Multiple sequence alignment - TraesCS1B01G024200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G024200 chr1B 100.000 2807 0 0 1 2807 11632648 11635454 0.000000e+00 5184.0
1 TraesCS1B01G024200 chr1B 97.531 81 2 0 1 81 47214713 47214633 3.770000e-29 139.0
2 TraesCS1B01G024200 chr1B 76.687 163 33 3 1713 1871 11668077 11668238 4.980000e-13 86.1
3 TraesCS1B01G024200 chr1D 86.377 1336 87 29 414 1684 8463824 8465129 0.000000e+00 1371.0
4 TraesCS1B01G024200 chr1D 90.835 491 40 5 1680 2165 8465297 8465787 0.000000e+00 652.0
5 TraesCS1B01G024200 chr1D 85.424 590 65 12 2185 2769 8466258 8466831 6.690000e-166 593.0
6 TraesCS1B01G024200 chr1D 87.050 278 29 6 999 1270 8025372 8025096 9.770000e-80 307.0
7 TraesCS1B01G024200 chr1D 78.846 156 25 7 1836 1990 8492324 8492472 6.400000e-17 99.0
8 TraesCS1B01G024200 chr1D 78.846 156 25 7 1836 1990 8529062 8529210 6.400000e-17 99.0
9 TraesCS1B01G024200 chr1A 85.747 877 80 21 1338 2174 9980237 9981108 0.000000e+00 885.0
10 TraesCS1B01G024200 chr1A 88.797 482 43 5 818 1290 9979517 9979996 5.210000e-162 580.0
11 TraesCS1B01G024200 chr1A 84.915 590 66 14 2185 2767 9981783 9982356 2.420000e-160 575.0
12 TraesCS1B01G024200 chr1A 85.714 343 22 5 459 799 9979137 9979454 1.250000e-88 337.0
13 TraesCS1B01G024200 chr1A 98.750 80 1 0 1 80 69186018 69185939 2.910000e-30 143.0
14 TraesCS1B01G024200 chr7B 92.701 137 10 0 85 221 15238027 15237891 6.130000e-47 198.0
15 TraesCS1B01G024200 chr5D 90.511 137 13 0 85 221 559221956 559221820 6.180000e-42 182.0
16 TraesCS1B01G024200 chr5D 97.531 81 2 0 1 81 376686692 376686772 3.770000e-29 139.0
17 TraesCS1B01G024200 chr3B 98.780 82 1 0 1 82 780332956 780333037 2.250000e-31 147.0
18 TraesCS1B01G024200 chr6A 98.750 80 1 0 1 80 119334873 119334794 2.910000e-30 143.0
19 TraesCS1B01G024200 chr3D 97.531 81 2 0 1 81 508189533 508189453 3.770000e-29 139.0
20 TraesCS1B01G024200 chr3D 83.571 140 22 1 82 221 103805053 103804915 2.270000e-26 130.0
21 TraesCS1B01G024200 chr2B 96.471 85 2 1 1 84 429459298 429459382 3.770000e-29 139.0
22 TraesCS1B01G024200 chr5A 95.349 86 3 1 1 86 123387543 123387459 4.880000e-28 135.0
23 TraesCS1B01G024200 chr4D 95.349 86 3 1 1 86 471495351 471495435 4.880000e-28 135.0
24 TraesCS1B01G024200 chr4A 82.482 137 24 0 85 221 565419737 565419873 1.370000e-23 121.0
25 TraesCS1B01G024200 chr4A 80.714 140 27 0 82 221 565328479 565328618 2.960000e-20 110.0
26 TraesCS1B01G024200 chr6B 80.986 142 23 4 82 221 553399224 553399363 2.960000e-20 110.0
27 TraesCS1B01G024200 chr7A 80.000 110 22 0 109 218 20760792 20760901 6.440000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G024200 chr1B 11632648 11635454 2806 False 5184.00 5184 100.000000 1 2807 1 chr1B.!!$F1 2806
1 TraesCS1B01G024200 chr1D 8463824 8466831 3007 False 872.00 1371 87.545333 414 2769 3 chr1D.!!$F3 2355
2 TraesCS1B01G024200 chr1A 9979137 9982356 3219 False 594.25 885 86.293250 459 2767 4 chr1A.!!$F1 2308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 119 0.037232 CTAGGGCGCCCATTAGCTAC 60.037 60.0 45.13 17.02 38.92 3.58 F
354 355 0.106918 ACCTTCTGCCGTTGTTTCCA 60.107 50.0 0.00 0.00 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 2233 0.040514 TGACTTGTGCAATTTCCGCG 60.041 50.0 0.0 0.0 0.00 6.46 R
2259 3387 0.521735 CCAAGCTTCGGTAAAGTGCC 59.478 55.0 0.0 0.0 37.31 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.495572 TTTTTCGTAAATTAATTGGGCAATTCT 57.504 25.926 0.39 0.00 40.99 2.40
27 28 8.696410 TTTCGTAAATTAATTGGGCAATTCTC 57.304 30.769 0.39 0.00 40.99 2.87
28 29 7.639113 TCGTAAATTAATTGGGCAATTCTCT 57.361 32.000 0.39 0.00 40.99 3.10
29 30 8.062065 TCGTAAATTAATTGGGCAATTCTCTT 57.938 30.769 0.39 0.00 40.99 2.85
30 31 8.188139 TCGTAAATTAATTGGGCAATTCTCTTC 58.812 33.333 0.39 0.00 40.99 2.87
31 32 8.190784 CGTAAATTAATTGGGCAATTCTCTTCT 58.809 33.333 0.39 0.00 40.99 2.85
32 33 9.875691 GTAAATTAATTGGGCAATTCTCTTCTT 57.124 29.630 0.39 0.00 40.99 2.52
34 35 7.968014 ATTAATTGGGCAATTCTCTTCTTCT 57.032 32.000 0.00 0.00 40.99 2.85
35 36 7.781324 TTAATTGGGCAATTCTCTTCTTCTT 57.219 32.000 0.00 0.00 40.99 2.52
36 37 8.877864 TTAATTGGGCAATTCTCTTCTTCTTA 57.122 30.769 0.00 0.00 40.99 2.10
37 38 7.781324 AATTGGGCAATTCTCTTCTTCTTAA 57.219 32.000 0.00 0.00 36.34 1.85
38 39 7.968014 ATTGGGCAATTCTCTTCTTCTTAAT 57.032 32.000 0.00 0.00 0.00 1.40
39 40 7.781324 TTGGGCAATTCTCTTCTTCTTAATT 57.219 32.000 0.00 0.00 0.00 1.40
40 41 8.877864 TTGGGCAATTCTCTTCTTCTTAATTA 57.122 30.769 0.00 0.00 0.00 1.40
41 42 8.877864 TGGGCAATTCTCTTCTTCTTAATTAA 57.122 30.769 0.00 0.00 0.00 1.40
42 43 9.479549 TGGGCAATTCTCTTCTTCTTAATTAAT 57.520 29.630 0.00 0.00 0.00 1.40
43 44 9.958234 GGGCAATTCTCTTCTTCTTAATTAATC 57.042 33.333 0.00 0.00 0.00 1.75
44 45 9.657121 GGCAATTCTCTTCTTCTTAATTAATCG 57.343 33.333 0.00 0.00 0.00 3.34
50 51 9.973450 TCTCTTCTTCTTAATTAATCGATGAGG 57.027 33.333 19.96 13.97 0.00 3.86
51 52 8.594881 TCTTCTTCTTAATTAATCGATGAGGC 57.405 34.615 0.00 0.00 0.00 4.70
52 53 8.204160 TCTTCTTCTTAATTAATCGATGAGGCA 58.796 33.333 0.00 0.00 0.00 4.75
53 54 8.731275 TTCTTCTTAATTAATCGATGAGGCAA 57.269 30.769 0.00 0.00 0.00 4.52
54 55 8.908786 TCTTCTTAATTAATCGATGAGGCAAT 57.091 30.769 0.00 0.00 0.00 3.56
55 56 9.342308 TCTTCTTAATTAATCGATGAGGCAATT 57.658 29.630 0.00 3.46 0.00 2.32
56 57 9.604626 CTTCTTAATTAATCGATGAGGCAATTC 57.395 33.333 0.00 0.00 0.00 2.17
57 58 8.908786 TCTTAATTAATCGATGAGGCAATTCT 57.091 30.769 0.00 0.00 0.00 2.40
58 59 9.342308 TCTTAATTAATCGATGAGGCAATTCTT 57.658 29.630 0.00 0.00 0.00 2.52
59 60 9.956720 CTTAATTAATCGATGAGGCAATTCTTT 57.043 29.630 0.00 0.00 0.00 2.52
61 62 8.638685 AATTAATCGATGAGGCAATTCTTTTG 57.361 30.769 0.00 0.00 0.00 2.44
62 63 3.492421 TCGATGAGGCAATTCTTTTGC 57.508 42.857 1.76 1.76 44.22 3.68
69 70 2.438868 GCAATTCTTTTGCCTCCGTT 57.561 45.000 0.00 0.00 39.38 4.44
70 71 2.754472 GCAATTCTTTTGCCTCCGTTT 58.246 42.857 0.00 0.00 39.38 3.60
71 72 2.731451 GCAATTCTTTTGCCTCCGTTTC 59.269 45.455 0.00 0.00 39.38 2.78
72 73 2.979813 CAATTCTTTTGCCTCCGTTTCG 59.020 45.455 0.00 0.00 0.00 3.46
73 74 1.956297 TTCTTTTGCCTCCGTTTCGA 58.044 45.000 0.00 0.00 0.00 3.71
74 75 1.956297 TCTTTTGCCTCCGTTTCGAA 58.044 45.000 0.00 0.00 0.00 3.71
75 76 2.290464 TCTTTTGCCTCCGTTTCGAAA 58.710 42.857 6.47 6.47 0.00 3.46
76 77 2.683867 TCTTTTGCCTCCGTTTCGAAAA 59.316 40.909 13.10 0.00 0.00 2.29
77 78 3.128938 TCTTTTGCCTCCGTTTCGAAAAA 59.871 39.130 13.10 0.00 0.00 1.94
107 108 2.405143 GGAATGTTTCCTAGGGCGC 58.595 57.895 9.46 0.00 46.57 6.53
108 109 1.101635 GGAATGTTTCCTAGGGCGCC 61.102 60.000 21.18 21.18 46.57 6.53
109 110 1.076995 AATGTTTCCTAGGGCGCCC 60.077 57.895 39.29 39.29 0.00 6.13
110 111 1.858739 AATGTTTCCTAGGGCGCCCA 61.859 55.000 45.13 29.46 38.92 5.36
111 112 1.645402 ATGTTTCCTAGGGCGCCCAT 61.645 55.000 45.13 31.25 38.92 4.00
112 113 1.076995 GTTTCCTAGGGCGCCCATT 60.077 57.895 45.13 29.50 38.92 3.16
113 114 0.181824 GTTTCCTAGGGCGCCCATTA 59.818 55.000 45.13 29.00 38.92 1.90
114 115 0.472471 TTTCCTAGGGCGCCCATTAG 59.528 55.000 45.13 35.22 38.92 1.73
115 116 2.032681 CCTAGGGCGCCCATTAGC 59.967 66.667 45.13 19.46 38.92 3.09
116 117 2.520536 CCTAGGGCGCCCATTAGCT 61.521 63.158 45.13 27.13 38.92 3.32
117 118 1.192146 CCTAGGGCGCCCATTAGCTA 61.192 60.000 45.13 26.77 38.92 3.32
118 119 0.037232 CTAGGGCGCCCATTAGCTAC 60.037 60.000 45.13 17.02 38.92 3.58
119 120 0.471211 TAGGGCGCCCATTAGCTACT 60.471 55.000 45.13 24.80 38.92 2.57
120 121 1.148498 GGGCGCCCATTAGCTACTT 59.852 57.895 40.73 0.00 35.81 2.24
121 122 0.465642 GGGCGCCCATTAGCTACTTT 60.466 55.000 40.73 0.00 35.81 2.66
122 123 0.663153 GGCGCCCATTAGCTACTTTG 59.337 55.000 18.11 0.00 0.00 2.77
123 124 1.379527 GCGCCCATTAGCTACTTTGT 58.620 50.000 0.00 0.00 0.00 2.83
