AAAAACCTGAATGTACACAGCAA 57.409 34.783 0.00 0.00 33.40 3.91
4219 4429 4.568152 AAACCTGAATGTACACAGCAAC 57.432 40.909 0.00 0.00 33.40 4.17
4220 4430 2.143122 ACCTGAATGTACACAGCAACG 58.857 47.619 0.00 0.00 33.40 4.10
4221 4431 2.224185 ACCTGAATGTACACAGCAACGA 60.224 45.455 0.00 0.00 33.40 3.85
4222 4432 2.805671 CCTGAATGTACACAGCAACGAA 59.194 45.455 0.00 0.00 33.40 3.85
4223 4433 3.120546 CCTGAATGTACACAGCAACGAAG 60.121 47.826 0.00 0.00 33.40 3.79
4224 4434 2.223144 TGAATGTACACAGCAACGAAGC 59.777 45.455 0.00 0.00 0.00 3.86
4225 4435 1.877637 ATGTACACAGCAACGAAGCA 58.122 45.000 0.00 0.00 36.85 3.91
4226 4436 0.934496 TGTACACAGCAACGAAGCAC 59.066 50.000 0.00 0.00 36.85 4.40
4227 4437 0.234884 GTACACAGCAACGAAGCACC 59.765 55.000 6.62 0.00 36.85 5.01
4228 4438 1.218875 TACACAGCAACGAAGCACCG 61.219 55.000 6.62 0.00 36.85 4.94
4229 4439 2.108157 ACAGCAACGAAGCACCGA 59.892 55.556 4.78 0.00 36.85 4.69
4230 4440 1.956170 ACAGCAACGAAGCACCGAG 60.956 57.895 4.78 0.00 36.85 4.63
4231 4441 2.357517 AGCAACGAAGCACCGAGG 60.358 61.111 4.78 0.00 36.85 4.63
4232 4442 2.357034 GCAACGAAGCACCGAGGA 60.357 61.111 4.78 0.00 0.00 3.71
4233 4443 1.959226 GCAACGAAGCACCGAGGAA 60.959 57.895 4.78 0.00 0.00 3.36
4234 4444 1.298859 GCAACGAAGCACCGAGGAAT 61.299 55.000 4.78 0.00 0.00 3.01
4235 4445 0.443869 CAACGAAGCACCGAGGAATG 59.556 55.000 4.78 0.00 0.00 2.67
4236 4446 0.320374 AACGAAGCACCGAGGAATGA 59.680 50.000 4.78 0.00 0.00 2.57
4237 4447 0.320374 ACGAAGCACCGAGGAATGAA 59.680 50.000 4.78 0.00 0.00 2.57
4238 4448 1.002366 CGAAGCACCGAGGAATGAAG 58.998 55.000 0.00 0.00 0.00 3.02
4239 4449 1.373570 GAAGCACCGAGGAATGAAGG 58.626 55.000 0.00 0.00 0.00 3.46
4240 4450 0.984230 AAGCACCGAGGAATGAAGGA 59.016 50.000 0.00 0.00 0.00 3.36
4241 4451 0.984230 AGCACCGAGGAATGAAGGAA 59.016 50.000 0.00 0.00 0.00 3.36
4242 4452 1.351017 AGCACCGAGGAATGAAGGAAA 59.649 47.619 0.00 0.00 0.00 3.13
4243 4453 1.468914 GCACCGAGGAATGAAGGAAAC 59.531 52.381 0.00 0.00 0.00 2.78
4244 4454 2.778299 CACCGAGGAATGAAGGAAACA 58.222 47.619 0.00 0.00 0.00 2.83
4245 4455 3.146066 CACCGAGGAATGAAGGAAACAA 58.854 45.455 0.00 0.00 0.00 2.83
4246 4456 3.189287 CACCGAGGAATGAAGGAAACAAG 59.811 47.826 0.00 0.00 0.00 3.16
4247 4457 3.181443 ACCGAGGAATGAAGGAAACAAGT 60.181 43.478 0.00 0.00 0.00 3.16
4248 4458 4.041198 ACCGAGGAATGAAGGAAACAAGTA 59.959 41.667 0.00 0.00 0.00 2.24
4249 4459 4.631813 CCGAGGAATGAAGGAAACAAGTAG 59.368 45.833 0.00 0.00 0.00 2.57
4250 4460 4.093556 CGAGGAATGAAGGAAACAAGTAGC 59.906 45.833 0.00 0.00 0.00 3.58
4251 4461 4.985538 AGGAATGAAGGAAACAAGTAGCA 58.014 39.130 0.00 0.00 0.00 3.49
4252 4462 4.762251 AGGAATGAAGGAAACAAGTAGCAC 59.238 41.667 0.00 0.00 0.00 4.40
4253 4463 4.518970 GGAATGAAGGAAACAAGTAGCACA 59.481 41.667 0.00 0.00 0.00 4.57
4254 4464 5.438761 AATGAAGGAAACAAGTAGCACAC 57.561 39.130 0.00 0.00 0.00 3.82
4255 4465 3.211045 TGAAGGAAACAAGTAGCACACC 58.789 45.455 0.00 0.00 0.00 4.16
4256 4466 3.211045 GAAGGAAACAAGTAGCACACCA 58.789 45.455 0.00 0.00 0.00 4.17
4257 4467 3.508845 AGGAAACAAGTAGCACACCAT 57.491 42.857 0.00 0.00 0.00 3.55
4258 4468 3.832527 AGGAAACAAGTAGCACACCATT 58.167 40.909 0.00 0.00 0.00 3.16
4259 4469 3.569701 AGGAAACAAGTAGCACACCATTG 59.430 43.478 0.00 0.00 0.00 2.82
4260 4470 3.305335 GGAAACAAGTAGCACACCATTGG 60.305 47.826 0.00 0.00 0.00 3.16
4261 4471 1.909700 ACAAGTAGCACACCATTGGG 58.090 50.000 7.78 0.00 41.29 4.12
4280 4490 4.404654 CGGCCCACAAGCGCTTTC 62.405 66.667 22.51 7.21 0.00 2.62
4281 4491 2.985847 GGCCCACAAGCGCTTTCT 60.986 61.111 22.51 5.47 0.00 2.52
4282 4492 2.256461 GCCCACAAGCGCTTTCTG 59.744 61.111 22.51 17.95 0.00 3.02
4283 4493 2.555547 GCCCACAAGCGCTTTCTGT 61.556 57.895 22.51 14.29 0.00 3.41
4284 4494 1.283793 CCCACAAGCGCTTTCTGTG 59.716 57.895 26.51 26.51 0.00 3.66
4285 4495 1.283793 CCACAAGCGCTTTCTGTGG 59.716 57.895 33.70 33.70 43.06 4.17
4286 4496 2.320215 CACAAGCGCTTTCTGTGGA 58.680 52.632 26.01 0.00 0.00 4.02
4287 4497 0.236711 CACAAGCGCTTTCTGTGGAG 59.763 55.000 26.01 13.96 0.00 3.86
4288 4498 0.886490 ACAAGCGCTTTCTGTGGAGG 60.886 55.000 22.51 8.42 0.00 4.30
4289 4499 0.603707 CAAGCGCTTTCTGTGGAGGA 60.604 55.000 22.51 0.00 0.00 3.71
4290 4500 0.108585 AAGCGCTTTCTGTGGAGGAA 59.891 50.000 18.98 0.00 0.00 3.36
4291 4501 0.108585 AGCGCTTTCTGTGGAGGAAA 59.891 50.000 2.64 0.00 0.00 3.13
4292 4502 0.951558 GCGCTTTCTGTGGAGGAAAA 59.048 50.000 0.00 0.00 33.17 2.29
4293 4503 1.335051 GCGCTTTCTGTGGAGGAAAAC 60.335 52.381 0.00 0.00 33.17 2.43
4294 4504 2.222027 CGCTTTCTGTGGAGGAAAACT 58.778 47.619 0.00 0.00 33.17 2.66
4295 4505 2.618709 CGCTTTCTGTGGAGGAAAACTT 59.381 45.455 0.00 0.00 33.17 2.66
4296 4506 3.304057 CGCTTTCTGTGGAGGAAAACTTC 60.304 47.826 0.00 0.00 33.17 3.01
4297 4507 3.632145 GCTTTCTGTGGAGGAAAACTTCA 59.368 43.478 0.00 0.00 33.17 3.02
4298 4508 4.279420 GCTTTCTGTGGAGGAAAACTTCAT 59.721 41.667 0.00 0.00 36.97 2.57
4299 4509 5.563671 GCTTTCTGTGGAGGAAAACTTCATC 60.564 44.000 0.00 0.00 36.97 2.92
4300 4510 3.664107 TCTGTGGAGGAAAACTTCATCG 58.336 45.455 0.00 0.00 41.13 3.84
4301 4511 3.323691 TCTGTGGAGGAAAACTTCATCGA 59.676 43.478 0.00 0.00 41.13 3.59
4302 4512 3.399330 TGTGGAGGAAAACTTCATCGAC 58.601 45.455 8.62 8.62 45.36 4.20
4303 4513 2.412089 GTGGAGGAAAACTTCATCGACG 59.588 50.000 0.00 0.00 41.13 5.12
4304 4514 2.297880 TGGAGGAAAACTTCATCGACGA 59.702 45.455 0.00 0.00 41.13 4.20
4305 4515 3.056107 TGGAGGAAAACTTCATCGACGAT 60.056 43.478 4.05 4.05 41.13 3.73
4306 4516 3.307242 GGAGGAAAACTTCATCGACGATG 59.693 47.826 28.03 28.03 41.13 3.84
