Multiple sequence alignment - TraesCS1B01G025300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G025300 | chr1B | 100.000 | 2243 | 0 | 0 | 1 | 2243 | 12374717 | 12372475 | 0.000000e+00 | 4143.0 |
1 | TraesCS1B01G025300 | chr1B | 91.047 | 1251 | 89 | 14 | 177 | 1411 | 12499732 | 12500975 | 0.000000e+00 | 1668.0 |
2 | TraesCS1B01G025300 | chr1B | 91.047 | 1251 | 89 | 14 | 177 | 1411 | 12569923 | 12571166 | 0.000000e+00 | 1668.0 |
3 | TraesCS1B01G025300 | chr1B | 89.049 | 1251 | 105 | 18 | 177 | 1414 | 13013258 | 13014489 | 0.000000e+00 | 1522.0 |
4 | TraesCS1B01G025300 | chr1B | 88.720 | 1250 | 111 | 16 | 177 | 1414 | 13500669 | 13501900 | 0.000000e+00 | 1500.0 |
5 | TraesCS1B01G025300 | chr1B | 94.167 | 120 | 6 | 1 | 1293 | 1411 | 12572404 | 12572523 | 4.920000e-42 | 182.0 |
6 | TraesCS1B01G025300 | chr1A | 87.039 | 1057 | 118 | 8 | 372 | 1414 | 10708868 | 10709919 | 0.000000e+00 | 1175.0 |
7 | TraesCS1B01G025300 | chr1D | 86.969 | 706 | 77 | 9 | 711 | 1414 | 9418006 | 9418698 | 0.000000e+00 | 780.0 |
8 | TraesCS1B01G025300 | chr1D | 87.697 | 634 | 73 | 4 | 1412 | 2042 | 9418726 | 9419357 | 0.000000e+00 | 734.0 |
9 | TraesCS1B01G025300 | chr1D | 81.726 | 591 | 94 | 10 | 1450 | 2032 | 9432959 | 9433543 | 4.330000e-132 | 481.0 |
10 | TraesCS1B01G025300 | chr1D | 86.420 | 243 | 26 | 4 | 417 | 658 | 9414626 | 9414862 | 2.210000e-65 | 259.0 |
11 | TraesCS1B01G025300 | chr2D | 85.000 | 60 | 7 | 2 | 1613 | 1671 | 617044395 | 617044337 | 2.410000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G025300 | chr1B | 12372475 | 12374717 | 2242 | True | 4143 | 4143 | 100.000000 | 1 | 2243 | 1 | chr1B.!!$R1 | 2242 |
1 | TraesCS1B01G025300 | chr1B | 12499732 | 12500975 | 1243 | False | 1668 | 1668 | 91.047000 | 177 | 1411 | 1 | chr1B.!!$F1 | 1234 |
2 | TraesCS1B01G025300 | chr1B | 13013258 | 13014489 | 1231 | False | 1522 | 1522 | 89.049000 | 177 | 1414 | 1 | chr1B.!!$F2 | 1237 |
3 | TraesCS1B01G025300 | chr1B | 13500669 | 13501900 | 1231 | False | 1500 | 1500 | 88.720000 | 177 | 1414 | 1 | chr1B.!!$F3 | 1237 |
4 | TraesCS1B01G025300 | chr1B | 12569923 | 12572523 | 2600 | False | 925 | 1668 | 92.607000 | 177 | 1411 | 2 | chr1B.!!$F4 | 1234 |
5 | TraesCS1B01G025300 | chr1A | 10708868 | 10709919 | 1051 | False | 1175 | 1175 | 87.039000 | 372 | 1414 | 1 | chr1A.!!$F1 | 1042 |
6 | TraesCS1B01G025300 | chr1D | 9414626 | 9419357 | 4731 | False | 591 | 780 | 87.028667 | 417 | 2042 | 3 | chr1D.!!$F2 | 1625 |
7 | TraesCS1B01G025300 | chr1D | 9432959 | 9433543 | 584 | False | 481 | 481 | 81.726000 | 1450 | 2032 | 1 | chr1D.!!$F1 | 582 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
74 | 75 | 0.036765 | AAAGTGAGGCGCCATTCGTA | 60.037 | 50.0 | 31.54 | 4.58 | 41.07 | 3.43 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2042 | 6551 | 0.031043 | TACCAATATCGGTGCGGACG | 59.969 | 55.0 | 0.0 | 0.0 | 40.39 | 4.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 4.327982 | CATATGGACCACGATCTGAGTT | 57.672 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
22 | 23 | 4.697514 | CATATGGACCACGATCTGAGTTT | 58.302 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
23 | 24 | 2.455674 | TGGACCACGATCTGAGTTTG | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
24 | 25 | 1.691976 | TGGACCACGATCTGAGTTTGT | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
25 | 26 | 2.104111 | TGGACCACGATCTGAGTTTGTT | 59.896 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
26 | 27 | 2.737252 | GGACCACGATCTGAGTTTGTTC | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
27 | 28 | 2.404215 | ACCACGATCTGAGTTTGTTCG | 58.596 | 47.619 | 0.00 | 0.00 | 35.99 | 3.95 |
28 | 29 | 1.726791 | CCACGATCTGAGTTTGTTCGG | 59.273 | 52.381 | 0.00 | 0.00 | 34.28 | 4.30 |
29 | 30 | 2.609491 | CCACGATCTGAGTTTGTTCGGA | 60.609 | 50.000 | 0.00 | 0.00 | 36.92 | 4.55 |
30 | 31 | 2.663602 | CACGATCTGAGTTTGTTCGGAG | 59.336 | 50.000 | 0.00 | 0.00 | 36.01 | 4.63 |
31 | 32 | 1.656095 | CGATCTGAGTTTGTTCGGAGC | 59.344 | 52.381 | 0.00 | 0.00 | 36.01 | 4.70 |
32 | 33 | 2.672478 | CGATCTGAGTTTGTTCGGAGCT | 60.672 | 50.000 | 0.00 | 0.00 | 36.87 | 4.09 |
33 | 34 | 3.427638 | CGATCTGAGTTTGTTCGGAGCTA | 60.428 | 47.826 | 0.00 | 0.00 | 36.87 | 3.32 |
34 | 35 | 3.299340 | TCTGAGTTTGTTCGGAGCTAC | 57.701 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
35 | 36 | 1.986378 | CTGAGTTTGTTCGGAGCTACG | 59.014 | 52.381 | 13.63 | 13.63 | 0.00 | 3.51 |
36 | 37 | 1.336517 | TGAGTTTGTTCGGAGCTACGG | 60.337 | 52.381 | 20.39 | 0.00 | 0.00 | 4.02 |
37 | 38 | 0.677842 | AGTTTGTTCGGAGCTACGGT | 59.322 | 50.000 | 20.39 | 0.00 | 0.00 | 4.83 |
38 | 39 | 1.888512 | AGTTTGTTCGGAGCTACGGTA | 59.111 | 47.619 | 20.39 | 3.96 | 0.00 | 4.02 |
39 | 40 | 2.494870 | AGTTTGTTCGGAGCTACGGTAT | 59.505 | 45.455 | 20.39 | 0.00 | 0.00 | 2.73 |
40 | 41 | 2.572191 | TTGTTCGGAGCTACGGTATG | 57.428 | 50.000 | 20.39 | 0.00 | 0.00 | 2.39 |
41 | 42 | 1.466856 | TGTTCGGAGCTACGGTATGT | 58.533 | 50.000 | 20.39 | 0.00 | 0.00 | 2.29 |
42 | 43 | 1.133598 | TGTTCGGAGCTACGGTATGTG | 59.866 | 52.381 | 20.39 | 0.00 | 0.00 | 3.21 |
43 | 44 | 0.101759 | TTCGGAGCTACGGTATGTGC | 59.898 | 55.000 | 20.39 | 0.00 | 0.00 | 4.57 |
44 | 45 | 1.299926 | CGGAGCTACGGTATGTGCC | 60.300 | 63.158 | 11.59 | 0.00 | 0.00 | 5.01 |
45 | 46 | 1.069258 | GGAGCTACGGTATGTGCCC | 59.931 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
51 | 52 | 2.901813 | CGGTATGTGCCCGGGTTA | 59.098 | 61.111 | 24.63 | 9.20 | 41.78 | 2.85 |
52 | 53 | 1.221293 | CGGTATGTGCCCGGGTTAA | 59.779 | 57.895 | 24.63 | 8.10 | 41.78 | 2.01 |
53 | 54 | 0.812412 | CGGTATGTGCCCGGGTTAAG | 60.812 | 60.000 | 24.63 | 1.87 | 41.78 | 1.85 |
54 | 55 | 0.542805 | GGTATGTGCCCGGGTTAAGA | 59.457 | 55.000 | 24.63 | 7.35 | 0.00 | 2.10 |
55 | 56 | 1.065272 | GGTATGTGCCCGGGTTAAGAA | 60.065 | 52.381 | 24.63 | 2.36 | 0.00 | 2.52 |
56 | 57 | 2.618559 | GGTATGTGCCCGGGTTAAGAAA | 60.619 | 50.000 | 24.63 | 1.16 | 0.00 | 2.52 |
57 | 58 | 2.296073 | ATGTGCCCGGGTTAAGAAAA | 57.704 | 45.000 | 24.63 | 0.00 | 0.00 | 2.29 |
58 | 59 | 1.611519 | TGTGCCCGGGTTAAGAAAAG | 58.388 | 50.000 | 24.63 | 0.00 | 0.00 | 2.27 |
59 | 60 | 1.133730 | TGTGCCCGGGTTAAGAAAAGT | 60.134 | 47.619 | 24.63 | 0.00 | 0.00 | 2.66 |
60 | 61 | 1.268625 | GTGCCCGGGTTAAGAAAAGTG | 59.731 | 52.381 | 24.63 | 0.00 | 0.00 | 3.16 |
61 | 62 | 1.143277 | TGCCCGGGTTAAGAAAAGTGA | 59.857 | 47.619 | 24.63 | 0.00 | 0.00 | 3.41 |
62 | 63 | 1.810755 | GCCCGGGTTAAGAAAAGTGAG | 59.189 | 52.381 | 24.63 | 0.00 | 0.00 | 3.51 |
63 | 64 | 2.433436 | CCCGGGTTAAGAAAAGTGAGG | 58.567 | 52.381 | 14.18 | 0.00 | 0.00 | 3.86 |
64 | 65 | 1.810755 | CCGGGTTAAGAAAAGTGAGGC | 59.189 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
65 | 66 | 1.463444 | CGGGTTAAGAAAAGTGAGGCG | 59.537 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
66 | 67 | 1.199327 | GGGTTAAGAAAAGTGAGGCGC | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
67 | 68 | 1.199327 | GGTTAAGAAAAGTGAGGCGCC | 59.801 | 52.381 | 21.89 | 21.89 | 0.00 | 6.53 |
68 | 69 | 1.877443 | GTTAAGAAAAGTGAGGCGCCA | 59.123 | 47.619 | 31.54 | 5.56 | 0.00 | 5.69 |
69 | 70 | 2.488153 | GTTAAGAAAAGTGAGGCGCCAT | 59.512 | 45.455 | 31.54 | 14.28 | 0.00 | 4.40 |
70 | 71 | 1.620822 | AAGAAAAGTGAGGCGCCATT | 58.379 | 45.000 | 31.54 | 14.78 | 0.00 | 3.16 |
71 | 72 | 1.168714 | AGAAAAGTGAGGCGCCATTC | 58.831 | 50.000 | 31.54 | 19.45 | 0.00 | 2.67 |
72 | 73 | 0.179189 | GAAAAGTGAGGCGCCATTCG | 60.179 | 55.000 | 31.54 | 0.00 | 42.12 | 3.34 |
73 | 74 | 0.889186 | AAAAGTGAGGCGCCATTCGT | 60.889 | 50.000 | 31.54 | 7.13 | 41.07 | 3.85 |
74 | 75 | 0.036765 | AAAGTGAGGCGCCATTCGTA | 60.037 | 50.000 | 31.54 | 4.58 | 41.07 | 3.43 |
75 | 76 | 0.460284 | AAGTGAGGCGCCATTCGTAG | 60.460 | 55.000 | 31.54 | 0.00 | 41.07 | 3.51 |
76 | 77 | 1.883084 | GTGAGGCGCCATTCGTAGG | 60.883 | 63.158 | 31.54 | 0.00 | 41.07 | 3.18 |
87 | 88 | 2.571757 | TCGTAGGCGAGGCAGTTG | 59.428 | 61.111 | 0.00 | 0.00 | 42.81 | 3.16 |
88 | 89 | 2.261671 | CGTAGGCGAGGCAGTTGT | 59.738 | 61.111 | 0.00 | 0.00 | 41.33 | 3.32 |
89 | 90 | 1.805945 | CGTAGGCGAGGCAGTTGTC | 60.806 | 63.158 | 0.00 | 0.00 | 41.33 | 3.18 |
90 | 91 | 1.805945 | GTAGGCGAGGCAGTTGTCG | 60.806 | 63.158 | 0.00 | 0.00 | 39.25 | 4.35 |
97 | 98 | 2.975799 | GGCAGTTGTCGCCGGAAA | 60.976 | 61.111 | 5.05 | 0.00 | 40.35 | 3.13 |
98 | 99 | 2.548295 | GGCAGTTGTCGCCGGAAAA | 61.548 | 57.895 | 5.05 | 0.00 | 40.35 | 2.29 |
99 | 100 | 1.357334 | GCAGTTGTCGCCGGAAAAA | 59.643 | 52.632 | 5.05 | 0.00 | 0.00 | 1.94 |
118 | 119 | 4.439253 | AAAATATAGTGCCCACCTCTCC | 57.561 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