124 125 1.064060 GCGCCCATTAGCTACTTTGTG 59.936 52.381 0.00 0.00 0.00 3.33
125 126 2.627945 CGCCCATTAGCTACTTTGTGA 58.372 47.619 0.00 0.00 0.00 3.58
126 127 3.006940 CGCCCATTAGCTACTTTGTGAA 58.993 45.455 0.00 0.00 0.00 3.18
127 128 3.438781 CGCCCATTAGCTACTTTGTGAAA 59.561 43.478 0.00 0.00 0.00 2.69
128 129 4.083003 CGCCCATTAGCTACTTTGTGAAAA 60.083 41.667 0.00 0.00 0.00 2.29
129 130 5.563867 CGCCCATTAGCTACTTTGTGAAAAA 60.564 40.000 0.00 0.00 0.00 1.94
148 149 5.453567 AAAAAGCCTGTATTGTTGTCTCC 57.546 39.130 0.00 0.00 0.00 3.71
149 150 4.373156 AAAGCCTGTATTGTTGTCTCCT 57.627 40.909 0.00 0.00 0.00 3.69
150 151 4.373156 AAGCCTGTATTGTTGTCTCCTT 57.627 40.909 0.00 0.00 0.00 3.36
151 152 4.373156 AGCCTGTATTGTTGTCTCCTTT 57.627 40.909 0.00 0.00 0.00 3.11
152 153 4.327680 AGCCTGTATTGTTGTCTCCTTTC 58.672 43.478 0.00 0.00 0.00 2.62
153 154 4.072131 GCCTGTATTGTTGTCTCCTTTCA 58.928 43.478 0.00 0.00 0.00 2.69
154 155 4.518970 GCCTGTATTGTTGTCTCCTTTCAA 59.481 41.667 0.00 0.00 0.00 2.69
155 156 5.335191 GCCTGTATTGTTGTCTCCTTTCAAG 60.335 44.000 0.00 0.00 0.00 3.02
156 157 5.997746 CCTGTATTGTTGTCTCCTTTCAAGA 59.002 40.000 0.00 0.00 0.00 3.02
157 158 6.148480 CCTGTATTGTTGTCTCCTTTCAAGAG 59.852 42.308 0.00 0.00 0.00 2.85
158 159 5.470098 TGTATTGTTGTCTCCTTTCAAGAGC 59.530 40.000 0.00 0.00 0.00 4.09
159 160 2.851195 TGTTGTCTCCTTTCAAGAGCC 58.149 47.619 0.00 0.00 0.00 4.70
160 161 2.172505 TGTTGTCTCCTTTCAAGAGCCA 59.827 45.455 0.00 0.00 0.00 4.75
161 162 3.181440 TGTTGTCTCCTTTCAAGAGCCAT 60.181 43.478 0.00 0.00 0.00 4.40
162 163 3.340814 TGTCTCCTTTCAAGAGCCATC 57.659 47.619 0.00 0.00 0.00 3.51
163 164 2.909006 TGTCTCCTTTCAAGAGCCATCT 59.091 45.455 0.00 0.00 37.39 2.90
164 165 3.055530 TGTCTCCTTTCAAGAGCCATCTC 60.056 47.826 0.00 0.00 39.65 2.75
190 191 9.894783 CTCATTAGAGAATTGATGCCAATAAAG 57.105 33.333 0.00 0.00 44.98 1.85
191 192 9.412460 TCATTAGAGAATTGATGCCAATAAAGT 57.588 29.630 0.00 0.00 41.84 2.66
194 195 7.951347 AGAGAATTGATGCCAATAAAGTTCT 57.049 32.000 0.00 0.00 41.84 3.01
195 196 8.358582 AGAGAATTGATGCCAATAAAGTTCTT 57.641 30.769 0.00 0.00 41.84 2.52
196 197 8.465201 AGAGAATTGATGCCAATAAAGTTCTTC 58.535 33.333 0.00 0.00 41.84 2.87
197 198 7.550712 AGAATTGATGCCAATAAAGTTCTTCC 58.449 34.615 0.00 0.00 41.84 3.46
198 199 7.398332 AGAATTGATGCCAATAAAGTTCTTCCT 59.602 33.333 0.00 0.00 41.84 3.36
199 200 6.515272 TTGATGCCAATAAAGTTCTTCCTC 57.485 37.500 0.00 0.00 0.00 3.71
200 201 4.949856 TGATGCCAATAAAGTTCTTCCTCC 59.050 41.667 0.00 0.00 0.00 4.30
201 202 4.380843 TGCCAATAAAGTTCTTCCTCCA 57.619 40.909 0.00 0.00 0.00 3.86
202 203 4.079253 TGCCAATAAAGTTCTTCCTCCAC 58.921 43.478 0.00 0.00 0.00 4.02
203 204 4.079253 GCCAATAAAGTTCTTCCTCCACA 58.921 43.478 0.00 0.00 0.00 4.17
204 205 4.706962 GCCAATAAAGTTCTTCCTCCACAT 59.293 41.667 0.00 0.00 0.00 3.21
205 206 5.885912 GCCAATAAAGTTCTTCCTCCACATA 59.114 40.000 0.00 0.00 0.00 2.29
206 207 6.183360 GCCAATAAAGTTCTTCCTCCACATAC 60.183 42.308 0.00 0.00 0.00 2.39
207 208 6.884295 CCAATAAAGTTCTTCCTCCACATACA 59.116 38.462 0.00 0.00 0.00 2.29
208 209 7.557719 CCAATAAAGTTCTTCCTCCACATACAT 59.442 37.037 0.00 0.00 0.00 2.29
209 210 8.400947 CAATAAAGTTCTTCCTCCACATACATG 58.599 37.037 0.00 0.00 0.00 3.21
210 211 5.505181 AAGTTCTTCCTCCACATACATGT 57.495 39.130 2.69 2.69 42.84 3.21
211 212 5.505181 AGTTCTTCCTCCACATACATGTT 57.495 39.130 2.30 0.00 39.39 2.71
212 213 6.620877 AGTTCTTCCTCCACATACATGTTA 57.379 37.500 2.30 0.00 39.39 2.41
213 214 7.200434 AGTTCTTCCTCCACATACATGTTAT 57.800 36.000 2.30 0.00 39.39 1.89
214 215 7.633789 AGTTCTTCCTCCACATACATGTTATT 58.366 34.615 2.30 0.00 39.39 1.40
215 216 8.768397 AGTTCTTCCTCCACATACATGTTATTA 58.232 33.333 2.30 0.00 39.39 0.98
216 217 9.391006 GTTCTTCCTCCACATACATGTTATTAA 57.609 33.333 2.30 0.00 39.39 1.40
217 218 9.613428 TTCTTCCTCCACATACATGTTATTAAG 57.387 33.333 2.30 0.00 39.39 1.85
218 219 7.715249 TCTTCCTCCACATACATGTTATTAAGC 59.285 37.037 2.30 0.00 39.39 3.09
219 220 7.136822 TCCTCCACATACATGTTATTAAGCT 57.863 36.000 2.30 0.00 39.39 3.74
220 221 7.217200 TCCTCCACATACATGTTATTAAGCTC 58.783 38.462 2.30 0.00 39.39 4.09
221 222 6.146184 CCTCCACATACATGTTATTAAGCTCG 59.854 42.308 2.30 0.00 39.39 5.03
222 223 6.578944 TCCACATACATGTTATTAAGCTCGT 58.421 36.000 2.30 0.00 39.39 4.18
223 224 6.478673 TCCACATACATGTTATTAAGCTCGTG 59.521 38.462 2.30 0.00 39.39 4.35
224 225 6.257849 CCACATACATGTTATTAAGCTCGTGT 59.742 38.462 2.30 0.00 39.39 4.49
225 226 7.119360 CACATACATGTTATTAAGCTCGTGTG 58.881 38.462 2.30 0.00 39.39 3.82
226 227 6.816640 ACATACATGTTATTAAGCTCGTGTGT 59.183 34.615 2.30 0.00 37.90 3.72
227 228 5.779806 ACATGTTATTAAGCTCGTGTGTC 57.220 39.130 0.00 0.00 0.00 3.67
228 229 4.630069 ACATGTTATTAAGCTCGTGTGTCC 59.370 41.667 0.00 0.00 0.00 4.02
229 230 4.530710 TGTTATTAAGCTCGTGTGTCCT 57.469 40.909 0.00 0.00 0.00 3.85
230 231 4.491676 TGTTATTAAGCTCGTGTGTCCTC 58.508 43.478 0.00 0.00 0.00 3.71
231 232 4.021807 TGTTATTAAGCTCGTGTGTCCTCA 60.022 41.667 0.00 0.00 0.00 3.86
232 233 3.895232 ATTAAGCTCGTGTGTCCTCAT 57.105 42.857 0.00 0.00 0.00 2.90
233 234 2.654749 TAAGCTCGTGTGTCCTCATG 57.345 50.000 0.00 0.00 0.00 3.07
234 235 0.969149 AAGCTCGTGTGTCCTCATGA 59.031 50.000 0.00 0.00 33.18 3.07
235 236 1.189752 AGCTCGTGTGTCCTCATGAT 58.810 50.000 0.00 0.00 33.66 2.45
236 237 1.134877 AGCTCGTGTGTCCTCATGATG 60.135 52.381 0.00 0.00 33.66 3.07
237 238 1.134995 GCTCGTGTGTCCTCATGATGA 60.135 52.381 0.00 0.00 33.66 2.92
238 239 2.807044 CTCGTGTGTCCTCATGATGAG 58.193 52.381 15.38 15.38 43.91 2.90
239 240 1.134995 TCGTGTGTCCTCATGATGAGC 60.135 52.381 16.81 5.11 42.98 4.26
240 241 1.134877 CGTGTGTCCTCATGATGAGCT 60.135 52.381 16.81 0.00 42.98 4.09
241 242 2.548875 GTGTGTCCTCATGATGAGCTC 58.451 52.381 16.81 6.82 42.98 4.09
242 243 2.093816 GTGTGTCCTCATGATGAGCTCA 60.094 50.000 20.79 20.79 42.98 4.26
243 244 2.770232 TGTGTCCTCATGATGAGCTCAT 59.230 45.455 29.09 29.09 45.78 2.90
252 253 3.416253 ATGAGCTCATCACCATGGC 57.584 52.632 23.75 0.00 41.91 4.40
253 254 0.534427 ATGAGCTCATCACCATGGCG 60.534 55.000 23.75 1.26 41.91 5.69
254 255 2.515523 AGCTCATCACCATGGCGC 60.516 61.111 13.04 0.00 33.64 6.53
255 256 2.825387 GCTCATCACCATGGCGCA 60.825 61.111 13.04 0.00 31.19 6.09
256 257 2.831366 GCTCATCACCATGGCGCAG 61.831 63.158 13.04 1.92 31.19 5.18
257 258 2.124612 TCATCACCATGGCGCAGG 60.125 61.111 13.04 10.77 0.00 4.85
258 259 2.438975 CATCACCATGGCGCAGGT 60.439 61.111 13.04 11.53 39.10 4.00
259 260 2.124570 ATCACCATGGCGCAGGTC 60.125 61.111 13.04 0.00 35.52 3.85
260 261 4.758251 TCACCATGGCGCAGGTCG 62.758 66.667 13.04 9.00 35.52 4.79
299 300 9.797642 TTTCATGTATATATGATCTGCCAAAGT 57.202 29.630 12.36 0.00 36.97 2.66
300 301 9.440773 TTCATGTATATATGATCTGCCAAAGTC 57.559 33.333 12.36 0.00 36.97 3.01
301 302 8.596293 TCATGTATATATGATCTGCCAAAGTCA 58.404 33.333 7.99 0.00 32.39 3.41
302 303 8.663025 CATGTATATATGATCTGCCAAAGTCAC 58.337 37.037 3.48 0.00 0.00 3.67
303 304 6.868339 TGTATATATGATCTGCCAAAGTCACG 59.132 38.462 0.00 0.00 0.00 4.35
304 305 2.479566 ATGATCTGCCAAAGTCACGT 57.520 45.000 0.00 0.00 0.00 4.49
305 306 1.795768 TGATCTGCCAAAGTCACGTC 58.204 50.000 0.00 0.00 0.00 4.34
306 307 1.344438 TGATCTGCCAAAGTCACGTCT 59.656 47.619 0.00 0.00 0.00 4.18
307 308 2.224281 TGATCTGCCAAAGTCACGTCTT 60.224 45.455 0.00 0.00 0.00 3.01
308 309 2.325583 TCTGCCAAAGTCACGTCTTT 57.674 45.000 0.00 0.00 38.04 2.52
315 316 4.600012 CAAAGTCACGTCTTTGTCAAGT 57.400 40.909 17.32 0.00 45.08 3.16
316 317 4.334443 CAAAGTCACGTCTTTGTCAAGTG 58.666 43.478 17.32 0.00 45.08 3.16
317 318 3.247006 AGTCACGTCTTTGTCAAGTGT 57.753 42.857 0.00 0.00 34.71 3.55
318 319 3.596214 AGTCACGTCTTTGTCAAGTGTT 58.404 40.909 0.00 0.00 34.71 3.32
