Multiple sequence alignment - TraesCS1B01G017100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G017100 chr1B 100.000 3953 0 0 1 3953 8221272 8225224 0.000000e+00 7300.0
1 TraesCS1B01G017100 chr1B 97.633 1394 19 3 2573 3953 8234815 8233423 0.000000e+00 2379.0
2 TraesCS1B01G017100 chr1B 94.996 1139 30 13 695 1812 17812806 17811674 0.000000e+00 1762.0
3 TraesCS1B01G017100 chr1B 99.141 815 4 2 1813 2627 8235536 8234725 0.000000e+00 1463.0
4 TraesCS1B01G017100 chr1B 81.313 594 60 25 695 1250 8173407 8172827 6.070000e-118 435.0
5 TraesCS1B01G017100 chr1B 93.220 236 11 2 467 699 8174035 8173802 3.780000e-90 342.0
6 TraesCS1B01G017100 chr1B 94.907 216 5 3 484 696 17813407 17813195 2.280000e-87 333.0
7 TraesCS1B01G017100 chr1B 88.968 281 14 3 1548 1812 8171132 8170853 8.190000e-87 331.0
8 TraesCS1B01G017100 chr1B 85.172 290 33 8 895 1175 8156407 8156119 5.000000e-74 289.0
9 TraesCS1B01G017100 chr1B 89.855 138 14 0 1307 1444 8171279 8171142 1.130000e-40 178.0
10 TraesCS1B01G017100 chr1B 88.550 131 13 1 2573 2701 8223806 8223936 1.470000e-34 158.0
11 TraesCS1B01G017100 chr1B 88.550 131 13 1 2535 2665 8223844 8223972 1.470000e-34 158.0
12 TraesCS1B01G017100 chr1B 96.739 92 3 0 3143 3234 8234366 8234275 1.900000e-33 154.0
13 TraesCS1B01G017100 chr1B 100.000 58 0 0 3177 3234 8224316 8224373 1.500000e-19 108.0
14 TraesCS1B01G017100 chr1B 100.000 58 0 0 3045 3102 8224448 8224505 1.500000e-19 108.0
15 TraesCS1B01G017100 chr1B 98.276 58 1 0 3045 3102 8234200 8234143 6.990000e-18 102.0
16 TraesCS1B01G017100 chr1B 82.727 110 17 1 2609 2716 8223806 8223915 3.250000e-16 97.1
17 TraesCS1B01G017100 chr1B 82.727 110 17 1 2535 2644 8223880 8223987 3.250000e-16 97.1
18 TraesCS1B01G017100 chr1B 98.182 55 1 0 2609 2663 8234815 8234761 3.250000e-16 97.1
19 TraesCS1B01G017100 chr1B 89.231 65 5 2 1235 1299 8171385 8171323 3.270000e-11 80.5
20 TraesCS1B01G017100 chr1B 91.489 47 1 2 2873 2919 8234278 8234235 1.190000e-05 62.1
21 TraesCS1B01G017100 chr1B 91.304 46 1 2 3099 3141 8224144 8224189 4.270000e-05 60.2
22 TraesCS1B01G017100 chr1B 91.304 46 1 2 2873 2918 8224370 8224412 4.270000e-05 60.2
23 TraesCS1B01G017100 chr1B 91.304 46 1 2 3099 3141 8234515 8234470 4.270000e-05 60.2
24 TraesCS1B01G017100 chr1A 94.815 1138 32 10 695 1812 6571895 6570765 0.000000e+00 1749.0
25 TraesCS1B01G017100 chr1A 94.792 192 10 0 508 699 6572484 6572293 2.310000e-77 300.0
26 TraesCS1B01G017100 chr1D 81.802 1143 127 50 695 1779 5407229 5406110 0.000000e+00 883.0
27 TraesCS1B01G017100 chr1D 90.763 249 12 4 462 699 5407872 5407624 4.930000e-84 322.0
28 TraesCS1B01G017100 chr1D 84.669 287 34 8 895 1172 5353380 5353095 1.080000e-70 278.0
29 TraesCS1B01G017100 chr7B 88.235 323 32 4 3284 3604 682300775 682301093 8.020000e-102 381.0
30 TraesCS1B01G017100 chr7B 80.759 369 49 5 2196 2546 682299868 682300232 6.510000e-68 268.0
31 TraesCS1B01G017100 chr7B 75.439 399 67 22 74 463 261048543 261048167 8.790000e-37 165.0
32 TraesCS1B01G017100 chr4A 75.501 898 115 45 1813 2668 699545486 699544652 3.780000e-90 342.0
33 TraesCS1B01G017100 chr4A 75.390 898 116 42 1813 2668 699394070 699393236 1.760000e-88 337.0
34 TraesCS1B01G017100 chr4A 75.390 898 116 43 1813 2668 699455168 699454334 1.760000e-88 337.0
35 TraesCS1B01G017100 chr4A 95.000 40 1 1 2938 2976 699393164 699393125 1.190000e-05 62.1
36 TraesCS1B01G017100 chr4A 95.000 40 1 1 2938 2976 699454262 699454223 1.190000e-05 62.1
37 TraesCS1B01G017100 chr4A 95.000 40 1 1 2938 2976 699497790 699497751 1.190000e-05 62.1
38 TraesCS1B01G017100 chr4A 95.000 40 1 1 2938 2976 699544580 699544541 1.190000e-05 62.1
39 TraesCS1B01G017100 chr7A 76.368 402 73 15 74 462 53263845 53264237 3.120000e-46 196.0
40 TraesCS1B01G017100 chr5B 76.119 402 74 15 74 462 259550342 259550734 1.450000e-44 191.0
41 TraesCS1B01G017100 chr4B 77.477 333 57 13 138 463 95681303 95681624 2.430000e-42 183.0
42 TraesCS1B01G017100 chr4B 74.937 399 73 18 74 462 18971021 18971402 1.470000e-34 158.0
43 TraesCS1B01G017100 chrUn 75.312 401 71 21 74 462 52409026 52408642 2.440000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G017100 chr1B 8221272 8225224 3952 False 905.177778 7300 91.684667 1 3953 9 chr1B.!!$F1 3952
1 TraesCS1B01G017100 chr1B 17811674 17813407 1733 True 1047.500000 1762 94.951500 484 1812 2 chr1B.!!$R4 1328
2 TraesCS1B01G017100 chr1B 8233423 8235536 2113 True 616.771429 2379 96.109143 1813 3953 7 chr1B.!!$R3 2140
3 TraesCS1B01G017100 chr1B 8170853 8174035 3182 True 273.300000 435 88.517400 467 1812 5 chr1B.!!$R2 1345
4 TraesCS1B01G017100 chr1A 6570765 6572484 1719 True 1024.500000 1749 94.803500 508 1812 2 chr1A.!!$R1 1304
5 TraesCS1B01G017100 chr1D 5406110 5407872 1762 True 602.500000 883 86.282500 462 1779 2 chr1D.!!$R2 1317
6 TraesCS1B01G017100 chr7B 682299868 682301093 1225 False 324.500000 381 84.497000 2196 3604 2 chr7B.!!$F1 1408
7 TraesCS1B01G017100 chr4A 699544541 699545486 945 True 202.050000 342 85.250500 1813 2976 2 chr4A.!!$R4 1163

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 435 0.032130 TATCAGAACGGCAGATCGGC 59.968 55.000 9.58 9.58 0.00 5.54 F
464 465 0.034337 GTGTCCGTGCTTTGTAGGGA 59.966 55.000 0.00 0.00 30.48 4.20 F
