Multiple sequence alignment - TraesCS1B01G029400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G029400 chr1B 100.000 3070 0 0 1 3070 14188915 14185846 0.000000e+00 5670.0
1 TraesCS1B01G029400 chr1B 91.672 1585 76 21 433 1990 14693088 14691533 0.000000e+00 2145.0
2 TraesCS1B01G029400 chr1B 88.985 581 55 5 2488 3068 14690026 14689455 0.000000e+00 710.0
3 TraesCS1B01G029400 chr1B 89.583 336 24 7 680 1015 14811582 14811258 1.700000e-112 416.0
4 TraesCS1B01G029400 chr1B 84.677 372 52 5 2702 3070 56324305 56324674 1.740000e-97 366.0
5 TraesCS1B01G029400 chr1B 85.075 335 41 8 45 374 69233032 69233362 1.760000e-87 333.0
6 TraesCS1B01G029400 chr1B 86.139 202 15 5 1486 1687 14172438 14172250 4.010000e-49 206.0
7 TraesCS1B01G029400 chr1B 86.250 160 14 3 1553 1705 14804386 14804228 1.890000e-37 167.0
8 TraesCS1B01G029400 chr1B 89.535 86 9 0 2629 2714 14186214 14186129 3.240000e-20 110.0
9 TraesCS1B01G029400 chr1A 90.372 1641 102 14 547 2147 11645171 11643547 0.000000e+00 2104.0
10 TraesCS1B01G029400 chr1A 90.774 336 29 2 2735 3070 11641448 11641115 6.040000e-122 448.0
11 TraesCS1B01G029400 chr1A 84.091 440 54 12 1 428 517816858 517816423 7.920000e-111 411.0
12 TraesCS1B01G029400 chr1A 82.998 447 55 12 1 428 30499245 30498801 4.800000e-103 385.0
13 TraesCS1B01G029400 chr1A 89.180 305 25 4 2432 2729 11643173 11642870 1.040000e-99 374.0
14 TraesCS1B01G029400 chr1A 90.404 198 16 2 1944 2138 11643379 11643182 1.090000e-64 257.0
15 TraesCS1B01G029400 chr1A 84.577 201 20 3 1487 1687 11639636 11639447 4.040000e-44 189.0
16 TraesCS1B01G029400 chr1D 93.042 1121 54 15 858 1969 9863507 9862402 0.000000e+00 1616.0
17 TraesCS1B01G029400 chr1D 88.743 764 55 8 2316 3070 9862215 9861474 0.000000e+00 905.0
18 TraesCS1B01G029400 chr1D 86.825 463 30 11 433 876 9863976 9863526 3.560000e-134 488.0
19 TraesCS1B01G029400 chr1D 92.079 202 16 0 1486 1687 9860014 9859813 5.010000e-73 285.0
20 TraesCS1B01G029400 chr3A 86.574 432 54 4 1 430 247741378 247741807 9.960000e-130 473.0
21 TraesCS1B01G029400 chr3A 83.511 376 58 4 1 374 36703871 36704244 6.300000e-92 348.0
22 TraesCS1B01G029400 chr3A 82.353 425 39 13 26 428 16242404 16242814 1.360000e-88 337.0
23 TraesCS1B01G029400 chr3A 88.417 259 27 2 171 428 34921128 34921384 2.970000e-80 309.0
24 TraesCS1B01G029400 chr3B 84.233 463 34 16 1 431 735077236 735076781 6.120000e-112 414.0
25 TraesCS1B01G029400 chr3B 86.207 348 46 2 2723 3070 658461409 658461064 2.890000e-100 375.0
26 TraesCS1B01G029400 chr3B 83.495 206 24 9 2237 2433 742459172 742459376 1.880000e-42 183.0
27 TraesCS1B01G029400 chr2A 87.755 343 33 8 2732 3070 682973945 682973608 2.870000e-105 392.0
28 TraesCS1B01G029400 chr2A 81.481 351 58 7 27 374 459121560 459121214 6.480000e-72 281.0
29 TraesCS1B01G029400 chr2A 87.500 64 8 0 2650 2713 406974872 406974935 1.180000e-09 75.0
30 TraesCS1B01G029400 chr2A 87.500 64 8 0 2650 2713 407103627 407103690 1.180000e-09 75.0
31 TraesCS1B01G029400 chr3D 87.069 348 42 3 2723 3070 497858260 497857916 1.030000e-104 390.0
32 TraesCS1B01G029400 chr3D 87.455 279 30 2 2145 2422 501057205 501057479 1.780000e-82 316.0
33 TraesCS1B01G029400 chr4A 86.994 346 44 1 2723 3068 17231749 17232093 3.710000e-104 388.0
34 TraesCS1B01G029400 chr6D 86.286 350 39 7 2723 3070 460458002 460458344 3.740000e-99 372.0
35 TraesCS1B01G029400 chr6D 85.113 309 30 3 135 428 12300239 12300546 4.970000e-78 302.0
36 TraesCS1B01G029400 chr6D 82.840 169 20 3 2148 2315 58046296 58046456 3.190000e-30 143.0
37 TraesCS1B01G029400 chr2D 89.510 286 29 1 2148 2432 401774000 401774285 8.090000e-96 361.0
38 TraesCS1B01G029400 chr2D 89.273 289 28 2 2145 2432 296251827 296252113 2.910000e-95 359.0
39 TraesCS1B01G029400 chrUn 89.510 286 26 2 2148 2432 729157 729439 2.910000e-95 359.0
40 TraesCS1B01G029400 chrUn 89.510 286 26 2 2148 2432 229397810 229397528 2.910000e-95 359.0
41 TraesCS1B01G029400 chr6B 84.367 371 49 9 3 368 626460029 626460395 3.770000e-94 355.0
42 TraesCS1B01G029400 chr7B 88.055 293 34 1 2142 2433 419284875 419285167 2.270000e-91 346.0
43 TraesCS1B01G029400 chr2B 88.462 286 30 2 2148 2432 366444417 366444134 2.930000e-90 342.0
44 TraesCS1B01G029400 chr7A 82.447 376 61 5 1 374 18320267 18319895 1.060000e-84 324.0
45 TraesCS1B01G029400 chr7A 88.950 181 19 1 249 429 67289167 67289346 3.980000e-54 222.0
46 TraesCS1B01G029400 chr6A 80.926 367 63 7 11 374 156773942 156774304 1.800000e-72 283.0
47 TraesCS1B01G029400 chr6A 76.344 465 64 28 11 433 591245723 591245263 1.120000e-49 207.0
48 TraesCS1B01G029400 chr5D 85.455 275 23 8 171 428 55067662 55067388 1.400000e-68 270.0
49 TraesCS1B01G029400 chr7D 84.926 272 24 6 175 429 151836883 151837154 3.040000e-65 259.0
50 TraesCS1B01G029400 chr5A 94.872 39 1 1 2620 2657 682893423 682893385 3.310000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G029400 chr1B 14185846 14188915 3069 True 2890.0 5670 94.76750 1 3070 2 chr1B.!!$R4 3069
1 TraesCS1B01G029400 chr1B 14689455 14693088 3633 True 1427.5 2145 90.32850 433 3068 2 chr1B.!!$R5 2635
2 TraesCS1B01G029400 chr1A 11639447 11645171 5724 True 674.4 2104 89.06140 547 3070 5 chr1A.!!$R3 2523
3 TraesCS1B01G029400 chr1D 9859813 9863976 4163 True 823.5 1616 90.17225 433 3070 4 chr1D.!!$R1 2637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 154 0.039074 CGTCGGCATAGATCTCCACC 60.039 60.0 0.0 0.0 0.0 4.61 F
163 164 0.039074 GATCTCCACCTATGCCGACG 60.039 60.0 0.0 0.0 0.0 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1432 1546 0.039978 GTCCGCATCGATCGATCAGT 60.040 55.0 27.2 5.27 31.62 3.41 R
2158 3946 0.396811 GCCCGCTTATGTCACCCTAT 59.603 55.0 0.0 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.049393 GCAAGCCTATGCCTACGG 57.951 61.111 0.00 0.00 40.49 4.02
22 23 1.146263 GCAAGCCTATGCCTACGGT 59.854 57.895 0.00 0.00 40.49 4.83
23 24 0.391597 GCAAGCCTATGCCTACGGTA 59.608 55.000 0.00 0.00 40.49 4.02
24 25 1.202604 GCAAGCCTATGCCTACGGTAA 60.203 52.381 0.00 0.00 40.49 2.85
25 26 2.743838 GCAAGCCTATGCCTACGGTAAA 60.744 50.000 0.00 0.00 40.49 2.01
26 27 3.131396 CAAGCCTATGCCTACGGTAAAG 58.869 50.000 0.00 0.00 38.69 1.85
27 28 1.070289 AGCCTATGCCTACGGTAAAGC 59.930 52.381 3.53 3.53 38.69 3.51
28 29 1.876837 GCCTATGCCTACGGTAAAGCC 60.877 57.143 7.22 0.00 0.00 4.35
47 48 2.754472 CCGTCGGCATAGATTTCATCA 58.246 47.619 0.00 0.00 0.00 3.07
48 49 3.130633 CCGTCGGCATAGATTTCATCAA 58.869 45.455 0.00 0.00 0.00 2.57
49 50 3.748048 CCGTCGGCATAGATTTCATCAAT 59.252 43.478 0.00 0.00 0.00 2.57
50 51 4.377738 CCGTCGGCATAGATTTCATCAATG 60.378 45.833 0.00 0.00 0.00 2.82
51 52 4.470462 GTCGGCATAGATTTCATCAATGC 58.530 43.478 0.00 0.00 0.00 3.56
52 53 3.503363 TCGGCATAGATTTCATCAATGCC 59.497 43.478 13.35 13.35 46.80 4.40
55 56 5.947443 GGCATAGATTTCATCAATGCCTAC 58.053 41.667 15.54 0.00 46.75 3.18
56 57 5.391310 GGCATAGATTTCATCAATGCCTACG 60.391 44.000 15.54 0.00 46.75 3.51
57 58 5.391310 GCATAGATTTCATCAATGCCTACGG 60.391 44.000 0.00 0.00 0.00 4.02
86 87 2.112718 GCATAGCCCTGCCTCCAG 59.887 66.667 0.00 0.00 36.10 3.86
97 98 4.087892 CCTCCAGGAGGCACCACG 62.088 72.222 23.54 0.00 43.29 4.94
98 99 4.087892 CTCCAGGAGGCACCACGG 62.088 72.222 8.88 3.35 42.04 4.94
101 102 3.636231 CAGGAGGCACCACGGGAA 61.636 66.667 3.18 0.00 42.04 3.97
102 103 3.322466 AGGAGGCACCACGGGAAG 61.322 66.667 3.18 0.00 42.04 3.46
108 109 4.619227 CACCACGGGAAGCCACGT 62.619 66.667 0.00 0.00 45.25 4.49
120 121 4.412933 CCACGTGGCGTAGGTATG 57.587 61.111 24.02 0.00 38.32 2.39
121 122 1.881252 CCACGTGGCGTAGGTATGC 60.881 63.158 24.02 0.00 38.32 3.14
144 145 4.946411 GCCTAGTCGTCGGCATAG 57.054 61.111 0.00 0.00 45.59 2.23
145 146 2.328235 GCCTAGTCGTCGGCATAGA 58.672 57.895 0.00 0.00 45.59 1.98