319 320 4.000988 AGTCACGTCTTTGTCAAGTGTTT 58.999 39.130 0.00 0.00 34.71 2.83
320 321 5.172934 AGTCACGTCTTTGTCAAGTGTTTA 58.827 37.500 0.00 0.00 34.71 2.01
321 322 5.063060 AGTCACGTCTTTGTCAAGTGTTTAC 59.937 40.000 0.00 0.00 34.71 2.01
322 323 4.930405 TCACGTCTTTGTCAAGTGTTTACA 59.070 37.500 0.00 0.00 34.71 2.41
323 324 5.019498 CACGTCTTTGTCAAGTGTTTACAC 58.981 41.667 4.87 4.87 46.77 2.90
337 338 6.224420 GTGTTTACACTCAGTACATCAACC 57.776 41.667 5.78 0.00 43.25 3.77
338 339 5.989777 GTGTTTACACTCAGTACATCAACCT 59.010 40.000 5.78 0.00 43.25 3.50
339 340 6.482308 GTGTTTACACTCAGTACATCAACCTT 59.518 38.462 5.78 0.00 43.25 3.50
340 341 6.704493 TGTTTACACTCAGTACATCAACCTTC 59.296 38.462 0.00 0.00 30.91 3.46
341 342 6.665992 TTACACTCAGTACATCAACCTTCT 57.334 37.500 0.00 0.00 30.91 2.85
342 343 4.887748 ACACTCAGTACATCAACCTTCTG 58.112 43.478 0.00 0.00 0.00 3.02
343 344 3.681897 CACTCAGTACATCAACCTTCTGC 59.318 47.826 0.00 0.00 0.00 4.26
344 345 3.265791 CTCAGTACATCAACCTTCTGCC 58.734 50.000 0.00 0.00 0.00 4.85
345 346 2.002586 CAGTACATCAACCTTCTGCCG 58.997 52.381 0.00 0.00 0.00 5.69
346 347 1.623811 AGTACATCAACCTTCTGCCGT 59.376 47.619 0.00 0.00 0.00 5.68
347 348 2.038557 AGTACATCAACCTTCTGCCGTT 59.961 45.455 0.00 0.00 0.00 4.44
348 349 1.238439 ACATCAACCTTCTGCCGTTG 58.762 50.000 0.00 0.00 40.58 4.10
349 350 1.238439 CATCAACCTTCTGCCGTTGT 58.762 50.000 0.00 0.00 40.22 3.32
350 351 1.608590 CATCAACCTTCTGCCGTTGTT 59.391 47.619 0.00 0.00 40.22 2.83
351 352 1.757682 TCAACCTTCTGCCGTTGTTT 58.242 45.000 0.00 0.00 40.22 2.83
352 353 1.673920 TCAACCTTCTGCCGTTGTTTC 59.326 47.619 0.00 0.00 40.22 2.78
353 354 1.029681 AACCTTCTGCCGTTGTTTCC 58.970 50.000 0.00 0.00 0.00 3.13
354 355 0.106918 ACCTTCTGCCGTTGTTTCCA 60.107 50.000 0.00 0.00 0.00 3.53
355 356 1.247567 CCTTCTGCCGTTGTTTCCAT 58.752 50.000 0.00 0.00 0.00 3.41
356 357 1.200020 CCTTCTGCCGTTGTTTCCATC 59.800 52.381 0.00 0.00 0.00 3.51
357 358 1.200020 CTTCTGCCGTTGTTTCCATCC 59.800 52.381 0.00 0.00 0.00 3.51
358 359 0.400213 TCTGCCGTTGTTTCCATCCT 59.600 50.000 0.00 0.00 0.00 3.24
359 360 0.804989 CTGCCGTTGTTTCCATCCTC 59.195 55.000 0.00 0.00 0.00 3.71
360 361 0.608035 TGCCGTTGTTTCCATCCTCC 60.608 55.000 0.00 0.00 0.00 4.30
361 362 0.322546 GCCGTTGTTTCCATCCTCCT 60.323 55.000 0.00 0.00 0.00 3.69
362 363 1.886655 GCCGTTGTTTCCATCCTCCTT 60.887 52.381 0.00 0.00 0.00 3.36
363 364 2.514803 CCGTTGTTTCCATCCTCCTTT 58.485 47.619 0.00 0.00 0.00 3.11
364 365 3.681593 CCGTTGTTTCCATCCTCCTTTA 58.318 45.455 0.00 0.00 0.00 1.85
365 366 3.689649 CCGTTGTTTCCATCCTCCTTTAG 59.310 47.826 0.00 0.00 0.00 1.85
366 367 3.127030 CGTTGTTTCCATCCTCCTTTAGC 59.873 47.826 0.00 0.00 0.00 3.09
367 368 4.336280 GTTGTTTCCATCCTCCTTTAGCT 58.664 43.478 0.00 0.00 0.00 3.32
368 369 4.222124 TGTTTCCATCCTCCTTTAGCTC 57.778 45.455 0.00 0.00 0.00 4.09
369 370 3.587061 TGTTTCCATCCTCCTTTAGCTCA 59.413 43.478 0.00 0.00 0.00 4.26
370 371 4.228210 TGTTTCCATCCTCCTTTAGCTCAT 59.772 41.667 0.00 0.00 0.00 2.90
371 372 5.196695 GTTTCCATCCTCCTTTAGCTCATT 58.803 41.667 0.00 0.00 0.00 2.57
372 373 4.428294 TCCATCCTCCTTTAGCTCATTG 57.572 45.455 0.00 0.00 0.00 2.82
373 374 3.782523 TCCATCCTCCTTTAGCTCATTGT 59.217 43.478 0.00 0.00 0.00 2.71
374 375 4.228210 TCCATCCTCCTTTAGCTCATTGTT 59.772 41.667 0.00 0.00 0.00 2.83
375 376 5.428457 TCCATCCTCCTTTAGCTCATTGTTA 59.572 40.000 0.00 0.00 0.00 2.41
376 377 6.101734 TCCATCCTCCTTTAGCTCATTGTTAT 59.898 38.462 0.00 0.00 0.00 1.89
377 378 6.429385 CCATCCTCCTTTAGCTCATTGTTATC 59.571 42.308 0.00 0.00 0.00 1.75
378 379 6.560003 TCCTCCTTTAGCTCATTGTTATCA 57.440 37.500 0.00 0.00 0.00 2.15
379 380 6.957631 TCCTCCTTTAGCTCATTGTTATCAA 58.042 36.000 0.00 0.00 37.98 2.57
380 381 7.050377 TCCTCCTTTAGCTCATTGTTATCAAG 58.950 38.462 0.00 0.00 36.97 3.02
381 382 6.238593 CCTCCTTTAGCTCATTGTTATCAAGC 60.239 42.308 0.00 0.00 36.97 4.01
382 383 6.179756 TCCTTTAGCTCATTGTTATCAAGCA 58.820 36.000 0.00 0.00 36.97 3.91
383 384 6.094048 TCCTTTAGCTCATTGTTATCAAGCAC 59.906 38.462 0.00 0.00 36.97 4.40
384 385 6.127925 CCTTTAGCTCATTGTTATCAAGCACA 60.128 38.462 0.00 0.00 36.97 4.57
385 386 6.816134 TTAGCTCATTGTTATCAAGCACAA 57.184 33.333 0.00 0.00 36.97 3.33
386 387 5.710513 AGCTCATTGTTATCAAGCACAAA 57.289 34.783 0.00 0.00 36.50 2.83
387 388 6.276832 AGCTCATTGTTATCAAGCACAAAT 57.723 33.333 0.00 0.00 36.50 2.32
388 389 6.327934 AGCTCATTGTTATCAAGCACAAATC 58.672 36.000 0.00 0.00 36.50 2.17
389 390 6.152323 AGCTCATTGTTATCAAGCACAAATCT 59.848 34.615 0.00 0.00 36.50 2.40
390 391 6.810182 GCTCATTGTTATCAAGCACAAATCTT 59.190 34.615 0.00 0.00 36.50 2.40
391 392 7.330208 GCTCATTGTTATCAAGCACAAATCTTT 59.670 33.333 0.00 0.00 36.50 2.52
392 393 8.523523 TCATTGTTATCAAGCACAAATCTTTG 57.476 30.769 1.19 1.19 39.23 2.77
393 394 6.768029 TTGTTATCAAGCACAAATCTTTGC 57.232 33.333 2.63 0.00 41.79 3.68
394 395 5.229423 TGTTATCAAGCACAAATCTTTGCC 58.771 37.500 2.63 0.00 41.79 4.52
395 396 2.420628 TCAAGCACAAATCTTTGCCG 57.579 45.000 2.63 0.00 41.79 5.69
396 397 1.952990 TCAAGCACAAATCTTTGCCGA 59.047 42.857 2.63 0.00 41.79 5.54
397 398 2.030893 TCAAGCACAAATCTTTGCCGAG 60.031 45.455 2.63 0.00 41.79 4.63
398 399 0.242017 AGCACAAATCTTTGCCGAGC 59.758 50.000 2.63 3.06 41.79 5.03
399 400 1.067199 GCACAAATCTTTGCCGAGCG 61.067 55.000 2.63 0.00 41.79 5.03
400 401 1.067199 CACAAATCTTTGCCGAGCGC 61.067 55.000 0.00 0.00 41.79 5.92
401 402 1.514873 CAAATCTTTGCCGAGCGCC 60.515 57.895 2.29 0.00 36.24 6.53
402 403 2.700773 AAATCTTTGCCGAGCGCCC 61.701 57.895 2.29 0.00 36.24 6.13
408 409 3.630298 TTGCCGAGCGCCCCAAATA 62.630 57.895 2.29 0.00 36.24 1.40
409 410 2.826738 GCCGAGCGCCCCAAATAA 60.827 61.111 2.29 0.00 0.00 1.40
410 411 2.411504 GCCGAGCGCCCCAAATAAA 61.412 57.895 2.29 0.00 0.00 1.40
411 412 1.431845 CCGAGCGCCCCAAATAAAC 59.568 57.895 2.29 0.00 0.00 2.01
412 413 1.309499 CCGAGCGCCCCAAATAAACA 61.309 55.000 2.29 0.00 0.00 2.83
413 414 0.179174 CGAGCGCCCCAAATAAACAC 60.179 55.000 2.29 0.00 0.00 3.32
414 415 1.173913 GAGCGCCCCAAATAAACACT 58.826 50.000 2.29 0.00 0.00 3.55
415 416 1.544246 GAGCGCCCCAAATAAACACTT 59.456 47.619 2.29 0.00 0.00 3.16
416 417 1.272212 AGCGCCCCAAATAAACACTTG 59.728 47.619 2.29 0.00 0.00 3.16
417 418 1.671556 GCGCCCCAAATAAACACTTGG 60.672 52.381 0.00 0.00 0.00 3.61
418 419 1.671556 CGCCCCAAATAAACACTTGGC 60.672 52.381 0.00 0.00 33.39 4.52
419 420 1.346068 GCCCCAAATAAACACTTGGCA 59.654 47.619 0.00 0.00 37.58 4.92
428 429 1.695114 AACACTTGGCAAAAGGGGGC 61.695 55.000 0.00 0.00 0.00 5.80
431 432 4.328208 TTGGCAAAAGGGGGCAAT 57.672 50.000 0.00 0.00 44.57 3.56
451 452 1.617850 TCCAAGTGCATTTTGCCGAAT 59.382 42.857 8.05 0.00 44.23 3.34
573 574 2.109425 TCCGTGAAGTCGAGATCTCA 57.891 50.000 22.31 7.11 0.00 3.27
578 579 3.362237 CGTGAAGTCGAGATCTCAAACAC 59.638 47.826 22.31 19.36 0.00 3.32
583 584 5.852738 AGTCGAGATCTCAAACACAAATG 57.147 39.130 22.31 2.34 0.00 2.32
638 639 9.854668 TCTGATATAATACTATCCTCTAGCACC 57.145 37.037 0.00 0.00 0.00 5.01
670 671 0.525668 GATCCGTCGTTGATCAGCGT 60.526 55.000 27.64 11.34 38.76 5.07
699 700 7.977293 GTGTACCATGCGTATATATTGTATCCA 59.023 37.037 0.00 0.00 0.00 3.41
760 762 4.051167 CCCCATGACTGCTGGCCA 62.051 66.667 4.71 4.71 32.08 5.36
780 782 1.292223 CCGAACCACCGACATGACT 59.708 57.895 0.00 0.00 0.00 3.41
798 812 1.904852 CTGATGACACCACGCAGCAC 61.905 60.000 0.00 0.00 0.00 4.40
799 813 1.960763 GATGACACCACGCAGCACA 60.961 57.895 0.00 0.00 0.00 4.57
866 914 2.357517 GCACACCACGCAGCTAGT 60.358 61.111 0.00 0.00 0.00 2.57
868 916 1.901650 GCACACCACGCAGCTAGTTC 61.902 60.000 0.00 0.00 0.00 3.01
888 936 0.250467 ACAAGTTGAGATGCGTGGCT 60.250 50.000 10.54 0.00 0.00 4.75
911 959 2.429767 CGCTCCAGCCAGATCTCCA 61.430 63.158 0.00 0.00 37.91 3.86
921 969 5.704515 CCAGCCAGATCTCCAATAAATAGTG 59.295 44.000 0.00 0.00 0.00 2.74