119 | 120 | 3.352611 | AATATAGTGCCCACCTCTCCT | 57.647 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
120 | 121 | 2.868964 | TATAGTGCCCACCTCTCCTT | 57.131 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
121 | 122 | 1.501582 | ATAGTGCCCACCTCTCCTTC | 58.498 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
122 | 123 | 0.617820 | TAGTGCCCACCTCTCCTTCC | 60.618 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
123 | 124 | 2.206900 | TGCCCACCTCTCCTTCCA | 59.793 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
124 | 125 | 2.224159 | TGCCCACCTCTCCTTCCAC | 61.224 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
125 | 126 | 2.972819 | GCCCACCTCTCCTTCCACC | 61.973 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
126 | 127 | 1.229658 | CCCACCTCTCCTTCCACCT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
127 | 128 | 1.268283 | CCCACCTCTCCTTCCACCTC | 61.268 | 65.000 | 0.00 | 0.00 | 0.00 | 3.85 |
128 | 129 | 1.268283 | CCACCTCTCCTTCCACCTCC | 61.268 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
129 | 130 | 1.305381 | ACCTCTCCTTCCACCTCCG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
130 | 131 | 1.305381 | CCTCTCCTTCCACCTCCGT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.69 |
131 | 132 | 1.324005 | CCTCTCCTTCCACCTCCGTC | 61.324 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
132 | 133 | 1.305046 | TCTCCTTCCACCTCCGTCC | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
133 | 134 | 2.678934 | TCCTTCCACCTCCGTCCG | 60.679 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
134 | 135 | 2.678934 | CCTTCCACCTCCGTCCGA | 60.679 | 66.667 | 0.00 | 0.00 | 0.00 | 4.55 |
135 | 136 | 2.711922 | CCTTCCACCTCCGTCCGAG | 61.712 | 68.421 | 0.00 | 0.00 | 38.46 | 4.63 |
136 | 137 | 3.358076 | CTTCCACCTCCGTCCGAGC | 62.358 | 68.421 | 0.00 | 0.00 | 37.27 | 5.03 |
137 | 138 | 3.881019 | TTCCACCTCCGTCCGAGCT | 62.881 | 63.158 | 0.00 | 0.00 | 37.27 | 4.09 |
138 | 139 | 2.439701 | CCACCTCCGTCCGAGCTA | 60.440 | 66.667 | 0.00 | 0.00 | 37.27 | 3.32 |
139 | 140 | 2.482333 | CCACCTCCGTCCGAGCTAG | 61.482 | 68.421 | 0.00 | 0.00 | 37.27 | 3.42 |
140 | 141 | 1.749638 | CACCTCCGTCCGAGCTAGT | 60.750 | 63.158 | 0.00 | 0.00 | 37.27 | 2.57 |
141 | 142 | 1.749638 | ACCTCCGTCCGAGCTAGTG | 60.750 | 63.158 | 0.00 | 0.00 | 37.27 | 2.74 |
142 | 143 | 2.409651 | CTCCGTCCGAGCTAGTGC | 59.590 | 66.667 | 0.00 | 0.00 | 40.05 | 4.40 |
143 | 144 | 3.456431 | CTCCGTCCGAGCTAGTGCG | 62.456 | 68.421 | 0.00 | 0.00 | 45.42 | 5.34 |
144 | 145 | 3.506096 | CCGTCCGAGCTAGTGCGA | 61.506 | 66.667 | 7.76 | 0.00 | 45.42 | 5.10 |
145 | 146 | 2.023461 | CGTCCGAGCTAGTGCGAG | 59.977 | 66.667 | 7.76 | 0.08 | 45.42 | 5.03 |
146 | 147 | 2.461945 | CGTCCGAGCTAGTGCGAGA | 61.462 | 63.158 | 7.76 | 2.08 | 45.42 | 4.04 |
147 | 148 | 1.353804 | GTCCGAGCTAGTGCGAGAG | 59.646 | 63.158 | 7.76 | 0.00 | 45.42 | 3.20 |
148 | 149 | 1.090625 | GTCCGAGCTAGTGCGAGAGA | 61.091 | 60.000 | 7.76 | 0.00 | 45.42 | 3.10 |
149 | 150 | 0.179043 | TCCGAGCTAGTGCGAGAGAT | 60.179 | 55.000 | 7.76 | 0.00 | 45.42 | 2.75 |
150 | 151 | 1.070289 | TCCGAGCTAGTGCGAGAGATA | 59.930 | 52.381 | 7.76 | 0.00 | 45.42 | 1.98 |
151 | 152 | 2.080693 | CCGAGCTAGTGCGAGAGATAT | 58.919 | 52.381 | 7.76 | 0.00 | 45.42 | 1.63 |
152 | 153 | 2.159585 | CCGAGCTAGTGCGAGAGATATG | 60.160 | 54.545 | 7.76 | 0.00 | 45.42 | 1.78 |
153 | 154 | 2.159585 | CGAGCTAGTGCGAGAGATATGG | 60.160 | 54.545 | 0.00 | 0.00 | 45.42 | 2.74 |
154 | 155 | 2.817258 | GAGCTAGTGCGAGAGATATGGT | 59.183 | 50.000 | 0.00 | 0.00 | 45.42 | 3.55 |
155 | 156 | 3.226777 | AGCTAGTGCGAGAGATATGGTT | 58.773 | 45.455 | 0.00 | 0.00 | 45.42 | 3.67 |
156 | 157 | 3.254657 | AGCTAGTGCGAGAGATATGGTTC | 59.745 | 47.826 | 0.00 | 0.00 | 45.42 | 3.62 |
157 | 158 | 3.004839 | GCTAGTGCGAGAGATATGGTTCA | 59.995 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
158 | 159 | 4.321601 | GCTAGTGCGAGAGATATGGTTCAT | 60.322 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
159 | 160 | 4.250116 | AGTGCGAGAGATATGGTTCATC | 57.750 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
160 | 161 | 3.638627 | AGTGCGAGAGATATGGTTCATCA | 59.361 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
161 | 162 | 3.986572 | GTGCGAGAGATATGGTTCATCAG | 59.013 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
162 | 163 | 3.006217 | TGCGAGAGATATGGTTCATCAGG | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
163 | 164 | 3.616076 | GCGAGAGATATGGTTCATCAGGG | 60.616 | 52.174 | 0.00 | 0.00 | 0.00 | 4.45 |
164 | 165 | 3.576118 | CGAGAGATATGGTTCATCAGGGT | 59.424 | 47.826 | 0.00 | 0.00 | 0.00 | 4.34 |
165 | 166 | 4.039730 | CGAGAGATATGGTTCATCAGGGTT | 59.960 | 45.833 | 0.00 | 0.00 | 0.00 | 4.11 |
166 | 167 | 5.453903 | CGAGAGATATGGTTCATCAGGGTTT | 60.454 | 44.000 | 0.00 | 0.00 | 0.00 | 3.27 |
167 | 168 | 5.688807 | AGAGATATGGTTCATCAGGGTTTG | 58.311 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
168 | 169 | 5.192522 | AGAGATATGGTTCATCAGGGTTTGT | 59.807 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
169 | 170 | 5.440610 | AGATATGGTTCATCAGGGTTTGTC | 58.559 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
170 | 171 | 2.286365 | TGGTTCATCAGGGTTTGTCC | 57.714 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
171 | 172 | 1.780309 | TGGTTCATCAGGGTTTGTCCT | 59.220 | 47.619 | 0.00 | 0.00 | 37.71 | 3.85 |
172 | 173 | 2.983192 | TGGTTCATCAGGGTTTGTCCTA | 59.017 | 45.455 | 0.00 | 0.00 | 34.92 | 2.94 |
173 | 174 | 3.396276 | TGGTTCATCAGGGTTTGTCCTAA | 59.604 | 43.478 | 0.00 | 0.00 | 34.92 | 2.69 |
174 | 175 | 3.756963 | GGTTCATCAGGGTTTGTCCTAAC | 59.243 | 47.826 | 0.00 | 0.00 | 34.92 | 2.34 |
175 | 176 | 4.394729 | GTTCATCAGGGTTTGTCCTAACA | 58.605 | 43.478 | 0.00 | 0.00 | 34.92 | 2.41 |
213 | 214 | 1.925455 | CCATCAGGGGTCCACCAGT | 60.925 | 63.158 | 0.00 | 0.00 | 42.91 | 4.00 |
214 | 215 | 1.604378 | CATCAGGGGTCCACCAGTC | 59.396 | 63.158 | 0.00 | 0.00 | 42.91 | 3.51 |
221 | 222 | 1.633945 | GGGGTCCACCAGTCTTAACAT | 59.366 | 52.381 | 0.00 | 0.00 | 42.91 | 2.71 |
224 | 225 | 4.451900 | GGGTCCACCAGTCTTAACATATG | 58.548 | 47.826 | 0.00 | 0.00 | 39.85 | 1.78 |
228 | 229 | 4.163458 | TCCACCAGTCTTAACATATGGGAC | 59.837 | 45.833 | 7.80 | 9.41 | 35.26 | 4.46 |
237 | 238 | 1.342672 | ACATATGGGACGGTCCACCC | 61.343 | 60.000 | 27.32 | 12.65 | 45.74 | 4.61 |
250 | 251 | 0.836830 | TCCACCCGGTCCAACACATA | 60.837 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
272 | 273 | 8.489489 | ACATAAGACCAGAGTATCATGACAATT | 58.511 | 33.333 | 0.00 | 0.00 | 37.82 | 2.32 |
285 | 286 | 2.778299 | TGACAATTCCTACTGCACCAC | 58.222 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
286 | 287 | 2.084546 | GACAATTCCTACTGCACCACC | 58.915 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
305 | 306 | 0.249120 | CAATGCCTCCCACGACTACA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
311 | 312 | 1.254026 | CTCCCACGACTACAACCTCA | 58.746 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
338 | 339 | 1.070134 | TCACGGCTAAAACTGCAGACT | 59.930 | 47.619 | 23.35 | 3.66 | 0.00 | 3.24 |
346 | 347 | 0.320771 | AAACTGCAGACTAGCACCGG | 60.321 | 55.000 | 23.35 | 0.00 | 40.11 | 5.28 |
351 | 352 | 1.035932 | GCAGACTAGCACCGGGTCTA | 61.036 | 60.000 | 6.32 | 5.54 | 38.12 | 2.59 |
356 | 357 | 3.305619 | TAGCACCGGGTCTAGGCCA | 62.306 | 63.158 | 16.93 | 0.00 | 0.00 | 5.36 |
357 | 358 | 4.162690 | GCACCGGGTCTAGGCCAG | 62.163 | 72.222 | 16.93 | 11.70 | 0.00 | 4.85 |
360 | 361 | 1.076192 | ACCGGGTCTAGGCCAGTAG | 60.076 | 63.158 | 16.93 | 1.72 | 0.00 | 2.57 |
361 | 362 | 2.499827 | CCGGGTCTAGGCCAGTAGC | 61.500 | 68.421 | 16.93 | 0.00 | 42.60 | 3.58 |
375 | 376 | 0.983378 | AGTAGCCCTGTCCACCATCC | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
398 | 399 | 1.276421 | AGATGTCGTTCTGGACCCAAG | 59.724 | 52.381 | 0.00 | 0.00 | 36.07 | 3.61 |
415 | 416 | 2.290705 | CCAAGGAATCAACCTTACCCGT | 60.291 | 50.000 | 0.00 | 0.00 | 46.94 | 5.28 |
418 | 419 | 1.407851 | GGAATCAACCTTACCCGTCCC | 60.408 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
456 | 457 | 4.779113 | AGGCCACGACCTTAGCTA | 57.221 | 55.556 | 5.01 | 0.00 | 36.28 | 3.32 |
480 | 481 | 5.615925 | AATCTTCCCTAAATAGCTCACGT | 57.384 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
499 | 500 | 5.353123 | TCACGTGTAAATCCTGAAATAAGCC | 59.647 | 40.000 | 16.51 | 0.00 | 0.00 | 4.35 |
511 | 512 | 5.642063 | CCTGAAATAAGCCGAAAGAAGTACA | 59.358 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
525 | 526 | 9.907576 | CGAAAGAAGTACAAATGTTGATCTATC | 57.092 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
554 | 555 | 7.983166 | ACCTATTGGTATCACCTGTTACTAA | 57.017 | 36.000 | 0.00 | 0.00 | 46.43 | 2.24 |