1145 1606 3.565902 AGTTTCAGCAAGTTTACTGGAGC 59.434 43.478 3.44 0.00 34.57 4.70 F
2544 4651 0.038166 TTGGGGGATTGTGTGCTCTC 59.962 55.000 0.00 0.00 0.00 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1909 3918 1.004394 AGAATCAGACCGGGAAAACCC 59.996 52.381 6.32 0.0 34.99 4.11 R
2498 4524 7.112122 TCATCATTAGCAGATACACCAGTTTT 58.888 34.615 0.00 0.0 0.00 2.43 R
2547 4654 0.987294 ACCCTGTGATCTTGACCTGG 59.013 55.000 0.00 0.0 0.00 4.45 R
3802 6081 3.181514 CCTTGGTTGCCGTTTCTATTACG 60.182 47.826 0.00 0.0 38.67 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.672673 TCAGAAGAATAAAATAGGAAGAGGTTG 57.327 33.333 0.00 0.00 0.00 3.77
30 31 9.672673 CAGAAGAATAAAATAGGAAGAGGTTGA 57.327 33.333 0.00 0.00 0.00 3.18
31 32 9.898152 AGAAGAATAAAATAGGAAGAGGTTGAG 57.102 33.333 0.00 0.00 0.00 3.02
32 33 9.114952 GAAGAATAAAATAGGAAGAGGTTGAGG 57.885 37.037 0.00 0.00 0.00 3.86
33 34 8.393959 AGAATAAAATAGGAAGAGGTTGAGGA 57.606 34.615 0.00 0.00 0.00 3.71
34 35 8.836735 AGAATAAAATAGGAAGAGGTTGAGGAA 58.163 33.333 0.00 0.00 0.00 3.36
35 36 9.634021 GAATAAAATAGGAAGAGGTTGAGGAAT 57.366 33.333 0.00 0.00 0.00 3.01
36 37 8.986929 ATAAAATAGGAAGAGGTTGAGGAATG 57.013 34.615 0.00 0.00 0.00 2.67
37 38 6.642733 AAATAGGAAGAGGTTGAGGAATGA 57.357 37.500 0.00 0.00 0.00 2.57
38 39 5.885449 ATAGGAAGAGGTTGAGGAATGAG 57.115 43.478 0.00 0.00 0.00 2.90
39 40 3.796111 AGGAAGAGGTTGAGGAATGAGA 58.204 45.455 0.00 0.00 0.00 3.27
40 41 3.774216 AGGAAGAGGTTGAGGAATGAGAG 59.226 47.826 0.00 0.00 0.00 3.20
41 42 3.118445 GGAAGAGGTTGAGGAATGAGAGG 60.118 52.174 0.00 0.00 0.00 3.69
42 43 1.836802 AGAGGTTGAGGAATGAGAGGC 59.163 52.381 0.00 0.00 0.00 4.70
43 44 1.836802 GAGGTTGAGGAATGAGAGGCT 59.163 52.381 0.00 0.00 0.00 4.58
44 45 1.558756 AGGTTGAGGAATGAGAGGCTG 59.441 52.381 0.00 0.00 0.00 4.85
45 46 1.280421 GGTTGAGGAATGAGAGGCTGT 59.720 52.381 0.00 0.00 0.00 4.40
46 47 2.626840 GTTGAGGAATGAGAGGCTGTC 58.373 52.381 4.41 4.41 0.00 3.51
47 48 0.820226 TGAGGAATGAGAGGCTGTCG 59.180 55.000 7.20 0.00 0.00 4.35
48 49 0.103937 GAGGAATGAGAGGCTGTCGG 59.896 60.000 7.20 0.00 0.00 4.79
49 50 1.144936 GGAATGAGAGGCTGTCGGG 59.855 63.158 7.20 0.00 0.00 5.14
50 51 1.617947 GGAATGAGAGGCTGTCGGGT 61.618 60.000 7.20 0.00 0.00 5.28
51 52 0.250513 GAATGAGAGGCTGTCGGGTT 59.749 55.000 7.20 2.09 0.00 4.11
52 53 1.480954 GAATGAGAGGCTGTCGGGTTA 59.519 52.381 7.20 0.00 0.00 2.85
53 54 0.824759 ATGAGAGGCTGTCGGGTTAC 59.175 55.000 7.20 0.00 0.00 2.50
54 55 1.255667 TGAGAGGCTGTCGGGTTACC 61.256 60.000 7.20 0.00 0.00 2.85
55 56 0.971447 GAGAGGCTGTCGGGTTACCT 60.971 60.000 0.00 0.00 33.28 3.08
56 57 1.218316 GAGGCTGTCGGGTTACCTG 59.782 63.158 3.32 3.32 33.28 4.00
57 58 1.535687 AGGCTGTCGGGTTACCTGT 60.536 57.895 10.34 0.00 33.28 4.00
58 59 1.375523 GGCTGTCGGGTTACCTGTG 60.376 63.158 10.34 3.55 33.28 3.66
59 60 1.669440 GCTGTCGGGTTACCTGTGA 59.331 57.895 10.34 0.00 33.28 3.58
60 61 0.669625 GCTGTCGGGTTACCTGTGAC 60.670 60.000 10.34 11.65 33.28 3.67
61 62 0.966920 CTGTCGGGTTACCTGTGACT 59.033 55.000 10.34 0.00 33.28 3.41
62 63 0.677288 TGTCGGGTTACCTGTGACTG 59.323 55.000 10.34 0.00 33.28 3.51
63 64 0.669625 GTCGGGTTACCTGTGACTGC 60.670 60.000 10.34 0.00 33.28 4.40
64 65 1.736645 CGGGTTACCTGTGACTGCG 60.737 63.158 1.23 0.00 33.28 5.18
65 66 1.669440 GGGTTACCTGTGACTGCGA 59.331 57.895 0.00 0.00 0.00 5.10
66 67 0.389948 GGGTTACCTGTGACTGCGAG 60.390 60.000 0.00 0.00 0.00 5.03
67 68 0.389948 GGTTACCTGTGACTGCGAGG 60.390 60.000 0.00 0.00 0.00 4.63
68 69 0.601558 GTTACCTGTGACTGCGAGGA 59.398 55.000 0.00 0.00 0.00 3.71
69 70 0.888619 TTACCTGTGACTGCGAGGAG 59.111 55.000 0.00 0.00 0.00 3.69
70 71 0.037734 TACCTGTGACTGCGAGGAGA 59.962 55.000 0.00 0.00 0.00 3.71
71 72 1.247419 ACCTGTGACTGCGAGGAGAG 61.247 60.000 0.00 0.00 0.00 3.20
72 73 1.510383 CTGTGACTGCGAGGAGAGG 59.490 63.158 0.00 0.00 0.00 3.69
73 74 2.183046 GTGACTGCGAGGAGAGGC 59.817 66.667 0.00 0.00 0.00 4.70
74 75 2.036414 TGACTGCGAGGAGAGGCT 59.964 61.111 0.00 0.00 0.00 4.58
75 76 2.346541 TGACTGCGAGGAGAGGCTG 61.347 63.158 0.00 0.00 0.00 4.85
76 77 3.714871 GACTGCGAGGAGAGGCTGC 62.715 68.421 0.00 0.00 0.00 5.25
77 78 3.459965 CTGCGAGGAGAGGCTGCT 61.460 66.667 0.00 0.00 34.11 4.24
78 79 3.719883 CTGCGAGGAGAGGCTGCTG 62.720 68.421 0.00 0.00 30.82 4.41
79 80 4.527583 GCGAGGAGAGGCTGCTGG 62.528 72.222 0.00 0.00 30.82 4.85
80 81 3.073735 CGAGGAGAGGCTGCTGGT 61.074 66.667 0.00 0.00 30.82 4.00
81 82 2.899505 GAGGAGAGGCTGCTGGTC 59.100 66.667 0.00 0.00 30.82 4.02
82 83 1.685421 GAGGAGAGGCTGCTGGTCT 60.685 63.158 0.00 0.00 30.82 3.85
83 84 1.958902 GAGGAGAGGCTGCTGGTCTG 61.959 65.000 0.00 0.00 30.82 3.51
84 85 2.583520 GAGAGGCTGCTGGTCTGG 59.416 66.667 0.00 0.00 0.00 3.86
85 86 3.007920 AGAGGCTGCTGGTCTGGG 61.008 66.667 0.00 0.00 0.00 4.45
86 87 4.106925 GAGGCTGCTGGTCTGGGG 62.107 72.222 0.00 0.00 0.00 4.96
89 90 3.009115 GCTGCTGGTCTGGGGGTA 61.009 66.667 0.00 0.00 0.00 3.69
90 91 3.036429 GCTGCTGGTCTGGGGGTAG 62.036 68.421 0.00 0.00 0.00 3.18
91 92 1.613630 CTGCTGGTCTGGGGGTAGT 60.614 63.158 0.00 0.00 0.00 2.73
92 93 1.903877 CTGCTGGTCTGGGGGTAGTG 61.904 65.000 0.00 0.00 0.00 2.74
93 94 2.670148 GCTGGTCTGGGGGTAGTGG 61.670 68.421 0.00 0.00 0.00 4.00
94 95 1.229529 CTGGTCTGGGGGTAGTGGT 60.230 63.158 0.00 0.00 0.00 4.16