1030 1091 2.158623 AGAGGCAACAATGTCAAGACCA 60.159 45.455 0.00 0.00 41.41 4.02
1106 1167 3.222173 ACAAGCATCCCACTGTTGTTA 57.778 42.857 0.00 0.00 0.00 2.41
1145 1206 0.730840 ACCTATTTTAAGTGCCGCGC 59.269 50.000 0.00 0.00 0.00 6.86
1161 1222 1.328680 CGCGCAAAATCTGATAGCACT 59.671 47.619 8.75 0.00 0.00 4.40
1181 1242 2.203082 TCTCAGAGTGCTGCGGTGT 61.203 57.895 0.00 0.00 42.01 4.16
1185 1246 1.598130 AGAGTGCTGCGGTGTTTCC 60.598 57.895 0.00 0.00 0.00 3.13
1203 1264 5.011635 TGTTTCCGCTGGCTATATATCAGAA 59.988 40.000 14.03 2.02 0.00 3.02
1248 1309 8.048016 AGCCCGGTTATATAGATATAGAGACT 57.952 38.462 0.00 0.00 0.00 3.24
1265 1326 1.734465 GACTGCACTGCAAGGTATGTC 59.266 52.381 4.99 4.29 38.41 3.06
1270 1331 4.331108 TGCACTGCAAGGTATGTCAAATA 58.669 39.130 0.00 0.00 39.30 1.40
1281 1342 4.945543 GGTATGTCAAATAACCGACCCTTT 59.054 41.667 0.00 0.00 0.00 3.11
1282 1343 5.065602 GGTATGTCAAATAACCGACCCTTTC 59.934 44.000 0.00 0.00 0.00 2.62
1286 1347 5.595133 TGTCAAATAACCGACCCTTTCTTTT 59.405 36.000 0.00 0.00 0.00 2.27
1287 1348 6.147581 GTCAAATAACCGACCCTTTCTTTTC 58.852 40.000 0.00 0.00 0.00 2.29
1288 1349 5.049267 TCAAATAACCGACCCTTTCTTTTCG 60.049 40.000 0.00 0.00 0.00 3.46
1289 1350 2.336945 AACCGACCCTTTCTTTTCGT 57.663 45.000 0.00 0.00 0.00 3.85
1290 1351 1.875009 ACCGACCCTTTCTTTTCGTC 58.125 50.000 0.00 0.00 0.00 4.20
1291 1352 1.154197 CCGACCCTTTCTTTTCGTCC 58.846 55.000 0.00 0.00 0.00 4.79
1292 1353 1.270678 CCGACCCTTTCTTTTCGTCCT 60.271 52.381 0.00 0.00 0.00 3.85
1293 1354 2.028748 CCGACCCTTTCTTTTCGTCCTA 60.029 50.000 0.00 0.00 0.00 2.94
1294 1355 2.991866 CGACCCTTTCTTTTCGTCCTAC 59.008 50.000 0.00 0.00 0.00 3.18
1295 1356 2.991866 GACCCTTTCTTTTCGTCCTACG 59.008 50.000 0.00 0.00 44.19 3.51
1386 1640 3.768633 GTGCAAGAGATGGACCGAT 57.231 52.632 0.00 0.00 43.99 4.18
1391 1645 4.867047 GTGCAAGAGATGGACCGATATATG 59.133 45.833 0.00 0.00 43.99 1.78
1416 1670 9.713740 TGTTTAATTTTTGCTTGCTTACATTTG 57.286 25.926 0.00 0.00 0.00 2.32
1433 1687 0.235404 TTGCATGCATATACGCTGCG 59.765 50.000 23.37 21.91 42.62 5.18
1435 1689 1.291184 GCATGCATATACGCTGCGGA 61.291 55.000 26.95 19.92 42.62 5.54
1436 1690 1.147473 CATGCATATACGCTGCGGAA 58.853 50.000 26.95 14.32 42.62 4.30
1443 1697 3.808148 TATACGCTGCGGAACTGCCTG 62.808 57.143 26.95 0.00 39.93 4.85
1451 1705 3.793144 GAACTGCCTGCCGCGAAG 61.793 66.667 8.23 4.45 42.08 3.79
1472 1726 0.764890 AGCCACCAACTACTGCAAGA 59.235 50.000 0.00 0.00 37.43 3.02
1474 1728 2.162681 GCCACCAACTACTGCAAGATT 58.837 47.619 0.00 0.00 37.43 2.40
1520 1774 7.040686 GCAACAAATTAACTCCTTCTGGTAAGA 60.041 37.037 0.00 0.00 34.23 2.10
1526 1780 8.616799 ATTAACTCCTTCTGGTAAGATTCTCT 57.383 34.615 0.00 0.00 30.72 3.10
1527 1781 6.538945 AACTCCTTCTGGTAAGATTCTCTC 57.461 41.667 0.00 0.00 30.72 3.20
1547 1822 3.517901 CTCTATCACTAACACCAACCCCA 59.482 47.826 0.00 0.00 0.00 4.96
1548 1823 4.108570 TCTATCACTAACACCAACCCCAT 58.891 43.478 0.00 0.00 0.00 4.00
1549 1824 2.577606 TCACTAACACCAACCCCATG 57.422 50.000 0.00 0.00 0.00 3.66
1556 1831 0.899253 CACCAACCCCATGCATCACA 60.899 55.000 0.00 0.00 0.00 3.58
1576 1851 1.462616 TGCGCATCCTGCTACAAATT 58.537 45.000 5.66 0.00 42.25 1.82
1579 1854 2.796032 GCGCATCCTGCTACAAATTTCC 60.796 50.000 0.30 0.00 42.25 3.13
1580 1855 2.684881 CGCATCCTGCTACAAATTTCCT 59.315 45.455 0.00 0.00 42.25 3.36
1590 1865 7.095695 TGCTACAAATTTCCTTAGGCAATAC 57.904 36.000 0.00 0.00 0.00 1.89
1594 1869 6.016555 ACAAATTTCCTTAGGCAATACACCT 58.983 36.000 0.00 0.00 41.57 4.00
1626 1906 4.817464 ACAAACAAAATGCATGCATCAGTT 59.183 33.333 32.25 28.72 35.31 3.16
1643 1926 2.164624 CAGTTCCCCAGAAGTCTCGTAG 59.835 54.545 0.00 0.00 33.15 3.51
1655 1938 7.119553 CCAGAAGTCTCGTAGTAGTAAAAGTCT 59.880 40.741 0.00 0.00 0.00 3.24
1662 1945 8.097038 TCTCGTAGTAGTAAAAGTCTCACCTAA 58.903 37.037 0.00 0.00 0.00 2.69
1676 1959 6.013293 AGTCTCACCTAAATAACTCCTTGCTT 60.013 38.462 0.00 0.00 0.00 3.91
1697 2152 8.236585 TGCTTGCATGTATCACCTAATTAATT 57.763 30.769 5.89 5.89 0.00 1.40
1725 2182 3.631250 TCATACCAATGAAGGGAAAGGC 58.369 45.455 0.00 0.00 39.20 4.35
1776 2233 2.349817 CGATCTGTGCACCAAGAACAAC 60.350 50.000 15.69 4.61 0.00 3.32
1779 2236 1.654137 GTGCACCAAGAACAACGCG 60.654 57.895 5.22 3.53 0.00 6.01
1788 2245 0.665835 AGAACAACGCGGAAATTGCA 59.334 45.000 12.47 0.00 0.00 4.08
1795 2252 0.040514 CGCGGAAATTGCACAAGTCA 60.041 50.000 0.00 0.00 0.00 3.41
1873 2330 9.423061 GAGTGTTTATGTTGCCTTCAATAATTT 57.577 29.630 0.00 0.00 34.29 1.82
1881 2338 4.567971 TGCCTTCAATAATTTGTGCCAAG 58.432 39.130 0.00 0.00 34.32 3.61
1921 2380 2.479275 CTGTATGATGCATCTTCCTGCG 59.521 50.000 26.32 6.45 45.30 5.18
1945 2404 4.095632 AGGATGTATAGTGCTCGATCATCG 59.904 45.833 0.00 0.00 42.10 3.84
1958 2417 6.073494 TGCTCGATCATCGTTTCTTGTTAAAA 60.073 34.615 7.00 0.00 41.35 1.52
1959 2418 6.795114 GCTCGATCATCGTTTCTTGTTAAAAA 59.205 34.615 7.00 0.00 41.35 1.94
2010 2469 0.531090 TGACGCCACGCTTTTAGTGT 60.531 50.000 0.00 0.00 39.99 3.55
2050 2510 8.964420 ACAAATTATTATGGTGTTTCGTTCTG 57.036 30.769 0.00 0.00 0.00 3.02
2056 2516 1.566018 GGTGTTTCGTTCTGGCGAGG 61.566 60.000 0.00 0.00 42.10 4.63
2068 2530 0.881118 TGGCGAGGCATCTTGTTTTC 59.119 50.000 0.00 0.00 0.00 2.29
2074 2536 4.470462 CGAGGCATCTTGTTTTCTTCTTG 58.530 43.478 0.00 0.00 0.00 3.02
2080 2542 6.416514 GCATCTTGTTTTCTTCTTGCTTTTG 58.583 36.000 0.00 0.00 0.00 2.44
2098 2560 5.450550 GCTTTTGATAGGGGTAAGCAATGTC 60.451 44.000 0.00 0.00 40.58 3.06
2101 2563 3.199071 TGATAGGGGTAAGCAATGTCGTT 59.801 43.478 0.00 0.00 0.00 3.85
2112 2574 1.066908 CAATGTCGTTGTTGGCAAGGT 59.933 47.619 0.00 0.00 40.29 3.50
2139 2601 6.493115 TCTTTTGAGGTTAATCAAAGCATGGA 59.507 34.615 4.82 0.00 46.70 3.41
2166 2628 4.154015 TCAATTAGTGTTTCAGCCATCGTG 59.846 41.667 0.00 0.00 0.00 4.35
2167 2629 3.394674 TTAGTGTTTCAGCCATCGTGA 57.605 42.857 0.00 0.00 0.00 4.35
2174 2636 1.725641 TCAGCCATCGTGAATGTGTC 58.274 50.000 0.00 0.00 33.13 3.67
2175 2637 0.729116 CAGCCATCGTGAATGTGTCC 59.271 55.000 0.00 0.00 33.13 4.02
2176 2638 0.324614 AGCCATCGTGAATGTGTCCA 59.675 50.000 0.00 0.00 33.13 4.02
2177 2639 1.065199 AGCCATCGTGAATGTGTCCAT 60.065 47.619 0.00 0.00 33.13 3.41
2179 2641 2.942376 GCCATCGTGAATGTGTCCATAA 59.058 45.455 0.00 0.00 33.13 1.90
2180 2642 3.376859 GCCATCGTGAATGTGTCCATAAA 59.623 43.478 0.00 0.00 33.13 1.40
2181 2643 4.730613 GCCATCGTGAATGTGTCCATAAAC 60.731 45.833 0.00 0.00 33.13 2.01
2182 2644 4.635765 CCATCGTGAATGTGTCCATAAACT 59.364 41.667 0.00 0.00 33.13 2.66
2183 2645 5.123820 CCATCGTGAATGTGTCCATAAACTT 59.876 40.000 0.00 0.00 33.13 2.66
2191 3318 8.035984 TGAATGTGTCCATAAACTTGATACGTA 58.964 33.333 0.00 0.00 0.00 3.57
2193 3320 5.801444 TGTGTCCATAAACTTGATACGTACG 59.199 40.000 15.01 15.01 0.00 3.67
2203 3330 4.387862 ACTTGATACGTACGAAGCTTTTGG 59.612 41.667 24.41 5.86 0.00 3.28
2227 3355 5.739161 GCTCAACTTCACAGTAAACTTTGTG 59.261 40.000 0.00 0.00 44.62 3.33
2242 3370 2.795175 TTGTGAACTCTCGTCCACTC 57.205 50.000 0.00 0.00 0.00 3.51
2243 3371 1.982660 TGTGAACTCTCGTCCACTCT 58.017 50.000 0.00 0.00 0.00 3.24
2244 3372 3.136009 TGTGAACTCTCGTCCACTCTA 57.864 47.619 0.00 0.00 0.00 2.43
2276 3404 1.523758 CTGGCACTTTACCGAAGCTT 58.476 50.000 0.00 0.00 39.04 3.74
2332 3460 4.525411 ACCGAGAACGTGTAAACAAAAG 57.475 40.909 0.00 0.00 37.88 2.27
2356 3484 8.894768 AGCAGTAATGTTTTCATAGATCCTAC 57.105 34.615 0.00 0.00 39.94 3.18
2394 3522 8.035394 ACGAGATATGACAACAAATAAGTCACT 58.965 33.333 0.00 0.00 44.15 3.41
2413 3541 9.778741 AAGTCACTAAACTATGTGAAATTCTGA 57.221 29.630 0.00 0.00 43.59 3.27
2443 3571 4.415881 TCTTTGGAGACTAACAACTGCA 57.584 40.909 0.00 0.00 33.07 4.41
2479 3607 7.336931 AGCCATACTGATACTACCAAACTTTTG 59.663 37.037 0.00 0.00 37.90 2.44