555 | 556 | 8.562949 | ACCTATTGGTATCACCTGTTACTAAT | 57.437 | 34.615 | 0.00 | 9.02 | 46.43 | 1.73 |
607 | 612 | 5.596836 | AGAACTCCAAAATTTGAAGTGCA | 57.403 | 34.783 | 5.87 | 0.00 | 0.00 | 4.57 |
611 | 616 | 1.794116 | CCAAAATTTGAAGTGCAGCCG | 59.206 | 47.619 | 7.37 | 0.00 | 0.00 | 5.52 |
626 | 636 | 3.573967 | TGCAGCCGAGATAAGACATGATA | 59.426 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
633 | 643 | 5.066634 | CCGAGATAAGACATGATATAGCGGT | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 5.68 |
695 | 2684 | 3.470709 | GCAGCAGCCTTACTTATGATGA | 58.529 | 45.455 | 0.00 | 0.00 | 30.86 | 2.92 |
706 | 2695 | 8.254508 | GCCTTACTTATGATGAGTAGGATAAGG | 58.745 | 40.741 | 7.87 | 9.06 | 34.17 | 2.69 |
752 | 3853 | 4.979815 | CACACAATGCATGCCTATTGTATG | 59.020 | 41.667 | 26.78 | 23.82 | 43.53 | 2.39 |
839 | 3944 | 0.953727 | GCTTGTTGTCATGCTCACCA | 59.046 | 50.000 | 0.00 | 0.00 | 40.22 | 4.17 |
984 | 4094 | 3.257469 | TCTACAATTGGAGCTGCTCAG | 57.743 | 47.619 | 28.95 | 16.48 | 31.08 | 3.35 |
1188 | 4298 | 4.690719 | CACAACCCCTGGCGCGTA | 62.691 | 66.667 | 8.43 | 0.00 | 0.00 | 4.42 |
1280 | 4390 | 1.072331 | CGGGCAGGGCATCTTATTAGT | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
1298 | 5766 | 1.067495 | AGTTCCACGCAGAGCTAGTTC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
1358 | 5826 | 1.179152 | CATCCATGCTTGGTCTGCAA | 58.821 | 50.000 | 17.54 | 0.00 | 44.01 | 4.08 |
1418 | 5920 | 7.775053 | AGAAAATAAAGCACATACTTTCCCA | 57.225 | 32.000 | 0.00 | 0.00 | 40.32 | 4.37 |
1425 | 5927 | 0.390735 | ACATACTTTCCCACGTCGGC | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1441 | 5944 | 0.738389 | CGGCGGCTTCCACATTTATT | 59.262 | 50.000 | 7.61 | 0.00 | 0.00 | 1.40 |
1552 | 6055 | 9.967451 | TTATTTGGTATCCTAGTTGTTGATCAA | 57.033 | 29.630 | 3.38 | 3.38 | 0.00 | 2.57 |
1559 | 6062 | 9.788960 | GTATCCTAGTTGTTGATCAATTTTTCC | 57.211 | 33.333 | 12.12 | 0.00 | 38.38 | 3.13 |
1562 | 6065 | 8.522830 | TCCTAGTTGTTGATCAATTTTTCCATC | 58.477 | 33.333 | 12.12 | 3.29 | 38.38 | 3.51 |
1588 | 6092 | 8.504005 | CAACAAGTATAACACTACTGGGAAAAG | 58.496 | 37.037 | 0.00 | 0.00 | 36.04 | 2.27 |
1628 | 6132 | 7.573710 | TCAAATTAGTGGCAGGTATAGTCAAT | 58.426 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
1640 | 6144 | 1.855295 | TAGTCAATCACCCGCCACTA | 58.145 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1659 | 6163 | 6.374613 | GCCACTACTATTTTGGAAAAGTAGCT | 59.625 | 38.462 | 7.98 | 0.00 | 33.45 | 3.32 |
1664 | 6168 | 3.726291 | TTTTGGAAAAGTAGCTGTGGC | 57.274 | 42.857 | 0.00 | 0.00 | 39.06 | 5.01 |
1707 | 6212 | 5.300752 | CCACTGATCTTTTCACAGTAGTGT | 58.699 | 41.667 | 0.00 | 0.00 | 46.01 | 3.55 |
1731 | 6236 | 4.510038 | GGCAAAATATATGACCTGCCAG | 57.490 | 45.455 | 16.82 | 0.00 | 46.87 | 4.85 |
1811 | 6319 | 1.111277 | GTGCCCACTGGTTTGTCTTT | 58.889 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1819 | 6327 | 4.035675 | CCACTGGTTTGTCTTTCAAGAGTC | 59.964 | 45.833 | 0.00 | 0.00 | 37.35 | 3.36 |
1825 | 6333 | 0.038526 | GTCTTTCAAGAGTCGCGGGA | 60.039 | 55.000 | 6.13 | 0.00 | 35.32 | 5.14 |
1839 | 6347 | 3.845625 | CGGGAGAAAAATATGCCGC | 57.154 | 52.632 | 0.00 | 0.00 | 43.52 | 6.53 |
1840 | 6348 | 0.041312 | CGGGAGAAAAATATGCCGCG | 60.041 | 55.000 | 0.00 | 0.00 | 43.52 | 6.46 |
1841 | 6349 | 1.305201 | GGGAGAAAAATATGCCGCGA | 58.695 | 50.000 | 8.23 | 0.00 | 0.00 | 5.87 |
1842 | 6350 | 1.264288 | GGGAGAAAAATATGCCGCGAG | 59.736 | 52.381 | 8.23 | 0.00 | 0.00 | 5.03 |
1853 | 6362 | 3.876274 | ATGCCGCGAGATCAATACTAT | 57.124 | 42.857 | 8.23 | 0.00 | 0.00 | 2.12 |
1926 | 6435 | 3.128589 | GCGGTCACCACACATATCAAAAT | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
1930 | 6439 | 6.644592 | CGGTCACCACACATATCAAAATTTTT | 59.355 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
1934 | 6443 | 7.871973 | TCACCACACATATCAAAATTTTTCTGG | 59.128 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
1936 | 6445 | 7.160726 | CCACACATATCAAAATTTTTCTGGGT | 58.839 | 34.615 | 0.00 | 1.27 | 0.00 | 4.51 |
1938 | 6447 | 8.711457 | CACACATATCAAAATTTTTCTGGGTTC | 58.289 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
1943 | 6452 | 4.890581 | TCAAAATTTTTCTGGGTTCGGAGA | 59.109 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
1954 | 6463 | 1.295792 | GTTCGGAGATTTATGGCGCA | 58.704 | 50.000 | 10.83 | 0.00 | 35.04 | 6.09 |
1958 | 6467 | 1.603802 | CGGAGATTTATGGCGCACATT | 59.396 | 47.619 | 10.83 | 0.00 | 41.03 | 2.71 |
1965 | 6474 | 0.175989 | TATGGCGCACATTACCACGA | 59.824 | 50.000 | 10.83 | 0.00 | 41.03 | 4.35 |
1972 | 6481 | 1.376295 | ACATTACCACGAACGCCCC | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 5.80 |
2026 | 6535 | 2.807676 | ACTCAAATCGGCAAATCCCTT | 58.192 | 42.857 | 0.00 | 0.00 | 0.00 | 3.95 |
2035 | 6544 | 1.595093 | GCAAATCCCTTGTCCCACCG | 61.595 | 60.000 | 0.00 | 0.00 | 37.36 | 4.94 |
2038 | 6547 | 2.180159 | AATCCCTTGTCCCACCGTCG | 62.180 | 60.000 | 0.00 | 0.00 | 0.00 | 5.12 |
2039 | 6548 | 3.307906 | CCCTTGTCCCACCGTCGA | 61.308 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2041 | 6550 | 2.048503 | CTTGTCCCACCGTCGACC | 60.049 | 66.667 | 10.58 | 0.00 | 0.00 | 4.79 |
2042 | 6551 | 3.584868 | CTTGTCCCACCGTCGACCC | 62.585 | 68.421 | 10.58 | 0.00 | 0.00 | 4.46 |
2055 | 6564 | 3.520862 | GACCCGTCCGCACCGATA | 61.521 | 66.667 | 0.00 | 0.00 | 0.00 | 2.92 |
2056 | 6565 | 2.836360 | ACCCGTCCGCACCGATAT | 60.836 | 61.111 | 0.00 | 0.00 | 0.00 | 1.63 |
2057 | 6566 | 2.359570 | GACCCGTCCGCACCGATATT | 62.360 | 60.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2058 | 6567 | 1.954146 | CCCGTCCGCACCGATATTG | 60.954 | 63.158 | 0.00 | 0.00 | 0.00 | 1.90 |
2059 | 6568 | 1.954146 | CCGTCCGCACCGATATTGG | 60.954 | 63.158 | 7.52 | 7.52 | 0.00 | 3.16 |
2060 | 6569 | 1.227147 | CGTCCGCACCGATATTGGT | 60.227 | 57.895 | 9.03 | 9.03 | 45.21 | 3.67 |
2061 | 6570 | 0.031043 | CGTCCGCACCGATATTGGTA | 59.969 | 55.000 | 14.64 | 0.00 | 41.38 | 3.25 |
2062 | 6571 | 1.494824 | GTCCGCACCGATATTGGTAC | 58.505 | 55.000 | 14.64 | 8.30 | 41.38 | 3.34 |
2063 | 6572 | 0.031043 | TCCGCACCGATATTGGTACG | 59.969 | 55.000 | 23.13 | 23.13 | 46.14 | 3.67 |
2064 | 6573 | 0.249155 | CCGCACCGATATTGGTACGT | 60.249 | 55.000 | 26.29 | 0.00 | 45.33 | 3.57 |
2065 | 6574 | 1.126079 | CGCACCGATATTGGTACGTC | 58.874 | 55.000 | 22.15 | 8.93 | 42.53 | 4.34 |
2066 | 6575 | 1.268896 | CGCACCGATATTGGTACGTCT | 60.269 | 52.381 | 22.15 | 0.00 | 42.53 | 4.18 |
2067 | 6576 | 2.391879 | GCACCGATATTGGTACGTCTC | 58.608 | 52.381 | 14.64 | 0.00 | 41.38 | 3.36 |
2068 | 6577 | 2.034305 | GCACCGATATTGGTACGTCTCT | 59.966 | 50.000 | 14.64 | 0.00 | 41.38 | 3.10 |
2069 | 6578 | 3.852572 | GCACCGATATTGGTACGTCTCTC | 60.853 | 52.174 | 14.64 | 0.00 | 41.38 | 3.20 |
2070 | 6579 | 2.883386 | ACCGATATTGGTACGTCTCTCC | 59.117 | 50.000 | 13.42 | 0.00 | 41.55 | 3.71 |
2071 | 6580 | 2.228343 | CCGATATTGGTACGTCTCTCCC | 59.772 | 54.545 | 0.07 | 0.00 | 0.00 | 4.30 |
2072 | 6581 | 3.147629 | CGATATTGGTACGTCTCTCCCT | 58.852 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2073 | 6582 | 3.188873 | CGATATTGGTACGTCTCTCCCTC | 59.811 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
2074 | 6583 | 2.526888 | ATTGGTACGTCTCTCCCTCA | 57.473 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2075 | 6584 | 1.542492 | TTGGTACGTCTCTCCCTCAC | 58.458 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2076 | 6585 | 0.323178 | TGGTACGTCTCTCCCTCACC | 60.323 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2077 | 6586 | 0.034283 | GGTACGTCTCTCCCTCACCT | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2078 | 6587 | 1.381522 | GTACGTCTCTCCCTCACCTC | 58.618 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2079 | 6588 | 0.107800 | TACGTCTCTCCCTCACCTCG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2080 | 6589 | 1.377463 | CGTCTCTCCCTCACCTCGT | 60.377 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
2081 | 6590 | 1.370587 | CGTCTCTCCCTCACCTCGTC | 61.371 | 65.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2082 | 6591 | 1.033202 | GTCTCTCCCTCACCTCGTCC | 61.033 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2083 | 6592 | 1.755008 | CTCTCCCTCACCTCGTCCC | 60.755 | 68.421 | 0.00 | 0.00 | 0.00 | 4.46 |
2084 | 6593 | 2.760385 | CTCCCTCACCTCGTCCCC | 60.760 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
2085 | 6594 | 4.393778 | TCCCTCACCTCGTCCCCC | 62.394 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
2086 | 6595 | 4.715130 | CCCTCACCTCGTCCCCCA | 62.715 | 72.222 | 0.00 | 0.00 | 0.00 | 4.96 |