95 96 1.229400 TGGTCTGGGGGTAGTGGTC 60.229 63.158 0.00 0.00 0.00 4.02
96 97 2.356780 GGTCTGGGGGTAGTGGTCG 61.357 68.421 0.00 0.00 0.00 4.79
97 98 2.682494 TCTGGGGGTAGTGGTCGC 60.682 66.667 0.00 0.00 0.00 5.19
98 99 3.782443 CTGGGGGTAGTGGTCGCC 61.782 72.222 0.00 0.00 37.21 5.54
99 100 4.326227 TGGGGGTAGTGGTCGCCT 62.326 66.667 0.00 0.00 37.90 5.52
100 101 3.468140 GGGGGTAGTGGTCGCCTC 61.468 72.222 0.00 0.00 37.90 4.70
101 102 2.363925 GGGGTAGTGGTCGCCTCT 60.364 66.667 5.90 5.90 35.46 3.69
102 103 2.424733 GGGGTAGTGGTCGCCTCTC 61.425 68.421 4.15 0.00 35.46 3.20
103 104 2.424733 GGGTAGTGGTCGCCTCTCC 61.425 68.421 4.15 6.06 0.00 3.71
104 105 1.681327 GGTAGTGGTCGCCTCTCCA 60.681 63.158 4.15 0.00 0.00 3.86
105 106 1.668101 GGTAGTGGTCGCCTCTCCAG 61.668 65.000 4.15 0.00 34.16 3.86
106 107 0.966370 GTAGTGGTCGCCTCTCCAGT 60.966 60.000 4.15 0.00 40.11 4.00
107 108 0.680280 TAGTGGTCGCCTCTCCAGTC 60.680 60.000 4.15 0.00 38.24 3.51
108 109 2.680352 TGGTCGCCTCTCCAGTCC 60.680 66.667 0.00 0.00 0.00 3.85
109 110 2.680352 GGTCGCCTCTCCAGTCCA 60.680 66.667 0.00 0.00 0.00 4.02
110 111 2.716017 GGTCGCCTCTCCAGTCCAG 61.716 68.421 0.00 0.00 0.00 3.86
111 112 2.363018 TCGCCTCTCCAGTCCAGG 60.363 66.667 0.00 0.00 0.00 4.45
113 114 3.791586 GCCTCTCCAGTCCAGGCC 61.792 72.222 0.00 0.00 46.20 5.19
114 115 2.040278 CCTCTCCAGTCCAGGCCT 59.960 66.667 0.00 0.00 0.00 5.19
115 116 2.063378 CCTCTCCAGTCCAGGCCTC 61.063 68.421 0.00 0.00 0.00 4.70
116 117 2.363018 TCTCCAGTCCAGGCCTCG 60.363 66.667 0.00 0.00 0.00 4.63
117 118 4.154347 CTCCAGTCCAGGCCTCGC 62.154 72.222 0.00 0.00 0.00 5.03
147 148 4.680237 CGAGTTCAGGTGGCGGCA 62.680 66.667 7.97 7.97 0.00 5.69
148 149 2.045926 GAGTTCAGGTGGCGGCAT 60.046 61.111 17.19 0.00 0.00 4.40
149 150 2.045926 AGTTCAGGTGGCGGCATC 60.046 61.111 17.19 16.35 0.00 3.91
150 151 2.045926 GTTCAGGTGGCGGCATCT 60.046 61.111 20.61 20.61 0.00 2.90
151 152 2.109126 GTTCAGGTGGCGGCATCTC 61.109 63.158 23.64 7.80 0.00 2.75
152 153 3.664025 TTCAGGTGGCGGCATCTCG 62.664 63.158 23.64 17.33 0.00 4.04
153 154 4.147449 CAGGTGGCGGCATCTCGA 62.147 66.667 23.64 0.00 0.00 4.04
154 155 3.157252 AGGTGGCGGCATCTCGAT 61.157 61.111 20.61 0.00 0.00 3.59
155 156 2.663188 GGTGGCGGCATCTCGATC 60.663 66.667 17.19 0.00 0.00 3.69
156 157 2.663188 GTGGCGGCATCTCGATCC 60.663 66.667 17.19 0.00 0.00 3.36
157 158 3.153781 TGGCGGCATCTCGATCCA 61.154 61.111 7.97 0.00 0.00 3.41
158 159 2.356793 GGCGGCATCTCGATCCAG 60.357 66.667 3.07 0.00 0.00 3.86
159 160 2.356793 GCGGCATCTCGATCCAGG 60.357 66.667 0.00 0.00 0.00 4.45
160 161 2.861101 GCGGCATCTCGATCCAGGA 61.861 63.158 0.00 0.00 0.00 3.86
161 162 1.288439 CGGCATCTCGATCCAGGAG 59.712 63.158 0.00 0.00 0.00 3.69
162 163 1.670590 GGCATCTCGATCCAGGAGG 59.329 63.158 0.00 0.00 32.34 4.30
163 164 1.005156 GCATCTCGATCCAGGAGGC 60.005 63.158 0.00 0.00 33.74 4.70
164 165 1.288439 CATCTCGATCCAGGAGGCG 59.712 63.158 7.95 7.95 33.74 5.52
165 166 1.905843 ATCTCGATCCAGGAGGCGG 60.906 63.158 13.04 5.90 33.74 6.13
166 167 4.292178 CTCGATCCAGGAGGCGGC 62.292 72.222 13.04 0.00 33.74 6.53
182 183 4.374702 GCGGCGTGTTCAGTGCTG 62.375 66.667 9.37 0.00 38.04 4.41
183 184 4.374702 CGGCGTGTTCAGTGCTGC 62.375 66.667 0.00 0.00 0.00 5.25
184 185 4.030452 GGCGTGTTCAGTGCTGCC 62.030 66.667 0.00 0.00 35.04 4.85
185 186 2.974698 GCGTGTTCAGTGCTGCCT 60.975 61.111 0.00 0.00 0.00 4.75
186 187 2.941333 CGTGTTCAGTGCTGCCTG 59.059 61.111 10.65 10.65 0.00 4.85
187 188 2.610694 CGTGTTCAGTGCTGCCTGG 61.611 63.158 15.08 0.00 33.14 4.45
188 189 2.113774 TGTTCAGTGCTGCCTGGG 59.886 61.111 15.08 0.00 33.14 4.45
189 190 2.431683 GTTCAGTGCTGCCTGGGA 59.568 61.111 15.08 0.00 33.14 4.37
190 191 1.673665 GTTCAGTGCTGCCTGGGAG 60.674 63.158 11.32 11.32 33.14 4.30
191 192 2.898933 TTCAGTGCTGCCTGGGAGG 61.899 63.158 17.41 0.00 38.80 4.30
201 202 4.106925 CTGGGAGGCTGGGAGCAC 62.107 72.222 0.00 0.00 44.75 4.40
205 206 4.154347 GAGGCTGGGAGCACCTCG 62.154 72.222 0.00 0.00 44.75 4.63
207 208 4.459089 GGCTGGGAGCACCTCGTC 62.459 72.222 0.00 0.00 44.75 4.20
208 209 4.459089 GCTGGGAGCACCTCGTCC 62.459 72.222 0.00 0.00 41.89 4.79
209 210 2.681778 CTGGGAGCACCTCGTCCT 60.682 66.667 0.00 0.00 41.11 3.85
210 211 2.203788 TGGGAGCACCTCGTCCTT 60.204 61.111 0.00 0.00 41.11 3.36
211 212 2.232298 CTGGGAGCACCTCGTCCTTC 62.232 65.000 0.00 0.00 41.11 3.46
212 213 2.579738 GGAGCACCTCGTCCTTCC 59.420 66.667 0.00 0.00 0.00 3.46
213 214 2.182030 GAGCACCTCGTCCTTCCG 59.818 66.667 0.00 0.00 0.00 4.30
214 215 2.600769 AGCACCTCGTCCTTCCGT 60.601 61.111 0.00 0.00 0.00 4.69
215 216 2.432628 GCACCTCGTCCTTCCGTG 60.433 66.667 0.00 0.00 0.00 4.94
216 217 2.261671 CACCTCGTCCTTCCGTGG 59.738 66.667 0.00 0.00 44.72 4.94
217 218 2.116772 ACCTCGTCCTTCCGTGGA 59.883 61.111 8.46 0.00 42.52 4.02
218 219 1.977544 ACCTCGTCCTTCCGTGGAG 60.978 63.158 8.46 0.00 42.52 3.86
219 220 1.677966 CCTCGTCCTTCCGTGGAGA 60.678 63.158 0.00 0.00 42.52 3.71
220 221 1.658686 CCTCGTCCTTCCGTGGAGAG 61.659 65.000 0.00 0.00 42.52 3.20
221 222 0.961358 CTCGTCCTTCCGTGGAGAGT 60.961 60.000 0.00 0.00 36.69 3.24
222 223 1.213013 CGTCCTTCCGTGGAGAGTG 59.787 63.158 0.00 0.00 36.69 3.51
223 224 1.524863 CGTCCTTCCGTGGAGAGTGT 61.525 60.000 0.00 0.00 36.69 3.55
224 225 0.038159 GTCCTTCCGTGGAGAGTGTG 60.038 60.000 0.00 0.00 36.69 3.82