4307 4517 2.673368 AGGAAAACTTCATCGACGATGC 59.327 45.455 28.87 14.99 39.63 3.91
4308 4518 2.673368 GGAAAACTTCATCGACGATGCT 59.327 45.455 28.87 13.36 39.63 3.79
4309 4519 3.863424 GGAAAACTTCATCGACGATGCTA 59.137 43.478 28.87 18.96 39.63 3.49
4310 4520 4.026475 GGAAAACTTCATCGACGATGCTAG 60.026 45.833 28.87 26.80 39.63 3.42
4311 4521 3.784701 AACTTCATCGACGATGCTAGT 57.215 42.857 28.87 27.33 39.63 2.57
4312 4522 3.341857 ACTTCATCGACGATGCTAGTC 57.658 47.619 28.87 0.00 39.63 2.59
4313 4523 2.946329 ACTTCATCGACGATGCTAGTCT 59.054 45.455 28.87 12.85 39.63 3.24
4314 4524 3.002862 ACTTCATCGACGATGCTAGTCTC 59.997 47.826 28.87 0.00 39.63 3.36
4315 4525 2.561569 TCATCGACGATGCTAGTCTCA 58.438 47.619 28.87 9.83 39.63 3.27
4316 4526 2.288186 TCATCGACGATGCTAGTCTCAC 59.712 50.000 28.87 0.00 39.63 3.51
4317 4527 2.025589 TCGACGATGCTAGTCTCACT 57.974 50.000 0.00 0.00 36.53 3.41
4318 4528 3.175109 TCGACGATGCTAGTCTCACTA 57.825 47.619 0.00 0.00 36.53 2.74
4319 4529 3.729966 TCGACGATGCTAGTCTCACTAT 58.270 45.455 0.00 0.00 36.53 2.12
4320 4530 4.879598 TCGACGATGCTAGTCTCACTATA 58.120 43.478 0.00 0.00 36.53 1.31
4321 4531 5.295152 TCGACGATGCTAGTCTCACTATAA 58.705 41.667 0.00 0.00 36.53 0.98
4322 4532 5.405873 TCGACGATGCTAGTCTCACTATAAG 59.594 44.000 0.00 0.00 36.53 1.73
4323 4533 5.365403 ACGATGCTAGTCTCACTATAAGC 57.635 43.478 0.00 0.00 30.16 3.09
4324 4534 5.067273 ACGATGCTAGTCTCACTATAAGCT 58.933 41.667 0.00 0.00 30.69 3.74
4325 4535 6.231951 ACGATGCTAGTCTCACTATAAGCTA 58.768 40.000 0.00 0.00 30.69 3.32
4326 4536 6.370442 ACGATGCTAGTCTCACTATAAGCTAG 59.630 42.308 0.00 0.00 30.69 3.42
4327 4537 6.592220 CGATGCTAGTCTCACTATAAGCTAGA 59.408 42.308 0.00 0.00 30.69 2.43
4328 4538 7.412563 CGATGCTAGTCTCACTATAAGCTAGAC 60.413 44.444 2.87 2.87 37.44 2.59
4329 4539 6.592870 TGCTAGTCTCACTATAAGCTAGACA 58.407 40.000 11.96 0.03 39.20 3.41
4330 4540 7.227873 TGCTAGTCTCACTATAAGCTAGACAT 58.772 38.462 11.96 2.09 39.20 3.06
4331 4541 8.376270 TGCTAGTCTCACTATAAGCTAGACATA 58.624 37.037 11.96 2.93 39.20 2.29
4332 4542 9.221933 GCTAGTCTCACTATAAGCTAGACATAA 57.778 37.037 11.96 0.00 39.20 1.90
4335 4545 8.519526 AGTCTCACTATAAGCTAGACATAATGC 58.480 37.037 11.96 0.00 39.20 3.56
4336 4546 8.300286 GTCTCACTATAAGCTAGACATAATGCA 58.700 37.037 5.81 0.00 37.20 3.96
4337 4547 9.029368 TCTCACTATAAGCTAGACATAATGCAT 57.971 33.333 0.00 0.00 0.00 3.96
4340 4550 9.860898 CACTATAAGCTAGACATAATGCATACA 57.139 33.333 0.00 0.00 0.00 2.29
4346 4556 8.681486 AGCTAGACATAATGCATACAAAATGA 57.319 30.769 0.00 0.00 0.00 2.57
4347 4557 9.293404 AGCTAGACATAATGCATACAAAATGAT 57.707 29.630 0.00 0.00 0.00 2.45
4348 4558 9.903682 GCTAGACATAATGCATACAAAATGATT 57.096 29.630 0.00 0.00 0.00 2.57
4358 4568 9.800433 ATGCATACAAAATGATTCAAATTACGA 57.200 25.926 0.00 0.00 0.00 3.43
4359 4569 9.631452 TGCATACAAAATGATTCAAATTACGAA 57.369 25.926 0.00 0.00 0.00 3.85
4364 4574 9.743057 ACAAAATGATTCAAATTACGAAACTGA 57.257 25.926 0.00 0.00 0.00 3.41
4374 4584 8.656849 TCAAATTACGAAACTGAATAGAGAAGC 58.343 33.333 0.00 0.00 0.00 3.86
4375 4585 8.443160 CAAATTACGAAACTGAATAGAGAAGCA 58.557 33.333 0.00 0.00 0.00 3.91
4376 4586 8.723942 AATTACGAAACTGAATAGAGAAGCAT 57.276 30.769 0.00 0.00 0.00 3.79
4377 4587 7.525688 TTACGAAACTGAATAGAGAAGCATG 57.474 36.000 0.00 0.00 0.00 4.06
4378 4588 4.872691 ACGAAACTGAATAGAGAAGCATGG 59.127 41.667 0.00 0.00 0.00 3.66
4379 4589 4.260538 CGAAACTGAATAGAGAAGCATGGC 60.261 45.833 0.00 0.00 0.00 4.40
4380 4590 4.500499 AACTGAATAGAGAAGCATGGCT 57.500 40.909 0.00 0.00 42.56 4.75
4381 4591 3.806380 ACTGAATAGAGAAGCATGGCTG 58.194 45.455 0.00 0.00 39.62 4.85
4382 4592 3.139850 CTGAATAGAGAAGCATGGCTGG 58.860 50.000 0.00 0.00 39.62 4.85
4383 4593 2.773661 TGAATAGAGAAGCATGGCTGGA 59.226 45.455 0.00 0.00 39.62 3.86
4384 4594 3.393609 TGAATAGAGAAGCATGGCTGGAT 59.606 43.478 0.00 0.00 39.62 3.41
4385 4595 2.924757 TAGAGAAGCATGGCTGGATG 57.075 50.000 0.00 0.00 39.62 3.51
4386 4596 1.210538 AGAGAAGCATGGCTGGATGA 58.789 50.000 0.00 0.00 39.62 2.92
4387 4597 1.562942 AGAGAAGCATGGCTGGATGAA 59.437 47.619 0.00 0.00 39.62 2.57
4388 4598 1.674962 GAGAAGCATGGCTGGATGAAC 59.325 52.381 0.00 0.00 39.62 3.18
4389 4599 1.005097 AGAAGCATGGCTGGATGAACA 59.995 47.619 0.00 0.00 39.62 3.18
4390 4600 1.820519 GAAGCATGGCTGGATGAACAA 59.179 47.619 0.00 0.00 39.62 2.83
4391 4601 1.471119 AGCATGGCTGGATGAACAAG 58.529 50.000 0.00 0.00 37.57 3.16
4392 4602 1.005097 AGCATGGCTGGATGAACAAGA 59.995 47.619 0.00 0.00 37.57 3.02
4393 4603 1.404391 GCATGGCTGGATGAACAAGAG 59.596 52.381 0.00 0.00 0.00 2.85
4394 4604 2.022195 CATGGCTGGATGAACAAGAGG 58.978 52.381 0.00 0.00 0.00 3.69
4395 4605 0.329261 TGGCTGGATGAACAAGAGGG 59.671 55.000 0.00 0.00 0.00 4.30
4396 4606 0.394899 GGCTGGATGAACAAGAGGGG 60.395 60.000 0.00 0.00 0.00 4.79
4397 4607 0.620556 GCTGGATGAACAAGAGGGGA 59.379 55.000 0.00 0.00 0.00 4.81
4398 4608 1.680249 GCTGGATGAACAAGAGGGGAC 60.680 57.143 0.00 0.00 0.00 4.46
4399 4609 1.630369 CTGGATGAACAAGAGGGGACA 59.370 52.381 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 66 8.129161 TGCAATTGAAACATTTAAACTGACTG 57.871 30.769 10.34 0.00 0.00 3.51
133 137 9.743057 TTTGAAACATACAAAATACAGGTTGAG 57.257 29.630 0.00 0.00 34.89 3.02
183 191 6.716628 ACTTGGAAATGTCTAATGAAGAAGCA 59.283 34.615 0.00 0.00 35.47 3.91
210 218 3.427909 CGCATGCACACCTACAAAATGAT 60.428 43.478 19.57 0.00 0.00 2.45
279 287 1.304713 CCTCAGCAAACCCATGGCT 60.305 57.895 6.09 0.00 38.70 4.75
364 372 2.227149 TCAACGTCGAGTAAGCAGCTAA 59.773 45.455 0.00 0.00 0.00 3.09