146 147 0.882474 GCCTAGTCGTCGGCATAGAT 59.118 55.000 0.00 0.00 45.59 1.98
147 148 1.135632 GCCTAGTCGTCGGCATAGATC 60.136 57.143 0.00 0.00 45.59 2.75
148 149 2.428491 CCTAGTCGTCGGCATAGATCT 58.572 52.381 0.00 0.00 0.00 2.75
149 150 2.417239 CCTAGTCGTCGGCATAGATCTC 59.583 54.545 0.00 0.00 0.00 2.75
150 151 1.240256 AGTCGTCGGCATAGATCTCC 58.760 55.000 0.00 0.00 0.00 3.71
151 152 0.952280 GTCGTCGGCATAGATCTCCA 59.048 55.000 0.00 0.00 0.00 3.86
152 153 0.952280 TCGTCGGCATAGATCTCCAC 59.048 55.000 0.00 0.00 0.00 4.02
153 154 0.039074 CGTCGGCATAGATCTCCACC 60.039 60.000 0.00 0.00 0.00 4.61
154 155 1.333177 GTCGGCATAGATCTCCACCT 58.667 55.000 0.00 0.00 0.00 4.00
155 156 2.515854 GTCGGCATAGATCTCCACCTA 58.484 52.381 0.00 0.00 0.00 3.08
156 157 3.093057 GTCGGCATAGATCTCCACCTAT 58.907 50.000 0.00 0.00 0.00 2.57
157 158 3.092301 TCGGCATAGATCTCCACCTATG 58.908 50.000 0.00 0.00 42.99 2.23
160 161 3.516981 CATAGATCTCCACCTATGCCG 57.483 52.381 0.00 0.00 36.81 5.69
161 162 2.971901 TAGATCTCCACCTATGCCGA 57.028 50.000 0.00 0.00 0.00 5.54
162 163 1.333177 AGATCTCCACCTATGCCGAC 58.667 55.000 0.00 0.00 0.00 4.79
163 164 0.039074 GATCTCCACCTATGCCGACG 60.039 60.000 0.00 0.00 0.00 5.12
164 165 1.464376 ATCTCCACCTATGCCGACGG 61.464 60.000 10.29 10.29 0.00 4.79
180 181 2.185867 GGCTTGACCGTCGGCATA 59.814 61.111 12.28 0.00 0.00 3.14
181 182 2.171725 GGCTTGACCGTCGGCATAC 61.172 63.158 12.28 5.69 0.00 2.39
182 183 2.171725 GCTTGACCGTCGGCATACC 61.172 63.158 12.28 0.00 0.00 2.73
183 184 1.515954 CTTGACCGTCGGCATACCT 59.484 57.895 12.28 0.00 0.00 3.08
184 185 0.742505 CTTGACCGTCGGCATACCTA 59.257 55.000 12.28 0.00 0.00 3.08
185 186 1.340248 CTTGACCGTCGGCATACCTAT 59.660 52.381 12.28 0.00 0.00 2.57
186 187 0.671796 TGACCGTCGGCATACCTATG 59.328 55.000 12.28 0.00 36.78 2.23
210 211 1.972872 ATGGCTTCCCGTGATTCATC 58.027 50.000 0.00 0.00 0.00 2.92
211 212 0.461870 TGGCTTCCCGTGATTCATCG 60.462 55.000 0.00 0.00 0.00 3.84
212 213 1.160329 GGCTTCCCGTGATTCATCGG 61.160 60.000 16.10 16.10 45.42 4.18
213 214 1.776034 GCTTCCCGTGATTCATCGGC 61.776 60.000 17.07 6.87 44.63 5.54
214 215 1.490693 CTTCCCGTGATTCATCGGCG 61.491 60.000 17.07 0.00 44.63 6.46
215 216 3.640000 CCCGTGATTCATCGGCGC 61.640 66.667 17.07 0.00 44.63 6.53
216 217 2.586079 CCGTGATTCATCGGCGCT 60.586 61.111 7.64 0.00 40.28 5.92
217 218 2.173669 CCGTGATTCATCGGCGCTT 61.174 57.895 7.64 0.00 40.28 4.68
218 219 1.705337 CCGTGATTCATCGGCGCTTT 61.705 55.000 7.64 0.00 40.28 3.51
219 220 0.096976 CGTGATTCATCGGCGCTTTT 59.903 50.000 7.64 0.00 0.00 2.27
220 221 1.538276 GTGATTCATCGGCGCTTTTG 58.462 50.000 7.64 2.22 0.00 2.44
221 222 1.130373 GTGATTCATCGGCGCTTTTGA 59.870 47.619 7.64 4.90 0.00 2.69
222 223 1.130373 TGATTCATCGGCGCTTTTGAC 59.870 47.619 7.64 0.00 0.00 3.18
223 224 1.130373 GATTCATCGGCGCTTTTGACA 59.870 47.619 7.64 0.23 0.00 3.58
224 225 0.516877 TTCATCGGCGCTTTTGACAG 59.483 50.000 7.64 0.00 0.00 3.51
225 226 1.512734 CATCGGCGCTTTTGACAGC 60.513 57.895 7.64 0.00 36.33 4.40
231 232 2.127232 GCTTTTGACAGCGCCGTC 60.127 61.111 16.89 16.89 36.40 4.79
232 233 2.556287 CTTTTGACAGCGCCGTCC 59.444 61.111 20.53 3.99 34.88 4.79
233 234 3.295228 CTTTTGACAGCGCCGTCCG 62.295 63.158 20.53 3.54 40.75 4.79
234 235 4.595538 TTTGACAGCGCCGTCCGT 62.596 61.111 20.53 2.46 39.71 4.69
235 236 4.595538 TTGACAGCGCCGTCCGTT 62.596 61.111 20.53 0.00 39.71 4.44
242 243 4.986587 CGCCGTCCGTTGTCGTCA 62.987 66.667 0.00 0.00 35.01 4.35
243 244 3.103911 GCCGTCCGTTGTCGTCAG 61.104 66.667 0.00 0.00 35.01 3.51
244 245 3.103911 CCGTCCGTTGTCGTCAGC 61.104 66.667 0.00 0.00 35.01 4.26
245 246 3.103911 CGTCCGTTGTCGTCAGCC 61.104 66.667 0.00 0.00 35.01 4.85
246 247 3.103911 GTCCGTTGTCGTCAGCCG 61.104 66.667 0.00 0.00 38.13 5.52
247 248 3.289062 TCCGTTGTCGTCAGCCGA 61.289 61.111 5.63 0.00 45.00 5.54
257 258 1.730064 TCGTCAGCCGAAAAATACTGC 59.270 47.619 0.00 0.00 44.03 4.40
258 259 1.202031 CGTCAGCCGAAAAATACTGCC 60.202 52.381 0.00 0.00 39.56 4.85
259 260 1.083489 TCAGCCGAAAAATACTGCCG 58.917 50.000 0.00 0.00 0.00 5.69
260 261 1.083489 CAGCCGAAAAATACTGCCGA 58.917 50.000 0.00 0.00 0.00 5.54
261 262 1.084289 AGCCGAAAAATACTGCCGAC 58.916 50.000 0.00 0.00 0.00 4.79
262 263 0.247537 GCCGAAAAATACTGCCGACG 60.248 55.000 0.00 0.00 0.00 5.12
263 264 0.372334 CCGAAAAATACTGCCGACGG 59.628 55.000 10.29 10.29 0.00 4.79
292 293 2.838225 CCGTCGGCATAGGGTCCT 60.838 66.667 0.00 0.00 0.00 3.85
293 294 1.529948 CCGTCGGCATAGGGTCCTA 60.530 63.158 0.00 0.00 0.00 2.94
294 295 0.898789 CCGTCGGCATAGGGTCCTAT 60.899 60.000 0.00 3.79 39.60 2.57
301 302 0.243907 CATAGGGTCCTATGCCGACG 59.756 60.000 20.21 0.92 46.03 5.12
302 303 0.898789 ATAGGGTCCTATGCCGACGG 60.899 60.000 10.29 10.29 37.80 4.79
313 314 3.841222 CCGACGGCAAAACAATGC 58.159 55.556 0.00 0.00 45.67 3.56
319 320 3.841222 GCAAAACAATGCCGACGG 58.159 55.556 10.29 10.29 40.49 4.79
320 321 1.007849 GCAAAACAATGCCGACGGT 60.008 52.632 16.73 0.00 40.49 4.83
321 322 1.001745 GCAAAACAATGCCGACGGTC 61.002 55.000 16.73 8.54 40.49 4.79
322 323 0.591170 CAAAACAATGCCGACGGTCT 59.409 50.000 16.73 0.00 0.00 3.85
323 324 0.591170 AAAACAATGCCGACGGTCTG 59.409 50.000 16.73 12.48 0.00 3.51
324 325 0.250124 AAACAATGCCGACGGTCTGA 60.250 50.000 16.73 0.00 0.00 3.27
325 326 0.949105 AACAATGCCGACGGTCTGAC 60.949 55.000 16.73 0.00 0.00 3.51
326 327 1.374125 CAATGCCGACGGTCTGACA 60.374 57.895 16.73 4.55 0.00 3.58
327 328 0.948623 CAATGCCGACGGTCTGACAA 60.949 55.000 16.73 0.00 0.00 3.18
328 329 0.670546 AATGCCGACGGTCTGACAAG 60.671 55.000 16.73 5.60 0.00 3.16
329 330 1.532604 ATGCCGACGGTCTGACAAGA 61.533 55.000 16.73 0.00 0.00 3.02
339 340 2.991434 TCTGACAAGACTACGCTGAC 57.009 50.000 0.00 0.00 0.00 3.51
356 357 2.352001 CGTGATCTACGCCGACGG 60.352 66.667 10.29 10.29 46.92 4.79
357 358 2.025727 GTGATCTACGCCGACGGG 59.974 66.667 17.22 8.43 46.04 5.28
358 359 2.438975 TGATCTACGCCGACGGGT 60.439 61.111 17.22 14.07 46.04 5.28
359 360 2.330745 GATCTACGCCGACGGGTC 59.669 66.667 17.22 0.00 46.04 4.46
360 361 2.124403 ATCTACGCCGACGGGTCT 60.124 61.111 17.22 0.00 46.04 3.85
361 362 0.882042 GATCTACGCCGACGGGTCTA 60.882 60.000 17.22 4.38 46.04 2.59
362 363 0.250640 ATCTACGCCGACGGGTCTAT 60.251 55.000 17.22 6.39 46.04 1.98
363 364 1.162181 TCTACGCCGACGGGTCTATG 61.162 60.000 17.22 4.26 46.04 2.23
364 365 2.728427 CTACGCCGACGGGTCTATGC 62.728 65.000 17.22 0.00 46.04 3.14
365 366 4.944372 CGCCGACGGGTCTATGCC 62.944 72.222 17.22 0.00 34.97 4.40
366 367 4.944372 GCCGACGGGTCTATGCCG 62.944 72.222 17.22 0.00 34.97 5.69
367 368 3.214123 CCGACGGGTCTATGCCGA 61.214 66.667 5.81 0.00 0.00 5.54
368 369 2.025727 CGACGGGTCTATGCCGAC 59.974 66.667 0.00 0.00 0.00 4.79
369 370 2.025727 GACGGGTCTATGCCGACG 59.974 66.667 0.00 0.00 34.75 5.12
370 371 2.438975 ACGGGTCTATGCCGACGA 60.439 61.111 0.00 0.00 34.75 4.20
371 372 2.025727 CGGGTCTATGCCGACGAC 59.974 66.667 0.00 0.00 34.75 4.34
372 373 2.767445 CGGGTCTATGCCGACGACA 61.767 63.158 0.00 0.00 34.75 4.35
373 374 1.065928 GGGTCTATGCCGACGACAG 59.934 63.158 0.00 0.00 34.75 3.51
374 375 1.381928 GGGTCTATGCCGACGACAGA 61.382 60.000 0.00 0.00 34.75 3.41
375 376 0.669077 GGTCTATGCCGACGACAGAT 59.331 55.000 0.00 0.00 34.75 2.90
376 377 1.600663 GGTCTATGCCGACGACAGATG 60.601 57.143 0.00 0.00 34.75 2.90
377 378 1.333931 GTCTATGCCGACGACAGATGA 59.666 52.381 0.00 0.00 0.00 2.92
378 379 1.333931 TCTATGCCGACGACAGATGAC 59.666 52.381 0.00 0.00 0.00 3.06
379 380 0.384309 TATGCCGACGACAGATGACC 59.616 55.000 0.00 0.00 0.00 4.02
380 381 1.323271 ATGCCGACGACAGATGACCT 61.323 55.000 0.00 0.00 0.00 3.85
381 382 0.678684 TGCCGACGACAGATGACCTA 60.679 55.000 0.00 0.00 0.00 3.08
382 383 0.669077 GCCGACGACAGATGACCTAT 59.331 55.000 0.00 0.00 0.00 2.57