2481 3609 9.226606 CCATACTGATACTACCAAACTTTTGAA 57.773 33.333 3.17 0.00 40.55 2.69
2484 3612 8.154649 ACTGATACTACCAAACTTTTGAAGTG 57.845 34.615 14.83 5.81 41.91 3.16
2485 3613 7.773690 ACTGATACTACCAAACTTTTGAAGTGT 59.226 33.333 14.83 10.69 41.91 3.55
2486 3614 8.514330 TGATACTACCAAACTTTTGAAGTGTT 57.486 30.769 14.83 6.87 41.91 3.32
2574 3702 9.807649 ATTTCCTGATGAAACAAATATAAGCAC 57.192 29.630 0.00 0.00 45.38 4.40
2577 3705 8.623903 TCCTGATGAAACAAATATAAGCACATC 58.376 33.333 0.00 0.00 34.28 3.06
2578 3706 8.627403 CCTGATGAAACAAATATAAGCACATCT 58.373 33.333 0.00 0.00 34.62 2.90
2727 3859 6.375174 TCATGTGTAAATAAACTGCTCAGCAT 59.625 34.615 0.00 0.00 38.13 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.495572 AGAATTGCCCAATTAATTTACGAAAAA 57.504 25.926 6.25 0.00 40.77 1.94
4 5 7.639113 AGAGAATTGCCCAATTAATTTACGA 57.361 32.000 6.25 0.00 40.77 3.43
6 7 9.875691 AAGAAGAGAATTGCCCAATTAATTTAC 57.124 29.630 6.25 0.00 40.77 2.01
8 9 8.819845 AGAAGAAGAGAATTGCCCAATTAATTT 58.180 29.630 6.25 2.19 40.77 1.82
9 10 8.371571 AGAAGAAGAGAATTGCCCAATTAATT 57.628 30.769 6.25 0.00 40.77 1.40
10 11 7.968014 AGAAGAAGAGAATTGCCCAATTAAT 57.032 32.000 6.25 0.00 40.77 1.40
11 12 7.781324 AAGAAGAAGAGAATTGCCCAATTAA 57.219 32.000 6.25 0.00 40.77 1.40
12 13 8.877864 TTAAGAAGAAGAGAATTGCCCAATTA 57.122 30.769 6.25 0.00 40.77 1.40
13 14 7.781324 TTAAGAAGAAGAGAATTGCCCAATT 57.219 32.000 5.97 5.97 43.14 2.32
14 15 7.968014 ATTAAGAAGAAGAGAATTGCCCAAT 57.032 32.000 0.00 0.00 0.00 3.16
15 16 7.781324 AATTAAGAAGAAGAGAATTGCCCAA 57.219 32.000 0.00 0.00 0.00 4.12
16 17 8.877864 TTAATTAAGAAGAAGAGAATTGCCCA 57.122 30.769 0.00 0.00 0.00 5.36
17 18 9.958234 GATTAATTAAGAAGAAGAGAATTGCCC 57.042 33.333 3.94 0.00 0.00 5.36
18 19 9.657121 CGATTAATTAAGAAGAAGAGAATTGCC 57.343 33.333 3.94 0.00 0.00 4.52
24 25 9.973450 CCTCATCGATTAATTAAGAAGAAGAGA 57.027 33.333 21.25 12.30 0.00 3.10
25 26 8.707839 GCCTCATCGATTAATTAAGAAGAAGAG 58.292 37.037 16.89 16.89 0.00 2.85
26 27 8.204160 TGCCTCATCGATTAATTAAGAAGAAGA 58.796 33.333 3.94 5.03 0.00 2.87
27 28 8.370493 TGCCTCATCGATTAATTAAGAAGAAG 57.630 34.615 3.94 1.26 0.00 2.85
28 29 8.731275 TTGCCTCATCGATTAATTAAGAAGAA 57.269 30.769 3.94 0.00 0.00 2.52
29 30 8.908786 ATTGCCTCATCGATTAATTAAGAAGA 57.091 30.769 3.94 3.72 0.00 2.87
30 31 9.604626 GAATTGCCTCATCGATTAATTAAGAAG 57.395 33.333 3.94 0.00 0.00 2.85
31 32 9.342308 AGAATTGCCTCATCGATTAATTAAGAA 57.658 29.630 3.94 0.00 0.00 2.52
32 33 8.908786 AGAATTGCCTCATCGATTAATTAAGA 57.091 30.769 3.94 0.00 0.00 2.10
33 34 9.956720 AAAGAATTGCCTCATCGATTAATTAAG 57.043 29.630 3.94 0.00 0.00 1.85
35 36 9.734620 CAAAAGAATTGCCTCATCGATTAATTA 57.265 29.630 0.00 0.00 0.00 1.40
36 37 7.223387 GCAAAAGAATTGCCTCATCGATTAATT 59.777 33.333 0.00 0.00 39.38 1.40
37 38 6.698766 GCAAAAGAATTGCCTCATCGATTAAT 59.301 34.615 0.00 0.00 39.38 1.40
38 39 6.035843 GCAAAAGAATTGCCTCATCGATTAA 58.964 36.000 0.00 0.00 39.38 1.40
39 40 5.581605 GCAAAAGAATTGCCTCATCGATTA 58.418 37.500 0.00 0.00 39.38 1.75
40 41 4.427312 GCAAAAGAATTGCCTCATCGATT 58.573 39.130 0.00 0.00 39.38 3.34
41 42 4.037858 GCAAAAGAATTGCCTCATCGAT 57.962 40.909 1.80 0.00 39.38 3.59
42 43 3.492421 GCAAAAGAATTGCCTCATCGA 57.508 42.857 1.80 0.00 39.38 3.59
50 51 2.438868 AACGGAGGCAAAAGAATTGC 57.561 45.000 4.64 4.64 44.22 3.56
51 52 2.979813 CGAAACGGAGGCAAAAGAATTG 59.020 45.455 0.00 0.00 0.00 2.32
52 53 2.882137 TCGAAACGGAGGCAAAAGAATT 59.118 40.909 0.00 0.00 0.00 2.17
53 54 2.500229 TCGAAACGGAGGCAAAAGAAT 58.500 42.857 0.00 0.00 0.00 2.40
54 55 1.956297 TCGAAACGGAGGCAAAAGAA 58.044 45.000 0.00 0.00 0.00 2.52
55 56 1.956297 TTCGAAACGGAGGCAAAAGA 58.044 45.000 0.00 0.00 0.00 2.52
56 57 2.766970 TTTCGAAACGGAGGCAAAAG 57.233 45.000 6.47 0.00 0.00 2.27
57 58 3.505464 TTTTTCGAAACGGAGGCAAAA 57.495 38.095 10.79 0.00 0.00 2.44
90 91 1.101635 GGGCGCCCTAGGAAACATTC 61.102 60.000 38.76 6.46 0.00 2.67
91 92 1.076995 GGGCGCCCTAGGAAACATT 60.077 57.895 38.76 0.00 0.00 2.71
92 93 1.645402 ATGGGCGCCCTAGGAAACAT 61.645 55.000 43.34 24.75 36.94 2.71
93 94 1.858739 AATGGGCGCCCTAGGAAACA 61.859 55.000 43.34 23.54 36.94 2.83
94 95 0.181824 TAATGGGCGCCCTAGGAAAC 59.818 55.000 43.34 17.51 36.94 2.78
95 96 0.472471 CTAATGGGCGCCCTAGGAAA 59.528 55.000 43.34 25.16 36.94 3.13
96 97 2.052047 GCTAATGGGCGCCCTAGGAA 62.052 60.000 43.34 25.97 36.94 3.36
97 98 2.516888 GCTAATGGGCGCCCTAGGA 61.517 63.158 43.34 26.39 36.94 2.94
98 99 1.192146 TAGCTAATGGGCGCCCTAGG 61.192 60.000 43.34 29.56 37.29 3.02
99 100 0.037232 GTAGCTAATGGGCGCCCTAG 60.037 60.000 43.34 35.42 37.29 3.02
100 101 0.471211 AGTAGCTAATGGGCGCCCTA 60.471 55.000 43.34 30.35 37.29 3.53
101 102 1.345715 AAGTAGCTAATGGGCGCCCT 61.346 55.000 43.34 28.71 37.29 5.19
102 103 0.465642 AAAGTAGCTAATGGGCGCCC 60.466 55.000 39.40 39.40 37.29 6.13
103 104 0.663153 CAAAGTAGCTAATGGGCGCC 59.337 55.000 21.18 21.18 37.29 6.53
104 105 1.064060 CACAAAGTAGCTAATGGGCGC 59.936 52.381 0.00 0.00 37.29 6.53
105 106 2.627945 TCACAAAGTAGCTAATGGGCG 58.372 47.619 0.00 0.00 37.29 6.13
106 107 5.385509 TTTTCACAAAGTAGCTAATGGGC 57.614 39.130 0.00 0.00 0.00 5.36
126 127 5.140454 AGGAGACAACAATACAGGCTTTTT 58.860 37.500 0.00 0.00 0.00 1.94
127 128 4.729868 AGGAGACAACAATACAGGCTTTT 58.270 39.130 0.00 0.00 0.00 2.27
128 129 4.373156 AGGAGACAACAATACAGGCTTT 57.627 40.909 0.00 0.00 0.00 3.51
129 130 4.373156 AAGGAGACAACAATACAGGCTT 57.627 40.909 0.00 0.00 0.00 4.35
130 131 4.202461 TGAAAGGAGACAACAATACAGGCT 60.202 41.667 0.00 0.00 0.00 4.58
131 132 4.072131 TGAAAGGAGACAACAATACAGGC 58.928 43.478 0.00 0.00 0.00 4.85
132 133 5.997746 TCTTGAAAGGAGACAACAATACAGG 59.002 40.000 0.00 0.00 0.00 4.00
133 134 6.348050 GCTCTTGAAAGGAGACAACAATACAG 60.348 42.308 0.00 0.00 33.03 2.74
134 135 5.470098 GCTCTTGAAAGGAGACAACAATACA 59.530 40.000 0.00 0.00 33.03 2.29
135 136 5.106515 GGCTCTTGAAAGGAGACAACAATAC 60.107 44.000 0.00 0.00 38.61 1.89
136 137 5.003804 GGCTCTTGAAAGGAGACAACAATA 58.996 41.667 0.00 0.00 38.61 1.90
137 138 3.823304 GGCTCTTGAAAGGAGACAACAAT 59.177 43.478 0.00 0.00 38.61 2.71
138 139 3.214328 GGCTCTTGAAAGGAGACAACAA 58.786 45.455 0.00 0.00 38.61 2.83
139 140 2.172505 TGGCTCTTGAAAGGAGACAACA 59.827 45.455 0.00 0.00 44.73 3.33
140 141 2.851195 TGGCTCTTGAAAGGAGACAAC 58.149 47.619 0.00 0.00 44.73 3.32
143 144 3.530535 GAGATGGCTCTTGAAAGGAGAC 58.469 50.000 0.00 0.00 39.17 3.36
144 145 3.902881 GAGATGGCTCTTGAAAGGAGA 57.097 47.619 0.00 0.00 38.16 3.71
160 161 8.164733 ATTGGCATCAATTCTCTAATGAGAGAT 58.835 33.333 10.81 0.00 44.69 2.75
161 162 7.515586 ATTGGCATCAATTCTCTAATGAGAGA 58.484 34.615 5.59 5.59 44.69 3.10
162 163 7.747155 ATTGGCATCAATTCTCTAATGAGAG 57.253 36.000 0.00 0.00 41.82 3.20
163 164 9.631257 TTTATTGGCATCAATTCTCTAATGAGA 57.369 29.630 0.00 0.00 43.28 3.27
164 165 9.894783 CTTTATTGGCATCAATTCTCTAATGAG 57.105 33.333 0.00 0.00 42.90 2.90
165 166 9.412460 ACTTTATTGGCATCAATTCTCTAATGA 57.588 29.630 0.00 0.00 42.90 2.57
168 169 9.466497 AGAACTTTATTGGCATCAATTCTCTAA 57.534 29.630 0.00 0.00 42.90 2.10
169 170 9.466497 AAGAACTTTATTGGCATCAATTCTCTA 57.534 29.630 0.00 0.00 42.90 2.43
170 171 7.951347 AGAACTTTATTGGCATCAATTCTCT 57.049 32.000 0.00 0.00 42.90 3.10
171 172 7.704047 GGAAGAACTTTATTGGCATCAATTCTC 59.296 37.037 0.00 0.00 42.90 2.87
172 173 7.398332 AGGAAGAACTTTATTGGCATCAATTCT 59.602 33.333 0.00 0.00 42.90 2.40
173 174 7.550712 AGGAAGAACTTTATTGGCATCAATTC 58.449 34.615 0.00 0.00 42.90 2.17
174 175 7.364144 GGAGGAAGAACTTTATTGGCATCAATT 60.364 37.037 0.00 0.00 42.90 2.32
175 176 6.097412 GGAGGAAGAACTTTATTGGCATCAAT 59.903 38.462 0.00 0.00 44.87 2.57
176 177 5.418840 GGAGGAAGAACTTTATTGGCATCAA 59.581 40.000 0.00 0.00 37.28 2.57
177 178 4.949856 GGAGGAAGAACTTTATTGGCATCA 59.050 41.667 0.00 0.00 0.00 3.07