425 433 7.222611 GCTGAGAACTAAGCAAATGAAAACAAA 59.777 33.333 6.32 0.00 39.31 2.83
627 637 2.225467 GGGAACTCATAGCCATGCTTC 58.775 52.381 0.00 0.00 40.44 3.86
652 662 1.308069 AACCGATGGCTGACATGTGC 61.308 55.000 1.15 0.18 40.72 4.57
737 747 1.270678 GGTCGAGGTTGTTGCTAAGGT 60.271 52.381 0.00 0.00 0.00 3.50
771 781 4.993705 ACAAGGGATGTTTCCAAGACTA 57.006 40.909 0.00 0.00 44.60 2.59
836 846 6.041409 AGAGGAAGTACCATCATCATGTGTAG 59.959 42.308 11.90 0.00 42.04 2.74
936 947 7.716612 ACAAGTAAACAGAATTTTCCCTTGAG 58.283 34.615 0.00 0.00 34.39 3.02
1386 1520 6.624861 CGGACTGCAACAAAACCATATACATT 60.625 38.462 0.00 0.00 0.00 2.71
1450 1584 0.391661 CACTGGATCAGTTCGGGGTG 60.392 60.000 0.00 0.00 42.59 4.61
1463 1597 0.034756 CCGTGTTGATGGTCACTGGA 59.965 55.000 0.00 0.00 33.57 3.86
1551 1686 1.155042 GCAGAAGCTTGACTGGACAG 58.845 55.000 2.10 0.00 37.91 3.51
1555 1690 2.684843 GCCGCAGAAGCTTGACTGG 61.685 63.158 2.10 1.43 39.10 4.00
1610 1748 7.553044 GGACCTACTGTGCATTTTACTCTAAAT 59.447 37.037 0.00 0.00 34.99 1.40
1761 1900 2.320587 GCAGTTGTCGACCTGCCAG 61.321 63.158 26.90 9.67 36.90 4.85
1900 2039 7.888021 TGTTTTGGTTAGTTGATGGATAGATGT 59.112 33.333 0.00 0.00 0.00 3.06
1907 2046 5.451242 GCAAGTGTTTTGGTTAGTTGATGGA 60.451 40.000 0.00 0.00 0.00 3.41
2012 2152 0.673333 GATGCACACCACCGTGATCA 60.673 55.000 0.00 0.00 43.14 2.92
2101 2241 0.178932 AGTCTAGTGTGTGCCCTCCA 60.179 55.000 0.00 0.00 0.00 3.86
2105 2245 2.426024 TCGATTAGTCTAGTGTGTGCCC 59.574 50.000 0.00 0.00 0.00 5.36
2216 2356 1.408127 CCACCACAGACTTGTTGTCCA 60.408 52.381 0.00 0.00 46.46 4.02
2316 2479 0.447406 TTGCACATGTAGCATGTCGC 59.553 50.000 19.11 19.57 42.33 5.19
2321 2484 3.366679 GCTTTGACTTGCACATGTAGCAT 60.367 43.478 19.11 9.10 42.33 3.79
2325 2488 3.475575 TCAGCTTTGACTTGCACATGTA 58.524 40.909 0.00 0.00 0.00 2.29
2354 2517 1.203250 TGTCACCCACAGTCCTATCCA 60.203 52.381 0.00 0.00 0.00 3.41
2366 2529 2.092646 AGTTTGCTAAGTGTGTCACCCA 60.093 45.455 0.00 0.00 34.49 4.51
2392 2586 5.893824 CCTAAAACTATTTGAGGGATGCCTT 59.106 40.000 7.42 0.00 0.00 4.35
2568 2765 2.099756 AGCCAAAAGAAGTGAACAGTGC 59.900 45.455 0.00 0.00 0.00 4.40
2616 2813 2.543777 TACCAAGGAAGTGTGCTGTC 57.456 50.000 0.00 0.00 0.00 3.51
2763 2967 5.218885 CAACATATCGGAGACAGAGATGTC 58.781 45.833 11.05 0.06 46.05 3.06
2817 3021 8.244113 GTCTGAATTTCGACAGGGAAAATAATT 58.756 33.333 13.07 0.00 39.19 1.40
2818 3022 7.148069 GGTCTGAATTTCGACAGGGAAAATAAT 60.148 37.037 17.13 0.00 39.19 1.28
2819 3023 6.150474 GGTCTGAATTTCGACAGGGAAAATAA 59.850 38.462 17.13 0.00 39.19 1.40
2820 3024 5.646360 GGTCTGAATTTCGACAGGGAAAATA 59.354 40.000 17.13 0.00 39.19 1.40
2821 3025 4.459337 GGTCTGAATTTCGACAGGGAAAAT 59.541 41.667 17.13 0.00 39.19 1.82
2875 3079 4.939399 TGTCATGGACATGCCTCG 57.061 55.556 7.41 0.18 37.67 4.63
2965 3169 3.357166 ACGACTCTCAATAAGATCGGC 57.643 47.619 0.00 0.00 38.37 5.54
3000 3204 2.083774 TCCATCGTGCACTCAATTTCC 58.916 47.619 16.19 0.00 0.00 3.13
3197 3401 1.302033 CCAGCAGAGGCAACGAACT 60.302 57.895 0.00 0.00 44.61 3.01
3258 3462 4.096231 TCCATGAAGTCAACAAACAGTGTG 59.904 41.667 0.00 0.00 40.60 3.82
3358 3562 1.219522 GAAACCGTCACCGACACCAG 61.220 60.000 0.00 0.00 35.63 4.00
3417 3621 8.662781 TTAGTTGACATTCTGCATTACCTATC 57.337 34.615 0.00 0.00 0.00 2.08
3418 3622 9.277783 GATTAGTTGACATTCTGCATTACCTAT 57.722 33.333 0.00 0.00 0.00 2.57
3420 3624 6.258727 CGATTAGTTGACATTCTGCATTACCT 59.741 38.462 0.00 0.00 0.00 3.08
3421 3625 6.422223 CGATTAGTTGACATTCTGCATTACC 58.578 40.000 0.00 0.00 0.00 2.85
3422 3626 5.904080 GCGATTAGTTGACATTCTGCATTAC 59.096 40.000 0.00 0.00 0.00 1.89
3423 3627 5.007626 GGCGATTAGTTGACATTCTGCATTA 59.992 40.000 0.00 0.00 0.00 1.90
3424 3628 4.201950 GGCGATTAGTTGACATTCTGCATT 60.202 41.667 0.00 0.00 0.00 3.56
3432 3636 2.027192 ACAGGTGGCGATTAGTTGACAT 60.027 45.455 0.00 0.00 0.00 3.06
3443 3647 5.941058 TGAATTAAAATCTAACAGGTGGCGA 59.059 36.000 0.00 0.00 0.00 5.54
3524 3728 6.632035 GTCGATAAGAATACTCCGTACAAGTG 59.368 42.308 7.90 0.00 0.00 3.16
3532 3736 4.468643 GCTGAGTCGATAAGAATACTCCG 58.531 47.826 0.00 0.00 38.04 4.63
3534 3738 5.699097 AGGCTGAGTCGATAAGAATACTC 57.301 43.478 0.00 0.00 39.04 2.59
3552 3762 1.670406 CTCTCACTGCGCAAAGGCT 60.670 57.895 13.05 0.00 38.10 4.58
3576 3786 8.865001 CGTCAGTAAAAGTTTGAATTTCCAAAA 58.135 29.630 0.00 0.00 37.72 2.44
3577 3787 8.244802 TCGTCAGTAAAAGTTTGAATTTCCAAA 58.755 29.630 0.00 0.00 34.03 3.28
3578 3788 7.763356 TCGTCAGTAAAAGTTTGAATTTCCAA 58.237 30.769 0.00 0.00 0.00 3.53
3579 3789 7.323049 TCGTCAGTAAAAGTTTGAATTTCCA 57.677 32.000 0.00 0.00 0.00 3.53
3580 3790 8.623310 TTTCGTCAGTAAAAGTTTGAATTTCC 57.377 30.769 0.00 0.00 0.00 3.13
3585 3795 8.865001 CCAATTTTTCGTCAGTAAAAGTTTGAA 58.135 29.630 0.00 0.00 31.78 2.69
3586 3796 7.489757 CCCAATTTTTCGTCAGTAAAAGTTTGA 59.510 33.333 0.00 0.00 31.78 2.69
3587 3797 7.489757 TCCCAATTTTTCGTCAGTAAAAGTTTG 59.510 33.333 0.00 0.00 31.78 2.93
3588 3798 7.548967 TCCCAATTTTTCGTCAGTAAAAGTTT 58.451 30.769 0.00 0.00 31.78 2.66
3589 3799 7.102847 TCCCAATTTTTCGTCAGTAAAAGTT 57.897 32.000 0.00 0.00 31.78 2.66
3590 3800 6.320418 ACTCCCAATTTTTCGTCAGTAAAAGT 59.680 34.615 0.00 0.00 31.78 2.66
3591 3801 6.735130 ACTCCCAATTTTTCGTCAGTAAAAG 58.265 36.000 0.00 0.00 31.78 2.27
3592 3802 6.702716 ACTCCCAATTTTTCGTCAGTAAAA 57.297 33.333 0.00 0.00 32.58 1.52
3593 3803 6.702716 AACTCCCAATTTTTCGTCAGTAAA 57.297 33.333 0.00 0.00 0.00 2.01
3594 3804 6.319152 TCAAACTCCCAATTTTTCGTCAGTAA 59.681 34.615 0.00 0.00 0.00 2.24