2087 | 6596 | 2.365635 | CCTCACCTCGTCCCCCAT | 60.366 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2088 | 6597 | 1.995626 | CCTCACCTCGTCCCCCATT | 60.996 | 63.158 | 0.00 | 0.00 | 0.00 | 3.16 |
2089 | 6598 | 1.221840 | CTCACCTCGTCCCCCATTG | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 2.82 |
2090 | 6599 | 1.229368 | TCACCTCGTCCCCCATTGA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
2091 | 6600 | 1.221840 | CACCTCGTCCCCCATTGAG | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
2092 | 6601 | 2.190578 | CCTCGTCCCCCATTGAGC | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
2093 | 6602 | 2.370445 | CCTCGTCCCCCATTGAGCT | 61.370 | 63.158 | 0.00 | 0.00 | 0.00 | 4.09 |
2094 | 6603 | 1.153289 | CTCGTCCCCCATTGAGCTG | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
2095 | 6604 | 1.903877 | CTCGTCCCCCATTGAGCTGT | 61.904 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2096 | 6605 | 1.002134 | CGTCCCCCATTGAGCTGTT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
2097 | 6606 | 0.609131 | CGTCCCCCATTGAGCTGTTT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2098 | 6607 | 0.890683 | GTCCCCCATTGAGCTGTTTG | 59.109 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2099 | 6608 | 0.899717 | TCCCCCATTGAGCTGTTTGC | 60.900 | 55.000 | 0.00 | 0.00 | 43.29 | 3.68 |
2100 | 6609 | 1.593265 | CCCCATTGAGCTGTTTGCC | 59.407 | 57.895 | 0.00 | 0.00 | 44.23 | 4.52 |
2101 | 6610 | 1.213537 | CCCATTGAGCTGTTTGCCG | 59.786 | 57.895 | 0.00 | 0.00 | 44.23 | 5.69 |
2102 | 6611 | 1.444895 | CCATTGAGCTGTTTGCCGC | 60.445 | 57.895 | 0.00 | 0.00 | 44.23 | 6.53 |
2103 | 6612 | 1.286570 | CATTGAGCTGTTTGCCGCA | 59.713 | 52.632 | 0.00 | 0.00 | 44.23 | 5.69 |
2104 | 6613 | 0.318869 | CATTGAGCTGTTTGCCGCAA | 60.319 | 50.000 | 0.38 | 0.38 | 44.23 | 4.85 |
2105 | 6614 | 0.318955 | ATTGAGCTGTTTGCCGCAAC | 60.319 | 50.000 | 4.98 | 2.17 | 44.23 | 4.17 |
2106 | 6615 | 2.050077 | GAGCTGTTTGCCGCAACC | 60.050 | 61.111 | 4.98 | 0.00 | 44.23 | 3.77 |
2107 | 6616 | 3.879351 | GAGCTGTTTGCCGCAACCG | 62.879 | 63.158 | 4.98 | 0.00 | 44.23 | 4.44 |
2109 | 6618 | 4.999939 | CTGTTTGCCGCAACCGCC | 63.000 | 66.667 | 4.98 | 0.00 | 33.11 | 6.13 |
2111 | 6620 | 4.999939 | GTTTGCCGCAACCGCCAG | 63.000 | 66.667 | 4.98 | 0.00 | 33.11 | 4.85 |
2128 | 6637 | 4.825252 | GGGTTACGACGCCGCCAT | 62.825 | 66.667 | 0.00 | 0.00 | 39.95 | 4.40 |
2129 | 6638 | 2.816520 | GGTTACGACGCCGCCATT | 60.817 | 61.111 | 0.00 | 0.00 | 39.95 | 3.16 |
2130 | 6639 | 2.398036 | GTTACGACGCCGCCATTG | 59.602 | 61.111 | 0.00 | 0.00 | 39.95 | 2.82 |
2131 | 6640 | 3.492545 | TTACGACGCCGCCATTGC | 61.493 | 61.111 | 0.00 | 0.00 | 39.95 | 3.56 |
2132 | 6641 | 3.943479 | TTACGACGCCGCCATTGCT | 62.943 | 57.895 | 0.00 | 0.00 | 39.95 | 3.91 |
2133 | 6642 | 2.560051 | TTACGACGCCGCCATTGCTA | 62.560 | 55.000 | 0.00 | 0.00 | 39.95 | 3.49 |
2134 | 6643 | 2.947118 | TACGACGCCGCCATTGCTAG | 62.947 | 60.000 | 0.00 | 0.00 | 39.95 | 3.42 |
2135 | 6644 | 3.272334 | GACGCCGCCATTGCTAGG | 61.272 | 66.667 | 0.00 | 0.00 | 34.43 | 3.02 |
2136 | 6645 | 4.856801 | ACGCCGCCATTGCTAGGG | 62.857 | 66.667 | 0.00 | 0.00 | 34.43 | 3.53 |
2137 | 6646 | 4.856801 | CGCCGCCATTGCTAGGGT | 62.857 | 66.667 | 0.00 | 0.00 | 34.43 | 4.34 |
2138 | 6647 | 2.440247 | GCCGCCATTGCTAGGGTT | 60.440 | 61.111 | 0.00 | 0.00 | 34.43 | 4.11 |
2139 | 6648 | 1.153046 | GCCGCCATTGCTAGGGTTA | 60.153 | 57.895 | 0.00 | 0.00 | 34.43 | 2.85 |
2140 | 6649 | 1.166531 | GCCGCCATTGCTAGGGTTAG | 61.167 | 60.000 | 0.00 | 0.00 | 34.43 | 2.34 |
2141 | 6650 | 0.535102 | CCGCCATTGCTAGGGTTAGG | 60.535 | 60.000 | 0.00 | 0.00 | 34.43 | 2.69 |
2142 | 6651 | 0.535102 | CGCCATTGCTAGGGTTAGGG | 60.535 | 60.000 | 0.00 | 0.00 | 34.43 | 3.53 |
2143 | 6652 | 0.823769 | GCCATTGCTAGGGTTAGGGC | 60.824 | 60.000 | 0.00 | 0.00 | 33.53 | 5.19 |
2144 | 6653 | 0.535102 | CCATTGCTAGGGTTAGGGCG | 60.535 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2145 | 6654 | 1.148498 | ATTGCTAGGGTTAGGGCGC | 59.852 | 57.895 | 0.00 | 0.00 | 0.00 | 6.53 |
2146 | 6655 | 2.339275 | ATTGCTAGGGTTAGGGCGCC | 62.339 | 60.000 | 21.18 | 21.18 | 0.00 | 6.53 |
2147 | 6656 | 4.603946 | GCTAGGGTTAGGGCGCCG | 62.604 | 72.222 | 22.54 | 3.77 | 0.00 | 6.46 |
2148 | 6657 | 2.836360 | CTAGGGTTAGGGCGCCGA | 60.836 | 66.667 | 22.54 | 8.19 | 0.00 | 5.54 |
2149 | 6658 | 2.123164 | TAGGGTTAGGGCGCCGAT | 60.123 | 61.111 | 22.54 | 14.64 | 0.00 | 4.18 |
2150 | 6659 | 2.436087 | CTAGGGTTAGGGCGCCGATG | 62.436 | 65.000 | 22.54 | 0.00 | 0.00 | 3.84 |
2151 | 6660 | 4.171103 | GGGTTAGGGCGCCGATGT | 62.171 | 66.667 | 22.54 | 7.45 | 0.00 | 3.06 |
2152 | 6661 | 2.588034 | GGTTAGGGCGCCGATGTC | 60.588 | 66.667 | 22.54 | 5.83 | 0.00 | 3.06 |
2153 | 6662 | 2.499685 | GTTAGGGCGCCGATGTCT | 59.500 | 61.111 | 22.54 | 14.11 | 0.00 | 3.41 |
2154 | 6663 | 1.591863 | GTTAGGGCGCCGATGTCTC | 60.592 | 63.158 | 22.54 | 4.09 | 0.00 | 3.36 |
2155 | 6664 | 2.792947 | TTAGGGCGCCGATGTCTCC | 61.793 | 63.158 | 22.54 | 3.21 | 0.00 | 3.71 |
2161 | 6670 | 3.896133 | GCCGATGTCTCCGCGGTA | 61.896 | 66.667 | 27.15 | 12.33 | 46.38 | 4.02 |
2162 | 6671 | 2.331805 | CCGATGTCTCCGCGGTAG | 59.668 | 66.667 | 27.15 | 20.47 | 40.17 | 3.18 |
2163 | 6672 | 2.478890 | CCGATGTCTCCGCGGTAGT | 61.479 | 63.158 | 27.15 | 8.04 | 40.17 | 2.73 |
2164 | 6673 | 1.162181 | CCGATGTCTCCGCGGTAGTA | 61.162 | 60.000 | 27.15 | 11.20 | 40.17 | 1.82 |
2165 | 6674 | 0.873054 | CGATGTCTCCGCGGTAGTAT | 59.127 | 55.000 | 27.15 | 15.64 | 0.00 | 2.12 |
2166 | 6675 | 1.399855 | CGATGTCTCCGCGGTAGTATG | 60.400 | 57.143 | 27.15 | 7.29 | 0.00 | 2.39 |
2167 | 6676 | 1.878088 | GATGTCTCCGCGGTAGTATGA | 59.122 | 52.381 | 27.15 | 11.76 | 0.00 | 2.15 |
2168 | 6677 | 1.306148 | TGTCTCCGCGGTAGTATGAG | 58.694 | 55.000 | 27.15 | 13.52 | 0.00 | 2.90 |
2169 | 6678 | 0.040246 | GTCTCCGCGGTAGTATGAGC | 60.040 | 60.000 | 27.15 | 5.79 | 0.00 | 4.26 |
2170 | 6679 | 0.179026 | TCTCCGCGGTAGTATGAGCT | 60.179 | 55.000 | 27.15 | 0.00 | 0.00 | 4.09 |
2171 | 6680 | 1.071228 | TCTCCGCGGTAGTATGAGCTA | 59.929 | 52.381 | 27.15 | 0.00 | 0.00 | 3.32 |
2172 | 6681 | 1.465387 | CTCCGCGGTAGTATGAGCTAG | 59.535 | 57.143 | 27.15 | 6.34 | 0.00 | 3.42 |
2173 | 6682 | 1.202734 | TCCGCGGTAGTATGAGCTAGT | 60.203 | 52.381 | 27.15 | 0.00 | 0.00 | 2.57 |
2174 | 6683 | 1.607628 | CCGCGGTAGTATGAGCTAGTT | 59.392 | 52.381 | 19.50 | 0.00 | 0.00 | 2.24 |
2175 | 6684 | 2.810274 | CCGCGGTAGTATGAGCTAGTTA | 59.190 | 50.000 | 19.50 | 0.00 | 0.00 | 2.24 |
2176 | 6685 | 3.251729 | CCGCGGTAGTATGAGCTAGTTAA | 59.748 | 47.826 | 19.50 | 0.00 | 0.00 | 2.01 |
2177 | 6686 | 4.261322 | CCGCGGTAGTATGAGCTAGTTAAA | 60.261 | 45.833 | 19.50 | 0.00 | 0.00 | 1.52 |
2178 | 6687 | 5.276270 | CGCGGTAGTATGAGCTAGTTAAAA | 58.724 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
2179 | 6688 | 5.745294 | CGCGGTAGTATGAGCTAGTTAAAAA | 59.255 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2180 | 6689 | 6.291479 | CGCGGTAGTATGAGCTAGTTAAAAAC | 60.291 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
2181 | 6690 | 6.019237 | GCGGTAGTATGAGCTAGTTAAAAACC | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 3.27 |
2182 | 6691 | 7.037438 | CGGTAGTATGAGCTAGTTAAAAACCA | 58.963 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
2183 | 6692 | 7.546667 | CGGTAGTATGAGCTAGTTAAAAACCAA | 59.453 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
2184 | 6693 | 9.223099 | GGTAGTATGAGCTAGTTAAAAACCAAA | 57.777 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
2206 | 6715 | 9.991388 | CCAAATTAATTATTGAGTTGCAATTGG | 57.009 | 29.630 | 0.59 | 3.27 | 44.68 | 3.16 |
2210 | 6719 | 8.984891 | TTAATTATTGAGTTGCAATTGGACTG | 57.015 | 30.769 | 0.59 | 0.00 | 44.68 | 3.51 |
2211 | 6720 | 6.594788 | ATTATTGAGTTGCAATTGGACTGT | 57.405 | 33.333 | 0.59 | 0.00 | 44.68 | 3.55 |
2212 | 6721 | 7.701539 | ATTATTGAGTTGCAATTGGACTGTA | 57.298 | 32.000 | 0.59 | 0.00 | 44.68 | 2.74 |
2213 | 6722 | 4.829064 | TTGAGTTGCAATTGGACTGTAC | 57.171 | 40.909 | 0.59 | 0.00 | 0.00 | 2.90 |
2214 | 6723 | 4.085357 | TGAGTTGCAATTGGACTGTACT | 57.915 | 40.909 | 0.59 | 4.60 | 0.00 | 2.73 |
2215 | 6724 | 5.222079 | TGAGTTGCAATTGGACTGTACTA | 57.778 | 39.130 | 0.59 | 0.00 | 0.00 | 1.82 |
2216 | 6725 | 5.616270 | TGAGTTGCAATTGGACTGTACTAA | 58.384 | 37.500 | 0.59 | 0.00 | 0.00 | 2.24 |
2217 | 6726 | 6.237901 | TGAGTTGCAATTGGACTGTACTAAT | 58.762 | 36.000 | 0.59 | 0.00 | 0.00 | 1.73 |
2218 | 6727 | 6.371548 | TGAGTTGCAATTGGACTGTACTAATC | 59.628 | 38.462 | 0.59 | 0.00 | 0.00 | 1.75 |
2219 | 6728 | 6.237901 | AGTTGCAATTGGACTGTACTAATCA | 58.762 | 36.000 | 0.59 | 0.00 | 0.00 | 2.57 |
2220 | 6729 | 6.372659 | AGTTGCAATTGGACTGTACTAATCAG | 59.627 | 38.462 | 0.59 | 0.00 | 38.68 | 2.90 |