383 384 1.600663 GCCGACGACAGATGACCTATG 60.601 57.143 0.00 0.00 0.00 2.23
384 385 1.600663 CCGACGACAGATGACCTATGC 60.601 57.143 0.00 0.00 0.00 3.14
385 386 1.600663 CGACGACAGATGACCTATGCC 60.601 57.143 0.00 0.00 0.00 4.40
386 387 0.385751 ACGACAGATGACCTATGCCG 59.614 55.000 0.00 0.00 0.00 5.69
387 388 0.668535 CGACAGATGACCTATGCCGA 59.331 55.000 0.00 0.00 0.00 5.54
388 389 1.600663 CGACAGATGACCTATGCCGAC 60.601 57.143 0.00 0.00 0.00 4.79
389 390 0.385751 ACAGATGACCTATGCCGACG 59.614 55.000 0.00 0.00 0.00 5.12
390 391 0.319040 CAGATGACCTATGCCGACGG 60.319 60.000 10.29 10.29 0.00 4.79
428 429 3.129502 CCGCGAGTCCGGTAGTGA 61.130 66.667 8.23 0.00 43.24 3.41
429 430 2.478890 CCGCGAGTCCGGTAGTGAT 61.479 63.158 8.23 0.00 43.24 3.06
430 431 1.009900 CGCGAGTCCGGTAGTGATC 60.010 63.158 0.00 0.00 36.06 2.92
431 432 1.712018 CGCGAGTCCGGTAGTGATCA 61.712 60.000 0.00 0.00 36.06 2.92
455 456 4.175337 CGGGCCCGTCCATCACAT 62.175 66.667 36.64 0.00 36.21 3.21
456 457 2.516930 GGGCCCGTCCATCACATG 60.517 66.667 5.69 0.00 36.21 3.21
525 551 1.538512 GGTAGCCGCGTATGTAGATGA 59.461 52.381 4.92 0.00 0.00 2.92
531 557 1.607148 CGCGTATGTAGATGAGACCCA 59.393 52.381 0.00 0.00 0.00 4.51
533 559 2.361119 GCGTATGTAGATGAGACCCACA 59.639 50.000 0.00 0.00 0.00 4.17
534 560 3.551046 GCGTATGTAGATGAGACCCACAG 60.551 52.174 0.00 0.00 0.00 3.66
538 564 1.827969 GTAGATGAGACCCACAGCAGT 59.172 52.381 0.00 0.00 0.00 4.40
539 565 0.612229 AGATGAGACCCACAGCAGTG 59.388 55.000 1.56 1.56 45.47 3.66
540 566 0.322975 GATGAGACCCACAGCAGTGT 59.677 55.000 8.55 0.00 44.39 3.55
541 567 1.550524 GATGAGACCCACAGCAGTGTA 59.449 52.381 8.55 0.00 44.39 2.90
542 568 1.644509 TGAGACCCACAGCAGTGTAT 58.355 50.000 8.55 0.00 44.39 2.29
543 569 1.276138 TGAGACCCACAGCAGTGTATG 59.724 52.381 8.55 0.00 44.39 2.39
544 570 1.276421 GAGACCCACAGCAGTGTATGT 59.724 52.381 8.55 2.52 44.39 2.29
545 571 2.496070 GAGACCCACAGCAGTGTATGTA 59.504 50.000 8.55 0.00 44.39 2.29
546 572 2.497675 AGACCCACAGCAGTGTATGTAG 59.502 50.000 8.55 1.97 44.39 2.74
547 573 2.496070 GACCCACAGCAGTGTATGTAGA 59.504 50.000 8.55 0.00 44.39 2.59
548 574 3.107601 ACCCACAGCAGTGTATGTAGAT 58.892 45.455 8.55 0.00 44.39 1.98
549 575 3.118629 ACCCACAGCAGTGTATGTAGATG 60.119 47.826 8.55 0.00 44.39 2.90
550 576 3.461061 CCACAGCAGTGTATGTAGATGG 58.539 50.000 8.55 0.00 44.39 3.51
551 577 3.461061 CACAGCAGTGTATGTAGATGGG 58.539 50.000 0.22 0.00 40.92 4.00
552 578 3.132824 CACAGCAGTGTATGTAGATGGGA 59.867 47.826 0.22 0.00 40.92 4.37
553 579 3.133003 ACAGCAGTGTATGTAGATGGGAC 59.867 47.826 1.76 0.00 34.05 4.46
554 580 2.700897 AGCAGTGTATGTAGATGGGACC 59.299 50.000 0.00 0.00 0.00 4.46
555 581 2.224305 GCAGTGTATGTAGATGGGACCC 60.224 54.545 2.45 2.45 0.00 4.46
556 582 3.038280 CAGTGTATGTAGATGGGACCCA 58.962 50.000 17.73 17.73 38.19 4.51
557 583 3.039011 AGTGTATGTAGATGGGACCCAC 58.961 50.000 17.78 10.21 35.80 4.61
558 584 2.104281 GTGTATGTAGATGGGACCCACC 59.896 54.545 17.78 5.86 35.80 4.61
574 600 2.497675 CCCACCTAGATGGACCATATCG 59.502 54.545 3.99 0.00 43.02 2.92
713 750 1.352352 TCCAAAGAAGAGCCTGAAGGG 59.648 52.381 0.00 0.00 35.18 3.95
754 795 6.864685 TGACATTTCAATAAAAAGCAGAGCAG 59.135 34.615 0.00 0.00 0.00 4.24
755 796 6.985117 ACATTTCAATAAAAAGCAGAGCAGA 58.015 32.000 0.00 0.00 0.00 4.26
756 797 7.088905 ACATTTCAATAAAAAGCAGAGCAGAG 58.911 34.615 0.00 0.00 0.00 3.35
757 798 4.691860 TCAATAAAAAGCAGAGCAGAGC 57.308 40.909 0.00 0.00 0.00 4.09
758 799 4.074259 TCAATAAAAAGCAGAGCAGAGCA 58.926 39.130 0.00 0.00 0.00 4.26
896 977 3.178046 TCACTAACCTAATGCAGGGTCA 58.822 45.455 8.85 0.00 42.61 4.02
967 1048 2.029828 ACAATCTGTCTCACTCACGTCC 60.030 50.000 0.00 0.00 0.00 4.79
969 1050 0.534427 TCTGTCTCACTCACGTCCGT 60.534 55.000 0.00 0.00 0.00 4.69
1071 1152 1.305046 ACCGGCTGCTACTACCACT 60.305 57.895 0.00 0.00 0.00 4.00
1386 1496 4.854839 CGGACCAAATTTACCGAATGAAAC 59.145 41.667 19.08 0.00 46.94 2.78
1432 1546 0.179113 TCATGCTCAAGTATCGCGCA 60.179 50.000 8.75 0.00 34.83 6.09
1461 1575 0.108329 CGATGCGGACCTTAACCTGT 60.108 55.000 0.00 0.00 0.00 4.00
1685 1799 2.427245 GGAGCGCAAGGAGAGCCTA 61.427 63.158 11.47 0.00 46.28 3.93
1776 1890 2.034221 GGGAGCTTGTGGTCACCC 59.966 66.667 0.00 0.00 42.05 4.61
1838 1952 3.877450 GGCATCAGGATCGCCCCA 61.877 66.667 9.99 0.00 40.07 4.96
1850 1964 0.535328 TCGCCCCAAAAACGTGATGA 60.535 50.000 0.00 0.00 0.00 2.92
1873 1987 6.541278 TGAATTTCATTTCATTTGGTTGTGCA 59.459 30.769 0.00 0.00 30.82 4.57
1890 2007 6.542370 GGTTGTGCATGGTTATCAACTAGTAT 59.458 38.462 12.18 0.00 38.53 2.12
1916 2033 9.621239 TTACTATCCCTTGATTAGATTGAGGAT 57.379 33.333 0.00 0.00 36.80 3.24
2083 3871 6.466812 TGTTTTGGTAGGCTAGTTTAGGTAC 58.533 40.000 0.00 0.00 0.00 3.34
2085 3873 4.235079 TGGTAGGCTAGTTTAGGTACGA 57.765 45.455 0.00 0.00 0.00 3.43
2090 3878 2.102084 GGCTAGTTTAGGTACGAAGGGG 59.898 54.545 0.00 0.00 0.00 4.79
2094 3882 3.999603 AGTTTAGGTACGAAGGGGGTAT 58.000 45.455 0.00 0.00 0.00 2.73
2099 3887 4.814224 AGGTACGAAGGGGGTATTACTA 57.186 45.455 0.00 0.00 0.00 1.82
2101 3889 5.082425 AGGTACGAAGGGGGTATTACTATG 58.918 45.833 0.00 0.00 0.00 2.23
2113 3901 6.826741 GGGGTATTACTATGAAAAGTCAGCAA 59.173 38.462 0.00 0.00 37.14 3.91
2119 3907 4.887071 ACTATGAAAAGTCAGCAAACCACA 59.113 37.500 0.00 0.00 37.14 4.17
2121 3909 3.088532 TGAAAAGTCAGCAAACCACACT 58.911 40.909 0.00 0.00 0.00 3.55
2131 3919 1.593006 CAAACCACACTGACGAGTCAC 59.407 52.381 1.24 0.00 35.46 3.67
2138 3926 0.595588 ACTGACGAGTCACAGCTCAG 59.404 55.000 12.37 5.96 37.61 3.35
2139 3927 0.595588 CTGACGAGTCACAGCTCAGT 59.404 55.000 1.24 0.00 35.46 3.41
2140 3928 0.593618 TGACGAGTCACAGCTCAGTC 59.406 55.000 1.24 0.00 38.37 3.51
2141 3929 0.593618 GACGAGTCACAGCTCAGTCA 59.406 55.000 0.00 0.00 38.10 3.41
2142 3930 0.312416 ACGAGTCACAGCTCAGTCAC 59.688 55.000 0.00 0.00 35.33 3.67
2144 3932 1.067985 CGAGTCACAGCTCAGTCACAT 60.068 52.381 0.00 0.00 35.33 3.21
2145 3933 2.162408 CGAGTCACAGCTCAGTCACATA 59.838 50.000 0.00 0.00 35.33 2.29
2146 3934 3.506810 GAGTCACAGCTCAGTCACATAC 58.493 50.000 0.00 0.00 35.67 2.39
2147 3935 2.095008 AGTCACAGCTCAGTCACATACG 60.095 50.000 0.00 0.00 0.00 3.06
2148 3936 2.095212 GTCACAGCTCAGTCACATACGA 60.095 50.000 0.00 0.00 0.00 3.43
2149 3937 2.162408 TCACAGCTCAGTCACATACGAG 59.838 50.000 0.00 0.00 34.15 4.18
2150 3938 1.135257 ACAGCTCAGTCACATACGAGC 60.135 52.381 0.00 0.00 46.21 5.03
2151 3939 3.721625 GCTCAGTCACATACGAGCA 57.278 52.632 5.42 0.00 45.68 4.26
2152 3940 1.996292 GCTCAGTCACATACGAGCAA 58.004 50.000 5.42 0.00 45.68 3.91
2153 3941 1.923204 GCTCAGTCACATACGAGCAAG 59.077 52.381 5.42 0.00 45.68 4.01
2154 3942 2.672478 GCTCAGTCACATACGAGCAAGT 60.672 50.000 5.42 0.00 45.68 3.16
2155 3943 3.427638 GCTCAGTCACATACGAGCAAGTA 60.428 47.826 5.42 0.00 45.68 2.24
2156 3944 4.734989 GCTCAGTCACATACGAGCAAGTAT 60.735 45.833 5.42 0.00 45.68 2.12
2157 3945 5.505819 GCTCAGTCACATACGAGCAAGTATA 60.506 44.000 5.42 0.00 45.68 1.47
2158 3946 6.445357 TCAGTCACATACGAGCAAGTATAA 57.555 37.500 4.17 0.00 35.72 0.98
2159 3947 7.039313 TCAGTCACATACGAGCAAGTATAAT 57.961 36.000 4.17 0.00 35.72 1.28
2160 3948 8.161699 TCAGTCACATACGAGCAAGTATAATA 57.838 34.615 4.17 0.00 35.72 0.98
2161 3949 8.290325 TCAGTCACATACGAGCAAGTATAATAG 58.710 37.037 4.17 0.00 35.72 1.73
2162 3950 7.539022 CAGTCACATACGAGCAAGTATAATAGG 59.461 40.741 4.17 0.00 35.72 2.57
2163 3951 6.807230 GTCACATACGAGCAAGTATAATAGGG 59.193 42.308 4.17 0.00 35.72 3.53
2164 3952 6.492429 TCACATACGAGCAAGTATAATAGGGT 59.508 38.462 4.17 0.00 35.72 4.34
2165 3953 6.586463 CACATACGAGCAAGTATAATAGGGTG 59.414 42.308 4.17 4.31 35.72 4.61
2166 3954 6.492429 ACATACGAGCAAGTATAATAGGGTGA 59.508 38.462 4.17 0.00 35.72 4.02
2167 3955 5.197682 ACGAGCAAGTATAATAGGGTGAC 57.802 43.478 0.00 0.00 0.00 3.67