3595 3805 5.823570 TCAAACTCCCAATTTTTCGTCAGTA 59.176 36.000 0.00 0.00 0.00 2.74
3596 3806 4.642885 TCAAACTCCCAATTTTTCGTCAGT 59.357 37.500 0.00 0.00 0.00 3.41
3597 3807 5.181690 TCAAACTCCCAATTTTTCGTCAG 57.818 39.130 0.00 0.00 0.00 3.51
3598 3808 5.782893 ATCAAACTCCCAATTTTTCGTCA 57.217 34.783 0.00 0.00 0.00 4.35
3599 3809 7.477144 AAAATCAAACTCCCAATTTTTCGTC 57.523 32.000 0.00 0.00 29.42 4.20
3600 3810 9.554395 AATAAAATCAAACTCCCAATTTTTCGT 57.446 25.926 0.00 0.00 34.25 3.85
3649 3859 9.261180 GCTGAAAATTTTAGCTTTAGGAAAGTT 57.739 29.630 14.17 0.00 40.64 2.66
3650 3860 8.642432 AGCTGAAAATTTTAGCTTTAGGAAAGT 58.358 29.630 17.65 0.00 44.87 2.66
3710 3920 7.505585 TCTTCTCCTTTTATGAAGCTCCAAAAA 59.494 33.333 0.00 0.00 37.63 1.94
3711 3921 7.004086 TCTTCTCCTTTTATGAAGCTCCAAAA 58.996 34.615 0.00 0.00 37.63 2.44
3712 3922 6.542821 TCTTCTCCTTTTATGAAGCTCCAAA 58.457 36.000 0.00 0.00 37.63 3.28
3713 3923 6.126863 TCTTCTCCTTTTATGAAGCTCCAA 57.873 37.500 0.00 0.00 37.63 3.53
3714 3924 5.762179 TCTTCTCCTTTTATGAAGCTCCA 57.238 39.130 0.00 0.00 37.63 3.86
3715 3925 7.227711 GGTTATCTTCTCCTTTTATGAAGCTCC 59.772 40.741 0.00 0.00 37.63 4.70
3716 3926 7.227711 GGGTTATCTTCTCCTTTTATGAAGCTC 59.772 40.741 0.00 0.00 37.63 4.09
3717 3927 7.057264 GGGTTATCTTCTCCTTTTATGAAGCT 58.943 38.462 0.00 0.00 37.63 3.74
3718 3928 7.012799 CAGGGTTATCTTCTCCTTTTATGAAGC 59.987 40.741 0.00 0.00 37.63 3.86
3719 3929 8.267894 TCAGGGTTATCTTCTCCTTTTATGAAG 58.732 37.037 0.00 0.00 38.69 3.02
3720 3930 8.158025 TCAGGGTTATCTTCTCCTTTTATGAA 57.842 34.615 0.00 0.00 0.00 2.57
3721 3931 7.749377 TCAGGGTTATCTTCTCCTTTTATGA 57.251 36.000 0.00 0.00 0.00 2.15
3722 3932 8.807948 TTTCAGGGTTATCTTCTCCTTTTATG 57.192 34.615 0.00 0.00 0.00 1.90
3723 3933 9.822727 TTTTTCAGGGTTATCTTCTCCTTTTAT 57.177 29.630 0.00 0.00 0.00 1.40
3746 3956 3.000041 TGCTCGCTCGTGTATCATTTTT 59.000 40.909 0.00 0.00 0.00 1.94
3747 3957 2.348666 GTGCTCGCTCGTGTATCATTTT 59.651 45.455 0.00 0.00 0.00 1.82
3748 3958 1.927174 GTGCTCGCTCGTGTATCATTT 59.073 47.619 0.00 0.00 0.00 2.32
3749 3959 1.560923 GTGCTCGCTCGTGTATCATT 58.439 50.000 0.00 0.00 0.00 2.57
3750 3960 0.249073 GGTGCTCGCTCGTGTATCAT 60.249 55.000 0.00 0.00 0.00 2.45
3751 3961 1.138883 GGTGCTCGCTCGTGTATCA 59.861 57.895 0.00 0.00 0.00 2.15
3752 3962 1.138883 TGGTGCTCGCTCGTGTATC 59.861 57.895 0.00 0.00 0.00 2.24
3753 3963 1.153823 GTGGTGCTCGCTCGTGTAT 60.154 57.895 0.00 0.00 0.00 2.29
3754 3964 2.257371 GTGGTGCTCGCTCGTGTA 59.743 61.111 0.00 0.00 0.00 2.90
3755 3965 3.606662 AGTGGTGCTCGCTCGTGT 61.607 61.111 0.00 0.00 0.00 4.49
3756 3966 3.108289 CAGTGGTGCTCGCTCGTG 61.108 66.667 0.00 0.00 33.21 4.35
3757 3967 3.274455 CTCAGTGGTGCTCGCTCGT 62.274 63.158 0.00 0.00 33.21 4.18
3758 3968 2.505777 CTCAGTGGTGCTCGCTCG 60.506 66.667 0.00 0.00 33.21 5.03
3759 3969 2.125753 CCTCAGTGGTGCTCGCTC 60.126 66.667 0.00 0.00 33.21 5.03
3760 3970 2.601666 TCCTCAGTGGTGCTCGCT 60.602 61.111 0.00 0.00 37.07 4.93
3761 3971 2.125753 CTCCTCAGTGGTGCTCGC 60.126 66.667 0.00 0.00 37.07 5.03
3762 3972 0.962855 TCTCTCCTCAGTGGTGCTCG 60.963 60.000 0.00 0.00 37.07 5.03
3763 3973 1.067213 GTTCTCTCCTCAGTGGTGCTC 60.067 57.143 0.00 0.00 37.07 4.26
3764 3974 0.972883 GTTCTCTCCTCAGTGGTGCT 59.027 55.000 0.00 0.00 37.07 4.40
3765 3975 0.036858 GGTTCTCTCCTCAGTGGTGC 60.037 60.000 0.00 0.00 37.07 5.01
3766 3976 1.001406 GTGGTTCTCTCCTCAGTGGTG 59.999 57.143 0.00 0.00 37.07 4.17
3767 3977 1.343069 GTGGTTCTCTCCTCAGTGGT 58.657 55.000 0.00 0.00 37.07 4.16
3768 3978 1.342074 TGTGGTTCTCTCCTCAGTGG 58.658 55.000 0.00 0.00 37.10 4.00
3769 3979 2.103094 TGTTGTGGTTCTCTCCTCAGTG 59.897 50.000 0.00 0.00 33.48 3.66
3770 3980 2.398588 TGTTGTGGTTCTCTCCTCAGT 58.601 47.619 0.00 0.00 33.48 3.41
3771 3981 3.134458 GTTGTTGTGGTTCTCTCCTCAG 58.866 50.000 0.00 0.00 33.48 3.35
3772 3982 2.483013 CGTTGTTGTGGTTCTCTCCTCA 60.483 50.000 0.00 0.00 0.00 3.86
3773 3983 2.135933 CGTTGTTGTGGTTCTCTCCTC 58.864 52.381 0.00 0.00 0.00 3.71
3774 3984 1.485066 ACGTTGTTGTGGTTCTCTCCT 59.515 47.619 0.00 0.00 0.00 3.69
3775 3985 1.865340 GACGTTGTTGTGGTTCTCTCC 59.135 52.381 0.00 0.00 0.00 3.71
3776 3986 2.822764 AGACGTTGTTGTGGTTCTCTC 58.177 47.619 0.00 0.00 0.00 3.20
3777 3987 2.981859 AGACGTTGTTGTGGTTCTCT 57.018 45.000 0.00 0.00 0.00 3.10
3778 3988 4.025979 CAGTTAGACGTTGTTGTGGTTCTC 60.026 45.833 0.00 0.00 0.00 2.87
3779 3989 3.869246 CAGTTAGACGTTGTTGTGGTTCT 59.131 43.478 0.00 0.00 0.00 3.01
3780 3990 3.619929 ACAGTTAGACGTTGTTGTGGTTC 59.380 43.478 0.00 0.00 0.00 3.62
3781 3991 3.602483 ACAGTTAGACGTTGTTGTGGTT 58.398 40.909 0.00 0.00 0.00 3.67
3782 3992 3.255969 ACAGTTAGACGTTGTTGTGGT 57.744 42.857 0.00 0.00 0.00 4.16
3783 3993 3.935450 CAACAGTTAGACGTTGTTGTGG 58.065 45.455 17.80 1.96 44.00 4.17
3789 3999 2.221055 GCTCCACAACAGTTAGACGTTG 59.779 50.000 0.00 0.00 46.31 4.10
3790 4000 2.480845 GCTCCACAACAGTTAGACGTT 58.519 47.619 0.00 0.00 0.00 3.99
3791 4001 1.602165 CGCTCCACAACAGTTAGACGT 60.602 52.381 0.00 0.00 0.00 4.34
3792 4002 1.060713 CGCTCCACAACAGTTAGACG 58.939 55.000 0.00 0.00 0.00 4.18
3793 4003 1.270147 ACCGCTCCACAACAGTTAGAC 60.270 52.381 0.00 0.00 0.00 2.59
3794 4004 1.045407 ACCGCTCCACAACAGTTAGA 58.955 50.000 0.00 0.00 0.00 2.10
3795 4005 1.878953 AACCGCTCCACAACAGTTAG 58.121 50.000 0.00 0.00 0.00 2.34
3796 4006 2.215196 GAAACCGCTCCACAACAGTTA 58.785 47.619 0.00 0.00 0.00 2.24
3797 4007 1.021968 GAAACCGCTCCACAACAGTT 58.978 50.000 0.00 0.00 0.00 3.16
3798 4008 0.107410 TGAAACCGCTCCACAACAGT 60.107 50.000 0.00 0.00 0.00 3.55