225 226 1.374758 CCTTCCGTGGAGAGTGTGC 60.375 63.158 0.00 0.00 0.00 4.57
226 227 1.734477 CTTCCGTGGAGAGTGTGCG 60.734 63.158 0.00 0.00 0.00 5.34
227 228 2.421877 CTTCCGTGGAGAGTGTGCGT 62.422 60.000 0.00 0.00 0.00 5.24
228 229 2.693250 TTCCGTGGAGAGTGTGCGTG 62.693 60.000 0.00 0.00 0.00 5.34
229 230 3.406361 CGTGGAGAGTGTGCGTGC 61.406 66.667 0.00 0.00 0.00 5.34
230 231 2.280119 GTGGAGAGTGTGCGTGCA 60.280 61.111 0.00 0.00 0.00 4.57
231 232 1.887242 GTGGAGAGTGTGCGTGCAA 60.887 57.895 0.00 0.00 0.00 4.08
232 233 1.887242 TGGAGAGTGTGCGTGCAAC 60.887 57.895 0.00 0.00 0.00 4.17
233 234 2.607892 GGAGAGTGTGCGTGCAACC 61.608 63.158 0.00 0.00 0.00 3.77
234 235 2.591715 AGAGTGTGCGTGCAACCC 60.592 61.111 0.00 0.00 0.00 4.11
235 236 4.012895 GAGTGTGCGTGCAACCCG 62.013 66.667 0.00 0.00 0.00 5.28
236 237 4.849310 AGTGTGCGTGCAACCCGT 62.849 61.111 0.00 0.00 0.00 5.28
237 238 4.605967 GTGTGCGTGCAACCCGTG 62.606 66.667 0.00 0.00 0.00 4.94
246 247 4.598257 CAACCCGTGCAGAGTAGG 57.402 61.111 0.00 0.00 0.00 3.18
249 250 3.388841 CCCGTGCAGAGTAGGGTT 58.611 61.111 0.00 0.00 39.05 4.11
250 251 2.587080 CCCGTGCAGAGTAGGGTTA 58.413 57.895 0.00 0.00 39.05 2.85
251 252 0.460311 CCCGTGCAGAGTAGGGTTAG 59.540 60.000 0.00 0.00 39.05 2.34
252 253 0.460311 CCGTGCAGAGTAGGGTTAGG 59.540 60.000 0.00 0.00 0.00 2.69
253 254 1.183549 CGTGCAGAGTAGGGTTAGGT 58.816 55.000 0.00 0.00 0.00 3.08
254 255 2.372264 CGTGCAGAGTAGGGTTAGGTA 58.628 52.381 0.00 0.00 0.00 3.08
255 256 2.957006 CGTGCAGAGTAGGGTTAGGTAT 59.043 50.000 0.00 0.00 0.00 2.73
256 257 3.383825 CGTGCAGAGTAGGGTTAGGTATT 59.616 47.826 0.00 0.00 0.00 1.89
257 258 4.694339 GTGCAGAGTAGGGTTAGGTATTG 58.306 47.826 0.00 0.00 0.00 1.90
258 259 3.709653 TGCAGAGTAGGGTTAGGTATTGG 59.290 47.826 0.00 0.00 0.00 3.16
259 260 3.071167 GCAGAGTAGGGTTAGGTATTGGG 59.929 52.174 0.00 0.00 0.00 4.12
260 261 3.071167 CAGAGTAGGGTTAGGTATTGGGC 59.929 52.174 0.00 0.00 0.00 5.36
261 262 2.371179 GAGTAGGGTTAGGTATTGGGCC 59.629 54.545 0.00 0.00 0.00 5.80
262 263 1.071228 GTAGGGTTAGGTATTGGGCCG 59.929 57.143 0.00 0.00 0.00 6.13
263 264 0.326808 AGGGTTAGGTATTGGGCCGA 60.327 55.000 0.00 0.00 0.00 5.54
264 265 0.108019 GGGTTAGGTATTGGGCCGAG 59.892 60.000 0.00 0.00 0.00 4.63
265 266 0.108019 GGTTAGGTATTGGGCCGAGG 59.892 60.000 0.00 0.00 0.00 4.63
266 267 0.534427 GTTAGGTATTGGGCCGAGGC 60.534 60.000 5.37 5.37 41.06 4.70
267 268 0.693092 TTAGGTATTGGGCCGAGGCT 60.693 55.000 14.33 0.00 41.60 4.58
268 269 1.407656 TAGGTATTGGGCCGAGGCTG 61.408 60.000 14.33 0.00 41.60 4.85
269 270 2.590092 GTATTGGGCCGAGGCTGT 59.410 61.111 14.33 0.80 41.60 4.40
270 271 1.077716 GTATTGGGCCGAGGCTGTT 60.078 57.895 14.33 0.00 41.60 3.16
271 272 0.679960 GTATTGGGCCGAGGCTGTTT 60.680 55.000 14.33 0.29 41.60 2.83
272 273 0.393808 TATTGGGCCGAGGCTGTTTC 60.394 55.000 14.33 0.00 41.60 2.78
273 274 2.142292 ATTGGGCCGAGGCTGTTTCT 62.142 55.000 14.33 0.00 41.60 2.52
274 275 2.747855 GGGCCGAGGCTGTTTCTG 60.748 66.667 14.33 0.00 41.60 3.02
275 276 2.747855 GGCCGAGGCTGTTTCTGG 60.748 66.667 14.33 0.00 41.60 3.86
276 277 2.747855 GCCGAGGCTGTTTCTGGG 60.748 66.667 6.90 0.00 38.26 4.45
277 278 2.747855 CCGAGGCTGTTTCTGGGC 60.748 66.667 0.00 0.00 0.00 5.36
278 279 2.747855 CGAGGCTGTTTCTGGGCC 60.748 66.667 0.00 0.00 45.57 5.80
282 283 3.376918 GCTGTTTCTGGGCCAGCC 61.377 66.667 29.02 18.14 44.49 4.85
283 284 3.058160 CTGTTTCTGGGCCAGCCG 61.058 66.667 29.02 6.82 36.85 5.52
284 285 3.850098 CTGTTTCTGGGCCAGCCGT 62.850 63.158 29.02 0.00 36.85 5.68
285 286 2.349755 GTTTCTGGGCCAGCCGTA 59.650 61.111 29.02 8.80 36.85 4.02
286 287 1.077716 GTTTCTGGGCCAGCCGTAT 60.078 57.895 29.02 0.00 36.85 3.06
287 288 1.095807 GTTTCTGGGCCAGCCGTATC 61.096 60.000 29.02 11.22 36.85 2.24
288 289 2.265467 TTTCTGGGCCAGCCGTATCC 62.265 60.000 29.02 0.00 36.85 2.59
289 290 4.256180 CTGGGCCAGCCGTATCCC 62.256 72.222 22.68 0.00 39.22 3.85
291 292 3.804329 GGGCCAGCCGTATCCCAA 61.804 66.667 4.39 0.00 38.62 4.12
292 293 2.274104 GGCCAGCCGTATCCCAAA 59.726 61.111 0.00 0.00 0.00 3.28
293 294 2.119029 GGCCAGCCGTATCCCAAAC 61.119 63.158 0.00 0.00 0.00 2.93
294 295 1.077716 GCCAGCCGTATCCCAAACT 60.078 57.895 0.00 0.00 0.00 2.66
295 296 0.679960 GCCAGCCGTATCCCAAACTT 60.680 55.000 0.00 0.00 0.00 2.66
296 297 1.094785 CCAGCCGTATCCCAAACTTG 58.905 55.000 0.00 0.00 0.00 3.16
297 298 1.613255 CCAGCCGTATCCCAAACTTGT 60.613 52.381 0.00 0.00 0.00 3.16
298 299 1.737793 CAGCCGTATCCCAAACTTGTC 59.262 52.381 0.00 0.00 0.00 3.18
299 300 1.349688 AGCCGTATCCCAAACTTGTCA 59.650 47.619 0.00 0.00 0.00 3.58
300 301 1.467342 GCCGTATCCCAAACTTGTCAC 59.533 52.381 0.00 0.00 0.00 3.67
301 302 1.730064 CCGTATCCCAAACTTGTCACG 59.270 52.381 0.00 0.00 0.00 4.35
302 303 2.409975 CGTATCCCAAACTTGTCACGT 58.590 47.619 0.00 0.00 0.00 4.49
303 304 3.577667 CGTATCCCAAACTTGTCACGTA 58.422 45.455 0.00 0.00 0.00 3.57
304 305 3.365820 CGTATCCCAAACTTGTCACGTAC 59.634 47.826 0.00 0.00 0.00 3.67
305 306 1.855513 TCCCAAACTTGTCACGTACG 58.144 50.000 15.01 15.01 0.00 3.67
306 307 1.136695 TCCCAAACTTGTCACGTACGT 59.863 47.619 16.72 16.72 0.00 3.57
307 308 1.259507 CCCAAACTTGTCACGTACGTG 59.740 52.381 36.46 36.46 46.64 4.49
308 309 1.928503 CCAAACTTGTCACGTACGTGT 59.071 47.619 38.70 22.50 45.55 4.49