2168 3956 4.647853 ACGAGCAAGTATAATAGGGTGACA 59.352 41.667 0.00 0.00 0.00 3.58
2169 3957 5.304614 ACGAGCAAGTATAATAGGGTGACAT 59.695 40.000 0.00 0.00 0.00 3.06
2170 3958 6.492429 ACGAGCAAGTATAATAGGGTGACATA 59.508 38.462 0.00 0.00 0.00 2.29
2171 3959 7.014905 ACGAGCAAGTATAATAGGGTGACATAA 59.985 37.037 0.00 0.00 0.00 1.90
2172 3960 7.542477 CGAGCAAGTATAATAGGGTGACATAAG 59.458 40.741 0.00 0.00 0.00 1.73
2173 3961 7.162082 AGCAAGTATAATAGGGTGACATAAGC 58.838 38.462 0.00 0.00 0.00 3.09
2174 3962 6.090898 GCAAGTATAATAGGGTGACATAAGCG 59.909 42.308 0.00 0.00 0.00 4.68
2175 3963 6.282199 AGTATAATAGGGTGACATAAGCGG 57.718 41.667 0.00 0.00 0.00 5.52
2176 3964 2.930826 AATAGGGTGACATAAGCGGG 57.069 50.000 0.00 0.00 0.00 6.13
2177 3965 0.396811 ATAGGGTGACATAAGCGGGC 59.603 55.000 0.00 0.00 0.00 6.13
2178 3966 0.689745 TAGGGTGACATAAGCGGGCT 60.690 55.000 0.00 0.00 0.00 5.19
2179 3967 0.689745 AGGGTGACATAAGCGGGCTA 60.690 55.000 0.00 0.00 0.00 3.93
2180 3968 0.396811 GGGTGACATAAGCGGGCTAT 59.603 55.000 0.00 0.00 0.00 2.97
2181 3969 1.621814 GGGTGACATAAGCGGGCTATA 59.378 52.381 0.00 0.00 0.00 1.31
2182 3970 2.038033 GGGTGACATAAGCGGGCTATAA 59.962 50.000 0.00 0.00 0.00 0.98
2183 3971 3.326747 GGTGACATAAGCGGGCTATAAG 58.673 50.000 0.00 0.00 0.00 1.73
2184 3972 3.326747 GTGACATAAGCGGGCTATAAGG 58.673 50.000 0.00 0.00 0.00 2.69
2185 3973 2.301870 TGACATAAGCGGGCTATAAGGG 59.698 50.000 0.00 0.00 0.00 3.95
2186 3974 2.302157 GACATAAGCGGGCTATAAGGGT 59.698 50.000 0.00 0.00 0.00 4.34
2187 3975 2.709397 ACATAAGCGGGCTATAAGGGTT 59.291 45.455 0.00 0.00 0.00 4.11
2188 3976 2.922740 TAAGCGGGCTATAAGGGTTG 57.077 50.000 0.00 0.00 0.00 3.77
2189 3977 0.916809 AAGCGGGCTATAAGGGTTGT 59.083 50.000 0.00 0.00 0.00 3.32
2190 3978 0.468648 AGCGGGCTATAAGGGTTGTC 59.531 55.000 0.00 0.00 0.00 3.18
2191 3979 0.179468 GCGGGCTATAAGGGTTGTCA 59.821 55.000 0.00 0.00 0.00 3.58
2192 3980 1.949465 CGGGCTATAAGGGTTGTCAC 58.051 55.000 0.00 0.00 0.00 3.67
2193 3981 1.474498 CGGGCTATAAGGGTTGTCACC 60.474 57.143 0.00 0.00 43.37 4.02
2194 3982 1.844497 GGGCTATAAGGGTTGTCACCT 59.156 52.381 0.00 0.00 43.65 4.00
2195 3983 2.158798 GGGCTATAAGGGTTGTCACCTC 60.159 54.545 0.00 0.00 43.65 3.85
2196 3984 2.772515 GGCTATAAGGGTTGTCACCTCT 59.227 50.000 0.00 0.00 43.65 3.69
2197 3985 3.432326 GGCTATAAGGGTTGTCACCTCTG 60.432 52.174 0.00 0.00 43.65 3.35
2198 3986 3.451178 GCTATAAGGGTTGTCACCTCTGA 59.549 47.826 0.00 0.00 43.65 3.27
2199 3987 4.101741 GCTATAAGGGTTGTCACCTCTGAT 59.898 45.833 0.00 0.00 43.65 2.90
2200 3988 5.396884 GCTATAAGGGTTGTCACCTCTGATT 60.397 44.000 0.00 0.00 43.65 2.57
2201 3989 3.884037 AAGGGTTGTCACCTCTGATTT 57.116 42.857 0.00 0.00 43.65 2.17
2202 3990 4.993705 AAGGGTTGTCACCTCTGATTTA 57.006 40.909 0.00 0.00 43.65 1.40
2203 3991 5.520748 AAGGGTTGTCACCTCTGATTTAT 57.479 39.130 0.00 0.00 43.65 1.40
2204 3992 4.848357 AGGGTTGTCACCTCTGATTTATG 58.152 43.478 0.00 0.00 43.65 1.90
2205 3993 4.536090 AGGGTTGTCACCTCTGATTTATGA 59.464 41.667 0.00 0.00 43.65 2.15
2206 3994 5.192522 AGGGTTGTCACCTCTGATTTATGAT 59.807 40.000 0.00 0.00 43.65 2.45
2207 3995 5.297776 GGGTTGTCACCTCTGATTTATGATG 59.702 44.000 0.00 0.00 43.65 3.07
2208 3996 6.115446 GGTTGTCACCTCTGATTTATGATGA 58.885 40.000 0.00 0.00 40.44 2.92
2209 3997 6.769822 GGTTGTCACCTCTGATTTATGATGAT 59.230 38.462 0.00 0.00 40.44 2.45
2210 3998 7.255035 GGTTGTCACCTCTGATTTATGATGATG 60.255 40.741 0.00 0.00 40.44 3.07
2211 3999 6.892485 TGTCACCTCTGATTTATGATGATGT 58.108 36.000 0.00 0.00 0.00 3.06
2212 4000 6.764560 TGTCACCTCTGATTTATGATGATGTG 59.235 38.462 0.00 0.00 0.00 3.21
2213 4001 6.204301 GTCACCTCTGATTTATGATGATGTGG 59.796 42.308 0.00 0.00 0.00 4.17
2214 4002 6.100134 TCACCTCTGATTTATGATGATGTGGA 59.900 38.462 0.00 0.00 0.00 4.02
2215 4003 6.427242 CACCTCTGATTTATGATGATGTGGAG 59.573 42.308 0.00 0.00 0.00 3.86
2216 4004 5.938710 CCTCTGATTTATGATGATGTGGAGG 59.061 44.000 0.00 0.00 0.00 4.30
2217 4005 6.239800 CCTCTGATTTATGATGATGTGGAGGA 60.240 42.308 0.00 0.00 38.05 3.71
2218 4006 6.766429 TCTGATTTATGATGATGTGGAGGAG 58.234 40.000 0.00 0.00 0.00 3.69
2219 4007 6.556116 TCTGATTTATGATGATGTGGAGGAGA 59.444 38.462 0.00 0.00 0.00 3.71
2220 4008 6.766429 TGATTTATGATGATGTGGAGGAGAG 58.234 40.000 0.00 0.00 0.00 3.20
2221 4009 6.556116 TGATTTATGATGATGTGGAGGAGAGA 59.444 38.462 0.00 0.00 0.00 3.10
2222 4010 6.416631 TTTATGATGATGTGGAGGAGAGAG 57.583 41.667 0.00 0.00 0.00 3.20
2223 4011 2.675583 TGATGATGTGGAGGAGAGAGG 58.324 52.381 0.00 0.00 0.00 3.69
2224 4012 2.245806 TGATGATGTGGAGGAGAGAGGA 59.754 50.000 0.00 0.00 0.00 3.71
2225 4013 2.450867 TGATGTGGAGGAGAGAGGAG 57.549 55.000 0.00 0.00 0.00 3.69
2226 4014 1.925959 TGATGTGGAGGAGAGAGGAGA 59.074 52.381 0.00 0.00 0.00 3.71
2227 4015 2.091939 TGATGTGGAGGAGAGAGGAGAG 60.092 54.545 0.00 0.00 0.00 3.20
2228 4016 0.628522 TGTGGAGGAGAGAGGAGAGG 59.371 60.000 0.00 0.00 0.00 3.69
2229 4017 0.923358 GTGGAGGAGAGAGGAGAGGA 59.077 60.000 0.00 0.00 0.00 3.71
2230 4018 1.133792 GTGGAGGAGAGAGGAGAGGAG 60.134 61.905 0.00 0.00 0.00 3.69
2231 4019 1.274708 TGGAGGAGAGAGGAGAGGAGA 60.275 57.143 0.00 0.00 0.00 3.71
2232 4020 1.421646 GGAGGAGAGAGGAGAGGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
2233 4021 2.408565 GAGGAGAGAGGAGAGGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
2234 4022 2.370189 GAGGAGAGAGGAGAGGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
2235 4023 2.022035 AGGAGAGAGGAGAGGAGAGAGA 60.022 54.545 0.00 0.00 0.00 3.10
2236 4024 2.777692 GGAGAGAGGAGAGGAGAGAGAA 59.222 54.545 0.00 0.00 0.00 2.87
2237 4025 3.181450 GGAGAGAGGAGAGGAGAGAGAAG 60.181 56.522 0.00 0.00 0.00 2.85
2238 4026 3.711704 GAGAGAGGAGAGGAGAGAGAAGA 59.288 52.174 0.00 0.00 0.00 2.87
2239 4027 3.713764 AGAGAGGAGAGGAGAGAGAAGAG 59.286 52.174 0.00 0.00 0.00 2.85
2240 4028 2.780010 AGAGGAGAGGAGAGAGAAGAGG 59.220 54.545 0.00 0.00 0.00 3.69
2241 4029 1.852965 AGGAGAGGAGAGAGAAGAGGG 59.147 57.143 0.00 0.00 0.00 4.30
2242 4030 1.133482 GGAGAGGAGAGAGAAGAGGGG 60.133 61.905 0.00 0.00 0.00 4.79
2243 4031 1.569072 GAGAGGAGAGAGAAGAGGGGT 59.431 57.143 0.00 0.00 0.00 4.95
2244 4032 1.287739 AGAGGAGAGAGAAGAGGGGTG 59.712 57.143 0.00 0.00 0.00 4.61
2245 4033 0.338120 AGGAGAGAGAAGAGGGGTGG 59.662 60.000 0.00 0.00 0.00 4.61
2246 4034 0.336737 GGAGAGAGAAGAGGGGTGGA 59.663 60.000 0.00 0.00 0.00 4.02
2247 4035 1.480789 GAGAGAGAAGAGGGGTGGAC 58.519 60.000 0.00 0.00 0.00 4.02
2248 4036 0.041982 AGAGAGAAGAGGGGTGGACC 59.958 60.000 0.00 0.00 39.11 4.46
2249 4037 1.305381 AGAGAAGAGGGGTGGACCG 60.305 63.158 0.00 0.00 41.60 4.79
2250 4038 1.609794 GAGAAGAGGGGTGGACCGT 60.610 63.158 0.00 0.00 41.60 4.83
2251 4039 0.324091 GAGAAGAGGGGTGGACCGTA 60.324 60.000 0.00 0.00 41.60 4.02
2252 4040 0.115745 AGAAGAGGGGTGGACCGTAA 59.884 55.000 0.00 0.00 41.60 3.18
2253 4041 0.978907 GAAGAGGGGTGGACCGTAAA 59.021 55.000 0.00 0.00 41.60 2.01
2254 4042 0.689055 AAGAGGGGTGGACCGTAAAC 59.311 55.000 0.00 0.00 41.60 2.01
2255 4043 0.178912 AGAGGGGTGGACCGTAAACT 60.179 55.000 0.00 0.00 41.60 2.66
2256 4044 0.689055 GAGGGGTGGACCGTAAACTT 59.311 55.000 0.00 0.00 41.60 2.66
2257 4045 0.399075 AGGGGTGGACCGTAAACTTG 59.601 55.000 0.00 0.00 41.60 3.16
2258 4046 0.109153 GGGGTGGACCGTAAACTTGT 59.891 55.000 0.00 0.00 41.60 3.16
2259 4047 1.347378 GGGGTGGACCGTAAACTTGTA 59.653 52.381 0.00 0.00 41.60 2.41
2260 4048 2.613725 GGGGTGGACCGTAAACTTGTAG 60.614 54.545 0.00 0.00 41.60 2.74
2261 4049 2.037641 GGGTGGACCGTAAACTTGTAGT 59.962 50.000 0.00 0.00 36.71 2.73
2262 4050 3.320626 GGTGGACCGTAAACTTGTAGTC 58.679 50.000 0.00 0.00 0.00 2.59
2263 4051 3.243839 GGTGGACCGTAAACTTGTAGTCA 60.244 47.826 0.00 0.00 0.00 3.41
2264 4052 3.985925 GTGGACCGTAAACTTGTAGTCAG 59.014 47.826 0.00 0.00 0.00 3.51