3799 4009 1.238439 ATGAAACCGCTCCACAACAG 58.762 50.000 0.00 0.00 0.00 3.16
3800 4010 1.606668 GAATGAAACCGCTCCACAACA 59.393 47.619 0.00 0.00 0.00 3.33
3801 4011 1.606668 TGAATGAAACCGCTCCACAAC 59.393 47.619 0.00 0.00 0.00 3.32
3802 4012 1.879380 CTGAATGAAACCGCTCCACAA 59.121 47.619 0.00 0.00 0.00 3.33
3803 4013 1.522668 CTGAATGAAACCGCTCCACA 58.477 50.000 0.00 0.00 0.00 4.17
3804 4014 0.804989 CCTGAATGAAACCGCTCCAC 59.195 55.000 0.00 0.00 0.00 4.02
3805 4015 0.400213 ACCTGAATGAAACCGCTCCA 59.600 50.000 0.00 0.00 0.00 3.86
3806 4016 1.534729 AACCTGAATGAAACCGCTCC 58.465 50.000 0.00 0.00 0.00 4.70
3807 4017 3.643159 AAAACCTGAATGAAACCGCTC 57.357 42.857 0.00 0.00 0.00 5.03
3825 4035 4.521256 CGGTCAACCCTCCTAATTCAAAAA 59.479 41.667 0.00 0.00 0.00 1.94
3826 4036 4.076394 CGGTCAACCCTCCTAATTCAAAA 58.924 43.478 0.00 0.00 0.00 2.44
3827 4037 3.328343 TCGGTCAACCCTCCTAATTCAAA 59.672 43.478 0.00 0.00 0.00 2.69
3828 4038 2.907696 TCGGTCAACCCTCCTAATTCAA 59.092 45.455 0.00 0.00 0.00 2.69
3829 4039 2.500098 CTCGGTCAACCCTCCTAATTCA 59.500 50.000 0.00 0.00 0.00 2.57
3830 4040 2.764572 TCTCGGTCAACCCTCCTAATTC 59.235 50.000 0.00 0.00 0.00 2.17
3831 4041 2.829023 TCTCGGTCAACCCTCCTAATT 58.171 47.619 0.00 0.00 0.00 1.40
3832 4042 2.544844 TCTCGGTCAACCCTCCTAAT 57.455 50.000 0.00 0.00 0.00 1.73
3833 4043 2.291996 TGATCTCGGTCAACCCTCCTAA 60.292 50.000 0.00 0.00 0.00 2.69
3834 4044 1.286849 TGATCTCGGTCAACCCTCCTA 59.713 52.381 0.00 0.00 0.00 2.94
3835 4045 0.041238 TGATCTCGGTCAACCCTCCT 59.959 55.000 0.00 0.00 0.00 3.69
3836 4046 0.902531 TTGATCTCGGTCAACCCTCC 59.097 55.000 0.00 0.00 33.41 4.30
3837 4047 2.990066 ATTGATCTCGGTCAACCCTC 57.010 50.000 0.00 0.00 40.60 4.30
3838 4048 3.009033 TCAAATTGATCTCGGTCAACCCT 59.991 43.478 0.00 0.00 40.60 4.34
3839 4049 3.343617 TCAAATTGATCTCGGTCAACCC 58.656 45.455 0.00 0.00 40.60 4.11
3840 4050 5.154222 GTTTCAAATTGATCTCGGTCAACC 58.846 41.667 0.00 0.00 40.60 3.77
3841 4051 5.154222 GGTTTCAAATTGATCTCGGTCAAC 58.846 41.667 0.00 0.00 40.60 3.18
3842 4052 4.824537 TGGTTTCAAATTGATCTCGGTCAA 59.175 37.500 0.00 0.00 41.88 3.18
3843 4053 4.393834 TGGTTTCAAATTGATCTCGGTCA 58.606 39.130 0.00 0.00 0.00 4.02
3844 4054 5.371115 TTGGTTTCAAATTGATCTCGGTC 57.629 39.130 0.00 0.00 0.00 4.79
3845 4055 5.782893 TTTGGTTTCAAATTGATCTCGGT 57.217 34.783 0.00 0.00 37.89 4.69
3846 4056 5.634859 CCTTTTGGTTTCAAATTGATCTCGG 59.365 40.000 0.00 0.00 41.84 4.63
3847 4057 5.634859 CCCTTTTGGTTTCAAATTGATCTCG 59.365 40.000 0.00 0.00 41.84 4.04
3848 4058 6.758254 TCCCTTTTGGTTTCAAATTGATCTC 58.242 36.000 0.00 0.00 41.84 2.75
3849 4059 6.745794 TCCCTTTTGGTTTCAAATTGATCT 57.254 33.333 0.00 0.00 41.84 2.75
3850 4060 7.800155 TTTCCCTTTTGGTTTCAAATTGATC 57.200 32.000 0.00 0.00 41.84 2.92
3851 4061 8.586879 TTTTTCCCTTTTGGTTTCAAATTGAT 57.413 26.923 0.00 0.00 41.84 2.57
3852 4062 7.885399 TCTTTTTCCCTTTTGGTTTCAAATTGA 59.115 29.630 0.00 0.00 41.84 2.57
3853 4063 8.049655 TCTTTTTCCCTTTTGGTTTCAAATTG 57.950 30.769 0.00 0.00 41.84 2.32
3854 4064 8.642935 TTCTTTTTCCCTTTTGGTTTCAAATT 57.357 26.923 0.00 0.00 41.84 1.82
3855 4065 8.642935 TTTCTTTTTCCCTTTTGGTTTCAAAT 57.357 26.923 0.00 0.00 41.84 2.32
3856 4066 8.465273 TTTTCTTTTTCCCTTTTGGTTTCAAA 57.535 26.923 0.00 0.00 40.71 2.69
3857 4067 8.465273 TTTTTCTTTTTCCCTTTTGGTTTCAA 57.535 26.923 0.00 0.00 38.10 2.69
3858 4068 7.939588 TCTTTTTCTTTTTCCCTTTTGGTTTCA 59.060 29.630 0.00 0.00 38.10 2.69
3859 4069 8.330466 TCTTTTTCTTTTTCCCTTTTGGTTTC 57.670 30.769 0.00 0.00 38.10 2.78
3860 4070 8.698973 TTCTTTTTCTTTTTCCCTTTTGGTTT 57.301 26.923 0.00 0.00 38.10 3.27
3861 4071 8.160765 TCTTCTTTTTCTTTTTCCCTTTTGGTT 58.839 29.630 0.00 0.00 38.10 3.67
3862 4072 7.685481 TCTTCTTTTTCTTTTTCCCTTTTGGT 58.315 30.769 0.00 0.00 38.10 3.67
3863 4073 8.560355 TTCTTCTTTTTCTTTTTCCCTTTTGG 57.440 30.769 0.00 0.00 39.97 3.28
3864 4074 9.992910 CATTCTTCTTTTTCTTTTTCCCTTTTG 57.007 29.630 0.00 0.00 0.00 2.44
3865 4075 9.958180 TCATTCTTCTTTTTCTTTTTCCCTTTT 57.042 25.926 0.00 0.00 0.00 2.27
3866 4076 9.958180 TTCATTCTTCTTTTTCTTTTTCCCTTT 57.042 25.926 0.00 0.00 0.00 3.11
3867 4077 9.958180 TTTCATTCTTCTTTTTCTTTTTCCCTT 57.042 25.926 0.00 0.00 0.00 3.95
3913 4123 9.482627 TGTTTTGCATTATTTATTCGGTTTCTT 57.517 25.926 0.00 0.00 0.00 2.52
3914 4124 9.139174 CTGTTTTGCATTATTTATTCGGTTTCT 57.861 29.630 0.00 0.00 0.00 2.52
3915 4125 8.921670 ACTGTTTTGCATTATTTATTCGGTTTC 58.078 29.630 0.00 0.00 0.00 2.78
3916 4126 8.707839 CACTGTTTTGCATTATTTATTCGGTTT 58.292 29.630 0.00 0.00 0.00 3.27
3917 4127 8.085296 TCACTGTTTTGCATTATTTATTCGGTT 58.915 29.630 0.00 0.00 0.00 4.44
3918 4128 7.598278 TCACTGTTTTGCATTATTTATTCGGT 58.402 30.769 0.00 0.00 0.00 4.69
3919 4129 8.459521 TTCACTGTTTTGCATTATTTATTCGG 57.540 30.769 0.00 0.00 0.00 4.30
3920 4130 9.726034 GTTTCACTGTTTTGCATTATTTATTCG 57.274 29.630 0.00 0.00 0.00 3.34
3922 4132 9.777297 AGGTTTCACTGTTTTGCATTATTTATT 57.223 25.926 0.00 0.00 0.00 1.40
3928 4138 9.906660 CTTTATAGGTTTCACTGTTTTGCATTA 57.093 29.630 0.00 0.00 0.00 1.90
3929 4139 8.637986 TCTTTATAGGTTTCACTGTTTTGCATT 58.362 29.630 0.00 0.00 0.00 3.56
3930 4140 8.177119 TCTTTATAGGTTTCACTGTTTTGCAT 57.823 30.769 0.00 0.00 0.00 3.96
3931 4141 7.575414 TCTTTATAGGTTTCACTGTTTTGCA 57.425 32.000 0.00 0.00 0.00 4.08
3932 4142 8.752254 GTTTCTTTATAGGTTTCACTGTTTTGC 58.248 33.333 0.00 0.00 0.00 3.68
3933 4143 9.796120 TGTTTCTTTATAGGTTTCACTGTTTTG 57.204 29.630 0.00 0.00 0.00 2.44
3937 4147 8.630037 CCTTTGTTTCTTTATAGGTTTCACTGT 58.370 33.333 0.00 0.00 0.00 3.55