309 310 2.034339 CCAAACTTGTCACGTACGTGTC 60.034 50.000 38.70 34.35 45.55 3.67
310 311 1.843992 AACTTGTCACGTACGTGTCC 58.156 50.000 38.70 30.74 45.55 4.02
311 312 1.027357 ACTTGTCACGTACGTGTCCT 58.973 50.000 38.70 20.37 45.55 3.85
312 313 1.268896 ACTTGTCACGTACGTGTCCTG 60.269 52.381 38.70 29.43 45.55 3.86
313 314 0.595567 TTGTCACGTACGTGTCCTGC 60.596 55.000 38.70 25.97 45.55 4.85
314 315 1.731969 GTCACGTACGTGTCCTGCC 60.732 63.158 38.70 20.93 45.55 4.85
315 316 2.803670 CACGTACGTGTCCTGCCG 60.804 66.667 34.48 11.58 40.91 5.69
316 317 3.289834 ACGTACGTGTCCTGCCGT 61.290 61.111 22.14 0.00 40.87 5.68
317 318 1.965930 ACGTACGTGTCCTGCCGTA 60.966 57.895 22.14 0.00 38.43 4.02
318 319 1.308069 ACGTACGTGTCCTGCCGTAT 61.308 55.000 22.14 0.00 41.10 3.06
319 320 0.590732 CGTACGTGTCCTGCCGTATC 60.591 60.000 7.22 0.00 41.10 2.24
320 321 0.248784 GTACGTGTCCTGCCGTATCC 60.249 60.000 0.00 0.00 41.10 2.59
321 322 1.386525 TACGTGTCCTGCCGTATCCC 61.387 60.000 0.00 0.00 38.43 3.85
322 323 2.423898 CGTGTCCTGCCGTATCCCT 61.424 63.158 0.00 0.00 0.00 4.20
323 324 1.144057 GTGTCCTGCCGTATCCCTG 59.856 63.158 0.00 0.00 0.00 4.45
324 325 2.109181 GTCCTGCCGTATCCCTGC 59.891 66.667 0.00 0.00 0.00 4.85
325 326 2.364973 TCCTGCCGTATCCCTGCA 60.365 61.111 0.00 0.00 0.00 4.41
326 327 1.766059 TCCTGCCGTATCCCTGCAT 60.766 57.895 0.00 0.00 33.97 3.96
327 328 1.149174 CCTGCCGTATCCCTGCATT 59.851 57.895 0.00 0.00 33.97 3.56
328 329 0.466189 CCTGCCGTATCCCTGCATTT 60.466 55.000 0.00 0.00 33.97 2.32
329 330 1.392589 CTGCCGTATCCCTGCATTTT 58.607 50.000 0.00 0.00 33.97 1.82
330 331 1.750778 CTGCCGTATCCCTGCATTTTT 59.249 47.619 0.00 0.00 33.97 1.94
366 367 4.918810 AATCAAAAATCGGGGATACTGC 57.081 40.909 0.00 0.00 0.00 4.40
367 368 3.644966 TCAAAAATCGGGGATACTGCT 57.355 42.857 0.00 0.00 0.00 4.24
368 369 3.541632 TCAAAAATCGGGGATACTGCTC 58.458 45.455 0.00 0.00 0.00 4.26
369 370 3.054728 TCAAAAATCGGGGATACTGCTCA 60.055 43.478 0.00 0.00 0.00 4.26
370 371 2.918712 AAATCGGGGATACTGCTCAG 57.081 50.000 0.00 0.00 0.00 3.35
371 372 1.794714 AATCGGGGATACTGCTCAGT 58.205 50.000 7.73 7.73 45.02 3.41
372 373 1.794714 ATCGGGGATACTGCTCAGTT 58.205 50.000 7.92 0.00 42.54 3.16
373 374 1.112113 TCGGGGATACTGCTCAGTTC 58.888 55.000 7.92 5.91 42.54 3.01
374 375 0.249073 CGGGGATACTGCTCAGTTCG 60.249 60.000 7.92 2.41 42.54 3.95
375 376 0.530870 GGGGATACTGCTCAGTTCGC 60.531 60.000 7.92 12.25 42.54 4.70
376 377 0.872021 GGGATACTGCTCAGTTCGCG 60.872 60.000 7.92 0.00 42.54 5.87
377 378 0.179134 GGATACTGCTCAGTTCGCGT 60.179 55.000 5.77 0.00 42.54 6.01
378 379 1.065102 GGATACTGCTCAGTTCGCGTA 59.935 52.381 5.77 0.00 42.54 4.42
379 380 2.287668 GGATACTGCTCAGTTCGCGTAT 60.288 50.000 5.77 0.00 42.54 3.06
380 381 2.470196 TACTGCTCAGTTCGCGTATC 57.530 50.000 5.77 0.00 42.54 2.24
381 382 0.179134 ACTGCTCAGTTCGCGTATCC 60.179 55.000 5.77 0.00 38.83 2.59
382 383 0.101399 CTGCTCAGTTCGCGTATCCT 59.899 55.000 5.77 0.00 0.00 3.24
383 384 0.179137 TGCTCAGTTCGCGTATCCTG 60.179 55.000 5.77 8.28 0.00 3.86
384 385 1.483424 GCTCAGTTCGCGTATCCTGC 61.483 60.000 5.77 1.88 0.00 4.85
385 386 0.872021 CTCAGTTCGCGTATCCTGCC 60.872 60.000 5.77 0.00 0.00 4.85
386 387 2.104331 AGTTCGCGTATCCTGCCG 59.896 61.111 5.77 0.00 0.00 5.69
387 388 2.202703 GTTCGCGTATCCTGCCGT 60.203 61.111 5.77 0.00 0.00 5.68
388 389 1.064621 GTTCGCGTATCCTGCCGTA 59.935 57.895 5.77 0.00 0.00 4.02
389 390 0.318445 GTTCGCGTATCCTGCCGTAT 60.318 55.000 5.77 0.00 0.00 3.06
390 391 0.039798 TTCGCGTATCCTGCCGTATC 60.040 55.000 5.77 0.00 0.00 2.24
391 392 1.443872 CGCGTATCCTGCCGTATCC 60.444 63.158 0.00 0.00 0.00 2.59
392 393 1.080025 GCGTATCCTGCCGTATCCC 60.080 63.158 0.00 0.00 0.00 3.85
393 394 1.211969 CGTATCCTGCCGTATCCCG 59.788 63.158 0.00 0.00 0.00 5.14
394 395 1.080025 GTATCCTGCCGTATCCCGC 60.080 63.158 0.00 0.00 34.38 6.13
395 396 2.280552 TATCCTGCCGTATCCCGCC 61.281 63.158 0.00 0.00 34.38 6.13
401 402 4.580551 CCGTATCCCGCCGTGTCC 62.581 72.222 0.00 0.00 34.38 4.02
402 403 4.580551 CGTATCCCGCCGTGTCCC 62.581 72.222 0.00 0.00 0.00 4.46
403 404 3.152400 GTATCCCGCCGTGTCCCT 61.152 66.667 0.00 0.00 0.00 4.20
404 405 3.151710 TATCCCGCCGTGTCCCTG 61.152 66.667 0.00 0.00 0.00 4.45
405 406 3.968837 TATCCCGCCGTGTCCCTGT 62.969 63.158 0.00 0.00 0.00 4.00
406 407 2.570774 TATCCCGCCGTGTCCCTGTA 62.571 60.000 0.00 0.00 0.00 2.74
407 408 3.467226 CCCGCCGTGTCCCTGTAT 61.467 66.667 0.00 0.00 0.00 2.29
408 409 2.106332 CCGCCGTGTCCCTGTATC 59.894 66.667 0.00 0.00 0.00 2.24
409 410 2.106332 CGCCGTGTCCCTGTATCC 59.894 66.667 0.00 0.00 0.00 2.59
410 411 2.423898 CGCCGTGTCCCTGTATCCT 61.424 63.158 0.00 0.00 0.00 3.24
411 412 1.144057 GCCGTGTCCCTGTATCCTG 59.856 63.158 0.00 0.00 0.00 3.86
412 413 1.144057 CCGTGTCCCTGTATCCTGC 59.856 63.158 0.00 0.00 0.00 4.85
413 414 1.144057 CGTGTCCCTGTATCCTGCC 59.856 63.158 0.00 0.00 0.00 4.85
414 415 1.144057 GTGTCCCTGTATCCTGCCG 59.856 63.158 0.00 0.00 0.00 5.69
415 416 1.305802 TGTCCCTGTATCCTGCCGT 60.306 57.895 0.00 0.00 0.00 5.68
416 417 0.032912 TGTCCCTGTATCCTGCCGTA 60.033 55.000 0.00 0.00 0.00 4.02
417 418 1.339097 GTCCCTGTATCCTGCCGTAT 58.661 55.000 0.00 0.00 0.00 3.06
418 419 1.272769 GTCCCTGTATCCTGCCGTATC 59.727 57.143 0.00 0.00 0.00 2.24
419 420 1.133294 TCCCTGTATCCTGCCGTATCA 60.133 52.381 0.00 0.00 0.00 2.15