2265 4053 2.991866 GGACCGTAAACTTGTAGTCAGC 59.008 50.000 0.00 0.00 0.00 4.26
2266 4054 3.305881 GGACCGTAAACTTGTAGTCAGCT 60.306 47.826 0.00 0.00 0.00 4.24
2267 4055 3.650139 ACCGTAAACTTGTAGTCAGCTG 58.350 45.455 7.63 7.63 0.00 4.24
2268 4056 2.412089 CCGTAAACTTGTAGTCAGCTGC 59.588 50.000 9.47 4.26 0.00 5.25
2269 4057 3.057019 CGTAAACTTGTAGTCAGCTGCA 58.943 45.455 9.47 0.00 35.56 4.41
2270 4058 3.121944 CGTAAACTTGTAGTCAGCTGCAG 59.878 47.826 10.11 10.11 38.52 4.41
2271 4059 1.517242 AACTTGTAGTCAGCTGCAGC 58.483 50.000 31.53 31.53 38.52 5.25
2272 4060 0.394192 ACTTGTAGTCAGCTGCAGCA 59.606 50.000 38.24 18.36 45.16 4.41
2273 4061 0.795085 CTTGTAGTCAGCTGCAGCAC 59.205 55.000 38.24 28.18 45.16 4.40
2274 4062 0.945743 TTGTAGTCAGCTGCAGCACG 60.946 55.000 38.24 28.24 45.16 5.34
2275 4063 1.080501 GTAGTCAGCTGCAGCACGA 60.081 57.895 38.24 29.95 45.16 4.35
2276 4064 1.075425 GTAGTCAGCTGCAGCACGAG 61.075 60.000 38.24 24.32 45.16 4.18
2277 4065 2.825726 TAGTCAGCTGCAGCACGAGC 62.826 60.000 38.24 24.75 45.16 5.03
2287 4075 2.939022 GCACGAGCTCCAACACAC 59.061 61.111 8.47 0.00 37.91 3.82
2288 4076 1.595382 GCACGAGCTCCAACACACT 60.595 57.895 8.47 0.00 37.91 3.55
2289 4077 1.160329 GCACGAGCTCCAACACACTT 61.160 55.000 8.47 0.00 37.91 3.16
2290 4078 1.299541 CACGAGCTCCAACACACTTT 58.700 50.000 8.47 0.00 0.00 2.66
2291 4079 1.003545 CACGAGCTCCAACACACTTTG 60.004 52.381 8.47 0.00 0.00 2.77
2292 4080 1.299541 CGAGCTCCAACACACTTTGT 58.700 50.000 8.47 0.00 41.74 2.83
2337 4125 9.817809 CAAGCATTAACTACCTATTGTTAGAGA 57.182 33.333 0.00 0.00 31.46 3.10
2378 4166 7.233757 TGAAAAGGCTTTTAGGTTGGCTATAAA 59.766 33.333 24.15 0.00 35.53 1.40
2382 4170 6.895204 AGGCTTTTAGGTTGGCTATAAATGAA 59.105 34.615 0.00 0.00 34.81 2.57
2383 4171 7.068716 AGGCTTTTAGGTTGGCTATAAATGAAG 59.931 37.037 0.00 0.00 34.81 3.02
2430 4218 6.763610 AGCCGGCTATATTATTAATCTTGCTC 59.236 38.462 31.86 0.00 0.00 4.26
2466 4254 1.881973 GAAATGCTCACACAAGCCAGA 59.118 47.619 0.00 0.00 41.77 3.86
2470 4258 0.673022 GCTCACACAAGCCAGAGAGG 60.673 60.000 0.00 0.00 36.22 3.69
2479 4267 1.145819 GCCAGAGAGGGTGCATCTC 59.854 63.158 7.59 7.59 42.95 2.75
2485 4273 1.596477 GAGGGTGCATCTCCGCATC 60.596 63.158 0.00 0.00 45.26 3.91
2500 4295 1.889829 CGCATCTAACCCTAGCTAGCT 59.110 52.381 23.12 23.12 0.00 3.32
2513 4308 5.427481 CCCTAGCTAGCTATCTACCTCTAGT 59.573 48.000 24.36 0.00 33.06 2.57
2633 4428 6.948309 ACTTTCACATAAGGGCATTTCTAACT 59.052 34.615 0.00 0.00 0.00 2.24
2714 4511 3.135814 GGACCTAACCGATCCCCG 58.864 66.667 0.00 0.00 38.18 5.73
2730 4527 2.707257 TCCCCGAAAAGTAGTGGAGTTT 59.293 45.455 0.00 0.00 31.63 2.66
3016 6229 4.014406 TGCGATAGAACAACTAGGACTCA 58.986 43.478 0.00 0.00 34.35 3.41
3046 6259 1.073763 TGCCAGTGGTGCTCAATAAGT 59.926 47.619 11.74 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 8.459782 GATGAAATCTATGCCGACGGCTTTAC 62.460 46.154 36.54 20.68 44.73 2.01
22 23 6.531235 GATGAAATCTATGCCGACGGCTTTA 61.531 44.000 36.54 25.86 44.73 1.85
23 24 5.800285 GATGAAATCTATGCCGACGGCTTT 61.800 45.833 36.54 27.46 44.73 3.51
24 25 4.353894 GATGAAATCTATGCCGACGGCTT 61.354 47.826 36.54 31.93 44.73 4.35
25 26 2.868044 GATGAAATCTATGCCGACGGCT 60.868 50.000 36.54 24.49 44.73 5.52
26 27 1.461127 GATGAAATCTATGCCGACGGC 59.539 52.381 31.85 31.85 44.71 5.68
27 28 2.754472 TGATGAAATCTATGCCGACGG 58.246 47.619 10.29 10.29 45.81 4.79
28 29 4.705492 CATTGATGAAATCTATGCCGACG 58.295 43.478 0.00 0.00 46.32 5.12
69 70 2.112718 CTGGAGGCAGGGCTATGC 59.887 66.667 6.68 6.68 45.74 3.14
70 71 1.766625 CTCCTGGAGGCAGGGCTATG 61.767 65.000 16.19 0.00 42.50 2.23
71 72 1.461075 CTCCTGGAGGCAGGGCTAT 60.461 63.158 16.19 0.00 42.50 2.97
72 73 2.041508 CTCCTGGAGGCAGGGCTA 60.042 66.667 16.19 0.00 42.50 3.93
81 82 4.087892 CCGTGGTGCCTCCTGGAG 62.088 72.222 17.02 17.02 35.44 3.86
84 85 3.612247 CTTCCCGTGGTGCCTCCTG 62.612 68.421 0.00 0.00 37.07 3.86
85 86 3.322466 CTTCCCGTGGTGCCTCCT 61.322 66.667 0.00 0.00 37.07 3.69
91 92 4.619227 ACGTGGCTTCCCGTGGTG 62.619 66.667 0.00 0.00 35.69 4.17
103 104 1.881252 GCATACCTACGCCACGTGG 60.881 63.158 30.66 30.66 41.39 4.94
104 105 3.700961 GCATACCTACGCCACGTG 58.299 61.111 9.08 9.08 41.39 4.49
108 109 3.128632 CGTCGGCATACCTACGCCA 62.129 63.158 0.00 0.00 46.50 5.69
109 110 2.354305 CGTCGGCATACCTACGCC 60.354 66.667 0.00 0.00 46.50 5.68
128 129 2.417239 GAGATCTATGCCGACGACTAGG 59.583 54.545 0.00 0.00 0.00 3.02
129 130 2.417239 GGAGATCTATGCCGACGACTAG 59.583 54.545 0.00 0.00 0.00 2.57
130 131 2.224450 TGGAGATCTATGCCGACGACTA 60.224 50.000 0.00 0.00 0.00 2.59
131 132 1.240256 GGAGATCTATGCCGACGACT 58.760 55.000 0.00 0.00 0.00 4.18
132 133 0.952280 TGGAGATCTATGCCGACGAC 59.048 55.000 0.00 0.00 0.00 4.34
133 134 0.952280 GTGGAGATCTATGCCGACGA 59.048 55.000 0.00 0.00 0.00 4.20
134 135 0.039074 GGTGGAGATCTATGCCGACG 60.039 60.000 0.00 0.00 0.00 5.12
135 136 1.333177 AGGTGGAGATCTATGCCGAC 58.667 55.000 0.00 0.00 0.00 4.79
136 137 2.971901 TAGGTGGAGATCTATGCCGA 57.028 50.000 0.00 0.00 0.00 5.54
137 138 3.516981 CATAGGTGGAGATCTATGCCG 57.483 52.381 0.00 0.00 36.66 5.69
140 141 3.092301 TCGGCATAGGTGGAGATCTATG 58.908 50.000 0.00 0.00 43.68 2.23
141 142 3.093057 GTCGGCATAGGTGGAGATCTAT 58.907 50.000 0.00 0.00 0.00 1.98
142 143 2.515854 GTCGGCATAGGTGGAGATCTA 58.484 52.381 0.00 0.00 0.00 1.98
143 144 1.333177 GTCGGCATAGGTGGAGATCT 58.667 55.000 0.00 0.00 0.00 2.75
144 145 0.039074 CGTCGGCATAGGTGGAGATC 60.039 60.000 0.00 0.00 0.00 2.75
145 146 1.464376 CCGTCGGCATAGGTGGAGAT 61.464 60.000 0.00 0.00 0.00 2.75
146 147 2.125326 CCGTCGGCATAGGTGGAGA 61.125 63.158 0.00 0.00 0.00 3.71
147 148 2.417516 CCGTCGGCATAGGTGGAG 59.582 66.667 0.00 0.00 0.00 3.86
163 164 2.171725 GTATGCCGACGGTCAAGCC 61.172 63.158 16.73 0.00 0.00 4.35
164 165 2.171725 GGTATGCCGACGGTCAAGC 61.172 63.158 16.73 10.72 0.00 4.01
165 166 0.742505 TAGGTATGCCGACGGTCAAG 59.257 55.000 16.73 0.00 40.50 3.02
166 167 1.067974 CATAGGTATGCCGACGGTCAA 59.932 52.381 16.73 1.87 40.50 3.18
167 168 0.671796 CATAGGTATGCCGACGGTCA 59.328 55.000 16.73 14.22 40.50 4.02
168 169 3.491581 CATAGGTATGCCGACGGTC 57.508 57.895 16.73 8.54 40.50 4.79
187 188 0.680921 AATCACGGGAAGCCATGTGG 60.681 55.000 0.00 0.00 33.94 4.17
188 189 0.734889 GAATCACGGGAAGCCATGTG 59.265 55.000 0.00 0.00 34.27 3.21
189 190 0.327924 TGAATCACGGGAAGCCATGT 59.672 50.000 0.00 0.00 0.00 3.21
190 191 1.605710 GATGAATCACGGGAAGCCATG 59.394 52.381 0.00 0.00 0.00 3.66
191 192 1.811558 CGATGAATCACGGGAAGCCAT 60.812 52.381 0.00 0.00 0.00 4.40
192 193 0.461870 CGATGAATCACGGGAAGCCA 60.462 55.000 0.00 0.00 0.00 4.75
193 194 1.160329 CCGATGAATCACGGGAAGCC 61.160 60.000 13.75 0.00 44.59 4.35
194 195 2.311294 CCGATGAATCACGGGAAGC 58.689 57.895 13.75 0.00 44.59 3.86
200 201 0.096976 AAAAGCGCCGATGAATCACG 59.903 50.000 2.29 0.00 0.00 4.35
201 202 1.130373 TCAAAAGCGCCGATGAATCAC 59.870 47.619 2.29 0.00 0.00 3.06
202 203 1.130373 GTCAAAAGCGCCGATGAATCA 59.870 47.619 2.29 0.00 0.00 2.57
203 204 1.130373 TGTCAAAAGCGCCGATGAATC 59.870 47.619 2.29 0.00 0.00 2.52
204 205 1.131126 CTGTCAAAAGCGCCGATGAAT 59.869 47.619 2.29 0.00 0.00 2.57
205 206 0.516877 CTGTCAAAAGCGCCGATGAA 59.483 50.000 2.29 0.00 0.00 2.57
206 207 1.911293 GCTGTCAAAAGCGCCGATGA 61.911 55.000 2.29 2.63 32.56 2.92
207 208 1.512734 GCTGTCAAAAGCGCCGATG 60.513 57.895 2.29 0.00 32.56 3.84
208 209 2.870372 GCTGTCAAAAGCGCCGAT 59.130 55.556 2.29 0.00 32.56 4.18
214 215 2.127232 GACGGCGCTGTCAAAAGC 60.127 61.111 37.93 15.54 38.75 3.51
215 216 2.556287 GGACGGCGCTGTCAAAAG 59.444 61.111 41.25 12.18 40.72 2.27
216 217 3.342627 CGGACGGCGCTGTCAAAA 61.343 61.111 41.25 0.00 40.72 2.44
217 218 4.595538 ACGGACGGCGCTGTCAAA 62.596 61.111 41.25 0.00 40.72 2.69