3938 4148 8.846211 TCCTTTGTTTCTTTATAGGTTTCACTG 58.154 33.333 0.00 0.00 0.00 3.66
3939 4149 8.990163 TCCTTTGTTTCTTTATAGGTTTCACT 57.010 30.769 0.00 0.00 0.00 3.41
3951 4161 9.936759 TTCAACAGTATTTTCCTTTGTTTCTTT 57.063 25.926 0.00 0.00 30.15 2.52
3952 4162 9.936759 TTTCAACAGTATTTTCCTTTGTTTCTT 57.063 25.926 0.00 0.00 30.15 2.52
3953 4163 9.936759 TTTTCAACAGTATTTTCCTTTGTTTCT 57.063 25.926 0.00 0.00 30.15 2.52
3956 4166 9.495572 TGTTTTTCAACAGTATTTTCCTTTGTT 57.504 25.926 0.00 0.00 38.03 2.83
3957 4167 9.495572 TTGTTTTTCAACAGTATTTTCCTTTGT 57.504 25.926 0.00 0.00 43.92 2.83
3958 4168 9.971744 CTTGTTTTTCAACAGTATTTTCCTTTG 57.028 29.630 0.00 0.00 43.92 2.77
3959 4169 9.936759 TCTTGTTTTTCAACAGTATTTTCCTTT 57.063 25.926 0.00 0.00 43.92 3.11
3960 4170 9.936759 TTCTTGTTTTTCAACAGTATTTTCCTT 57.063 25.926 0.00 0.00 43.92 3.36
3961 4171 9.936759 TTTCTTGTTTTTCAACAGTATTTTCCT 57.063 25.926 0.00 0.00 43.92 3.36
4024 4234 8.966868 TGGTTTACATCTGTCTTTCTTTTCTTT 58.033 29.630 0.00 0.00 0.00 2.52
4025 4235 8.519799 TGGTTTACATCTGTCTTTCTTTTCTT 57.480 30.769 0.00 0.00 0.00 2.52
4026 4236 8.571336 CATGGTTTACATCTGTCTTTCTTTTCT 58.429 33.333 0.00 0.00 37.84 2.52
4027 4237 8.567948 TCATGGTTTACATCTGTCTTTCTTTTC 58.432 33.333 0.00 0.00 37.84 2.29
4028 4238 8.463930 TCATGGTTTACATCTGTCTTTCTTTT 57.536 30.769 0.00 0.00 37.84 2.27
4029 4239 8.463930 TTCATGGTTTACATCTGTCTTTCTTT 57.536 30.769 0.00 0.00 37.84 2.52
4030 4240 8.463930 TTTCATGGTTTACATCTGTCTTTCTT 57.536 30.769 0.00 0.00 37.84 2.52
4031 4241 8.641498 ATTTCATGGTTTACATCTGTCTTTCT 57.359 30.769 0.00 0.00 37.84 2.52
4034 4244 8.462016 GCTTATTTCATGGTTTACATCTGTCTT 58.538 33.333 0.00 0.00 37.84 3.01
4035 4245 7.611467 TGCTTATTTCATGGTTTACATCTGTCT 59.389 33.333 0.00 0.00 37.84 3.41
4036 4246 7.761409 TGCTTATTTCATGGTTTACATCTGTC 58.239 34.615 0.00 0.00 37.84 3.51
4037 4247 7.701539 TGCTTATTTCATGGTTTACATCTGT 57.298 32.000 0.00 0.00 37.84 3.41
4038 4248 8.984891 TTTGCTTATTTCATGGTTTACATCTG 57.015 30.769 0.00 0.00 37.84 2.90
4039 4249 9.643693 CTTTTGCTTATTTCATGGTTTACATCT 57.356 29.630 0.00 0.00 37.84 2.90
4040 4250 9.638239 TCTTTTGCTTATTTCATGGTTTACATC 57.362 29.630 0.00 0.00 37.84 3.06
4041 4251 9.995003 TTCTTTTGCTTATTTCATGGTTTACAT 57.005 25.926 0.00 0.00 41.57 2.29
4042 4252 9.823647 TTTCTTTTGCTTATTTCATGGTTTACA 57.176 25.926 0.00 0.00 0.00 2.41
4046 4256 8.620416 GGTTTTTCTTTTGCTTATTTCATGGTT 58.380 29.630 0.00 0.00 0.00 3.67
4047 4257 7.772757 TGGTTTTTCTTTTGCTTATTTCATGGT 59.227 29.630 0.00 0.00 0.00 3.55
4048 4258 8.152309 TGGTTTTTCTTTTGCTTATTTCATGG 57.848 30.769 0.00 0.00 0.00 3.66
4051 4261 9.442047 TCTTTGGTTTTTCTTTTGCTTATTTCA 57.558 25.926 0.00 0.00 0.00 2.69
4056 4266 8.233868 GCTTTTCTTTGGTTTTTCTTTTGCTTA 58.766 29.630 0.00 0.00 0.00 3.09
4057 4267 7.083858 GCTTTTCTTTGGTTTTTCTTTTGCTT 58.916 30.769 0.00 0.00 0.00 3.91
4058 4268 6.206438 TGCTTTTCTTTGGTTTTTCTTTTGCT 59.794 30.769 0.00 0.00 0.00 3.91
4059 4269 6.305399 GTGCTTTTCTTTGGTTTTTCTTTTGC 59.695 34.615 0.00 0.00 0.00 3.68
4060 4270 7.358830 TGTGCTTTTCTTTGGTTTTTCTTTTG 58.641 30.769 0.00 0.00 0.00 2.44
4061 4271 7.503521 TGTGCTTTTCTTTGGTTTTTCTTTT 57.496 28.000 0.00 0.00 0.00 2.27
4062 4272 7.308529 CCTTGTGCTTTTCTTTGGTTTTTCTTT 60.309 33.333 0.00 0.00 0.00 2.52
4063 4273 6.149308 CCTTGTGCTTTTCTTTGGTTTTTCTT 59.851 34.615 0.00 0.00 0.00 2.52
4064 4274 5.643348 CCTTGTGCTTTTCTTTGGTTTTTCT 59.357 36.000 0.00 0.00 0.00 2.52
4065 4275 5.641636 TCCTTGTGCTTTTCTTTGGTTTTTC 59.358 36.000 0.00 0.00 0.00 2.29
4066 4276 5.555966 TCCTTGTGCTTTTCTTTGGTTTTT 58.444 33.333 0.00 0.00 0.00 1.94
4067 4277 5.159273 TCCTTGTGCTTTTCTTTGGTTTT 57.841 34.783 0.00 0.00 0.00 2.43
4068 4278 4.817318 TCCTTGTGCTTTTCTTTGGTTT 57.183 36.364 0.00 0.00 0.00 3.27
4069 4279 4.817318 TTCCTTGTGCTTTTCTTTGGTT 57.183 36.364 0.00 0.00 0.00 3.67
4070 4280 4.222810 AGTTTCCTTGTGCTTTTCTTTGGT 59.777 37.500 0.00 0.00 0.00 3.67
4071 4281 4.758688 AGTTTCCTTGTGCTTTTCTTTGG 58.241 39.130 0.00 0.00 0.00 3.28
4072 4282 7.826260 TTTAGTTTCCTTGTGCTTTTCTTTG 57.174 32.000 0.00 0.00 0.00 2.77
4073 4283 8.717821 GTTTTTAGTTTCCTTGTGCTTTTCTTT 58.282 29.630 0.00 0.00 0.00 2.52
4074 4284 7.333423 GGTTTTTAGTTTCCTTGTGCTTTTCTT 59.667 33.333 0.00 0.00 0.00 2.52
4075 4285 6.816640 GGTTTTTAGTTTCCTTGTGCTTTTCT 59.183 34.615 0.00 0.00 0.00 2.52
4076 4286 6.816640 AGGTTTTTAGTTTCCTTGTGCTTTTC 59.183 34.615 0.00 0.00 0.00 2.29
4077 4287 6.593770 CAGGTTTTTAGTTTCCTTGTGCTTTT 59.406 34.615 0.00 0.00 0.00 2.27
4078 4288 6.106003 CAGGTTTTTAGTTTCCTTGTGCTTT 58.894 36.000 0.00 0.00 0.00 3.51
4079 4289 5.186992 ACAGGTTTTTAGTTTCCTTGTGCTT 59.813 36.000 0.00 0.00 0.00 3.91
4080 4290 4.709886 ACAGGTTTTTAGTTTCCTTGTGCT 59.290 37.500 0.00 0.00 0.00 4.40
4081 4291 5.006153 ACAGGTTTTTAGTTTCCTTGTGC 57.994 39.130 0.00 0.00 0.00 4.57
4082 4292 7.329588 AGTACAGGTTTTTAGTTTCCTTGTG 57.670 36.000 0.00 0.00 0.00 3.33
4090 4300 9.933723 ACGTCATTATAGTACAGGTTTTTAGTT 57.066 29.630 0.00 0.00 0.00 2.24
4094 4304 8.876790 GCTTACGTCATTATAGTACAGGTTTTT 58.123 33.333 0.00 0.00 0.00 1.94
4095 4305 8.036575 TGCTTACGTCATTATAGTACAGGTTTT 58.963 33.333 0.00 0.00 0.00 2.43
4096 4306 7.549839 TGCTTACGTCATTATAGTACAGGTTT 58.450 34.615 0.00 0.00 0.00 3.27
4097 4307 7.104043 TGCTTACGTCATTATAGTACAGGTT 57.896 36.000 0.00 0.00 0.00 3.50
4098 4308 6.704289 TGCTTACGTCATTATAGTACAGGT 57.296 37.500 0.00 0.00 0.00 4.00
4099 4309 9.856488 ATTATGCTTACGTCATTATAGTACAGG 57.144 33.333 0.00 0.00 0.00 4.00
4139 4349 9.750125 GTTGGTTTTCATATTTCTTCTTCAGTT 57.250 29.630 0.00 0.00 0.00 3.16