2221 | 6730 | 5.804639 | TGCAATTGGACTGTACTAATCAGT | 58.195 | 37.500 | 7.72 | 0.00 | 46.86 | 3.41 |
2222 | 6731 | 6.237901 | TGCAATTGGACTGTACTAATCAGTT | 58.762 | 36.000 | 7.72 | 0.00 | 44.68 | 3.16 |
2223 | 6732 | 6.714810 | TGCAATTGGACTGTACTAATCAGTTT | 59.285 | 34.615 | 7.72 | 0.00 | 44.68 | 2.66 |
2224 | 6733 | 7.023575 | GCAATTGGACTGTACTAATCAGTTTG | 58.976 | 38.462 | 7.72 | 0.00 | 44.68 | 2.93 |
2225 | 6734 | 7.308589 | GCAATTGGACTGTACTAATCAGTTTGT | 60.309 | 37.037 | 7.72 | 0.00 | 44.68 | 2.83 |
2226 | 6735 | 8.567948 | CAATTGGACTGTACTAATCAGTTTGTT | 58.432 | 33.333 | 0.00 | 0.00 | 44.68 | 2.83 |
2227 | 6736 | 7.724305 | TTGGACTGTACTAATCAGTTTGTTC | 57.276 | 36.000 | 0.00 | 0.00 | 44.68 | 3.18 |
2228 | 6737 | 6.228258 | TGGACTGTACTAATCAGTTTGTTCC | 58.772 | 40.000 | 0.00 | 0.00 | 44.68 | 3.62 |
2229 | 6738 | 5.642491 | GGACTGTACTAATCAGTTTGTTCCC | 59.358 | 44.000 | 0.00 | 0.00 | 44.68 | 3.97 |
2230 | 6739 | 6.182507 | ACTGTACTAATCAGTTTGTTCCCA | 57.817 | 37.500 | 0.00 | 0.00 | 42.50 | 4.37 |
2231 | 6740 | 6.597562 | ACTGTACTAATCAGTTTGTTCCCAA | 58.402 | 36.000 | 0.00 | 0.00 | 42.50 | 4.12 |
2232 | 6741 | 6.710744 | ACTGTACTAATCAGTTTGTTCCCAAG | 59.289 | 38.462 | 0.00 | 0.00 | 42.50 | 3.61 |
2233 | 6742 | 6.001460 | TGTACTAATCAGTTTGTTCCCAAGG | 58.999 | 40.000 | 0.00 | 0.00 | 36.14 | 3.61 |
2234 | 6743 | 5.319043 | ACTAATCAGTTTGTTCCCAAGGA | 57.681 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
2235 | 6744 | 5.701224 | ACTAATCAGTTTGTTCCCAAGGAA | 58.299 | 37.500 | 0.00 | 0.00 | 39.66 | 3.36 |
2236 | 6745 | 6.133356 | ACTAATCAGTTTGTTCCCAAGGAAA | 58.867 | 36.000 | 0.00 | 0.00 | 43.86 | 3.13 |
2237 | 6746 | 5.948742 | AATCAGTTTGTTCCCAAGGAAAA | 57.051 | 34.783 | 0.00 | 0.00 | 43.86 | 2.29 |
2238 | 6747 | 5.948742 | ATCAGTTTGTTCCCAAGGAAAAA | 57.051 | 34.783 | 0.00 | 0.00 | 43.86 | 1.94 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
3 | 4 | 2.303022 | ACAAACTCAGATCGTGGTCCAT | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4 | 5 | 1.691976 | ACAAACTCAGATCGTGGTCCA | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
5 | 6 | 2.457366 | ACAAACTCAGATCGTGGTCC | 57.543 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
6 | 7 | 2.408704 | CGAACAAACTCAGATCGTGGTC | 59.591 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7 | 8 | 2.404215 | CGAACAAACTCAGATCGTGGT | 58.596 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
8 | 9 | 1.726791 | CCGAACAAACTCAGATCGTGG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
9 | 10 | 2.663602 | CTCCGAACAAACTCAGATCGTG | 59.336 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
10 | 11 | 2.927014 | GCTCCGAACAAACTCAGATCGT | 60.927 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
11 | 12 | 1.656095 | GCTCCGAACAAACTCAGATCG | 59.344 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
12 | 13 | 2.966050 | AGCTCCGAACAAACTCAGATC | 58.034 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
13 | 14 | 3.673594 | CGTAGCTCCGAACAAACTCAGAT | 60.674 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
14 | 15 | 2.351447 | CGTAGCTCCGAACAAACTCAGA | 60.351 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
15 | 16 | 1.986378 | CGTAGCTCCGAACAAACTCAG | 59.014 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
16 | 17 | 1.336517 | CCGTAGCTCCGAACAAACTCA | 60.337 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
17 | 18 | 1.336609 | ACCGTAGCTCCGAACAAACTC | 60.337 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
18 | 19 | 0.677842 | ACCGTAGCTCCGAACAAACT | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
19 | 20 | 2.352503 | TACCGTAGCTCCGAACAAAC | 57.647 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
20 | 21 | 2.231964 | ACATACCGTAGCTCCGAACAAA | 59.768 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
21 | 22 | 1.820519 | ACATACCGTAGCTCCGAACAA | 59.179 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
22 | 23 | 1.133598 | CACATACCGTAGCTCCGAACA | 59.866 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
23 | 24 | 1.836383 | CACATACCGTAGCTCCGAAC | 58.164 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
24 | 25 | 0.101759 | GCACATACCGTAGCTCCGAA | 59.898 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
25 | 26 | 1.731433 | GGCACATACCGTAGCTCCGA | 61.731 | 60.000 | 0.00 | 0.00 | 0.00 | 4.55 |
26 | 27 | 1.299926 | GGCACATACCGTAGCTCCG | 60.300 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
27 | 28 | 1.069258 | GGGCACATACCGTAGCTCC | 59.931 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
28 | 29 | 1.299926 | CGGGCACATACCGTAGCTC | 60.300 | 63.158 | 0.00 | 0.00 | 46.03 | 4.09 |
29 | 30 | 2.812499 | CGGGCACATACCGTAGCT | 59.188 | 61.111 | 0.00 | 0.00 | 46.03 | 3.32 |
35 | 36 | 0.542805 | TCTTAACCCGGGCACATACC | 59.457 | 55.000 | 24.08 | 0.00 | 0.00 | 2.73 |
36 | 37 | 2.406596 | TTCTTAACCCGGGCACATAC | 57.593 | 50.000 | 24.08 | 0.00 | 0.00 | 2.39 |
37 | 38 | 3.244981 | ACTTTTCTTAACCCGGGCACATA | 60.245 | 43.478 | 24.08 | 6.05 | 0.00 | 2.29 |
38 | 39 | 2.167662 | CTTTTCTTAACCCGGGCACAT | 58.832 | 47.619 | 24.08 | 7.22 | 0.00 | 3.21 |
39 | 40 | 1.133730 | ACTTTTCTTAACCCGGGCACA | 60.134 | 47.619 | 24.08 | 1.86 | 0.00 | 4.57 |
40 | 41 | 1.268625 | CACTTTTCTTAACCCGGGCAC | 59.731 | 52.381 | 24.08 | 0.00 | 0.00 | 5.01 |
41 | 42 | 1.143277 | TCACTTTTCTTAACCCGGGCA | 59.857 | 47.619 | 24.08 | 5.65 | 0.00 | 5.36 |
42 | 43 | 1.810755 | CTCACTTTTCTTAACCCGGGC | 59.189 | 52.381 | 24.08 | 0.00 | 0.00 | 6.13 |
43 | 44 | 2.433436 | CCTCACTTTTCTTAACCCGGG | 58.567 | 52.381 | 22.25 | 22.25 | 0.00 | 5.73 |
44 | 45 | 1.810755 | GCCTCACTTTTCTTAACCCGG | 59.189 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
45 | 46 | 1.463444 | CGCCTCACTTTTCTTAACCCG | 59.537 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
46 | 47 | 1.199327 | GCGCCTCACTTTTCTTAACCC | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
47 | 48 | 1.199327 | GGCGCCTCACTTTTCTTAACC | 59.801 | 52.381 | 22.15 | 0.00 | 0.00 | 2.85 |
48 | 49 | 1.877443 | TGGCGCCTCACTTTTCTTAAC | 59.123 | 47.619 | 29.70 | 0.00 | 0.00 | 2.01 |
49 | 50 | 2.264005 | TGGCGCCTCACTTTTCTTAA | 57.736 | 45.000 | 29.70 | 0.00 | 0.00 | 1.85 |
50 | 51 | 2.489938 | ATGGCGCCTCACTTTTCTTA | 57.510 | 45.000 | 29.70 | 1.81 | 0.00 | 2.10 |
51 | 52 | 1.541588 | GAATGGCGCCTCACTTTTCTT | 59.458 | 47.619 | 29.70 | 6.73 | 0.00 | 2.52 |
52 | 53 | 1.168714 | GAATGGCGCCTCACTTTTCT | 58.831 | 50.000 | 29.70 | 0.55 | 0.00 | 2.52 |
53 | 54 | 0.179189 | CGAATGGCGCCTCACTTTTC | 60.179 | 55.000 | 29.70 | 17.76 | 0.00 | 2.29 |
54 | 55 | 0.889186 | ACGAATGGCGCCTCACTTTT | 60.889 | 50.000 | 29.70 | 11.21 | 46.04 | 2.27 |
55 | 56 | 0.036765 | TACGAATGGCGCCTCACTTT | 60.037 | 50.000 | 29.70 | 13.06 | 46.04 | 2.66 |
56 | 57 | 0.460284 | CTACGAATGGCGCCTCACTT | 60.460 | 55.000 | 29.70 | 15.50 | 46.04 | 3.16 |
57 | 58 | 1.141881 | CTACGAATGGCGCCTCACT | 59.858 | 57.895 | 29.70 | 9.07 | 46.04 | 3.41 |
58 | 59 | 1.883084 | CCTACGAATGGCGCCTCAC | 60.883 | 63.158 | 29.70 | 16.77 | 46.04 | 3.51 |
59 | 60 | 2.499205 | CCTACGAATGGCGCCTCA | 59.501 | 61.111 | 29.70 | 8.87 | 46.04 | 3.86 |
60 | 61 | 2.967615 | GCCTACGAATGGCGCCTC | 60.968 | 66.667 | 29.70 | 17.18 | 46.04 | 4.70 |
71 | 72 | 1.805945 | GACAACTGCCTCGCCTACG | 60.806 | 63.158 | 0.00 | 0.00 | 42.01 | 3.51 |
72 | 73 | 1.805945 | CGACAACTGCCTCGCCTAC | 60.806 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
73 | 74 | 2.571757 | CGACAACTGCCTCGCCTA | 59.428 | 61.111 | 0.00 | 0.00 | 0.00 | 3.93 |
81 | 82 | 1.357334 | TTTTTCCGGCGACAACTGC | 59.643 | 52.632 | 9.30 | 0.00 | 0.00 | 4.40 |
96 | 97 | 4.478686 | AGGAGAGGTGGGCACTATATTTTT | 59.521 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
97 | 98 | 4.047883 | AGGAGAGGTGGGCACTATATTTT | 58.952 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
98 | 99 | 3.669949 | AGGAGAGGTGGGCACTATATTT | 58.330 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
99 | 100 | 3.352611 | AGGAGAGGTGGGCACTATATT | 57.647 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
100 | 101 | 3.243724 | GAAGGAGAGGTGGGCACTATAT | 58.756 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
101 | 102 | 2.679082 | GAAGGAGAGGTGGGCACTATA | 58.321 | 52.381 | 0.00 | 0.00 | 0.00 | 1.31 |
102 | 103 | 1.501582 | GAAGGAGAGGTGGGCACTAT | 58.498 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
103 | 104 | 0.617820 | GGAAGGAGAGGTGGGCACTA | 60.618 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
104 | 105 | 1.920835 | GGAAGGAGAGGTGGGCACT | 60.921 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
105 | 106 | 2.224159 | TGGAAGGAGAGGTGGGCAC | 61.224 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