218 219 4.595538 AACGGACGGCGCTGTCAA 62.596 61.111 41.25 0.00 40.72 3.18
225 226 4.986587 TGACGACAACGGACGGCG 62.987 66.667 4.80 4.80 43.29 6.46
226 227 3.103911 CTGACGACAACGGACGGC 61.104 66.667 0.00 0.00 44.46 5.68
227 228 3.103911 GCTGACGACAACGGACGG 61.104 66.667 0.00 0.00 44.46 4.79
228 229 3.103911 GGCTGACGACAACGGACG 61.104 66.667 0.00 0.00 44.46 4.79
238 239 1.202031 GGCAGTATTTTTCGGCTGACG 60.202 52.381 0.00 0.00 46.11 4.35
239 240 1.202031 CGGCAGTATTTTTCGGCTGAC 60.202 52.381 0.00 0.00 35.12 3.51
240 241 1.083489 CGGCAGTATTTTTCGGCTGA 58.917 50.000 0.00 0.00 35.12 4.26
241 242 1.083489 TCGGCAGTATTTTTCGGCTG 58.917 50.000 0.00 0.00 34.63 4.85
242 243 1.084289 GTCGGCAGTATTTTTCGGCT 58.916 50.000 0.00 0.00 0.00 5.52
243 244 0.247537 CGTCGGCAGTATTTTTCGGC 60.248 55.000 0.00 0.00 0.00 5.54
244 245 0.372334 CCGTCGGCAGTATTTTTCGG 59.628 55.000 0.00 0.00 0.00 4.30
245 246 3.869866 CCGTCGGCAGTATTTTTCG 57.130 52.632 0.00 0.00 0.00 3.46
275 276 0.898789 ATAGGACCCTATGCCGACGG 60.899 60.000 10.29 10.29 37.80 4.79
276 277 0.243907 CATAGGACCCTATGCCGACG 59.756 60.000 19.65 0.03 46.03 5.12
283 284 0.898789 CCGTCGGCATAGGACCCTAT 60.899 60.000 0.00 2.80 39.60 2.57
284 285 1.529948 CCGTCGGCATAGGACCCTA 60.530 63.158 0.00 0.00 0.00 3.53
285 286 2.838225 CCGTCGGCATAGGACCCT 60.838 66.667 0.00 0.00 0.00 4.34
296 297 3.841222 GCATTGTTTTGCCGTCGG 58.159 55.556 6.99 6.99 36.60 4.79
302 303 1.001745 GACCGTCGGCATTGTTTTGC 61.002 55.000 12.28 0.00 42.01 3.68
303 304 0.591170 AGACCGTCGGCATTGTTTTG 59.409 50.000 12.28 0.00 0.00 2.44
304 305 0.591170 CAGACCGTCGGCATTGTTTT 59.409 50.000 12.28 0.00 0.00 2.43
305 306 0.250124 TCAGACCGTCGGCATTGTTT 60.250 50.000 12.28 0.00 0.00 2.83
306 307 0.949105 GTCAGACCGTCGGCATTGTT 60.949 55.000 12.28 0.00 0.00 2.83
307 308 1.374252 GTCAGACCGTCGGCATTGT 60.374 57.895 12.28 0.00 0.00 2.71
308 309 0.948623 TTGTCAGACCGTCGGCATTG 60.949 55.000 12.28 7.55 0.00 2.82
309 310 0.670546 CTTGTCAGACCGTCGGCATT 60.671 55.000 12.28 0.00 0.00 3.56
310 311 1.079819 CTTGTCAGACCGTCGGCAT 60.080 57.895 12.28 0.00 0.00 4.40
311 312 2.197605 TCTTGTCAGACCGTCGGCA 61.198 57.895 12.28 0.00 0.00 5.69
312 313 1.733399 GTCTTGTCAGACCGTCGGC 60.733 63.158 12.28 4.24 43.50 5.54
313 314 4.554163 GTCTTGTCAGACCGTCGG 57.446 61.111 10.48 10.48 43.50 4.79
320 321 1.197036 CGTCAGCGTAGTCTTGTCAGA 59.803 52.381 0.00 0.00 0.00 3.27
321 322 1.607713 CGTCAGCGTAGTCTTGTCAG 58.392 55.000 0.00 0.00 0.00 3.51
322 323 3.767287 CGTCAGCGTAGTCTTGTCA 57.233 52.632 0.00 0.00 0.00 3.58
340 341 2.025727 CCCGTCGGCGTAGATCAC 59.974 66.667 9.28 0.00 36.15 3.06
341 342 2.438975 ACCCGTCGGCGTAGATCA 60.439 61.111 9.28 0.00 36.15 2.92
342 343 0.882042 TAGACCCGTCGGCGTAGATC 60.882 60.000 9.28 0.00 36.15 2.75
343 344 0.250640 ATAGACCCGTCGGCGTAGAT 60.251 55.000 9.28 0.00 36.15 1.98
344 345 1.146930 ATAGACCCGTCGGCGTAGA 59.853 57.895 9.28 0.00 36.15 2.59
345 346 1.281960 CATAGACCCGTCGGCGTAG 59.718 63.158 9.28 1.04 36.15 3.51
346 347 2.837883 GCATAGACCCGTCGGCGTA 61.838 63.158 9.28 0.00 36.15 4.42
347 348 4.203076 GCATAGACCCGTCGGCGT 62.203 66.667 9.28 5.34 36.15 5.68
348 349 4.944372 GGCATAGACCCGTCGGCG 62.944 72.222 0.29 0.29 37.95 6.46
349 350 4.944372 CGGCATAGACCCGTCGGC 62.944 72.222 5.50 0.00 40.84 5.54
350 351 3.214123 TCGGCATAGACCCGTCGG 61.214 66.667 3.60 3.60 45.71 4.79
351 352 2.025727 GTCGGCATAGACCCGTCG 59.974 66.667 0.00 0.00 45.71 5.12
352 353 2.025727 CGTCGGCATAGACCCGTC 59.974 66.667 0.00 0.00 45.71 4.79
353 354 2.438975 TCGTCGGCATAGACCCGT 60.439 61.111 0.00 0.00 45.71 5.28
354 355 2.025727 GTCGTCGGCATAGACCCG 59.974 66.667 0.00 0.00 46.88 5.28
355 356 1.065928 CTGTCGTCGGCATAGACCC 59.934 63.158 0.00 0.00 37.85 4.46
356 357 0.669077 ATCTGTCGTCGGCATAGACC 59.331 55.000 0.00 0.00 37.85 3.85
357 358 1.333931 TCATCTGTCGTCGGCATAGAC 59.666 52.381 0.00 0.00 37.76 2.59
358 359 1.333931 GTCATCTGTCGTCGGCATAGA 59.666 52.381 0.00 0.00 0.00 1.98
359 360 1.600663 GGTCATCTGTCGTCGGCATAG 60.601 57.143 0.00 0.00 0.00 2.23
360 361 0.384309 GGTCATCTGTCGTCGGCATA 59.616 55.000 0.00 0.00 0.00 3.14
361 362 1.141881 GGTCATCTGTCGTCGGCAT 59.858 57.895 0.00 0.00 0.00 4.40
362 363 0.678684 TAGGTCATCTGTCGTCGGCA 60.679 55.000 0.00 0.00 0.00 5.69
363 364 0.669077 ATAGGTCATCTGTCGTCGGC 59.331 55.000 0.00 0.00 0.00 5.54
364 365 1.600663 GCATAGGTCATCTGTCGTCGG 60.601 57.143 0.00 0.00 0.00 4.79
365 366 1.600663 GGCATAGGTCATCTGTCGTCG 60.601 57.143 0.00 0.00 0.00 5.12
366 367 1.600663 CGGCATAGGTCATCTGTCGTC 60.601 57.143 0.00 0.00 33.59 4.20
367 368 0.385751 CGGCATAGGTCATCTGTCGT 59.614 55.000 0.00 0.00 33.59 4.34
368 369 0.668535 TCGGCATAGGTCATCTGTCG 59.331 55.000 0.00 0.00 39.23 4.35
369 370 1.600663 CGTCGGCATAGGTCATCTGTC 60.601 57.143 0.00 0.00 0.00 3.51
370 371 0.385751 CGTCGGCATAGGTCATCTGT 59.614 55.000 0.00 0.00 0.00 3.41
371 372 0.319040 CCGTCGGCATAGGTCATCTG 60.319 60.000 0.00 0.00 0.00 2.90
372 373 2.041976 CCGTCGGCATAGGTCATCT 58.958 57.895 0.00 0.00 0.00 2.90
373 374 4.655527 CCGTCGGCATAGGTCATC 57.344 61.111 0.00 0.00 0.00 2.92
405 406 4.647615 CCGGACTCGCGGCCTATG 62.648 72.222 6.13 0.00 34.56 2.23
406 407 3.779850 TACCGGACTCGCGGCCTAT 62.780 63.158 9.46 0.00 34.56 2.57
407 408 4.488136 TACCGGACTCGCGGCCTA 62.488 66.667 9.46 0.00 34.56 3.93
410 411 4.849329 CACTACCGGACTCGCGGC 62.849 72.222 9.46 0.00 34.56 6.53
411 412 2.389866 GATCACTACCGGACTCGCGG 62.390 65.000 9.46 0.00 34.56 6.46
412 413 1.009900 GATCACTACCGGACTCGCG 60.010 63.158 9.46 0.00 34.56 5.87
413 414 0.248539 GTGATCACTACCGGACTCGC 60.249 60.000 18.83 0.00 34.56 5.03
414 415 1.092348 TGTGATCACTACCGGACTCG 58.908 55.000 25.55 0.00 0.00 4.18
415 416 2.799917 GCATGTGATCACTACCGGACTC 60.800 54.545 25.55 0.00 0.00 3.36
416 417 1.137086 GCATGTGATCACTACCGGACT 59.863 52.381 25.55 0.00 0.00 3.85
417 418 1.571919 GCATGTGATCACTACCGGAC 58.428 55.000 25.55 5.75 0.00 4.79
418 419 0.464036 GGCATGTGATCACTACCGGA 59.536 55.000 25.55 5.58 0.00 5.14
419 420 0.532862 GGGCATGTGATCACTACCGG 60.533 60.000 25.55 0.00 0.00 5.28
420 421 0.875908 CGGGCATGTGATCACTACCG 60.876 60.000 25.55 25.15 0.00 4.02
421 422 0.532862 CCGGGCATGTGATCACTACC 60.533 60.000 25.55 21.55 0.00 3.18
422 423 0.532862 CCCGGGCATGTGATCACTAC 60.533 60.000 25.55 14.61 0.00 2.73
423 424 1.829456 CCCGGGCATGTGATCACTA 59.171 57.895 25.55 13.07 0.00 2.74
424 425 2.591753 CCCGGGCATGTGATCACT 59.408 61.111 25.55 9.43 0.00 3.41
425 426 3.211963 GCCCGGGCATGTGATCAC 61.212 66.667 40.73 19.27 41.49 3.06
426 427 4.504596 GGCCCGGGCATGTGATCA 62.505 66.667 44.46 0.00 44.11 2.92
444 445 0.028902 CAGCATGCATGTGATGGACG 59.971 55.000 26.79 0.00 32.12 4.79
453 454 1.663379 CCCACCTGTCAGCATGCATG 61.663 60.000 22.70 22.70 34.76 4.06
454 455 1.379443 CCCACCTGTCAGCATGCAT 60.379 57.895 21.98 1.69 34.76 3.96
455 456 2.034532 CCCACCTGTCAGCATGCA 59.965 61.111 21.98 0.00 34.76 3.96
456 457 2.042831 GTCCCACCTGTCAGCATGC 61.043 63.158 10.51 10.51 34.76 4.06
479 480 4.191544 TGTGCCAAGTGTAGAGATAATGC 58.808 43.478 0.00 0.00 0.00 3.56
531 557 3.133003 GTCCCATCTACATACACTGCTGT 59.867 47.826 0.00 0.00 0.00 4.40
533 559 2.700897 GGTCCCATCTACATACACTGCT 59.299 50.000 0.00 0.00 0.00 4.24
534 560 2.224305 GGGTCCCATCTACATACACTGC 60.224 54.545 1.78 0.00 0.00 4.40
538 564 2.022428 AGGTGGGTCCCATCTACATACA 60.022 50.000 23.27 0.00 44.12 2.29
539 565 2.690840 AGGTGGGTCCCATCTACATAC 58.309 52.381 23.27 1.78 44.12 2.39
540 566 3.730594 TCTAGGTGGGTCCCATCTACATA 59.269 47.826 25.02 11.94 44.12 2.29
541 567 2.522705 TCTAGGTGGGTCCCATCTACAT 59.477 50.000 25.02 7.68 44.12 2.29
542 568 1.934480 TCTAGGTGGGTCCCATCTACA 59.066 52.381 25.02 14.07 44.12 2.74
543 569 2.769602 TCTAGGTGGGTCCCATCTAC 57.230 55.000 25.02 11.11 44.12 2.59