178 179 4.949856 TGGAGGAAGAACTTTATTGGCATC 59.050 41.667 0.00 0.00 0.00 3.91
179 180 4.706962 GTGGAGGAAGAACTTTATTGGCAT 59.293 41.667 0.00 0.00 0.00 4.40
180 181 4.079253 GTGGAGGAAGAACTTTATTGGCA 58.921 43.478 0.00 0.00 0.00 4.92
181 182 4.079253 TGTGGAGGAAGAACTTTATTGGC 58.921 43.478 0.00 0.00 0.00 4.52
182 183 6.884295 TGTATGTGGAGGAAGAACTTTATTGG 59.116 38.462 0.00 0.00 0.00 3.16
183 184 7.921786 TGTATGTGGAGGAAGAACTTTATTG 57.078 36.000 0.00 0.00 0.00 1.90
184 185 8.109634 ACATGTATGTGGAGGAAGAACTTTATT 58.890 33.333 0.00 0.00 40.03 1.40
185 186 7.633789 ACATGTATGTGGAGGAAGAACTTTAT 58.366 34.615 0.00 0.00 40.03 1.40
186 187 7.016153 ACATGTATGTGGAGGAAGAACTTTA 57.984 36.000 0.00 0.00 40.03 1.85
187 188 5.880901 ACATGTATGTGGAGGAAGAACTTT 58.119 37.500 0.00 0.00 40.03 2.66
188 189 5.505181 ACATGTATGTGGAGGAAGAACTT 57.495 39.130 0.00 0.00 40.03 2.66
189 190 5.505181 AACATGTATGTGGAGGAAGAACT 57.495 39.130 0.00 0.00 41.61 3.01
190 191 7.865706 AATAACATGTATGTGGAGGAAGAAC 57.134 36.000 0.00 0.00 41.61 3.01
191 192 9.613428 CTTAATAACATGTATGTGGAGGAAGAA 57.387 33.333 0.00 0.00 41.61 2.52
192 193 7.715249 GCTTAATAACATGTATGTGGAGGAAGA 59.285 37.037 0.00 0.00 41.61 2.87
193 194 7.716998 AGCTTAATAACATGTATGTGGAGGAAG 59.283 37.037 0.00 1.66 41.61 3.46
194 195 7.573710 AGCTTAATAACATGTATGTGGAGGAA 58.426 34.615 0.00 0.00 41.61 3.36
195 196 7.136822 AGCTTAATAACATGTATGTGGAGGA 57.863 36.000 0.00 0.00 41.61 3.71
196 197 6.146184 CGAGCTTAATAACATGTATGTGGAGG 59.854 42.308 0.00 0.00 41.61 4.30
197 198 6.701841 ACGAGCTTAATAACATGTATGTGGAG 59.298 38.462 0.00 0.00 41.61 3.86
198 199 6.478673 CACGAGCTTAATAACATGTATGTGGA 59.521 38.462 0.00 0.00 41.61 4.02
199 200 6.257849 ACACGAGCTTAATAACATGTATGTGG 59.742 38.462 0.00 0.00 41.61 4.17
200 201 7.119360 CACACGAGCTTAATAACATGTATGTG 58.881 38.462 0.00 0.00 41.61 3.21
201 202 6.816640 ACACACGAGCTTAATAACATGTATGT 59.183 34.615 0.00 0.00 44.20 2.29
202 203 7.234187 ACACACGAGCTTAATAACATGTATG 57.766 36.000 0.00 0.00 0.00 2.39
203 204 6.479001 GGACACACGAGCTTAATAACATGTAT 59.521 38.462 0.00 0.00 0.00 2.29
204 205 5.808540 GGACACACGAGCTTAATAACATGTA 59.191 40.000 0.00 0.00 0.00 2.29
205 206 4.630069 GGACACACGAGCTTAATAACATGT 59.370 41.667 0.00 0.00 0.00 3.21
206 207 4.870426 AGGACACACGAGCTTAATAACATG 59.130 41.667 0.00 0.00 0.00 3.21
207 208 5.086104 AGGACACACGAGCTTAATAACAT 57.914 39.130 0.00 0.00 0.00 2.71
208 209 4.021807 TGAGGACACACGAGCTTAATAACA 60.022 41.667 0.00 0.00 0.00 2.41
209 210 4.491676 TGAGGACACACGAGCTTAATAAC 58.508 43.478 0.00 0.00 0.00 1.89
210 211 4.794278 TGAGGACACACGAGCTTAATAA 57.206 40.909 0.00 0.00 0.00 1.40
211 212 4.401202 TCATGAGGACACACGAGCTTAATA 59.599 41.667 0.00 0.00 0.00 0.98
212 213 3.195610 TCATGAGGACACACGAGCTTAAT 59.804 43.478 0.00 0.00 0.00 1.40
213 214 2.560981 TCATGAGGACACACGAGCTTAA 59.439 45.455 0.00 0.00 0.00 1.85
214 215 2.167662 TCATGAGGACACACGAGCTTA 58.832 47.619 0.00 0.00 0.00 3.09
215 216 0.969149 TCATGAGGACACACGAGCTT 59.031 50.000 0.00 0.00 0.00 3.74
216 217 1.134877 CATCATGAGGACACACGAGCT 60.135 52.381 0.00 0.00 0.00 4.09
217 218 1.134995 TCATCATGAGGACACACGAGC 60.135 52.381 5.84 0.00 0.00 5.03
218 219 2.807044 CTCATCATGAGGACACACGAG 58.193 52.381 5.84 0.00 40.71 4.18
219 220 1.134995 GCTCATCATGAGGACACACGA 60.135 52.381 16.70 0.00 44.43 4.35
220 221 1.134877 AGCTCATCATGAGGACACACG 60.135 52.381 16.70 0.00 44.43 4.49
221 222 2.093816 TGAGCTCATCATGAGGACACAC 60.094 50.000 13.74 1.42 44.43 3.82
222 223 2.181975 TGAGCTCATCATGAGGACACA 58.818 47.619 13.74 6.06 44.43 3.72
223 224 2.975732 TGAGCTCATCATGAGGACAC 57.024 50.000 13.74 1.72 44.43 3.67
234 235 0.534427 CGCCATGGTGATGAGCTCAT 60.534 55.000 29.09 29.09 39.70 2.90
235 236 1.153309 CGCCATGGTGATGAGCTCA 60.153 57.895 21.19 20.79 0.00 4.26
236 237 2.541120 GCGCCATGGTGATGAGCTC 61.541 63.158 29.49 6.82 33.18 4.09
237 238 2.515523 GCGCCATGGTGATGAGCT 60.516 61.111 29.49 0.00 33.18 4.09
238 239 2.825387 TGCGCCATGGTGATGAGC 60.825 61.111 29.49 16.48 35.15 4.26
239 240 2.184830 CCTGCGCCATGGTGATGAG 61.185 63.158 29.49 18.69 0.00 2.90
240 241 2.124612 CCTGCGCCATGGTGATGA 60.125 61.111 29.49 10.44 0.00 2.92
241 242 2.438975 ACCTGCGCCATGGTGATG 60.439 61.111 29.49 18.48 34.90 3.07
242 243 2.124570 GACCTGCGCCATGGTGAT 60.125 61.111 29.49 10.36 36.59 3.06
243 244 4.758251 CGACCTGCGCCATGGTGA 62.758 66.667 29.49 12.75 36.59 4.02
273 274 9.797642 ACTTTGGCAGATCATATATACATGAAA 57.202 29.630 0.00 0.00 38.39 2.69
274 275 9.440773 GACTTTGGCAGATCATATATACATGAA 57.559 33.333 0.00 0.00 38.39 2.57
275 276 8.596293 TGACTTTGGCAGATCATATATACATGA 58.404 33.333 0.00 0.00 39.20 3.07
276 277 8.663025 GTGACTTTGGCAGATCATATATACATG 58.337 37.037 0.00 0.00 0.00 3.21
277 278 7.547019 CGTGACTTTGGCAGATCATATATACAT 59.453 37.037 0.00 0.00 0.00 2.29
278 279 6.868339 CGTGACTTTGGCAGATCATATATACA 59.132 38.462 0.00 0.00 0.00 2.29
279 280 6.868864 ACGTGACTTTGGCAGATCATATATAC 59.131 38.462 0.00 0.00 0.00 1.47
280 281 6.993079 ACGTGACTTTGGCAGATCATATATA 58.007 36.000 0.00 0.00 0.00 0.86
281 282 5.858381 ACGTGACTTTGGCAGATCATATAT 58.142 37.500 0.00 0.00 0.00 0.86
282 283 5.069119 AGACGTGACTTTGGCAGATCATATA 59.931 40.000 0.00 0.00 0.00 0.86
283 284 4.122776 GACGTGACTTTGGCAGATCATAT 58.877 43.478 0.00 0.00 0.00 1.78
284 285 3.195610 AGACGTGACTTTGGCAGATCATA 59.804 43.478 0.00 0.00 0.00 2.15
285 286 2.027745 AGACGTGACTTTGGCAGATCAT 60.028 45.455 0.00 0.00 0.00 2.45
286 287 1.344438 AGACGTGACTTTGGCAGATCA 59.656 47.619 0.00 0.00 0.00 2.92
287 288 2.086054 AGACGTGACTTTGGCAGATC 57.914 50.000 0.00 0.00 0.00 2.75
288 289 2.550830 AAGACGTGACTTTGGCAGAT 57.449 45.000 0.00 0.00 0.00 2.90
289 290 2.325583 AAAGACGTGACTTTGGCAGA 57.674 45.000 0.00 0.00 38.45 4.26
295 296 4.000988 ACACTTGACAAAGACGTGACTTT 58.999 39.130 11.12 0.00 40.16 2.66
296 297 3.596214 ACACTTGACAAAGACGTGACTT 58.404 40.909 11.12 0.00 36.84 3.01
297 298 3.247006 ACACTTGACAAAGACGTGACT 57.753 42.857 11.12 0.00 36.84 3.41
298 299 4.336532 AAACACTTGACAAAGACGTGAC 57.663 40.909 11.12 0.00 36.84 3.67
299 300 4.930405 TGTAAACACTTGACAAAGACGTGA 59.070 37.500 11.12 0.00 36.84 4.35
300 301 5.019498 GTGTAAACACTTGACAAAGACGTG 58.981 41.667 5.99 4.28 43.25 4.49
301 302 5.212589 GTGTAAACACTTGACAAAGACGT 57.787 39.130 5.99 0.00 43.25 4.34
314 315 5.989777 AGGTTGATGTACTGAGTGTAAACAC 59.010 40.000 5.07 5.07 46.77 3.32
315 316 6.169557 AGGTTGATGTACTGAGTGTAAACA 57.830 37.500 0.00 0.00 32.25 2.83
316 317 6.929606 AGAAGGTTGATGTACTGAGTGTAAAC 59.070 38.462 0.00 0.00 32.25 2.01
317 318 6.929049 CAGAAGGTTGATGTACTGAGTGTAAA 59.071 38.462 0.00 0.00 32.25 2.01
318 319 6.455647 CAGAAGGTTGATGTACTGAGTGTAA 58.544 40.000 0.00 0.00 32.25 2.41
319 320 5.566826 GCAGAAGGTTGATGTACTGAGTGTA 60.567 44.000 0.00 0.00 0.00 2.90
320 321 4.800914 GCAGAAGGTTGATGTACTGAGTGT 60.801 45.833 0.00 0.00 0.00 3.55
321 322 3.681897 GCAGAAGGTTGATGTACTGAGTG 59.318 47.826 0.00 0.00 0.00 3.51
322 323 3.307059 GGCAGAAGGTTGATGTACTGAGT 60.307 47.826 0.00 0.00 0.00 3.41
323 324 3.265791 GGCAGAAGGTTGATGTACTGAG 58.734 50.000 0.00 0.00 0.00 3.35
324 325 2.353704 CGGCAGAAGGTTGATGTACTGA 60.354 50.000 0.00 0.00 0.00 3.41
325 326 2.002586 CGGCAGAAGGTTGATGTACTG 58.997 52.381 0.00 0.00 0.00 2.74
326 327 1.623811 ACGGCAGAAGGTTGATGTACT 59.376 47.619 0.00 0.00 0.00 2.73
327 328 2.094762 ACGGCAGAAGGTTGATGTAC 57.905 50.000 0.00 0.00 0.00 2.90
328 329 2.224426 ACAACGGCAGAAGGTTGATGTA 60.224 45.455 10.51 0.00 44.80 2.29
329 330 1.238439 CAACGGCAGAAGGTTGATGT 58.762 50.000 0.00 0.00 44.80 3.06
330 331 1.238439 ACAACGGCAGAAGGTTGATG 58.762 50.000 10.51 0.00 44.80 3.07
331 332 1.981256 AACAACGGCAGAAGGTTGAT 58.019 45.000 10.51 0.00 44.80 2.57
332 333 1.673920 GAAACAACGGCAGAAGGTTGA 59.326 47.619 10.51 0.00 44.80 3.18