420 421 1.273606 CCCTGTATCCTGCCGTATCAG 59.726 57.143 0.00 0.00 0.00 2.90
421 422 2.239400 CCTGTATCCTGCCGTATCAGA 58.761 52.381 0.00 0.00 36.19 3.27
422 423 2.628178 CCTGTATCCTGCCGTATCAGAA 59.372 50.000 0.00 0.00 36.19 3.02
423 424 3.553096 CCTGTATCCTGCCGTATCAGAAC 60.553 52.174 0.00 0.00 36.19 3.01
424 425 2.034179 TGTATCCTGCCGTATCAGAACG 59.966 50.000 0.00 0.00 42.49 3.95
432 433 1.399572 CGTATCAGAACGGCAGATCG 58.600 55.000 0.00 0.00 39.19 3.69
433 434 1.772182 GTATCAGAACGGCAGATCGG 58.228 55.000 0.00 0.00 0.00 4.18
434 435 0.032130 TATCAGAACGGCAGATCGGC 59.968 55.000 9.58 9.58 0.00 5.54
435 436 1.960040 ATCAGAACGGCAGATCGGCA 61.960 55.000 19.63 0.00 41.26 5.69
436 437 2.169789 CAGAACGGCAGATCGGCAG 61.170 63.158 19.63 17.57 41.26 4.85
437 438 2.125512 GAACGGCAGATCGGCAGT 60.126 61.111 19.63 18.26 44.06 4.40
438 439 2.347490 AACGGCAGATCGGCAGTT 59.653 55.556 25.34 25.34 45.21 3.16
439 440 2.347490 ACGGCAGATCGGCAGTTT 59.653 55.556 19.63 0.00 39.14 2.66
440 441 1.741770 ACGGCAGATCGGCAGTTTC 60.742 57.895 19.63 0.71 39.14 2.78
441 442 1.448540 CGGCAGATCGGCAGTTTCT 60.449 57.895 19.63 0.00 41.26 2.52
442 443 1.699656 CGGCAGATCGGCAGTTTCTG 61.700 60.000 19.63 12.53 41.26 3.02
451 452 3.244105 CAGTTTCTGCCGTGTCCG 58.756 61.111 0.00 0.00 0.00 4.79
452 453 1.594293 CAGTTTCTGCCGTGTCCGT 60.594 57.895 0.00 0.00 0.00 4.69
453 454 1.594293 AGTTTCTGCCGTGTCCGTG 60.594 57.895 0.00 0.00 0.00 4.94
454 455 2.970324 TTTCTGCCGTGTCCGTGC 60.970 61.111 0.00 0.00 0.00 5.34
455 456 3.454587 TTTCTGCCGTGTCCGTGCT 62.455 57.895 0.00 0.00 33.31 4.40
456 457 2.933878 TTTCTGCCGTGTCCGTGCTT 62.934 55.000 0.00 0.00 33.31 3.91
457 458 2.933878 TTCTGCCGTGTCCGTGCTTT 62.934 55.000 0.00 0.00 33.31 3.51
458 459 3.240606 CTGCCGTGTCCGTGCTTTG 62.241 63.158 0.00 0.00 33.31 2.77
459 460 3.276846 GCCGTGTCCGTGCTTTGT 61.277 61.111 0.00 0.00 0.00 2.83
460 461 1.957186 GCCGTGTCCGTGCTTTGTA 60.957 57.895 0.00 0.00 0.00 2.41
461 462 1.897398 GCCGTGTCCGTGCTTTGTAG 61.897 60.000 0.00 0.00 0.00 2.74
462 463 1.289109 CCGTGTCCGTGCTTTGTAGG 61.289 60.000 0.00 0.00 0.00 3.18
463 464 1.289109 CGTGTCCGTGCTTTGTAGGG 61.289 60.000 0.00 0.00 0.00 3.53
464 465 0.034337 GTGTCCGTGCTTTGTAGGGA 59.966 55.000 0.00 0.00 30.48 4.20
550 562 5.822519 GTGGCAATACTCCATGTAAGAATGA 59.177 40.000 0.00 0.00 35.81 2.57
617 629 6.761242 TCCTTTTATGATGGTGATTCAGTACG 59.239 38.462 0.00 0.00 0.00 3.67
723 1140 8.674607 GTGTTAATGTAATGGAAGTTAAGAGGG 58.325 37.037 0.00 0.00 0.00 4.30
814 1250 4.295201 TCAAGCCTATCCTTACCAAGCTA 58.705 43.478 0.00 0.00 0.00 3.32
887 1323 7.765307 ACTGAACTGCAAATTTACCATCATAG 58.235 34.615 0.00 0.00 0.00 2.23
962 1423 7.751047 TGTGATAATTCGTACTACAAGCTTC 57.249 36.000 0.00 0.00 0.00 3.86
1145 1606 3.565902 AGTTTCAGCAAGTTTACTGGAGC 59.434 43.478 3.44 0.00 34.57 4.70
1196 1660 3.947910 ACCTTTCCGTAGAATCGTTCA 57.052 42.857 1.58 0.00 0.00 3.18
1197 1661 4.467198 ACCTTTCCGTAGAATCGTTCAT 57.533 40.909 1.58 0.00 0.00 2.57
1198 1662 4.828829 ACCTTTCCGTAGAATCGTTCATT 58.171 39.130 1.58 0.00 0.00 2.57
1232 1697 6.862944 TTTAACTTTGTGAAACTTTGCGAG 57.137 33.333 0.00 0.00 38.04 5.03
1470 3428 6.493166 TGGGATCATTATCATGGGTATTTCC 58.507 40.000 0.00 0.00 33.41 3.13
1516 3495 6.429692 CAGTATGACTGGTTTCATGTTTACCA 59.570 38.462 13.14 13.14 42.35 3.25
1596 3577 4.370049 TGTTTGTGCCATGTTGATCTTTG 58.630 39.130 0.00 0.00 0.00 2.77
1668 3663 5.166013 AGTATTGGTCCTATCCCAGGTTA 57.834 43.478 0.00 0.00 45.71 2.85
1909 3918 5.634896 ACGAAAATCTGCTCTATTTGCTTG 58.365 37.500 0.00 0.00 0.00 4.01
2498 4524 1.075601 ATCCTCCTGCCTGGTTTCAA 58.924 50.000 0.00 0.00 37.07 2.69
2540 4647 1.265236 TGAATTGGGGGATTGTGTGC 58.735 50.000 0.00 0.00 0.00 4.57
2541 4648 1.203162 TGAATTGGGGGATTGTGTGCT 60.203 47.619 0.00 0.00 0.00 4.40
2542 4649 1.478105 GAATTGGGGGATTGTGTGCTC 59.522 52.381 0.00 0.00 0.00 4.26
2543 4650 0.706433 ATTGGGGGATTGTGTGCTCT 59.294 50.000 0.00 0.00 0.00 4.09
2544 4651 0.038166 TTGGGGGATTGTGTGCTCTC 59.962 55.000 0.00 0.00 0.00 3.20
2545 4652 0.842030 TGGGGGATTGTGTGCTCTCT 60.842 55.000 0.00 0.00 0.00 3.10
2546 4653 0.329596 GGGGGATTGTGTGCTCTCTT 59.670 55.000 0.00 0.00 0.00 2.85
2547 4654 1.680249 GGGGGATTGTGTGCTCTCTTC 60.680 57.143 0.00 0.00 0.00 2.87
2548 4655 1.680249 GGGGATTGTGTGCTCTCTTCC 60.680 57.143 0.00 0.00 0.00 3.46
2549 4656 1.003580 GGGATTGTGTGCTCTCTTCCA 59.996 52.381 10.42 0.00 0.00 3.53
2550 4657 2.354259 GGATTGTGTGCTCTCTTCCAG 58.646 52.381 0.00 0.00 0.00 3.86
2551 4658 2.354259 GATTGTGTGCTCTCTTCCAGG 58.646 52.381 0.00 0.00 0.00 4.45
2552 4659 1.131638 TTGTGTGCTCTCTTCCAGGT 58.868 50.000 0.00 0.00 0.00 4.00
2553 4660 0.681733 TGTGTGCTCTCTTCCAGGTC 59.318 55.000 0.00 0.00 0.00 3.85
2554 4661 0.681733 GTGTGCTCTCTTCCAGGTCA 59.318 55.000 0.00 0.00 0.00 4.02
2555 4662 1.070758 GTGTGCTCTCTTCCAGGTCAA 59.929 52.381 0.00 0.00 0.00 3.18
2556 4663 1.345741 TGTGCTCTCTTCCAGGTCAAG 59.654 52.381 0.00 0.00 0.00 3.02
2557 4664 1.620819 GTGCTCTCTTCCAGGTCAAGA 59.379 52.381 0.00 0.00 0.00 3.02
2558 4665 2.235898 GTGCTCTCTTCCAGGTCAAGAT 59.764 50.000 0.00 0.00 0.00 2.40
2559 4666 2.499289 TGCTCTCTTCCAGGTCAAGATC 59.501 50.000 0.00 0.00 0.00 2.75
2560 4667 2.499289 GCTCTCTTCCAGGTCAAGATCA 59.501 50.000 0.00 0.00 0.00 2.92