544 570 2.158158 CCATCTAGGTGGGTCCCATCTA 60.158 54.545 26.59 26.59 44.12 1.98
546 572 1.059913 CCATCTAGGTGGGTCCCATC 58.940 60.000 15.49 14.73 35.28 3.51
547 573 0.647738 TCCATCTAGGTGGGTCCCAT 59.352 55.000 22.17 0.66 39.80 4.00
548 574 0.326238 GTCCATCTAGGTGGGTCCCA 60.326 60.000 22.17 6.47 39.80 4.37
549 575 1.054978 GGTCCATCTAGGTGGGTCCC 61.055 65.000 22.17 15.06 39.80 4.46
550 576 0.326238 TGGTCCATCTAGGTGGGTCC 60.326 60.000 22.17 22.15 39.80 4.46
551 577 1.807814 ATGGTCCATCTAGGTGGGTC 58.192 55.000 22.17 14.60 39.80 4.46
552 578 3.521727 GATATGGTCCATCTAGGTGGGT 58.478 50.000 22.17 8.52 39.80 4.51
553 579 2.497675 CGATATGGTCCATCTAGGTGGG 59.502 54.545 22.17 5.58 39.80 4.61
554 580 3.165875 ACGATATGGTCCATCTAGGTGG 58.834 50.000 16.63 16.63 40.76 4.61
555 581 3.119814 CGACGATATGGTCCATCTAGGTG 60.120 52.174 7.92 0.00 39.02 4.00
556 582 3.082548 CGACGATATGGTCCATCTAGGT 58.917 50.000 7.92 2.58 39.02 3.08
557 583 3.344515 TCGACGATATGGTCCATCTAGG 58.655 50.000 7.92 0.00 39.47 3.02
558 584 3.181505 GCTCGACGATATGGTCCATCTAG 60.182 52.174 7.92 1.46 33.30 2.43
574 600 1.537135 GCTAAGGTCCTCATGCTCGAC 60.537 57.143 0.00 0.00 0.00 4.20
599 625 1.134670 GGTCCTCGAGCTTGCATAGTT 60.135 52.381 6.99 0.00 0.00 2.24
602 628 1.123077 ATGGTCCTCGAGCTTGCATA 58.877 50.000 6.99 0.00 0.00 3.14
603 629 0.254178 AATGGTCCTCGAGCTTGCAT 59.746 50.000 6.99 0.00 0.00 3.96
757 798 2.182014 CGCATCATTGTTGCACTGATG 58.818 47.619 18.79 18.79 46.86 3.07
758 799 1.814394 ACGCATCATTGTTGCACTGAT 59.186 42.857 17.40 0.00 40.14 2.90
772 813 4.811555 TGGCAAATGATAAGTACGCATC 57.188 40.909 0.00 3.53 0.00 3.91
896 977 0.626916 AGGTCTAGAAGCCGGAGACT 59.373 55.000 17.07 9.41 39.66 3.24
1071 1152 0.679960 TAGTAGAGGTGCTGCGCTCA 60.680 55.000 9.73 3.52 34.03 4.26
1386 1496 6.880942 ACTACTAGATAGCTTTACCTTCCG 57.119 41.667 0.00 0.00 33.73 4.30
1432 1546 0.039978 GTCCGCATCGATCGATCAGT 60.040 55.000 27.20 5.27 31.62 3.41
1484 1598 4.779733 TCCGCCACCTCCTCTCCC 62.780 72.222 0.00 0.00 0.00 4.30
1505 1619 1.157870 CCAGCGACCACACGTTCTTT 61.158 55.000 0.00 0.00 35.59 2.52
1685 1799 2.304831 GCCCCTGGCCTTCTTCTCT 61.305 63.158 3.32 0.00 44.06 3.10
1776 1890 2.973899 CCCACCGTCCTGAGACAG 59.026 66.667 0.00 0.00 43.73 3.51
1811 1925 2.187946 CTGATGCCCCTGACGACC 59.812 66.667 0.00 0.00 0.00 4.79
1850 1964 6.939132 TGCACAACCAAATGAAATGAAATT 57.061 29.167 0.00 0.00 38.98 1.82
1890 2007 9.621239 ATCCTCAATCTAATCAAGGGATAGTAA 57.379 33.333 0.00 0.00 32.09 2.24
1916 2033 1.413812 TCAGCTCAGAGCACAAGTGAA 59.586 47.619 24.64 1.69 45.56 3.18
2060 3848 5.578336 CGTACCTAAACTAGCCTACCAAAAC 59.422 44.000 0.00 0.00 0.00 2.43
2083 3871 6.589135 ACTTTTCATAGTAATACCCCCTTCG 58.411 40.000 0.00 0.00 0.00 3.79
2085 3873 7.519347 TGACTTTTCATAGTAATACCCCCTT 57.481 36.000 0.00 0.00 0.00 3.95
2090 3878 8.182227 GGTTTGCTGACTTTTCATAGTAATACC 58.818 37.037 0.00 0.00 0.00 2.73
2094 3882 6.544197 TGTGGTTTGCTGACTTTTCATAGTAA 59.456 34.615 0.00 0.00 0.00 2.24
2099 3887 3.701040 AGTGTGGTTTGCTGACTTTTCAT 59.299 39.130 0.00 0.00 0.00 2.57
2101 3889 3.128589 TCAGTGTGGTTTGCTGACTTTTC 59.871 43.478 0.00 0.00 34.72 2.29
2113 3901 0.821517 TGTGACTCGTCAGTGTGGTT 59.178 50.000 0.00 0.00 40.75 3.67
2119 3907 0.595588 CTGAGCTGTGACTCGTCAGT 59.404 55.000 0.00 0.00 40.75 3.41
2121 3909 0.593618 GACTGAGCTGTGACTCGTCA 59.406 55.000 0.00 0.00 39.68 4.35
2131 3919 1.135286 TGCTCGTATGTGACTGAGCTG 60.135 52.381 13.45 0.00 46.18 4.24
2138 3926 6.807230 CCCTATTATACTTGCTCGTATGTGAC 59.193 42.308 8.21 0.00 32.63 3.67
2139 3927 6.492429 ACCCTATTATACTTGCTCGTATGTGA 59.508 38.462 8.21 0.00 32.63 3.58
2140 3928 6.586463 CACCCTATTATACTTGCTCGTATGTG 59.414 42.308 8.21 4.22 32.63 3.21
2141 3929 6.492429 TCACCCTATTATACTTGCTCGTATGT 59.508 38.462 8.21 1.90 32.63 2.29
2142 3930 6.807230 GTCACCCTATTATACTTGCTCGTATG 59.193 42.308 8.21 0.00 32.63 2.39
2144 3932 5.829391 TGTCACCCTATTATACTTGCTCGTA 59.171 40.000 0.00 0.00 0.00 3.43
2145 3933 4.647853 TGTCACCCTATTATACTTGCTCGT 59.352 41.667 0.00 0.00 0.00 4.18
2146 3934 5.196341 TGTCACCCTATTATACTTGCTCG 57.804 43.478 0.00 0.00 0.00 5.03
2147 3935 7.332182 GCTTATGTCACCCTATTATACTTGCTC 59.668 40.741 0.00 0.00 0.00 4.26
2148 3936 7.162082 GCTTATGTCACCCTATTATACTTGCT 58.838 38.462 0.00 0.00 0.00 3.91
2149 3937 6.090898 CGCTTATGTCACCCTATTATACTTGC 59.909 42.308 0.00 0.00 0.00 4.01
2150 3938 6.590292 CCGCTTATGTCACCCTATTATACTTG 59.410 42.308 0.00 0.00 0.00 3.16
2151 3939 6.295688 CCCGCTTATGTCACCCTATTATACTT 60.296 42.308 0.00 0.00 0.00 2.24
2152 3940 5.187186 CCCGCTTATGTCACCCTATTATACT 59.813 44.000 0.00 0.00 0.00 2.12
2153 3941 5.416947 CCCGCTTATGTCACCCTATTATAC 58.583 45.833 0.00 0.00 0.00 1.47
2154 3942 4.081309 GCCCGCTTATGTCACCCTATTATA 60.081 45.833 0.00 0.00 0.00 0.98
2155 3943 3.307480 GCCCGCTTATGTCACCCTATTAT 60.307 47.826 0.00 0.00 0.00 1.28
2156 3944 2.038033 GCCCGCTTATGTCACCCTATTA 59.962 50.000 0.00 0.00 0.00 0.98
2157 3945 1.202770 GCCCGCTTATGTCACCCTATT 60.203 52.381 0.00 0.00 0.00 1.73
2158 3946 0.396811 GCCCGCTTATGTCACCCTAT 59.603 55.000 0.00 0.00 0.00 2.57
2159 3947 0.689745 AGCCCGCTTATGTCACCCTA 60.690 55.000 0.00 0.00 0.00 3.53
2160 3948 0.689745 TAGCCCGCTTATGTCACCCT 60.690 55.000 0.00 0.00 0.00 4.34
2161 3949 0.396811 ATAGCCCGCTTATGTCACCC 59.603 55.000 0.00 0.00 0.00 4.61
2162 3950 3.326747 CTTATAGCCCGCTTATGTCACC 58.673 50.000 0.00 0.00 0.00 4.02
2163 3951 3.326747 CCTTATAGCCCGCTTATGTCAC 58.673 50.000 0.00 0.00 0.00 3.67
2164 3952 2.301870 CCCTTATAGCCCGCTTATGTCA 59.698 50.000 0.00 0.00 0.00 3.58
2165 3953 2.302157 ACCCTTATAGCCCGCTTATGTC 59.698 50.000 0.00 0.00 0.00 3.06
2166 3954 2.335933 ACCCTTATAGCCCGCTTATGT 58.664 47.619 0.00 0.00 0.00 2.29
2167 3955 3.074412 CAACCCTTATAGCCCGCTTATG 58.926 50.000 0.00 0.00 0.00 1.90
2168 3956 2.709397 ACAACCCTTATAGCCCGCTTAT 59.291 45.455 0.00 0.00 0.00 1.73
2169 3957 2.103601 GACAACCCTTATAGCCCGCTTA 59.896 50.000 0.00 0.00 0.00 3.09
2170 3958 0.916809 ACAACCCTTATAGCCCGCTT 59.083 50.000 0.00 0.00 0.00 4.68
2171 3959 0.468648 GACAACCCTTATAGCCCGCT 59.531 55.000 0.00 0.00 0.00 5.52
2172 3960 0.179468 TGACAACCCTTATAGCCCGC 59.821 55.000 0.00 0.00 0.00 6.13
2173 3961 1.474498 GGTGACAACCCTTATAGCCCG 60.474 57.143 0.00 0.00 41.04 6.13
2174 3962 2.343484 GGTGACAACCCTTATAGCCC 57.657 55.000 0.00 0.00 41.04 5.19
2185 3973 7.281774 ACATCATCATAAATCAGAGGTGACAAC 59.718 37.037 0.00 0.00 34.75 3.32
2186 3974 7.281549 CACATCATCATAAATCAGAGGTGACAA 59.718 37.037 0.00 0.00 41.83 3.18
2187 3975 6.764560 CACATCATCATAAATCAGAGGTGACA 59.235 38.462 0.00 0.00 41.83 3.58
2188 3976 6.204301 CCACATCATCATAAATCAGAGGTGAC 59.796 42.308 7.04 0.00 41.83 3.67
2189 3977 6.100134 TCCACATCATCATAAATCAGAGGTGA 59.900 38.462 7.04 0.00 41.83 4.02
2190 3978 6.293698 TCCACATCATCATAAATCAGAGGTG 58.706 40.000 0.00 0.00 39.78 4.00
2191 3979 6.465464 CCTCCACATCATCATAAATCAGAGGT 60.465 42.308 0.00 0.00 33.02 3.85
2192 3980 5.938710 CCTCCACATCATCATAAATCAGAGG 59.061 44.000 0.00 0.00 0.00 3.69
2193 3981 6.766429 TCCTCCACATCATCATAAATCAGAG 58.234 40.000 0.00 0.00 0.00 3.35
2194 3982 6.556116 TCTCCTCCACATCATCATAAATCAGA 59.444 38.462 0.00 0.00 0.00 3.27
2195 3983 6.766429 TCTCCTCCACATCATCATAAATCAG 58.234 40.000 0.00 0.00 0.00 2.90
2196 3984 6.556116 TCTCTCCTCCACATCATCATAAATCA 59.444 38.462 0.00 0.00 0.00 2.57
2197 3985 7.002250 TCTCTCCTCCACATCATCATAAATC 57.998 40.000 0.00 0.00 0.00 2.17
2198 3986 6.013553 CCTCTCTCCTCCACATCATCATAAAT 60.014 42.308 0.00 0.00 0.00 1.40
2199 3987 5.306419 CCTCTCTCCTCCACATCATCATAAA 59.694 44.000 0.00 0.00 0.00 1.40
2200 3988 4.837298 CCTCTCTCCTCCACATCATCATAA 59.163 45.833 0.00 0.00 0.00 1.90
2201 3989 4.106987 TCCTCTCTCCTCCACATCATCATA 59.893 45.833 0.00 0.00 0.00 2.15
2202 3990 3.116823 TCCTCTCTCCTCCACATCATCAT 60.117 47.826 0.00 0.00 0.00 2.45