106 | 107 | 2.206900 | TGGAAGGAGAGGTGGGCA | 59.793 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
107 | 108 | 2.671682 | GTGGAAGGAGAGGTGGGC | 59.328 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
108 | 109 | 1.229658 | AGGTGGAAGGAGAGGTGGG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
109 | 110 | 1.268283 | GGAGGTGGAAGGAGAGGTGG | 61.268 | 65.000 | 0.00 | 0.00 | 0.00 | 4.61 |
110 | 111 | 1.608717 | CGGAGGTGGAAGGAGAGGTG | 61.609 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
111 | 112 | 1.305381 | CGGAGGTGGAAGGAGAGGT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
112 | 113 | 1.305381 | ACGGAGGTGGAAGGAGAGG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
113 | 114 | 1.324005 | GGACGGAGGTGGAAGGAGAG | 61.324 | 65.000 | 0.00 | 0.00 | 0.00 | 3.20 |
114 | 115 | 1.305046 | GGACGGAGGTGGAAGGAGA | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
115 | 116 | 2.711922 | CGGACGGAGGTGGAAGGAG | 61.712 | 68.421 | 0.00 | 0.00 | 0.00 | 3.69 |
116 | 117 | 2.678934 | CGGACGGAGGTGGAAGGA | 60.679 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
117 | 118 | 2.678934 | TCGGACGGAGGTGGAAGG | 60.679 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
118 | 119 | 2.885861 | CTCGGACGGAGGTGGAAG | 59.114 | 66.667 | 2.13 | 0.00 | 39.22 | 3.46 |
119 | 120 | 3.379445 | GCTCGGACGGAGGTGGAA | 61.379 | 66.667 | 11.57 | 0.00 | 43.36 | 3.53 |
124 | 125 | 3.111939 | CACTAGCTCGGACGGAGG | 58.888 | 66.667 | 11.57 | 0.00 | 43.36 | 4.30 |
125 | 126 | 2.409651 | GCACTAGCTCGGACGGAG | 59.590 | 66.667 | 5.68 | 5.68 | 46.06 | 4.63 |
126 | 127 | 3.506096 | CGCACTAGCTCGGACGGA | 61.506 | 66.667 | 0.00 | 0.00 | 39.10 | 4.69 |
127 | 128 | 3.456431 | CTCGCACTAGCTCGGACGG | 62.456 | 68.421 | 0.00 | 0.00 | 39.10 | 4.79 |
128 | 129 | 2.023461 | CTCGCACTAGCTCGGACG | 59.977 | 66.667 | 0.00 | 0.00 | 39.10 | 4.79 |
129 | 130 | 1.090625 | TCTCTCGCACTAGCTCGGAC | 61.091 | 60.000 | 0.00 | 0.00 | 39.10 | 4.79 |
130 | 131 | 0.179043 | ATCTCTCGCACTAGCTCGGA | 60.179 | 55.000 | 0.00 | 1.48 | 39.10 | 4.55 |
131 | 132 | 1.514003 | TATCTCTCGCACTAGCTCGG | 58.486 | 55.000 | 0.00 | 0.00 | 39.10 | 4.63 |
132 | 133 | 2.159585 | CCATATCTCTCGCACTAGCTCG | 60.160 | 54.545 | 0.00 | 0.00 | 39.10 | 5.03 |
133 | 134 | 2.817258 | ACCATATCTCTCGCACTAGCTC | 59.183 | 50.000 | 0.00 | 0.00 | 39.10 | 4.09 |
134 | 135 | 2.870175 | ACCATATCTCTCGCACTAGCT | 58.130 | 47.619 | 0.00 | 0.00 | 39.10 | 3.32 |
135 | 136 | 3.004839 | TGAACCATATCTCTCGCACTAGC | 59.995 | 47.826 | 0.00 | 0.00 | 37.42 | 3.42 |
136 | 137 | 4.837896 | TGAACCATATCTCTCGCACTAG | 57.162 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
137 | 138 | 4.827284 | TGATGAACCATATCTCTCGCACTA | 59.173 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
138 | 139 | 3.638627 | TGATGAACCATATCTCTCGCACT | 59.361 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
139 | 140 | 3.982475 | TGATGAACCATATCTCTCGCAC | 58.018 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
140 | 141 | 3.006217 | CCTGATGAACCATATCTCTCGCA | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 5.10 |
141 | 142 | 3.583806 | CCTGATGAACCATATCTCTCGC | 58.416 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
142 | 143 | 3.576118 | ACCCTGATGAACCATATCTCTCG | 59.424 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
143 | 144 | 5.559148 | AACCCTGATGAACCATATCTCTC | 57.441 | 43.478 | 0.00 | 0.00 | 0.00 | 3.20 |
144 | 145 | 5.192522 | ACAAACCCTGATGAACCATATCTCT | 59.807 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
145 | 146 | 5.440610 | ACAAACCCTGATGAACCATATCTC | 58.559 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
146 | 147 | 5.440610 | GACAAACCCTGATGAACCATATCT | 58.559 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
147 | 148 | 4.580580 | GGACAAACCCTGATGAACCATATC | 59.419 | 45.833 | 0.00 | 0.00 | 0.00 | 1.63 |
148 | 149 | 4.230502 | AGGACAAACCCTGATGAACCATAT | 59.769 | 41.667 | 0.00 | 0.00 | 40.05 | 1.78 |
149 | 150 | 3.591527 | AGGACAAACCCTGATGAACCATA | 59.408 | 43.478 | 0.00 | 0.00 | 40.05 | 2.74 |
150 | 151 | 2.379907 | AGGACAAACCCTGATGAACCAT | 59.620 | 45.455 | 0.00 | 0.00 | 40.05 | 3.55 |
151 | 152 | 1.780309 | AGGACAAACCCTGATGAACCA | 59.220 | 47.619 | 0.00 | 0.00 | 40.05 | 3.67 |
152 | 153 | 2.586648 | AGGACAAACCCTGATGAACC | 57.413 | 50.000 | 0.00 | 0.00 | 40.05 | 3.62 |
153 | 154 | 4.394729 | TGTTAGGACAAACCCTGATGAAC | 58.605 | 43.478 | 0.00 | 0.00 | 40.05 | 3.18 |
154 | 155 | 4.715534 | TGTTAGGACAAACCCTGATGAA | 57.284 | 40.909 | 0.00 | 0.00 | 40.05 | 2.57 |
155 | 156 | 4.104102 | AGTTGTTAGGACAAACCCTGATGA | 59.896 | 41.667 | 0.00 | 0.00 | 46.62 | 2.92 |
156 | 157 | 4.398319 | AGTTGTTAGGACAAACCCTGATG | 58.602 | 43.478 | 0.00 | 0.00 | 46.62 | 3.07 |
157 | 158 | 4.724279 | AGTTGTTAGGACAAACCCTGAT | 57.276 | 40.909 | 0.00 | 0.00 | 46.62 | 2.90 |
158 | 159 | 4.513406 | AAGTTGTTAGGACAAACCCTGA | 57.487 | 40.909 | 0.00 | 0.00 | 46.62 | 3.86 |
159 | 160 | 4.642885 | TGAAAGTTGTTAGGACAAACCCTG | 59.357 | 41.667 | 0.00 | 0.00 | 46.62 | 4.45 |
160 | 161 | 4.643334 | GTGAAAGTTGTTAGGACAAACCCT | 59.357 | 41.667 | 0.00 | 0.00 | 46.62 | 4.34 |
161 | 162 | 4.399934 | TGTGAAAGTTGTTAGGACAAACCC | 59.600 | 41.667 | 0.00 | 0.00 | 46.62 | 4.11 |
162 | 163 | 5.570234 | TGTGAAAGTTGTTAGGACAAACC | 57.430 | 39.130 | 0.00 | 0.00 | 46.62 | 3.27 |
163 | 164 | 5.977129 | CCATGTGAAAGTTGTTAGGACAAAC | 59.023 | 40.000 | 0.00 | 0.00 | 46.62 | 2.93 |
164 | 165 | 5.888724 | TCCATGTGAAAGTTGTTAGGACAAA | 59.111 | 36.000 | 0.00 | 0.00 | 46.62 | 2.83 |
165 | 166 | 5.441500 | TCCATGTGAAAGTTGTTAGGACAA | 58.558 | 37.500 | 0.00 | 0.00 | 43.23 | 3.18 |
166 | 167 | 5.042463 | TCCATGTGAAAGTTGTTAGGACA | 57.958 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
167 | 168 | 6.653320 | TGTATCCATGTGAAAGTTGTTAGGAC | 59.347 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
168 | 169 | 6.774673 | TGTATCCATGTGAAAGTTGTTAGGA | 58.225 | 36.000 | 0.00 | 0.00 | 0.00 | 2.94 |
169 | 170 | 7.447374 | TTGTATCCATGTGAAAGTTGTTAGG | 57.553 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
170 | 171 | 7.807907 | GGTTTGTATCCATGTGAAAGTTGTTAG | 59.192 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
171 | 172 | 7.285629 | TGGTTTGTATCCATGTGAAAGTTGTTA | 59.714 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
172 | 173 | 6.097554 | TGGTTTGTATCCATGTGAAAGTTGTT | 59.902 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
173 | 174 | 5.596361 | TGGTTTGTATCCATGTGAAAGTTGT | 59.404 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
174 | 175 | 6.083098 | TGGTTTGTATCCATGTGAAAGTTG | 57.917 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
175 | 176 | 6.493115 | TGATGGTTTGTATCCATGTGAAAGTT | 59.507 | 34.615 | 2.04 | 0.00 | 44.52 | 2.66 |
193 | 194 | 1.465188 | TGGTGGACCCCTGATGGTT | 60.465 | 57.895 | 0.00 | 0.00 | 39.24 | 3.67 |
198 | 199 | 0.490017 | TAAGACTGGTGGACCCCTGA | 59.510 | 55.000 | 11.28 | 0.00 | 34.29 | 3.86 |
213 | 214 | 3.133362 | GTGGACCGTCCCATATGTTAAGA | 59.867 | 47.826 | 15.24 | 0.00 | 38.66 | 2.10 |
214 | 215 | 3.463944 | GTGGACCGTCCCATATGTTAAG | 58.536 | 50.000 | 15.24 | 0.00 | 38.66 | 1.85 |
250 | 251 | 6.157645 | AGGAATTGTCATGATACTCTGGTCTT | 59.842 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
272 | 273 | 0.322456 | GCATTGGTGGTGCAGTAGGA | 60.322 | 55.000 | 0.00 | 0.00 | 42.08 | 2.94 |
285 | 286 | 0.462047 | GTAGTCGTGGGAGGCATTGG | 60.462 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
286 | 287 | 0.249120 | TGTAGTCGTGGGAGGCATTG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
305 | 306 | 2.579201 | CGTGAGGGCGATGAGGTT | 59.421 | 61.111 | 0.00 | 0.00 | 0.00 | 3.50 |
326 | 327 | 1.512926 | CGGTGCTAGTCTGCAGTTTT | 58.487 | 50.000 | 14.67 | 3.14 | 44.20 | 2.43 |
338 | 339 | 2.443390 | GGCCTAGACCCGGTGCTA | 60.443 | 66.667 | 0.00 | 0.01 | 0.00 | 3.49 |
356 | 357 | 0.983378 | GGATGGTGGACAGGGCTACT | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
357 | 358 | 1.527370 | GGATGGTGGACAGGGCTAC | 59.473 | 63.158 | 0.00 | 0.00 | 0.00 | 3.58 |
360 | 361 | 4.489771 | CCGGATGGTGGACAGGGC | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
361 | 362 | 2.687200 | TCCGGATGGTGGACAGGG | 60.687 | 66.667 | 0.00 | 0.00 | 36.30 | 4.45 |
364 | 365 | 2.211375 | CATCTCCGGATGGTGGACA | 58.789 | 57.895 | 3.57 | 0.00 | 43.97 | 4.02 |
375 | 376 | 0.179134 | GGTCCAGAACGACATCTCCG | 60.179 | 60.000 | 0.00 | 0.00 | 34.24 | 4.63 |
389 | 390 | 1.455822 | AGGTTGATTCCTTGGGTCCA | 58.544 | 50.000 | 0.00 | 0.00 | 33.52 | 4.02 |
398 | 399 | 1.407851 | GGGACGGGTAAGGTTGATTCC | 60.408 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