2561 4668 3.678529 GCTCTCTTCCAGGTCAAGATCAC 60.679 52.174 0.00 0.00 0.00 3.06
2562 4669 3.510459 TCTCTTCCAGGTCAAGATCACA 58.490 45.455 0.00 0.00 0.00 3.58
2563 4670 3.513119 TCTCTTCCAGGTCAAGATCACAG 59.487 47.826 0.00 0.00 0.00 3.66
2564 4671 2.568956 TCTTCCAGGTCAAGATCACAGG 59.431 50.000 0.00 0.00 0.00 4.00
2565 4672 1.279496 TCCAGGTCAAGATCACAGGG 58.721 55.000 0.00 0.00 0.00 4.45
2566 4673 0.987294 CCAGGTCAAGATCACAGGGT 59.013 55.000 0.00 0.00 0.00 4.34
2567 4674 1.352352 CCAGGTCAAGATCACAGGGTT 59.648 52.381 0.00 0.00 0.00 4.11
2568 4675 2.430465 CAGGTCAAGATCACAGGGTTG 58.570 52.381 0.00 0.00 0.00 3.77
2569 4676 2.057922 AGGTCAAGATCACAGGGTTGT 58.942 47.619 0.00 0.00 38.31 3.32
2570 4677 2.039084 AGGTCAAGATCACAGGGTTGTC 59.961 50.000 0.00 0.00 34.62 3.18
2571 4678 2.427506 GTCAAGATCACAGGGTTGTCC 58.572 52.381 0.00 0.00 34.62 4.02
2679 4786 1.579429 GTGATGGGCGTTGTTGTCC 59.421 57.895 0.00 0.00 0.00 4.02
2740 4847 5.938125 GGGTTACTGACAACATCTACAACAT 59.062 40.000 0.00 0.00 0.00 2.71
2793 4900 1.842562 ACACCCATGATCTCTTCCTGG 59.157 52.381 0.00 0.00 39.24 4.45
2983 5210 1.066587 GTGATCTCTTCGGGGCGAG 59.933 63.158 0.00 0.00 37.14 5.03
3007 5234 0.393077 CGGAGTTGTCCTGGTCACTT 59.607 55.000 0.00 0.00 41.34 3.16
3093 5332 1.686052 CTCTTCCATCCTCTCTTCCCG 59.314 57.143 0.00 0.00 0.00 5.14
3141 5380 1.073923 GGGGTTGTCCTGTGTGATCTT 59.926 52.381 0.00 0.00 35.33 2.40
3687 5966 7.731054 ACCTCTGGAAACTCTACATCATAATC 58.269 38.462 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.672673 CAACCTCTTCCTATTTTATTCTTCTGA 57.327 33.333 0.00 0.00 0.00 3.27
4 5 9.672673 TCAACCTCTTCCTATTTTATTCTTCTG 57.327 33.333 0.00 0.00 0.00 3.02
5 6 9.898152 CTCAACCTCTTCCTATTTTATTCTTCT 57.102 33.333 0.00 0.00 0.00 2.85
6 7 9.114952 CCTCAACCTCTTCCTATTTTATTCTTC 57.885 37.037 0.00 0.00 0.00 2.87
7 8 8.836735 TCCTCAACCTCTTCCTATTTTATTCTT 58.163 33.333 0.00 0.00 0.00 2.52
8 9 8.393959 TCCTCAACCTCTTCCTATTTTATTCT 57.606 34.615 0.00 0.00 0.00 2.40
9 10 9.634021 ATTCCTCAACCTCTTCCTATTTTATTC 57.366 33.333 0.00 0.00 0.00 1.75
10 11 9.413734 CATTCCTCAACCTCTTCCTATTTTATT 57.586 33.333 0.00 0.00 0.00 1.40
11 12 8.781951 TCATTCCTCAACCTCTTCCTATTTTAT 58.218 33.333 0.00 0.00 0.00 1.40
12 13 8.158025 TCATTCCTCAACCTCTTCCTATTTTA 57.842 34.615 0.00 0.00 0.00 1.52
13 14 7.032598 TCATTCCTCAACCTCTTCCTATTTT 57.967 36.000 0.00 0.00 0.00 1.82
14 15 6.445139 TCTCATTCCTCAACCTCTTCCTATTT 59.555 38.462 0.00 0.00 0.00 1.40
15 16 5.966935 TCTCATTCCTCAACCTCTTCCTATT 59.033 40.000 0.00 0.00 0.00 1.73
16 17 5.533112 TCTCATTCCTCAACCTCTTCCTAT 58.467 41.667 0.00 0.00 0.00 2.57
17 18 4.947883 TCTCATTCCTCAACCTCTTCCTA 58.052 43.478 0.00 0.00 0.00 2.94
18 19 3.774216 CTCTCATTCCTCAACCTCTTCCT 59.226 47.826 0.00 0.00 0.00 3.36
19 20 3.118445 CCTCTCATTCCTCAACCTCTTCC 60.118 52.174 0.00 0.00 0.00 3.46
20 21 3.681313 GCCTCTCATTCCTCAACCTCTTC 60.681 52.174 0.00 0.00 0.00 2.87
21 22 2.238395 GCCTCTCATTCCTCAACCTCTT 59.762 50.000 0.00 0.00 0.00 2.85
22 23 1.836802 GCCTCTCATTCCTCAACCTCT 59.163 52.381 0.00 0.00 0.00 3.69
23 24 1.836802 AGCCTCTCATTCCTCAACCTC 59.163 52.381 0.00 0.00 0.00 3.85
24 25 1.558756 CAGCCTCTCATTCCTCAACCT 59.441 52.381 0.00 0.00 0.00 3.50
25 26 1.280421 ACAGCCTCTCATTCCTCAACC 59.720 52.381 0.00 0.00 0.00 3.77
26 27 2.626840 GACAGCCTCTCATTCCTCAAC 58.373 52.381 0.00 0.00 0.00 3.18
27 28 1.205655 CGACAGCCTCTCATTCCTCAA 59.794 52.381 0.00 0.00 0.00 3.02
28 29 0.820226 CGACAGCCTCTCATTCCTCA 59.180 55.000 0.00 0.00 0.00 3.86
29 30 0.103937 CCGACAGCCTCTCATTCCTC 59.896 60.000 0.00 0.00 0.00 3.71
30 31 1.333636 CCCGACAGCCTCTCATTCCT 61.334 60.000 0.00 0.00 0.00 3.36
31 32 1.144936 CCCGACAGCCTCTCATTCC 59.855 63.158 0.00 0.00 0.00 3.01
32 33 0.250513 AACCCGACAGCCTCTCATTC 59.749 55.000 0.00 0.00 0.00 2.67
33 34 1.207329 GTAACCCGACAGCCTCTCATT 59.793 52.381 0.00 0.00 0.00 2.57
34 35 0.824759 GTAACCCGACAGCCTCTCAT 59.175 55.000 0.00 0.00 0.00 2.90
35 36 1.255667 GGTAACCCGACAGCCTCTCA 61.256 60.000 0.00 0.00 0.00 3.27
36 37 0.971447 AGGTAACCCGACAGCCTCTC 60.971 60.000 0.00 0.00 35.12 3.20
37 38 1.078710 AGGTAACCCGACAGCCTCT 59.921 57.895 0.00 0.00 35.12 3.69
38 39 1.218316 CAGGTAACCCGACAGCCTC 59.782 63.158 0.00 0.00 35.12 4.70
39 40 1.535687 ACAGGTAACCCGACAGCCT 60.536 57.895 0.00 0.00 35.12 4.58
40 41 1.375523 CACAGGTAACCCGACAGCC 60.376 63.158 0.00 0.00 35.12 4.85
41 42 0.669625 GTCACAGGTAACCCGACAGC 60.670 60.000 0.00 0.00 35.12 4.40
42 43 0.966920 AGTCACAGGTAACCCGACAG 59.033 55.000 0.00 0.00 33.28 3.51
43 44 0.677288 CAGTCACAGGTAACCCGACA 59.323 55.000 0.00 0.00 33.28 4.35
44 45 0.669625 GCAGTCACAGGTAACCCGAC 60.670 60.000 0.00 0.00 35.12 4.79
45 46 1.669440 GCAGTCACAGGTAACCCGA 59.331 57.895 0.00 0.00 35.12 5.14
46 47 1.736645 CGCAGTCACAGGTAACCCG 60.737 63.158 0.00 0.00 35.12 5.28
47 48 0.389948 CTCGCAGTCACAGGTAACCC 60.390 60.000 0.00 0.00 37.17 4.11
48 49 0.389948 CCTCGCAGTCACAGGTAACC 60.390 60.000 0.00 0.00 37.17 2.85
49 50 0.601558 TCCTCGCAGTCACAGGTAAC 59.398 55.000 0.00 0.00 0.00 2.50
50 51 0.888619 CTCCTCGCAGTCACAGGTAA 59.111 55.000 0.00 0.00 0.00 2.85
51 52 0.037734 TCTCCTCGCAGTCACAGGTA 59.962 55.000 0.00 0.00 0.00 3.08
52 53 1.228583 TCTCCTCGCAGTCACAGGT 60.229 57.895 0.00 0.00 0.00 4.00
53 54 1.510383 CTCTCCTCGCAGTCACAGG 59.490 63.158 0.00 0.00 0.00 4.00