2203 3991 2.245806 TCCTCTCTCCTCCACATCATCA 59.754 50.000 0.00 0.00 0.00 3.07
2204 3992 2.892852 CTCCTCTCTCCTCCACATCATC 59.107 54.545 0.00 0.00 0.00 2.92
2205 3993 2.517553 TCTCCTCTCTCCTCCACATCAT 59.482 50.000 0.00 0.00 0.00 2.45
2206 3994 1.925959 TCTCCTCTCTCCTCCACATCA 59.074 52.381 0.00 0.00 0.00 3.07
2207 3995 2.586425 CTCTCCTCTCTCCTCCACATC 58.414 57.143 0.00 0.00 0.00 3.06
2208 3996 1.217689 CCTCTCCTCTCTCCTCCACAT 59.782 57.143 0.00 0.00 0.00 3.21
2209 3997 0.628522 CCTCTCCTCTCTCCTCCACA 59.371 60.000 0.00 0.00 0.00 4.17
2210 3998 0.923358 TCCTCTCCTCTCTCCTCCAC 59.077 60.000 0.00 0.00 0.00 4.02
2211 3999 1.221635 CTCCTCTCCTCTCTCCTCCA 58.778 60.000 0.00 0.00 0.00 3.86
2212 4000 1.421646 CTCTCCTCTCCTCTCTCCTCC 59.578 61.905 0.00 0.00 0.00 4.30
2213 4001 2.370189 CTCTCTCCTCTCCTCTCTCCTC 59.630 59.091 0.00 0.00 0.00 3.71
2214 4002 2.022035 TCTCTCTCCTCTCCTCTCTCCT 60.022 54.545 0.00 0.00 0.00 3.69
2215 4003 2.408565 TCTCTCTCCTCTCCTCTCTCC 58.591 57.143 0.00 0.00 0.00 3.71
2216 4004 3.711704 TCTTCTCTCTCCTCTCCTCTCTC 59.288 52.174 0.00 0.00 0.00 3.20
2217 4005 3.713764 CTCTTCTCTCTCCTCTCCTCTCT 59.286 52.174 0.00 0.00 0.00 3.10
2218 4006 3.181450 CCTCTTCTCTCTCCTCTCCTCTC 60.181 56.522 0.00 0.00 0.00 3.20
2219 4007 2.780010 CCTCTTCTCTCTCCTCTCCTCT 59.220 54.545 0.00 0.00 0.00 3.69
2220 4008 2.158608 CCCTCTTCTCTCTCCTCTCCTC 60.159 59.091 0.00 0.00 0.00 3.71
2221 4009 1.852965 CCCTCTTCTCTCTCCTCTCCT 59.147 57.143 0.00 0.00 0.00 3.69
2222 4010 1.133482 CCCCTCTTCTCTCTCCTCTCC 60.133 61.905 0.00 0.00 0.00 3.71
2223 4011 1.569072 ACCCCTCTTCTCTCTCCTCTC 59.431 57.143 0.00 0.00 0.00 3.20
2224 4012 1.287739 CACCCCTCTTCTCTCTCCTCT 59.712 57.143 0.00 0.00 0.00 3.69
2225 4013 1.687996 CCACCCCTCTTCTCTCTCCTC 60.688 61.905 0.00 0.00 0.00 3.71
2226 4014 0.338120 CCACCCCTCTTCTCTCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
2227 4015 0.336737 TCCACCCCTCTTCTCTCTCC 59.663 60.000 0.00 0.00 0.00 3.71
2228 4016 1.480789 GTCCACCCCTCTTCTCTCTC 58.519 60.000 0.00 0.00 0.00 3.20
2229 4017 0.041982 GGTCCACCCCTCTTCTCTCT 59.958 60.000 0.00 0.00 0.00 3.10
2230 4018 1.324005 CGGTCCACCCCTCTTCTCTC 61.324 65.000 0.00 0.00 0.00 3.20
2231 4019 1.305381 CGGTCCACCCCTCTTCTCT 60.305 63.158 0.00 0.00 0.00 3.10
2232 4020 0.324091 TACGGTCCACCCCTCTTCTC 60.324 60.000 0.00 0.00 0.00 2.87
2233 4021 0.115745 TTACGGTCCACCCCTCTTCT 59.884 55.000 0.00 0.00 0.00 2.85
2234 4022 0.978907 TTTACGGTCCACCCCTCTTC 59.021 55.000 0.00 0.00 0.00 2.87
2235 4023 0.689055 GTTTACGGTCCACCCCTCTT 59.311 55.000 0.00 0.00 0.00 2.85
2236 4024 0.178912 AGTTTACGGTCCACCCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
2237 4025 0.689055 AAGTTTACGGTCCACCCCTC 59.311 55.000 0.00 0.00 0.00 4.30
2238 4026 0.399075 CAAGTTTACGGTCCACCCCT 59.601 55.000 0.00 0.00 0.00 4.79
2239 4027 0.109153 ACAAGTTTACGGTCCACCCC 59.891 55.000 0.00 0.00 0.00 4.95
2240 4028 2.037641 ACTACAAGTTTACGGTCCACCC 59.962 50.000 0.00 0.00 0.00 4.61
2241 4029 3.243839 TGACTACAAGTTTACGGTCCACC 60.244 47.826 0.00 0.00 0.00 4.61
2242 4030 3.981211 TGACTACAAGTTTACGGTCCAC 58.019 45.455 0.00 0.00 0.00 4.02
2243 4031 3.553508 GCTGACTACAAGTTTACGGTCCA 60.554 47.826 0.00 0.00 0.00 4.02
2244 4032 2.991866 GCTGACTACAAGTTTACGGTCC 59.008 50.000 0.00 0.00 0.00 4.46
2245 4033 3.673809 CAGCTGACTACAAGTTTACGGTC 59.326 47.826 8.42 0.00 0.00 4.79
2246 4034 3.650139 CAGCTGACTACAAGTTTACGGT 58.350 45.455 8.42 0.00 0.00 4.83
2247 4035 2.412089 GCAGCTGACTACAAGTTTACGG 59.588 50.000 20.43 0.00 0.00 4.02
2248 4036 3.057019 TGCAGCTGACTACAAGTTTACG 58.943 45.455 20.43 0.00 0.00 3.18
2249 4037 3.120511 GCTGCAGCTGACTACAAGTTTAC 60.121 47.826 31.33 0.00 38.21 2.01
2250 4038 3.067106 GCTGCAGCTGACTACAAGTTTA 58.933 45.455 31.33 0.00 38.21 2.01
2251 4039 1.876156 GCTGCAGCTGACTACAAGTTT 59.124 47.619 31.33 0.00 38.21 2.66
2252 4040 1.202687 TGCTGCAGCTGACTACAAGTT 60.203 47.619 36.61 0.00 42.66 2.66
2253 4041 0.394192 TGCTGCAGCTGACTACAAGT 59.606 50.000 36.61 0.00 42.66 3.16
2254 4042 0.795085 GTGCTGCAGCTGACTACAAG 59.205 55.000 36.61 5.31 42.66 3.16
2255 4043 0.945743 CGTGCTGCAGCTGACTACAA 60.946 55.000 36.61 13.65 42.66 2.41
2256 4044 1.373371 CGTGCTGCAGCTGACTACA 60.373 57.895 36.61 14.44 42.66 2.74
2257 4045 1.075425 CTCGTGCTGCAGCTGACTAC 61.075 60.000 36.61 25.08 42.66 2.73
2258 4046 1.213799 CTCGTGCTGCAGCTGACTA 59.786 57.895 36.61 19.63 42.66 2.59
2259 4047 2.048409 CTCGTGCTGCAGCTGACT 60.048 61.111 36.61 0.00 42.66 3.41
2260 4048 3.786586 GCTCGTGCTGCAGCTGAC 61.787 66.667 36.61 26.48 42.66 3.51
2270 4058 1.160329 AAGTGTGTTGGAGCTCGTGC 61.160 55.000 7.83 0.07 40.05 5.34
2271 4059 1.003545 CAAAGTGTGTTGGAGCTCGTG 60.004 52.381 7.83 0.00 0.00 4.35
2272 4060 1.299541 CAAAGTGTGTTGGAGCTCGT 58.700 50.000 7.83 0.00 0.00 4.18
2273 4061 1.003545 CACAAAGTGTGTTGGAGCTCG 60.004 52.381 7.83 0.00 43.08 5.03
2274 4062 2.763249 CACAAAGTGTGTTGGAGCTC 57.237 50.000 4.71 4.71 43.08 4.09
2298 4086 5.071653 AGTTAATGCTTGACCCCACATTTTT 59.928 36.000 0.00 0.00 34.69 1.94
2299 4087 4.592778 AGTTAATGCTTGACCCCACATTTT 59.407 37.500 0.00 0.00 34.69 1.82
2300 4088 4.159557 AGTTAATGCTTGACCCCACATTT 58.840 39.130 0.00 0.00 34.69 2.32
2301 4089 3.778265 AGTTAATGCTTGACCCCACATT 58.222 40.909 0.00 0.00 36.70 2.71
2302 4090 3.456380 AGTTAATGCTTGACCCCACAT 57.544 42.857 0.00 0.00 0.00 3.21
2303 4091 2.969821 AGTTAATGCTTGACCCCACA 57.030 45.000 0.00 0.00 0.00 4.17
2304 4092 3.014623 GGTAGTTAATGCTTGACCCCAC 58.985 50.000 0.00 0.00 0.00 4.61
2305 4093 2.916934 AGGTAGTTAATGCTTGACCCCA 59.083 45.455 0.00 0.00 0.00 4.96
2306 4094 3.646736 AGGTAGTTAATGCTTGACCCC 57.353 47.619 0.00 0.00 0.00 4.95
2307 4095 6.120220 ACAATAGGTAGTTAATGCTTGACCC 58.880 40.000 0.00 0.00 0.00 4.46
2308 4096 7.625828 AACAATAGGTAGTTAATGCTTGACC 57.374 36.000 0.00 0.00 0.00 4.02
2309 4097 9.595823 TCTAACAATAGGTAGTTAATGCTTGAC 57.404 33.333 0.00 0.00 30.57 3.18
2310 4098 9.817809 CTCTAACAATAGGTAGTTAATGCTTGA 57.182 33.333 0.00 0.00 30.57 3.02
2311 4099 9.817809 TCTCTAACAATAGGTAGTTAATGCTTG 57.182 33.333 0.00 0.00 30.57 4.01
2312 4100 9.819267 GTCTCTAACAATAGGTAGTTAATGCTT 57.181 33.333 0.00 0.00 30.57 3.91
2313 4101 8.978472 TGTCTCTAACAATAGGTAGTTAATGCT 58.022 33.333 0.00 0.00 34.03 3.79
2314 4102 9.250624 CTGTCTCTAACAATAGGTAGTTAATGC 57.749 37.037 0.00 0.00 37.45 3.56
2378 4166 3.944015 GCTCTATCTTTGTGCCACTTCAT 59.056 43.478 0.00 0.00 0.00 2.57
2382 4170 3.772025 ACTAGCTCTATCTTTGTGCCACT 59.228 43.478 0.00 0.00 0.00 4.00
2383 4171 4.130286 ACTAGCTCTATCTTTGTGCCAC 57.870 45.455 0.00 0.00 0.00 5.01
2455 4243 1.757306 CACCCTCTCTGGCTTGTGT 59.243 57.895 0.00 0.00 0.00 3.72
2456 4244 1.673665 GCACCCTCTCTGGCTTGTG 60.674 63.158 0.00 0.00 0.00 3.33
2466 4254 2.685017 TGCGGAGATGCACCCTCT 60.685 61.111 15.11 3.16 40.62 3.69
2479 4267 1.067495 GCTAGCTAGGGTTAGATGCGG 60.067 57.143 22.10 0.00 0.00 5.69
2500 4295 6.949715 GCTAGAGCCTAACTAGAGGTAGATA 58.050 44.000 3.04 0.00 39.48 1.98
2565 4360 0.551131 AGGGCTTTGGAGGGAGACAT 60.551 55.000 0.00 0.00 0.00 3.06
2633 4428 8.521176 GTGTACTTCACTACTTTTAGAGGATCA 58.479 37.037 0.00 0.00 43.13 2.92
2714 4511 7.336176 CCCTAATGGTAAACTCCACTACTTTTC 59.664 40.741 0.00 0.00 40.51 2.29
2809 6022 8.284693 CCAGAATTGCAAAGTTTAGGAAAATTG 58.715 33.333 1.71 0.00 0.00 2.32
2810 6023 7.992608 ACCAGAATTGCAAAGTTTAGGAAAATT 59.007 29.630 1.71 0.00 0.00 1.82
2967 6180 3.448093 TTGCTACATTTGGACCATCCA 57.552 42.857 0.00 0.00 46.61 3.41
2996 6209 5.821516 AGTGAGTCCTAGTTGTTCTATCG 57.178 43.478 0.00 0.00 0.00 2.92
3016 6229 0.756903 ACCACTGGCAACGTCTTAGT 59.243 50.000 0.00 0.00 42.51 2.24
3046 6259 6.060028 GTTCATGCTCAGTTACAACAAGAA 57.940 37.500 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.