4140 4350 8.912988 TGTTGGTTTTCATATTTCTTCTTCAGT 58.087 29.630 0.00 0.00 0.00 3.41
4141 4351 9.748708 TTGTTGGTTTTCATATTTCTTCTTCAG 57.251 29.630 0.00 0.00 0.00 3.02
4196 4406 5.348164 GTTGCTGTGTACATTCAGGTTTTT 58.652 37.500 13.61 0.00 32.94 1.94
4197 4407 4.497340 CGTTGCTGTGTACATTCAGGTTTT 60.497 41.667 13.61 0.00 32.94 2.43
4198 4408 3.003275 CGTTGCTGTGTACATTCAGGTTT 59.997 43.478 13.61 0.00 32.94 3.27
4199 4409 2.548057 CGTTGCTGTGTACATTCAGGTT 59.452 45.455 13.61 0.00 32.94 3.50
4200 4410 2.143122 CGTTGCTGTGTACATTCAGGT 58.857 47.619 13.61 0.00 32.94 4.00
4201 4411 2.412870 TCGTTGCTGTGTACATTCAGG 58.587 47.619 13.61 0.13 32.94 3.86
4202 4412 3.665323 GCTTCGTTGCTGTGTACATTCAG 60.665 47.826 8.72 8.72 35.12 3.02
4203 4413 2.223144 GCTTCGTTGCTGTGTACATTCA 59.777 45.455 0.00 0.00 0.00 2.57
4204 4414 2.223144 TGCTTCGTTGCTGTGTACATTC 59.777 45.455 0.00 0.00 0.00 2.67
4205 4415 2.032030 GTGCTTCGTTGCTGTGTACATT 60.032 45.455 0.00 0.00 0.00 2.71
4206 4416 1.531149 GTGCTTCGTTGCTGTGTACAT 59.469 47.619 0.00 0.00 0.00 2.29
4207 4417 0.934496 GTGCTTCGTTGCTGTGTACA 59.066 50.000 0.00 0.00 0.00 2.90
4208 4418 0.234884 GGTGCTTCGTTGCTGTGTAC 59.765 55.000 4.36 0.00 0.00 2.90
4209 4419 1.218875 CGGTGCTTCGTTGCTGTGTA 61.219 55.000 4.36 0.00 0.00 2.90
4210 4420 2.534019 CGGTGCTTCGTTGCTGTGT 61.534 57.895 4.36 0.00 0.00 3.72
4211 4421 2.162921 CTCGGTGCTTCGTTGCTGTG 62.163 60.000 4.36 0.00 0.00 3.66
4212 4422 1.956170 CTCGGTGCTTCGTTGCTGT 60.956 57.895 4.36 0.00 0.00 4.40
4213 4423 2.671177 CCTCGGTGCTTCGTTGCTG 61.671 63.158 4.36 0.00 0.00 4.41
4214 4424 2.357517 CCTCGGTGCTTCGTTGCT 60.358 61.111 4.36 0.00 0.00 3.91
4215 4425 1.298859 ATTCCTCGGTGCTTCGTTGC 61.299 55.000 0.00 0.00 0.00 4.17
4216 4426 0.443869 CATTCCTCGGTGCTTCGTTG 59.556 55.000 0.00 0.00 0.00 4.10
4217 4427 0.320374 TCATTCCTCGGTGCTTCGTT 59.680 50.000 0.00 0.00 0.00 3.85
4218 4428 0.320374 TTCATTCCTCGGTGCTTCGT 59.680 50.000 0.00 0.00 0.00 3.85
4219 4429 1.002366 CTTCATTCCTCGGTGCTTCG 58.998 55.000 0.00 0.00 0.00 3.79
4220 4430 1.066143 TCCTTCATTCCTCGGTGCTTC 60.066 52.381 0.00 0.00 0.00 3.86
4221 4431 0.984230 TCCTTCATTCCTCGGTGCTT 59.016 50.000 0.00 0.00 0.00 3.91
4222 4432 0.984230 TTCCTTCATTCCTCGGTGCT 59.016 50.000 0.00 0.00 0.00 4.40
4223 4433 1.468914 GTTTCCTTCATTCCTCGGTGC 59.531 52.381 0.00 0.00 0.00 5.01
4224 4434 2.778299 TGTTTCCTTCATTCCTCGGTG 58.222 47.619 0.00 0.00 0.00 4.94
4225 4435 3.181443 ACTTGTTTCCTTCATTCCTCGGT 60.181 43.478 0.00 0.00 0.00 4.69
4226 4436 3.412386 ACTTGTTTCCTTCATTCCTCGG 58.588 45.455 0.00 0.00 0.00 4.63
4227 4437 4.093556 GCTACTTGTTTCCTTCATTCCTCG 59.906 45.833 0.00 0.00 0.00 4.63
4228 4438 5.003804 TGCTACTTGTTTCCTTCATTCCTC 58.996 41.667 0.00 0.00 0.00 3.71
4229 4439 4.762251 GTGCTACTTGTTTCCTTCATTCCT 59.238 41.667 0.00 0.00 0.00 3.36
4230 4440 4.518970 TGTGCTACTTGTTTCCTTCATTCC 59.481 41.667 0.00 0.00 0.00 3.01
4231 4441 5.452777 GTGTGCTACTTGTTTCCTTCATTC 58.547 41.667 0.00 0.00 0.00 2.67
4232 4442 4.278419 GGTGTGCTACTTGTTTCCTTCATT 59.722 41.667 0.00 0.00 0.00 2.57
4233 4443 3.821033 GGTGTGCTACTTGTTTCCTTCAT 59.179 43.478 0.00 0.00 0.00 2.57
4234 4444 3.211045 GGTGTGCTACTTGTTTCCTTCA 58.789 45.455 0.00 0.00 0.00 3.02
4235 4445 3.211045 TGGTGTGCTACTTGTTTCCTTC 58.789 45.455 0.00 0.00 0.00 3.46
4236 4446 3.290948 TGGTGTGCTACTTGTTTCCTT 57.709 42.857 0.00 0.00 0.00 3.36
4237 4447 3.508845 ATGGTGTGCTACTTGTTTCCT 57.491 42.857 0.00 0.00 0.00 3.36
4238 4448 3.305335 CCAATGGTGTGCTACTTGTTTCC 60.305 47.826 0.00 0.00 0.00 3.13
4239 4449 3.305335 CCCAATGGTGTGCTACTTGTTTC 60.305 47.826 0.00 0.00 0.00 2.78
4240 4450 2.627699 CCCAATGGTGTGCTACTTGTTT 59.372 45.455 0.00 0.00 0.00 2.83
4241 4451 2.238521 CCCAATGGTGTGCTACTTGTT 58.761 47.619 0.00 0.00 0.00 2.83
4242 4452 1.909700 CCCAATGGTGTGCTACTTGT 58.090 50.000 0.00 0.00 0.00 3.16
4243 4453 0.527565 GCCCAATGGTGTGCTACTTG 59.472 55.000 0.00 0.00 0.00 3.16
4244 4454 0.611896 GGCCCAATGGTGTGCTACTT 60.612 55.000 0.00 0.00 0.00 2.24
4245 4455 1.000896 GGCCCAATGGTGTGCTACT 60.001 57.895 0.00 0.00 0.00 2.57
4246 4456 2.406616 CGGCCCAATGGTGTGCTAC 61.407 63.158 0.00 0.00 0.00 3.58
4247 4457 2.045438 CGGCCCAATGGTGTGCTA 60.045 61.111 0.00 0.00 0.00 3.49
4266 4476 1.283793 CACAGAAAGCGCTTGTGGG 59.716 57.895 26.01 22.08 32.54 4.61
4267 4477 1.283793 CCACAGAAAGCGCTTGTGG 59.716 57.895 33.70 33.70 43.06 4.17
4268 4478 0.236711 CTCCACAGAAAGCGCTTGTG 59.763 55.000 26.51 26.51 34.46 3.33
4269 4479 0.886490 CCTCCACAGAAAGCGCTTGT 60.886 55.000 25.80 15.99 0.00 3.16
4270 4480 0.603707 TCCTCCACAGAAAGCGCTTG 60.604 55.000 25.80 15.23 0.00 4.01
4271 4481 0.108585 TTCCTCCACAGAAAGCGCTT 59.891 50.000 18.98 18.98 0.00 4.68
4272 4482 0.108585 TTTCCTCCACAGAAAGCGCT 59.891 50.000 2.64 2.64 0.00 5.92
4273 4483 0.951558 TTTTCCTCCACAGAAAGCGC 59.048 50.000 0.00 0.00 34.84 5.92
4274 4484 2.222027 AGTTTTCCTCCACAGAAAGCG 58.778 47.619 0.00 0.00 38.86 4.68
4275 4485 3.632145 TGAAGTTTTCCTCCACAGAAAGC 59.368 43.478 0.00 0.00 34.84 3.51
4276 4486 5.334414 CGATGAAGTTTTCCTCCACAGAAAG 60.334 44.000 0.00 0.00 34.84 2.62
4277 4487 4.515191 CGATGAAGTTTTCCTCCACAGAAA 59.485 41.667 0.00 0.00 0.00 2.52
4278 4488 4.065088 CGATGAAGTTTTCCTCCACAGAA 58.935 43.478 0.00 0.00 0.00 3.02
4279 4489 3.323691 TCGATGAAGTTTTCCTCCACAGA 59.676 43.478 0.00 0.00 0.00 3.41
4280 4490 3.433615 GTCGATGAAGTTTTCCTCCACAG 59.566 47.826 0.00 0.00 0.00 3.66
4281 4491 3.399330 GTCGATGAAGTTTTCCTCCACA 58.601 45.455 0.00 0.00 0.00 4.17