415 | 416 | 0.999712 | GAGAAAATCCTGGTGGGGGA | 59.000 | 55.000 | 0.00 | 0.00 | 37.26 | 4.81 |
456 | 457 | 7.155328 | CACGTGAGCTATTTAGGGAAGATTAT | 58.845 | 38.462 | 10.90 | 0.00 | 0.00 | 1.28 |
475 | 476 | 5.353123 | GGCTTATTTCAGGATTTACACGTGA | 59.647 | 40.000 | 25.01 | 0.00 | 0.00 | 4.35 |
480 | 481 | 6.882140 | TCTTTCGGCTTATTTCAGGATTTACA | 59.118 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
499 | 500 | 9.907576 | GATAGATCAACATTTGTACTTCTTTCG | 57.092 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
553 | 554 | 8.928733 | CACATACGTACACACCTAAGTTTAATT | 58.071 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
554 | 555 | 7.063780 | GCACATACGTACACACCTAAGTTTAAT | 59.936 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
555 | 556 | 6.365789 | GCACATACGTACACACCTAAGTTTAA | 59.634 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
607 | 612 | 5.220951 | CGCTATATCATGTCTTATCTCGGCT | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 5.52 |
611 | 616 | 5.746245 | GCACCGCTATATCATGTCTTATCTC | 59.254 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
626 | 636 | 3.772932 | CAAAACATTCATGCACCGCTAT | 58.227 | 40.909 | 0.00 | 0.00 | 0.00 | 2.97 |
633 | 643 | 2.144730 | GCCAAGCAAAACATTCATGCA | 58.855 | 42.857 | 0.00 | 0.00 | 42.45 | 3.96 |
706 | 2695 | 4.612939 | GCGCCGTCCTCCAAAAATATTATC | 60.613 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
711 | 2700 | 0.321741 | TGCGCCGTCCTCCAAAAATA | 60.322 | 50.000 | 4.18 | 0.00 | 0.00 | 1.40 |
715 | 2704 | 4.243008 | TGTGCGCCGTCCTCCAAA | 62.243 | 61.111 | 4.18 | 0.00 | 0.00 | 3.28 |
734 | 3835 | 5.012239 | CCTACCATACAATAGGCATGCATT | 58.988 | 41.667 | 21.36 | 8.81 | 31.89 | 3.56 |
752 | 3853 | 0.535553 | TTGTTTGCCGGTGTCCTACC | 60.536 | 55.000 | 1.90 | 0.00 | 46.56 | 3.18 |
800 | 3901 | 6.071784 | ACAAGCATGACACATATTGACAACAT | 60.072 | 34.615 | 0.00 | 0.00 | 33.44 | 2.71 |
839 | 3944 | 1.447838 | ATCGCGCATGTCGTCCTTT | 60.448 | 52.632 | 8.75 | 0.00 | 41.07 | 3.11 |
1188 | 4298 | 1.402984 | GCTTCGTTGGAGATGACGACT | 60.403 | 52.381 | 0.00 | 0.00 | 46.61 | 4.18 |
1271 | 4381 | 3.447586 | AGCTCTGCGTGGAACTAATAAGA | 59.552 | 43.478 | 0.00 | 0.00 | 31.75 | 2.10 |
1280 | 4390 | 1.067565 | CAGAACTAGCTCTGCGTGGAA | 60.068 | 52.381 | 10.11 | 0.00 | 36.67 | 3.53 |
1298 | 5766 | 2.050144 | AGTATGATACCAGGTGGGCAG | 58.950 | 52.381 | 0.76 | 0.00 | 42.05 | 4.85 |
1354 | 5822 | 6.037391 | GGGTTACACTTATTTATAGCGTTGCA | 59.963 | 38.462 | 0.00 | 0.00 | 0.00 | 4.08 |
1358 | 5826 | 6.764560 | CCAAGGGTTACACTTATTTATAGCGT | 59.235 | 38.462 | 0.00 | 0.00 | 0.00 | 5.07 |
1425 | 5927 | 3.564225 | GGGTCTAATAAATGTGGAAGCCG | 59.436 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
1429 | 5931 | 6.795590 | TCTTTGGGGTCTAATAAATGTGGAA | 58.204 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1441 | 5944 | 5.718130 | TCGATAGTTTTCTCTTTGGGGTCTA | 59.282 | 40.000 | 0.00 | 0.00 | 37.40 | 2.59 |
1559 | 6062 | 7.327975 | TCCCAGTAGTGTTATACTTGTTGATG | 58.672 | 38.462 | 0.00 | 0.00 | 40.89 | 3.07 |
1562 | 6065 | 7.972832 | TTTCCCAGTAGTGTTATACTTGTTG | 57.027 | 36.000 | 0.00 | 0.00 | 40.89 | 3.33 |
1572 | 6075 | 7.182206 | ACCTATATGTCTTTTCCCAGTAGTGTT | 59.818 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
1588 | 6092 | 6.428159 | CACTAATTTGAGCCCACCTATATGTC | 59.572 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
1628 | 6132 | 2.355310 | CCAAAATAGTAGTGGCGGGTGA | 60.355 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1640 | 6144 | 5.048013 | GCCACAGCTACTTTTCCAAAATAGT | 60.048 | 40.000 | 0.00 | 0.00 | 35.50 | 2.12 |
1707 | 6212 | 3.146066 | GCAGGTCATATATTTTGCCCGA | 58.854 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
1731 | 6236 | 9.083080 | GTGGGCAAATTTGTAATAGTTTATGAC | 57.917 | 33.333 | 19.03 | 0.00 | 0.00 | 3.06 |
1811 | 6319 | 0.677288 | TTTTCTCCCGCGACTCTTGA | 59.323 | 50.000 | 8.23 | 0.00 | 0.00 | 3.02 |
1819 | 6327 | 0.041312 | CGGCATATTTTTCTCCCGCG | 60.041 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
1825 | 6333 | 3.466836 | TGATCTCGCGGCATATTTTTCT | 58.533 | 40.909 | 6.13 | 0.00 | 0.00 | 2.52 |
1838 | 6346 | 3.433615 | GGTTGCCATAGTATTGATCTCGC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 5.03 |
1839 | 6347 | 3.997021 | GGGTTGCCATAGTATTGATCTCG | 59.003 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
1840 | 6348 | 4.973168 | TGGGTTGCCATAGTATTGATCTC | 58.027 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
1841 | 6349 | 5.589367 | ATGGGTTGCCATAGTATTGATCT | 57.411 | 39.130 | 0.00 | 0.00 | 0.00 | 2.75 |
1842 | 6350 | 5.648092 | GGTATGGGTTGCCATAGTATTGATC | 59.352 | 44.000 | 0.00 | 0.00 | 33.93 | 2.92 |
1853 | 6362 | 4.505742 | GGAAATTTTTGGTATGGGTTGCCA | 60.506 | 41.667 | 0.00 | 0.00 | 38.48 | 4.92 |
1883 | 6392 | 0.102120 | CGCCACTGCAAACTTTTGGA | 59.898 | 50.000 | 3.95 | 0.00 | 38.57 | 3.53 |
1926 | 6435 | 5.417580 | CCATAAATCTCCGAACCCAGAAAAA | 59.582 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
1930 | 6439 | 2.158813 | GCCATAAATCTCCGAACCCAGA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1934 | 6443 | 0.586802 | GCGCCATAAATCTCCGAACC | 59.413 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
1936 | 6445 | 1.295792 | GTGCGCCATAAATCTCCGAA | 58.704 | 50.000 | 4.18 | 0.00 | 0.00 | 4.30 |
1938 | 6447 | 1.229428 | ATGTGCGCCATAAATCTCCG | 58.771 | 50.000 | 4.18 | 0.00 | 29.82 | 4.63 |
1943 | 6452 | 2.032799 | CGTGGTAATGTGCGCCATAAAT | 59.967 | 45.455 | 4.18 | 0.00 | 34.52 | 1.40 |
1954 | 6463 | 1.376295 | GGGGCGTTCGTGGTAATGT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 2.71 |
1958 | 6467 | 4.054825 | GTCGGGGCGTTCGTGGTA | 62.055 | 66.667 | 0.00 | 0.00 | 0.00 | 3.25 |
1965 | 6474 | 1.174078 | AATTTTTCCGTCGGGGCGTT | 61.174 | 50.000 | 12.29 | 0.00 | 34.94 | 4.84 |
1972 | 6481 | 5.849604 | GGAAAACTACTCAATTTTTCCGTCG | 59.150 | 40.000 | 8.82 | 0.00 | 45.03 | 5.12 |
1979 | 6488 | 4.339814 | TGCGGTGGAAAACTACTCAATTTT | 59.660 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
1997 | 6506 | 1.722011 | CCGATTTGAGTAAGTGCGGT | 58.278 | 50.000 | 0.00 | 0.00 | 33.14 | 5.68 |
2038 | 6547 | 2.359570 | AATATCGGTGCGGACGGGTC | 62.360 | 60.000 | 14.38 | 0.00 | 0.00 | 4.46 |
2039 | 6548 | 2.428925 | AATATCGGTGCGGACGGGT | 61.429 | 57.895 | 14.38 | 10.18 | 0.00 | 5.28 |
2041 | 6550 | 1.954146 | CCAATATCGGTGCGGACGG | 60.954 | 63.158 | 8.36 | 8.36 | 0.00 | 4.79 |
2042 | 6551 | 0.031043 | TACCAATATCGGTGCGGACG | 59.969 | 55.000 | 0.00 | 0.00 | 40.39 | 4.79 |
2043 | 6552 | 1.494824 | GTACCAATATCGGTGCGGAC | 58.505 | 55.000 | 0.00 | 0.00 | 40.39 | 4.79 |
2044 | 6553 | 3.972107 | GTACCAATATCGGTGCGGA | 57.028 | 52.632 | 0.00 | 0.00 | 40.39 | 5.54 |
2047 | 6556 | 2.034305 | AGAGACGTACCAATATCGGTGC | 59.966 | 50.000 | 0.00 | 0.00 | 40.39 | 5.01 |
2048 | 6557 | 3.304525 | GGAGAGACGTACCAATATCGGTG | 60.305 | 52.174 | 0.00 | 0.00 | 40.39 | 4.94 |
2049 | 6558 | 2.883386 | GGAGAGACGTACCAATATCGGT | 59.117 | 50.000 | 0.00 | 0.00 | 43.46 | 4.69 |
2050 | 6559 | 2.228343 | GGGAGAGACGTACCAATATCGG | 59.772 | 54.545 | 0.00 | 0.00 | 0.00 | 4.18 |
2051 | 6560 | 3.147629 | AGGGAGAGACGTACCAATATCG | 58.852 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2052 | 6561 | 4.023021 | GTGAGGGAGAGACGTACCAATATC | 60.023 | 50.000 | 0.00 | 0.00 | 0.00 | 1.63 |
2053 | 6562 | 3.890147 | GTGAGGGAGAGACGTACCAATAT | 59.110 | 47.826 | 0.00 | 0.00 | 0.00 | 1.28 |
2054 | 6563 | 3.285484 | GTGAGGGAGAGACGTACCAATA | 58.715 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2055 | 6564 | 2.100989 | GTGAGGGAGAGACGTACCAAT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
2056 | 6565 | 1.542492 | GTGAGGGAGAGACGTACCAA | 58.458 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2057 | 6566 | 0.323178 | GGTGAGGGAGAGACGTACCA | 60.323 | 60.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2058 | 6567 | 0.034283 | AGGTGAGGGAGAGACGTACC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2059 | 6568 | 1.381522 | GAGGTGAGGGAGAGACGTAC | 58.618 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2060 | 6569 | 0.107800 | CGAGGTGAGGGAGAGACGTA | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2061 | 6570 | 1.377463 | CGAGGTGAGGGAGAGACGT | 60.377 | 63.158 | 0.00 | 0.00 | 0.00 | 4.34 |
2062 | 6571 | 1.370587 | GACGAGGTGAGGGAGAGACG | 61.371 | 65.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2063 | 6572 | 1.033202 | GGACGAGGTGAGGGAGAGAC | 61.033 | 65.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2064 | 6573 | 1.303615 | GGACGAGGTGAGGGAGAGA | 59.696 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
2065 | 6574 | 1.755008 | GGGACGAGGTGAGGGAGAG | 60.755 | 68.421 | 0.00 | 0.00 | 0.00 | 3.20 |