333 334 1.269051 GGAAACAACGGCAGAAGGTTG 60.269 52.381 2.63 2.63 46.77 3.77
334 335 1.029681 GGAAACAACGGCAGAAGGTT 58.970 50.000 0.00 0.00 0.00 3.50
335 336 0.106918 TGGAAACAACGGCAGAAGGT 60.107 50.000 0.00 0.00 37.44 3.50
336 337 2.714259 TGGAAACAACGGCAGAAGG 58.286 52.632 0.00 0.00 37.44 3.46
348 349 4.222124 TGAGCTAAAGGAGGATGGAAAC 57.778 45.455 0.00 0.00 0.00 2.78
349 350 5.195940 CAATGAGCTAAAGGAGGATGGAAA 58.804 41.667 0.00 0.00 0.00 3.13
350 351 4.228210 ACAATGAGCTAAAGGAGGATGGAA 59.772 41.667 0.00 0.00 0.00 3.53
351 352 3.782523 ACAATGAGCTAAAGGAGGATGGA 59.217 43.478 0.00 0.00 0.00 3.41
352 353 4.162040 ACAATGAGCTAAAGGAGGATGG 57.838 45.455 0.00 0.00 0.00 3.51
353 354 6.994496 TGATAACAATGAGCTAAAGGAGGATG 59.006 38.462 0.00 0.00 0.00 3.51
354 355 7.141758 TGATAACAATGAGCTAAAGGAGGAT 57.858 36.000 0.00 0.00 0.00 3.24
355 356 6.560003 TGATAACAATGAGCTAAAGGAGGA 57.440 37.500 0.00 0.00 0.00 3.71
356 357 6.238593 GCTTGATAACAATGAGCTAAAGGAGG 60.239 42.308 0.00 0.00 35.37 4.30
357 358 6.317140 TGCTTGATAACAATGAGCTAAAGGAG 59.683 38.462 0.00 0.00 35.37 3.69
358 359 6.094048 GTGCTTGATAACAATGAGCTAAAGGA 59.906 38.462 0.00 0.00 35.37 3.36
359 360 6.127925 TGTGCTTGATAACAATGAGCTAAAGG 60.128 38.462 0.00 0.00 35.37 3.11
360 361 6.845302 TGTGCTTGATAACAATGAGCTAAAG 58.155 36.000 0.00 0.00 35.37 1.85
361 362 6.816134 TGTGCTTGATAACAATGAGCTAAA 57.184 33.333 0.00 0.00 35.37 1.85
362 363 6.816134 TTGTGCTTGATAACAATGAGCTAA 57.184 33.333 0.00 0.00 35.37 3.09
363 364 6.816134 TTTGTGCTTGATAACAATGAGCTA 57.184 33.333 0.00 0.00 36.26 3.32
364 365 5.710513 TTTGTGCTTGATAACAATGAGCT 57.289 34.783 0.00 0.00 36.26 4.09
365 366 6.327934 AGATTTGTGCTTGATAACAATGAGC 58.672 36.000 0.00 0.00 36.26 4.26
366 367 8.644619 CAAAGATTTGTGCTTGATAACAATGAG 58.355 33.333 0.00 0.00 36.26 2.90
367 368 7.116662 GCAAAGATTTGTGCTTGATAACAATGA 59.883 33.333 7.12 0.00 40.24 2.57
368 369 7.231607 GCAAAGATTTGTGCTTGATAACAATG 58.768 34.615 7.12 0.00 40.24 2.82
369 370 6.369615 GGCAAAGATTTGTGCTTGATAACAAT 59.630 34.615 7.12 0.00 40.70 2.71
370 371 5.695816 GGCAAAGATTTGTGCTTGATAACAA 59.304 36.000 7.12 0.00 40.70 2.83
371 372 5.229423 GGCAAAGATTTGTGCTTGATAACA 58.771 37.500 7.12 0.00 40.70 2.41
372 373 4.324402 CGGCAAAGATTTGTGCTTGATAAC 59.676 41.667 7.12 0.00 40.70 1.89
373 374 4.217334 TCGGCAAAGATTTGTGCTTGATAA 59.783 37.500 7.12 0.00 40.70 1.75
374 375 3.755905 TCGGCAAAGATTTGTGCTTGATA 59.244 39.130 7.12 0.00 40.70 2.15
375 376 2.557924 TCGGCAAAGATTTGTGCTTGAT 59.442 40.909 7.12 0.00 40.70 2.57
376 377 1.952990 TCGGCAAAGATTTGTGCTTGA 59.047 42.857 7.12 0.00 40.70 3.02
377 378 2.322161 CTCGGCAAAGATTTGTGCTTG 58.678 47.619 7.12 0.00 40.70 4.01
378 379 1.336240 GCTCGGCAAAGATTTGTGCTT 60.336 47.619 7.12 0.00 40.70 3.91
379 380 0.242017 GCTCGGCAAAGATTTGTGCT 59.758 50.000 7.12 0.00 40.70 4.40
380 381 1.067199 CGCTCGGCAAAGATTTGTGC 61.067 55.000 7.12 0.00 40.24 4.57
381 382 1.067199 GCGCTCGGCAAAGATTTGTG 61.067 55.000 0.00 1.24 42.87 3.33
382 383 1.210155 GCGCTCGGCAAAGATTTGT 59.790 52.632 0.00 0.00 42.87 2.83
383 384 1.514873 GGCGCTCGGCAAAGATTTG 60.515 57.895 7.64 0.84 46.16 2.32
384 385 2.700773 GGGCGCTCGGCAAAGATTT 61.701 57.895 17.26 0.00 46.16 2.17
385 386 3.134127 GGGCGCTCGGCAAAGATT 61.134 61.111 17.26 0.00 46.16 2.40
390 391 3.630298 TATTTGGGGCGCTCGGCAA 62.630 57.895 17.26 0.00 46.16 4.52
391 392 3.630298 TTATTTGGGGCGCTCGGCA 62.630 57.895 17.26 0.00 46.16 5.69
392 393 2.411504 TTTATTTGGGGCGCTCGGC 61.412 57.895 7.64 7.33 42.51 5.54
393 394 1.309499 TGTTTATTTGGGGCGCTCGG 61.309 55.000 7.64 0.00 0.00 4.63
394 395 0.179174 GTGTTTATTTGGGGCGCTCG 60.179 55.000 7.64 0.00 0.00 5.03
395 396 1.173913 AGTGTTTATTTGGGGCGCTC 58.826 50.000 7.64 1.18 0.00 5.03
396 397 1.272212 CAAGTGTTTATTTGGGGCGCT 59.728 47.619 7.64 0.00 0.00 5.92
397 398 1.671556 CCAAGTGTTTATTTGGGGCGC 60.672 52.381 0.00 0.00 39.34 6.53
398 399 1.671556 GCCAAGTGTTTATTTGGGGCG 60.672 52.381 5.51 0.00 42.28 6.13
399 400 1.346068 TGCCAAGTGTTTATTTGGGGC 59.654 47.619 5.51 0.00 42.28 5.80
400 401 3.760580 TTGCCAAGTGTTTATTTGGGG 57.239 42.857 5.51 0.00 42.28 4.96
401 402 4.514816 CCTTTTGCCAAGTGTTTATTTGGG 59.485 41.667 5.51 0.00 42.28 4.12
402 403 4.514816 CCCTTTTGCCAAGTGTTTATTTGG 59.485 41.667 0.00 0.00 44.19 3.28
403 404 4.514816 CCCCTTTTGCCAAGTGTTTATTTG 59.485 41.667 0.00 0.00 0.00 2.32
404 405 4.445592 CCCCCTTTTGCCAAGTGTTTATTT 60.446 41.667 0.00 0.00 0.00 1.40
405 406 3.072330 CCCCCTTTTGCCAAGTGTTTATT 59.928 43.478 0.00 0.00 0.00 1.40
406 407 2.637382 CCCCCTTTTGCCAAGTGTTTAT 59.363 45.455 0.00 0.00 0.00 1.40
407 408 2.043227 CCCCCTTTTGCCAAGTGTTTA 58.957 47.619 0.00 0.00 0.00 2.01
408 409 0.836606 CCCCCTTTTGCCAAGTGTTT 59.163 50.000 0.00 0.00 0.00 2.83
409 410 1.695114 GCCCCCTTTTGCCAAGTGTT 61.695 55.000 0.00 0.00 0.00 3.32
410 411 2.140138 GCCCCCTTTTGCCAAGTGT 61.140 57.895 0.00 0.00 0.00 3.55
411 412 1.694133 TTGCCCCCTTTTGCCAAGTG 61.694 55.000 0.00 0.00 0.00 3.16
412 413 0.767833 ATTGCCCCCTTTTGCCAAGT 60.768 50.000 0.00 0.00 0.00 3.16
413 414 0.036105 GATTGCCCCCTTTTGCCAAG 60.036 55.000 0.00 0.00 0.00 3.61
414 415 1.487850 GGATTGCCCCCTTTTGCCAA 61.488 55.000 0.00 0.00 0.00 4.52
415 416 1.917787 GGATTGCCCCCTTTTGCCA 60.918 57.895 0.00 0.00 0.00 4.92
416 417 1.487850 TTGGATTGCCCCCTTTTGCC 61.488 55.000 0.00 0.00 0.00 4.52
417 418 0.036105 CTTGGATTGCCCCCTTTTGC 60.036 55.000 0.00 0.00 0.00 3.68
418 419 1.002315 CACTTGGATTGCCCCCTTTTG 59.998 52.381 0.00 0.00 0.00 2.44
419 420 1.351076 CACTTGGATTGCCCCCTTTT 58.649 50.000 0.00 0.00 0.00 2.27
451 452 4.734398 AAATGGTTTTCTGAGTGTTGCA 57.266 36.364 0.00 0.00 0.00 4.08
503 504 2.361357 ACTCGCCGAGTGCTAGGT 60.361 61.111 20.56 0.00 41.76 3.08
573 574 5.752955 GGCATGTACAACTTCATTTGTGTTT 59.247 36.000 0.00 0.00 40.04 2.83
578 579 4.517952 TGGGCATGTACAACTTCATTTG 57.482 40.909 0.00 0.00 0.00 2.32
583 584 4.782019 TCAATTGGGCATGTACAACTTC 57.218 40.909 5.42 0.00 0.00 3.01
658 659 1.341369 TACACGCACGCTGATCAACG 61.341 55.000 16.58 16.58 0.00 4.10
699 700 7.779046 ACATAGATATGTTCGTCGATCGAGCT 61.779 42.308 20.09 5.06 46.92 4.09
744 746 2.439701 CTGGCCAGCAGTCATGGG 60.440 66.667 22.33 0.00 38.33 4.00
760 762 2.047274 CATGTCGGTGGTTCGGCT 60.047 61.111 0.00 0.00 35.57 5.52
780 782 1.960763 GTGCTGCGTGGTGTCATCA 60.961 57.895 0.00 0.00 0.00 3.07
823 837 2.034053 GCTAGCTGCTCGATTACTCTGT 59.966 50.000 4.91 0.00 38.95 3.41
866 914 1.872952 CCACGCATCTCAACTTGTGAA 59.127 47.619 0.00 0.00 35.22 3.18
868 916 0.110056 GCCACGCATCTCAACTTGTG 60.110 55.000 0.00 0.00 0.00 3.33
888 936 1.456518 ATCTGGCTGGAGCGAGCTA 60.457 57.895 5.82 0.00 44.92 3.32
988 1045 6.769822 CCTCTCATAGCCATGTTTAATTCTGT 59.230 38.462 0.00 0.00 33.57 3.41
989 1046 6.293845 GCCTCTCATAGCCATGTTTAATTCTG 60.294 42.308 0.00 0.00 33.57 3.02
996 1057 3.019564 GTTGCCTCTCATAGCCATGTTT 58.980 45.455 0.00 0.00 33.57 2.83
1030 1091 4.330894 CACAACTACGAGCATCATCACAAT 59.669 41.667 0.00 0.00 33.17 2.71
1106 1167 3.253677 GGTATCGACCGAGTTGAGATCAT 59.746 47.826 0.00 0.00 35.52 2.45
1145 1206 6.104665 TCTGAGACAGTGCTATCAGATTTTG 58.895 40.000 15.04 0.00 42.36 2.44
1161 1222 2.203082 ACCGCAGCACTCTGAGACA 61.203 57.895 12.44 0.00 41.83 3.41
1181 1242 5.724328 CTTCTGATATATAGCCAGCGGAAA 58.276 41.667 9.07 1.02 0.00 3.13
1203 1264 0.966875 TGCATTCAAATCCAGCGGCT 60.967 50.000 0.00 0.00 0.00 5.52
1248 1309 2.268762 TTGACATACCTTGCAGTGCA 57.731 45.000 15.37 15.37 36.47 4.57
1265 1326 5.151389 CGAAAAGAAAGGGTCGGTTATTTG 58.849 41.667 0.00 0.00 0.00 2.32
1270 1331 2.216046 GACGAAAAGAAAGGGTCGGTT 58.784 47.619 0.00 0.00 37.81 4.44
1281 1342 5.232463 AGCAATAAACGTAGGACGAAAAGA 58.768 37.500 5.94 0.00 46.05 2.52
1282 1343 5.526010 AGCAATAAACGTAGGACGAAAAG 57.474 39.130 5.94 0.00 46.05 2.27