4282 4492 2.412089 CGTCGATGAAGTTTTCCTCCAC 59.588 50.000 0.00 0.00 0.00 4.02
4283 4493 2.297880 TCGTCGATGAAGTTTTCCTCCA 59.702 45.455 4.45 0.00 0.00 3.86
4284 4494 2.955614 TCGTCGATGAAGTTTTCCTCC 58.044 47.619 4.45 0.00 0.00 4.30
4285 4495 3.242123 GCATCGTCGATGAAGTTTTCCTC 60.242 47.826 33.73 11.88 42.09 3.71
4286 4496 2.673368 GCATCGTCGATGAAGTTTTCCT 59.327 45.455 33.73 0.00 42.09 3.36
4287 4497 2.673368 AGCATCGTCGATGAAGTTTTCC 59.327 45.455 33.73 16.06 42.09 3.13
4288 4498 3.999229 AGCATCGTCGATGAAGTTTTC 57.001 42.857 33.73 16.71 42.09 2.29
4289 4499 4.495422 ACTAGCATCGTCGATGAAGTTTT 58.505 39.130 33.73 14.09 42.09 2.43
4290 4500 4.106197 GACTAGCATCGTCGATGAAGTTT 58.894 43.478 33.73 16.69 42.09 2.66
4291 4501 3.378742 AGACTAGCATCGTCGATGAAGTT 59.621 43.478 33.73 21.33 42.09 2.66
4292 4502 2.946329 AGACTAGCATCGTCGATGAAGT 59.054 45.455 33.73 31.02 42.09 3.01
4293 4503 3.002759 TGAGACTAGCATCGTCGATGAAG 59.997 47.826 33.73 28.64 42.09 3.02
4294 4504 2.943033 TGAGACTAGCATCGTCGATGAA 59.057 45.455 33.73 20.91 42.09 2.57
4295 4505 2.288186 GTGAGACTAGCATCGTCGATGA 59.712 50.000 33.73 16.26 42.09 2.92
4296 4506 2.289274 AGTGAGACTAGCATCGTCGATG 59.711 50.000 27.22 27.22 42.37 3.84
4297 4507 2.566913 AGTGAGACTAGCATCGTCGAT 58.433 47.619 0.75 0.75 36.53 3.59
4298 4508 2.025589 AGTGAGACTAGCATCGTCGA 57.974 50.000 0.00 0.00 36.53 4.20
4299 4509 5.593183 TTATAGTGAGACTAGCATCGTCG 57.407 43.478 0.00 0.00 33.66 5.12
4300 4510 5.180492 AGCTTATAGTGAGACTAGCATCGTC 59.820 44.000 0.00 0.00 33.66 4.20
4301 4511 5.067273 AGCTTATAGTGAGACTAGCATCGT 58.933 41.667 0.00 0.00 33.66 3.73
4302 4512 5.621197 AGCTTATAGTGAGACTAGCATCG 57.379 43.478 0.00 0.00 33.66 3.84
4303 4513 7.389330 TGTCTAGCTTATAGTGAGACTAGCATC 59.611 40.741 10.93 0.00 37.89 3.91
4304 4514 7.227873 TGTCTAGCTTATAGTGAGACTAGCAT 58.772 38.462 10.93 0.00 37.89 3.79
4305 4515 6.592870 TGTCTAGCTTATAGTGAGACTAGCA 58.407 40.000 10.93 0.00 37.89 3.49
4306 4516 7.681939 ATGTCTAGCTTATAGTGAGACTAGC 57.318 40.000 10.93 0.00 37.89 3.42
4309 4519 8.519526 GCATTATGTCTAGCTTATAGTGAGACT 58.480 37.037 10.93 0.00 37.89 3.24
4310 4520 8.300286 TGCATTATGTCTAGCTTATAGTGAGAC 58.700 37.037 0.00 0.00 37.61 3.36
4311 4521 8.409358 TGCATTATGTCTAGCTTATAGTGAGA 57.591 34.615 0.00 0.00 0.00 3.27
4314 4524 9.860898 TGTATGCATTATGTCTAGCTTATAGTG 57.139 33.333 3.54 0.00 0.00 2.74
4320 4530 9.123902 TCATTTTGTATGCATTATGTCTAGCTT 57.876 29.630 3.54 0.00 0.00 3.74
4321 4531 8.681486 TCATTTTGTATGCATTATGTCTAGCT 57.319 30.769 3.54 0.00 0.00 3.32
4322 4532 9.903682 AATCATTTTGTATGCATTATGTCTAGC 57.096 29.630 3.54 0.00 0.00 3.42
4332 4542 9.800433 TCGTAATTTGAATCATTTTGTATGCAT 57.200 25.926 3.79 3.79 0.00 3.96
4333 4543 9.631452 TTCGTAATTTGAATCATTTTGTATGCA 57.369 25.926 0.00 0.00 0.00 3.96
4338 4548 9.743057 TCAGTTTCGTAATTTGAATCATTTTGT 57.257 25.926 0.00 0.00 0.00 2.83
4348 4558 8.656849 GCTTCTCTATTCAGTTTCGTAATTTGA 58.343 33.333 0.00 0.00 0.00 2.69
4349 4559 8.443160 TGCTTCTCTATTCAGTTTCGTAATTTG 58.557 33.333 0.00 0.00 0.00 2.32
4350 4560 8.547967 TGCTTCTCTATTCAGTTTCGTAATTT 57.452 30.769 0.00 0.00 0.00 1.82
4351 4561 8.607459 CATGCTTCTCTATTCAGTTTCGTAATT 58.393 33.333 0.00 0.00 0.00 1.40
4352 4562 7.225538 CCATGCTTCTCTATTCAGTTTCGTAAT 59.774 37.037 0.00 0.00 0.00 1.89
4353 4563 6.535150 CCATGCTTCTCTATTCAGTTTCGTAA 59.465 38.462 0.00 0.00 0.00 3.18
4354 4564 6.042777 CCATGCTTCTCTATTCAGTTTCGTA 58.957 40.000 0.00 0.00 0.00 3.43
4355 4565 4.872691 CCATGCTTCTCTATTCAGTTTCGT 59.127 41.667 0.00 0.00 0.00 3.85
4356 4566 4.260538 GCCATGCTTCTCTATTCAGTTTCG 60.261 45.833 0.00 0.00 0.00 3.46
4357 4567 4.880696 AGCCATGCTTCTCTATTCAGTTTC 59.119 41.667 0.00 0.00 33.89 2.78
4358 4568 4.639310 CAGCCATGCTTCTCTATTCAGTTT 59.361 41.667 0.00 0.00 36.40 2.66
4359 4569 4.197750 CAGCCATGCTTCTCTATTCAGTT 58.802 43.478 0.00 0.00 36.40 3.16
4360 4570 3.433314 CCAGCCATGCTTCTCTATTCAGT 60.433 47.826 0.00 0.00 36.40 3.41
4361 4571 3.139850 CCAGCCATGCTTCTCTATTCAG 58.860 50.000 0.00 0.00 36.40 3.02
4362 4572 2.773661 TCCAGCCATGCTTCTCTATTCA 59.226 45.455 0.00 0.00 36.40 2.57
4363 4573 3.482156 TCCAGCCATGCTTCTCTATTC 57.518 47.619 0.00 0.00 36.40 1.75
4364 4574 3.393609 TCATCCAGCCATGCTTCTCTATT 59.606 43.478 0.00 0.00 36.40 1.73
4365 4575 2.977580 TCATCCAGCCATGCTTCTCTAT 59.022 45.455 0.00 0.00 36.40 1.98
4366 4576 2.401568 TCATCCAGCCATGCTTCTCTA 58.598 47.619 0.00 0.00 36.40 2.43
4367 4577 1.210538 TCATCCAGCCATGCTTCTCT 58.789 50.000 0.00 0.00 36.40 3.10
4368 4578 1.674962 GTTCATCCAGCCATGCTTCTC 59.325 52.381 0.00 0.00 36.40 2.87
4369 4579 1.005097 TGTTCATCCAGCCATGCTTCT 59.995 47.619 0.00 0.00 36.40 2.85
4370 4580 1.466856 TGTTCATCCAGCCATGCTTC 58.533 50.000 0.00 0.00 36.40 3.86
4371 4581 1.822990 CTTGTTCATCCAGCCATGCTT 59.177 47.619 0.00 0.00 36.40 3.91
4372 4582 1.005097 TCTTGTTCATCCAGCCATGCT 59.995 47.619 0.00 0.00 40.77 3.79
4373 4583 1.404391 CTCTTGTTCATCCAGCCATGC 59.596 52.381 0.00 0.00 0.00 4.06
4374 4584 2.022195 CCTCTTGTTCATCCAGCCATG 58.978 52.381 0.00 0.00 0.00 3.66
4375 4585 1.064166 CCCTCTTGTTCATCCAGCCAT 60.064 52.381 0.00 0.00 0.00 4.40
4376 4586 0.329261 CCCTCTTGTTCATCCAGCCA 59.671 55.000 0.00 0.00 0.00 4.75
4377 4587 0.394899 CCCCTCTTGTTCATCCAGCC 60.395 60.000 0.00 0.00 0.00 4.85
4378 4588 0.620556 TCCCCTCTTGTTCATCCAGC 59.379 55.000 0.00 0.00 0.00 4.85
4379 4589 1.630369 TGTCCCCTCTTGTTCATCCAG 59.370 52.381 0.00 0.00 0.00 3.86
4380 4590 1.741028 TGTCCCCTCTTGTTCATCCA 58.259 50.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.