2066 | 6575 | 2.359404 | GGGACGAGGTGAGGGAGA | 59.641 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2067 | 6576 | 2.760385 | GGGGACGAGGTGAGGGAG | 60.760 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
2068 | 6577 | 4.393778 | GGGGGACGAGGTGAGGGA | 62.394 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
2069 | 6578 | 4.715130 | TGGGGGACGAGGTGAGGG | 62.715 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
2070 | 6579 | 1.995626 | AATGGGGGACGAGGTGAGG | 60.996 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
2071 | 6580 | 1.221840 | CAATGGGGGACGAGGTGAG | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2072 | 6581 | 1.229368 | TCAATGGGGGACGAGGTGA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
2073 | 6582 | 1.221840 | CTCAATGGGGGACGAGGTG | 59.778 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
2074 | 6583 | 2.670148 | GCTCAATGGGGGACGAGGT | 61.670 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
2075 | 6584 | 2.190578 | GCTCAATGGGGGACGAGG | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
2076 | 6585 | 1.153289 | CAGCTCAATGGGGGACGAG | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
2077 | 6586 | 1.488705 | AACAGCTCAATGGGGGACGA | 61.489 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2078 | 6587 | 0.609131 | AAACAGCTCAATGGGGGACG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2079 | 6588 | 0.890683 | CAAACAGCTCAATGGGGGAC | 59.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2080 | 6589 | 0.899717 | GCAAACAGCTCAATGGGGGA | 60.900 | 55.000 | 0.00 | 0.00 | 41.15 | 4.81 |
2081 | 6590 | 1.593265 | GCAAACAGCTCAATGGGGG | 59.407 | 57.895 | 0.00 | 0.00 | 41.15 | 5.40 |
2082 | 6591 | 1.593265 | GGCAAACAGCTCAATGGGG | 59.407 | 57.895 | 0.00 | 0.00 | 44.79 | 4.96 |
2083 | 6592 | 1.213537 | CGGCAAACAGCTCAATGGG | 59.786 | 57.895 | 0.00 | 0.00 | 44.79 | 4.00 |
2084 | 6593 | 1.444895 | GCGGCAAACAGCTCAATGG | 60.445 | 57.895 | 0.00 | 0.00 | 44.79 | 3.16 |
2085 | 6594 | 0.318869 | TTGCGGCAAACAGCTCAATG | 60.319 | 50.000 | 13.93 | 0.00 | 44.79 | 2.82 |
2086 | 6595 | 0.318955 | GTTGCGGCAAACAGCTCAAT | 60.319 | 50.000 | 18.23 | 0.00 | 44.79 | 2.57 |
2087 | 6596 | 1.065600 | GTTGCGGCAAACAGCTCAA | 59.934 | 52.632 | 18.23 | 0.00 | 44.79 | 3.02 |
2088 | 6597 | 2.721231 | GTTGCGGCAAACAGCTCA | 59.279 | 55.556 | 18.23 | 0.00 | 44.79 | 4.26 |
2089 | 6598 | 2.050077 | GGTTGCGGCAAACAGCTC | 60.050 | 61.111 | 24.93 | 7.97 | 44.79 | 4.09 |
2090 | 6599 | 3.964875 | CGGTTGCGGCAAACAGCT | 61.965 | 61.111 | 28.26 | 0.00 | 44.79 | 4.24 |
2092 | 6601 | 4.999939 | GGCGGTTGCGGCAAACAG | 63.000 | 66.667 | 28.26 | 21.08 | 44.10 | 3.16 |
2094 | 6603 | 4.999939 | CTGGCGGTTGCGGCAAAC | 63.000 | 66.667 | 20.51 | 20.51 | 43.61 | 2.93 |
2111 | 6620 | 4.825252 | ATGGCGGCGTCGTAACCC | 62.825 | 66.667 | 12.58 | 3.65 | 38.89 | 4.11 |
2112 | 6621 | 2.816520 | AATGGCGGCGTCGTAACC | 60.817 | 61.111 | 12.58 | 4.09 | 38.89 | 2.85 |
2113 | 6622 | 2.398036 | CAATGGCGGCGTCGTAAC | 59.602 | 61.111 | 12.58 | 2.19 | 38.89 | 2.50 |
2114 | 6623 | 3.492545 | GCAATGGCGGCGTCGTAA | 61.493 | 61.111 | 12.58 | 0.00 | 38.89 | 3.18 |
2124 | 6633 | 0.823769 | GCCCTAACCCTAGCAATGGC | 60.824 | 60.000 | 0.00 | 0.00 | 41.61 | 4.40 |
2125 | 6634 | 0.535102 | CGCCCTAACCCTAGCAATGG | 60.535 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2126 | 6635 | 1.166531 | GCGCCCTAACCCTAGCAATG | 61.167 | 60.000 | 0.00 | 0.00 | 0.00 | 2.82 |
2127 | 6636 | 1.148498 | GCGCCCTAACCCTAGCAAT | 59.852 | 57.895 | 0.00 | 0.00 | 0.00 | 3.56 |
2128 | 6637 | 2.587889 | GCGCCCTAACCCTAGCAA | 59.412 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
2129 | 6638 | 3.476419 | GGCGCCCTAACCCTAGCA | 61.476 | 66.667 | 18.11 | 0.00 | 0.00 | 3.49 |
2130 | 6639 | 4.603946 | CGGCGCCCTAACCCTAGC | 62.604 | 72.222 | 23.46 | 0.00 | 0.00 | 3.42 |
2131 | 6640 | 2.207924 | ATCGGCGCCCTAACCCTAG | 61.208 | 63.158 | 23.46 | 2.86 | 0.00 | 3.02 |
2132 | 6641 | 2.123164 | ATCGGCGCCCTAACCCTA | 60.123 | 61.111 | 23.46 | 0.00 | 0.00 | 3.53 |
2133 | 6642 | 3.861797 | CATCGGCGCCCTAACCCT | 61.862 | 66.667 | 23.46 | 0.00 | 0.00 | 4.34 |
2134 | 6643 | 4.171103 | ACATCGGCGCCCTAACCC | 62.171 | 66.667 | 23.46 | 0.00 | 0.00 | 4.11 |
2135 | 6644 | 2.588034 | GACATCGGCGCCCTAACC | 60.588 | 66.667 | 23.46 | 3.69 | 0.00 | 2.85 |
2136 | 6645 | 1.591863 | GAGACATCGGCGCCCTAAC | 60.592 | 63.158 | 23.46 | 9.03 | 0.00 | 2.34 |
2137 | 6646 | 2.792947 | GGAGACATCGGCGCCCTAA | 61.793 | 63.158 | 23.46 | 7.13 | 0.00 | 2.69 |
2138 | 6647 | 3.224324 | GGAGACATCGGCGCCCTA | 61.224 | 66.667 | 23.46 | 10.21 | 0.00 | 3.53 |
2144 | 6653 | 3.825833 | CTACCGCGGAGACATCGGC | 62.826 | 68.421 | 35.90 | 0.00 | 46.33 | 5.54 |
2146 | 6655 | 0.873054 | ATACTACCGCGGAGACATCG | 59.127 | 55.000 | 35.90 | 7.50 | 0.00 | 3.84 |
2147 | 6656 | 1.878088 | TCATACTACCGCGGAGACATC | 59.122 | 52.381 | 35.90 | 0.00 | 0.00 | 3.06 |
2148 | 6657 | 1.880675 | CTCATACTACCGCGGAGACAT | 59.119 | 52.381 | 35.90 | 16.39 | 0.00 | 3.06 |
2149 | 6658 | 1.306148 | CTCATACTACCGCGGAGACA | 58.694 | 55.000 | 35.90 | 14.64 | 0.00 | 3.41 |
2150 | 6659 | 0.040246 | GCTCATACTACCGCGGAGAC | 60.040 | 60.000 | 35.90 | 9.14 | 0.00 | 3.36 |
2151 | 6660 | 0.179026 | AGCTCATACTACCGCGGAGA | 60.179 | 55.000 | 35.90 | 18.55 | 0.00 | 3.71 |
2152 | 6661 | 1.465387 | CTAGCTCATACTACCGCGGAG | 59.535 | 57.143 | 35.90 | 25.72 | 0.00 | 4.63 |
2153 | 6662 | 1.202734 | ACTAGCTCATACTACCGCGGA | 60.203 | 52.381 | 35.90 | 14.96 | 0.00 | 5.54 |
2154 | 6663 | 1.236628 | ACTAGCTCATACTACCGCGG | 58.763 | 55.000 | 26.86 | 26.86 | 0.00 | 6.46 |
2155 | 6664 | 4.478843 | TTAACTAGCTCATACTACCGCG | 57.521 | 45.455 | 0.00 | 0.00 | 0.00 | 6.46 |
2156 | 6665 | 6.019237 | GGTTTTTAACTAGCTCATACTACCGC | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 5.68 |
2157 | 6666 | 7.037438 | TGGTTTTTAACTAGCTCATACTACCG | 58.963 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
2158 | 6667 | 8.782339 | TTGGTTTTTAACTAGCTCATACTACC | 57.218 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2180 | 6689 | 9.991388 | CCAATTGCAACTCAATAATTAATTTGG | 57.009 | 29.630 | 5.91 | 2.60 | 44.23 | 3.28 |
2184 | 6693 | 9.590451 | CAGTCCAATTGCAACTCAATAATTAAT | 57.410 | 29.630 | 0.00 | 0.00 | 44.23 | 1.40 |
2185 | 6694 | 8.584157 | ACAGTCCAATTGCAACTCAATAATTAA | 58.416 | 29.630 | 0.00 | 0.00 | 44.23 | 1.40 |
2186 | 6695 | 8.121305 | ACAGTCCAATTGCAACTCAATAATTA | 57.879 | 30.769 | 0.00 | 0.00 | 44.23 | 1.40 |
2187 | 6696 | 6.996509 | ACAGTCCAATTGCAACTCAATAATT | 58.003 | 32.000 | 0.00 | 0.00 | 44.23 | 1.40 |
2188 | 6697 | 6.594788 | ACAGTCCAATTGCAACTCAATAAT | 57.405 | 33.333 | 0.00 | 0.00 | 44.23 | 1.28 |
2189 | 6698 | 6.714810 | AGTACAGTCCAATTGCAACTCAATAA | 59.285 | 34.615 | 0.00 | 0.00 | 44.23 | 1.40 |
2190 | 6699 | 6.237901 | AGTACAGTCCAATTGCAACTCAATA | 58.762 | 36.000 | 0.00 | 0.00 | 44.23 | 1.90 |
2191 | 6700 | 5.072741 | AGTACAGTCCAATTGCAACTCAAT | 58.927 | 37.500 | 0.00 | 0.00 | 46.82 | 2.57 |
2192 | 6701 | 4.460263 | AGTACAGTCCAATTGCAACTCAA | 58.540 | 39.130 | 0.00 | 0.00 | 39.32 | 3.02 |
2193 | 6702 | 4.085357 | AGTACAGTCCAATTGCAACTCA | 57.915 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
2194 | 6703 | 6.371548 | TGATTAGTACAGTCCAATTGCAACTC | 59.628 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
2195 | 6704 | 6.237901 | TGATTAGTACAGTCCAATTGCAACT | 58.762 | 36.000 | 0.00 | 2.90 | 0.00 | 3.16 |
2196 | 6705 | 6.149474 | ACTGATTAGTACAGTCCAATTGCAAC | 59.851 | 38.462 | 0.00 | 0.37 | 43.84 | 4.17 |
2197 | 6706 | 6.237901 | ACTGATTAGTACAGTCCAATTGCAA | 58.762 | 36.000 | 0.00 | 0.00 | 43.84 | 4.08 |
2198 | 6707 | 5.804639 | ACTGATTAGTACAGTCCAATTGCA | 58.195 | 37.500 | 0.00 | 0.00 | 43.84 | 4.08 |
2199 | 6708 | 6.743575 | AACTGATTAGTACAGTCCAATTGC | 57.256 | 37.500 | 0.00 | 0.00 | 46.01 | 3.56 |
2200 | 6709 | 8.099364 | ACAAACTGATTAGTACAGTCCAATTG | 57.901 | 34.615 | 0.00 | 0.00 | 46.01 | 2.32 |
2201 | 6710 | 8.691661 | AACAAACTGATTAGTACAGTCCAATT | 57.308 | 30.769 | 0.00 | 0.00 | 46.01 | 2.32 |
2202 | 6711 | 7.390718 | GGAACAAACTGATTAGTACAGTCCAAT | 59.609 | 37.037 | 0.00 | 0.00 | 46.01 | 3.16 |
2203 | 6712 | 6.708949 | GGAACAAACTGATTAGTACAGTCCAA | 59.291 | 38.462 | 0.00 | 0.00 | 46.01 | 3.53 |
2204 | 6713 | 6.228258 | GGAACAAACTGATTAGTACAGTCCA | 58.772 | 40.000 | 0.00 | 0.00 | 46.01 | 4.02 |
2205 | 6714 | 5.642491 | GGGAACAAACTGATTAGTACAGTCC | 59.358 | 44.000 | 0.00 | 0.00 | 46.01 | 3.85 |
2206 | 6715 | 6.228258 | TGGGAACAAACTGATTAGTACAGTC | 58.772 | 40.000 | 0.00 | 0.00 | 40.04 | 3.51 |
2207 | 6716 | 6.182507 | TGGGAACAAACTGATTAGTACAGT | 57.817 | 37.500 | 0.00 | 0.00 | 42.33 | 3.55 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.