1286 1347 2.669434 GCAAGCAATAAACGTAGGACGA 59.331 45.455 5.94 0.00 46.05 4.20
1287 1348 5.185161 GTTGCAAGCAATAAACGTAGGACG 61.185 45.833 11.00 0.00 41.90 4.79
1288 1349 4.083484 AGTTGCAAGCAATAAACGTAGGAC 60.083 41.667 11.00 0.00 38.28 3.85
1289 1350 4.069304 AGTTGCAAGCAATAAACGTAGGA 58.931 39.130 11.00 0.00 38.28 2.94
1290 1351 4.403453 GAGTTGCAAGCAATAAACGTAGG 58.597 43.478 11.00 0.00 38.28 3.18
1291 1352 4.403453 GGAGTTGCAAGCAATAAACGTAG 58.597 43.478 11.00 0.00 38.28 3.51
1292 1353 3.120477 CGGAGTTGCAAGCAATAAACGTA 60.120 43.478 11.00 0.00 38.28 3.57
1293 1354 2.350388 CGGAGTTGCAAGCAATAAACGT 60.350 45.455 11.00 0.00 38.28 3.99
1294 1355 2.241722 CGGAGTTGCAAGCAATAAACG 58.758 47.619 11.00 9.61 38.28 3.60
1295 1356 2.979813 CACGGAGTTGCAAGCAATAAAC 59.020 45.455 11.00 0.00 41.61 2.01
1382 1636 9.248291 AGCAAGCAAAAATTAAACATATATCGG 57.752 29.630 0.00 0.00 0.00 4.18
1391 1645 8.681138 GCAAATGTAAGCAAGCAAAAATTAAAC 58.319 29.630 0.00 0.00 0.00 2.01
1416 1670 1.133253 CCGCAGCGTATATGCATGC 59.867 57.895 18.91 20.55 44.05 4.06
1447 1701 0.320771 AGTAGTTGGTGGCTGCTTCG 60.321 55.000 0.00 0.00 0.00 3.79
1451 1705 3.267974 GCAGTAGTTGGTGGCTGC 58.732 61.111 0.00 0.00 45.70 5.25
1457 1711 2.108250 ACCCAATCTTGCAGTAGTTGGT 59.892 45.455 16.15 6.40 38.07 3.67
1458 1712 2.489329 CACCCAATCTTGCAGTAGTTGG 59.511 50.000 12.58 12.58 39.16 3.77
1472 1726 2.676471 GGAAGCCGTGCACCCAAT 60.676 61.111 12.15 0.00 0.00 3.16
1474 1728 3.884774 AAGGAAGCCGTGCACCCA 61.885 61.111 12.15 0.00 0.00 4.51
1520 1774 6.127026 GGGTTGGTGTTAGTGATAGAGAGAAT 60.127 42.308 0.00 0.00 0.00 2.40
1526 1780 3.522759 TGGGGTTGGTGTTAGTGATAGA 58.477 45.455 0.00 0.00 0.00 1.98
1527 1781 3.992943 TGGGGTTGGTGTTAGTGATAG 57.007 47.619 0.00 0.00 0.00 2.08
1564 1839 4.016444 TGCCTAAGGAAATTTGTAGCAGG 58.984 43.478 0.00 0.00 0.00 4.85
1590 1865 7.095313 TGCATTTTGTTTGTATATTGCAAGGTG 60.095 33.333 4.94 0.00 36.06 4.00
1594 1869 7.094933 TGCATGCATTTTGTTTGTATATTGCAA 60.095 29.630 18.46 0.00 41.58 4.08
1626 1906 2.575279 ACTACTACGAGACTTCTGGGGA 59.425 50.000 0.00 0.00 0.00 4.81
1655 1938 4.700213 GCAAGCAAGGAGTTATTTAGGTGA 59.300 41.667 0.00 0.00 0.00 4.02
1662 1945 5.887598 TGATACATGCAAGCAAGGAGTTATT 59.112 36.000 0.00 0.00 0.00 1.40
1670 1953 5.762825 ATTAGGTGATACATGCAAGCAAG 57.237 39.130 0.00 0.00 0.00 4.01
1711 2168 0.324645 ATGGCGCCTTTCCCTTCATT 60.325 50.000 29.70 0.00 0.00 2.57
1715 2172 2.362889 CCATGGCGCCTTTCCCTT 60.363 61.111 29.70 0.26 0.00 3.95
1724 2181 3.364441 TGCAGTGTTCCATGGCGC 61.364 61.111 6.96 0.00 0.00 6.53
1725 2182 2.562912 GTGCAGTGTTCCATGGCG 59.437 61.111 6.96 0.00 0.00 5.69
1736 2193 2.034687 GGCATCCACTGGTGCAGT 59.965 61.111 18.55 0.00 46.51 4.40
1776 2233 0.040514 TGACTTGTGCAATTTCCGCG 60.041 50.000 0.00 0.00 0.00 6.46
1779 2236 3.236816 CGTGATGACTTGTGCAATTTCC 58.763 45.455 0.00 0.00 0.00 3.13
1788 2245 3.402628 AGTTAAGCCGTGATGACTTGT 57.597 42.857 0.00 0.00 0.00 3.16
1795 2252 4.377897 GGCATAACTAGTTAAGCCGTGAT 58.622 43.478 34.00 10.92 45.84 3.06
1820 2277 1.375098 GGCTTGTCAGATGCAGCTCC 61.375 60.000 0.00 0.00 0.00 4.70
1921 2380 5.574891 ATGATCGAGCACTATACATCCTC 57.425 43.478 5.03 0.00 0.00 3.71
1959 2418 9.932207 CCATATGCCAATGATACAACATAATTT 57.068 29.630 0.00 0.00 0.00 1.82
1960 2419 8.036575 GCCATATGCCAATGATACAACATAATT 58.963 33.333 0.00 0.00 0.00 1.40
1961 2420 7.178805 TGCCATATGCCAATGATACAACATAAT 59.821 33.333 0.00 0.00 40.16 1.28
1974 2433 2.490509 CGTCATCATGCCATATGCCAAT 59.509 45.455 0.00 0.00 40.16 3.16
2025 2485 8.026607 CCAGAACGAAACACCATAATAATTTGT 58.973 33.333 0.00 0.00 0.00 2.83
2041 2501 1.003839 ATGCCTCGCCAGAACGAAA 60.004 52.632 0.00 0.00 42.39 3.46
2044 2504 1.448540 AAGATGCCTCGCCAGAACG 60.449 57.895 0.00 0.00 0.00 3.95
2050 2510 1.168714 AGAAAACAAGATGCCTCGCC 58.831 50.000 0.00 0.00 0.00 5.54
2056 2516 6.256321 TCAAAAGCAAGAAGAAAACAAGATGC 59.744 34.615 0.00 0.00 0.00 3.91
2068 2530 5.163612 GCTTACCCCTATCAAAAGCAAGAAG 60.164 44.000 0.00 0.00 41.65 2.85
2074 2536 4.402474 ACATTGCTTACCCCTATCAAAAGC 59.598 41.667 0.00 0.00 42.22 3.51
2080 2542 3.470645 ACGACATTGCTTACCCCTATC 57.529 47.619 0.00 0.00 0.00 2.08
2098 2560 0.738389 AAGACACCTTGCCAACAACG 59.262 50.000 0.00 0.00 0.00 4.10
2101 2563 2.426738 CTCAAAAGACACCTTGCCAACA 59.573 45.455 0.00 0.00 31.91 3.33
2112 2574 6.707440 TGCTTTGATTAACCTCAAAAGACA 57.293 33.333 5.89 3.07 42.78 3.41
2139 2601 2.812011 GGCTGAAACACTAATTGACCGT 59.188 45.455 0.00 0.00 0.00 4.83
2166 2628 7.303634 ACGTATCAAGTTTATGGACACATTC 57.696 36.000 0.00 0.00 38.53 2.67
2167 2629 7.009815 CGTACGTATCAAGTTTATGGACACATT 59.990 37.037 7.22 0.00 38.53 2.71
2174 2636 5.747197 AGCTTCGTACGTATCAAGTTTATGG 59.253 40.000 16.05 0.00 0.00 2.74
2175 2637 6.807708 AGCTTCGTACGTATCAAGTTTATG 57.192 37.500 16.05 0.00 0.00 1.90
2176 2638 7.823149 AAAGCTTCGTACGTATCAAGTTTAT 57.177 32.000 16.05 4.59 0.00 1.40
2177 2639 7.359431 CCAAAAGCTTCGTACGTATCAAGTTTA 60.359 37.037 16.05 0.00 0.00 2.01
2179 2641 5.107220 CCAAAAGCTTCGTACGTATCAAGTT 60.107 40.000 16.05 6.56 0.00 2.66
2180 2642 4.387862 CCAAAAGCTTCGTACGTATCAAGT 59.612 41.667 16.05 0.27 0.00 3.16
2181 2643 4.724036 GCCAAAAGCTTCGTACGTATCAAG 60.724 45.833 16.05 12.23 38.99 3.02
2182 2644 3.123959 GCCAAAAGCTTCGTACGTATCAA 59.876 43.478 16.05 0.72 38.99 2.57
2183 2645 2.669434 GCCAAAAGCTTCGTACGTATCA 59.331 45.455 16.05 0.00 38.99 2.15
2203 3330 5.739161 CACAAAGTTTACTGTGAAGTTGAGC 59.261 40.000 7.05 0.00 44.68 4.26
2227 3355 3.502979 ACTGTTAGAGTGGACGAGAGTTC 59.497 47.826 0.00 0.00 37.90 3.01
2242 3370 1.448540 CCAGCTCCGCCACTGTTAG 60.449 63.158 0.00 0.00 31.76 2.34
2243 3371 2.662596 CCAGCTCCGCCACTGTTA 59.337 61.111 0.00 0.00 31.76 2.41
2252 3380 2.100631 CGGTAAAGTGCCAGCTCCG 61.101 63.158 0.00 0.00 0.00 4.63
2256 3384 0.955919 AGCTTCGGTAAAGTGCCAGC 60.956 55.000 0.00 0.00 37.31 4.85
2259 3387 0.521735 CCAAGCTTCGGTAAAGTGCC 59.478 55.000 0.00 0.00 37.31 5.01
2268 3396 3.423154 GACGTGCCCAAGCTTCGG 61.423 66.667 5.63 5.63 39.79 4.30
2276 3404 1.965930 GAAGCATGTGACGTGCCCA 60.966 57.895 24.74 0.00 43.50 5.36
2332 3460 8.662781 TGTAGGATCTATGAAAACATTACTGC 57.337 34.615 0.00 0.00 0.00 4.40
2356 3484 8.906693 GTTGTCATATCTCGTGTTATGTAGATG 58.093 37.037 12.75 0.00 31.38 2.90
2359 3487 8.628882 TTGTTGTCATATCTCGTGTTATGTAG 57.371 34.615 12.75 0.00 31.33 2.74
2364 3492 9.647797 ACTTATTTGTTGTCATATCTCGTGTTA 57.352 29.630 0.00 0.00 0.00 2.41
2398 3526 8.877779 AGACGAGATTTTCAGAATTTCACATAG 58.122 33.333 0.00 0.00 0.00 2.23
2410 3538 5.523013 GTCTCCAAAGACGAGATTTTCAG 57.477 43.478 0.00 0.00 42.42 3.02
2458 3586 9.268268 CACTTCAAAAGTTTGGTAGTATCAGTA 57.732 33.333 2.26 0.00 40.46 2.74
2459 3587 7.773690 ACACTTCAAAAGTTTGGTAGTATCAGT 59.226 33.333 2.26 0.00 40.46 3.41
2460 3588 8.154649 ACACTTCAAAAGTTTGGTAGTATCAG 57.845 34.615 2.26 0.00 40.46 2.90
2461 3589 8.402472 CAACACTTCAAAAGTTTGGTAGTATCA 58.598 33.333 2.26 0.00 40.46 2.15
2479 3607 6.879188 TCGAAATTTGGTTTTCAACACTTC 57.121 33.333 0.00 0.00 35.73 3.01
2481 3609 6.816140 ACAATCGAAATTTGGTTTTCAACACT 59.184 30.769 0.00 0.00 35.73 3.55
2482 3610 6.999456 ACAATCGAAATTTGGTTTTCAACAC 58.001 32.000 0.00 0.00 35.73 3.32
2483 3611 8.191446 TCTACAATCGAAATTTGGTTTTCAACA 58.809 29.630 0.00 0.00 35.73 3.33
2484 3612 8.568732 TCTACAATCGAAATTTGGTTTTCAAC 57.431 30.769 0.00 0.00 35.73 3.18
2485 3613 9.757227 ATTCTACAATCGAAATTTGGTTTTCAA 57.243 25.926 0.00 0.00 35.73 2.69
2486 3614 9.757227 AATTCTACAATCGAAATTTGGTTTTCA 57.243 25.926 0.00 0.00 35.73 2.69
2552 3680 8.627403 AGATGTGCTTATATTTGTTTCATCAGG 58.373 33.333 0.00 0.00 33.83 3.86
2700 3832 7.552330 TGCTGAGCAGTTTATTTACACATGATA 59.448 33.333 1.40 0.00 33.32 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.