54 55 1.510383 CCTCTCCTCGCAGTCACAG 59.490 63.158 0.00 0.00 0.00 3.66
55 56 2.640302 GCCTCTCCTCGCAGTCACA 61.640 63.158 0.00 0.00 0.00 3.58
56 57 2.183046 GCCTCTCCTCGCAGTCAC 59.817 66.667 0.00 0.00 0.00 3.67
57 58 2.036414 AGCCTCTCCTCGCAGTCA 59.964 61.111 0.00 0.00 0.00 3.41
58 59 2.493973 CAGCCTCTCCTCGCAGTC 59.506 66.667 0.00 0.00 0.00 3.51
59 60 3.768922 GCAGCCTCTCCTCGCAGT 61.769 66.667 0.00 0.00 0.00 4.40
60 61 3.459965 AGCAGCCTCTCCTCGCAG 61.460 66.667 0.00 0.00 0.00 5.18
61 62 3.767806 CAGCAGCCTCTCCTCGCA 61.768 66.667 0.00 0.00 0.00 5.10
62 63 4.527583 CCAGCAGCCTCTCCTCGC 62.528 72.222 0.00 0.00 0.00 5.03
63 64 3.073735 ACCAGCAGCCTCTCCTCG 61.074 66.667 0.00 0.00 0.00 4.63
64 65 1.685421 AGACCAGCAGCCTCTCCTC 60.685 63.158 0.00 0.00 0.00 3.71
65 66 1.988956 CAGACCAGCAGCCTCTCCT 60.989 63.158 0.00 0.00 0.00 3.69
66 67 2.583520 CAGACCAGCAGCCTCTCC 59.416 66.667 0.00 0.00 0.00 3.71
67 68 2.583520 CCAGACCAGCAGCCTCTC 59.416 66.667 0.00 0.00 0.00 3.20
68 69 3.007920 CCCAGACCAGCAGCCTCT 61.008 66.667 0.00 0.00 0.00 3.69
69 70 4.106925 CCCCAGACCAGCAGCCTC 62.107 72.222 0.00 0.00 0.00 4.70
72 73 3.009115 TACCCCCAGACCAGCAGC 61.009 66.667 0.00 0.00 0.00 5.25
73 74 1.613630 ACTACCCCCAGACCAGCAG 60.614 63.158 0.00 0.00 0.00 4.24
74 75 1.918293 CACTACCCCCAGACCAGCA 60.918 63.158 0.00 0.00 0.00 4.41
75 76 2.670148 CCACTACCCCCAGACCAGC 61.670 68.421 0.00 0.00 0.00 4.85
76 77 1.229529 ACCACTACCCCCAGACCAG 60.230 63.158 0.00 0.00 0.00 4.00
77 78 1.229400 GACCACTACCCCCAGACCA 60.229 63.158 0.00 0.00 0.00 4.02
78 79 2.356780 CGACCACTACCCCCAGACC 61.357 68.421 0.00 0.00 0.00 3.85
79 80 3.015312 GCGACCACTACCCCCAGAC 62.015 68.421 0.00 0.00 0.00 3.51
80 81 2.682494 GCGACCACTACCCCCAGA 60.682 66.667 0.00 0.00 0.00 3.86
81 82 3.782443 GGCGACCACTACCCCCAG 61.782 72.222 0.00 0.00 0.00 4.45
82 83 4.326227 AGGCGACCACTACCCCCA 62.326 66.667 0.00 0.00 0.00 4.96
83 84 3.468140 GAGGCGACCACTACCCCC 61.468 72.222 0.00 0.00 0.00 5.40
84 85 2.363925 AGAGGCGACCACTACCCC 60.364 66.667 0.00 0.00 0.00 4.95
85 86 2.424733 GGAGAGGCGACCACTACCC 61.425 68.421 0.00 0.00 0.00 3.69
86 87 1.668101 CTGGAGAGGCGACCACTACC 61.668 65.000 3.80 4.82 32.44 3.18
87 88 0.966370 ACTGGAGAGGCGACCACTAC 60.966 60.000 0.00 0.00 32.44 2.73
88 89 0.680280 GACTGGAGAGGCGACCACTA 60.680 60.000 0.00 0.00 32.44 2.74
89 90 1.979693 GACTGGAGAGGCGACCACT 60.980 63.158 0.00 0.00 32.44 4.00
90 91 2.574399 GACTGGAGAGGCGACCAC 59.426 66.667 0.00 0.00 32.44 4.16
91 92 2.680352 GGACTGGAGAGGCGACCA 60.680 66.667 0.00 0.00 34.81 4.02
92 93 2.680352 TGGACTGGAGAGGCGACC 60.680 66.667 0.00 0.00 0.00 4.79
93 94 2.716017 CCTGGACTGGAGAGGCGAC 61.716 68.421 0.00 0.00 0.00 5.19
94 95 2.363018 CCTGGACTGGAGAGGCGA 60.363 66.667 0.00 0.00 0.00 5.54
95 96 4.154347 GCCTGGACTGGAGAGGCG 62.154 72.222 0.00 0.00 42.84 5.52
97 98 2.040278 AGGCCTGGACTGGAGAGG 59.960 66.667 3.11 0.00 0.00 3.69
98 99 2.422231 CGAGGCCTGGACTGGAGAG 61.422 68.421 12.00 0.00 0.00 3.20
99 100 2.363018 CGAGGCCTGGACTGGAGA 60.363 66.667 12.00 0.00 0.00 3.71
100 101 4.154347 GCGAGGCCTGGACTGGAG 62.154 72.222 20.35 3.78 0.00 3.86
130 131 3.958147 ATGCCGCCACCTGAACTCG 62.958 63.158 0.00 0.00 0.00 4.18
131 132 2.045926 ATGCCGCCACCTGAACTC 60.046 61.111 0.00 0.00 0.00 3.01
132 133 2.045926 GATGCCGCCACCTGAACT 60.046 61.111 0.00 0.00 0.00 3.01
133 134 2.045926 AGATGCCGCCACCTGAAC 60.046 61.111 0.00 0.00 0.00 3.18
134 135 2.268920 GAGATGCCGCCACCTGAA 59.731 61.111 0.00 0.00 0.00 3.02
135 136 4.147449 CGAGATGCCGCCACCTGA 62.147 66.667 0.00 0.00 0.00 3.86
136 137 3.451556 ATCGAGATGCCGCCACCTG 62.452 63.158 0.00 0.00 0.00 4.00
137 138 3.157217 GATCGAGATGCCGCCACCT 62.157 63.158 0.00 0.00 0.00 4.00
138 139 2.663188 GATCGAGATGCCGCCACC 60.663 66.667 0.00 0.00 0.00 4.61
139 140 2.663188 GGATCGAGATGCCGCCAC 60.663 66.667 0.00 0.00 0.00 5.01
140 141 3.153781 TGGATCGAGATGCCGCCA 61.154 61.111 2.23 0.00 0.00 5.69
141 142 2.356793 CTGGATCGAGATGCCGCC 60.357 66.667 0.00 0.00 0.00 6.13
142 143 2.356793 CCTGGATCGAGATGCCGC 60.357 66.667 6.27 0.00 0.00 6.53
143 144 1.288439 CTCCTGGATCGAGATGCCG 59.712 63.158 6.27 0.00 0.00 5.69
144 145 1.670590 CCTCCTGGATCGAGATGCC 59.329 63.158 6.27 0.00 34.57 4.40
145 146 1.005156 GCCTCCTGGATCGAGATGC 60.005 63.158 6.27 2.17 34.57 3.91
146 147 1.288439 CGCCTCCTGGATCGAGATG 59.712 63.158 6.27 0.00 34.57 2.90
147 148 1.905843 CCGCCTCCTGGATCGAGAT 60.906 63.158 16.75 0.00 34.57 2.75
148 149 2.519541 CCGCCTCCTGGATCGAGA 60.520 66.667 16.75 0.00 34.57 4.04
149 150 4.292178 GCCGCCTCCTGGATCGAG 62.292 72.222 16.75 0.00 34.57 4.04
165 166 4.374702 CAGCACTGAACACGCCGC 62.375 66.667 0.00 0.00 0.00 6.53
166 167 4.374702 GCAGCACTGAACACGCCG 62.375 66.667 0.81 0.00 0.00 6.46
167 168 4.030452 GGCAGCACTGAACACGCC 62.030 66.667 0.81 0.00 0.00 5.68
168 169 2.974698 AGGCAGCACTGAACACGC 60.975 61.111 0.81 0.00 0.00 5.34
169 170 2.610694 CCAGGCAGCACTGAACACG 61.611 63.158 11.35 0.00 40.97 4.49
170 171 2.263741 CCCAGGCAGCACTGAACAC 61.264 63.158 11.35 0.00 40.97 3.32
171 172 2.113774 CCCAGGCAGCACTGAACA 59.886 61.111 11.35 0.00 40.97 3.18
172 173 1.673665 CTCCCAGGCAGCACTGAAC 60.674 63.158 11.35 0.00 40.97 3.18
173 174 2.752358 CTCCCAGGCAGCACTGAA 59.248 61.111 11.35 0.96 40.97 3.02
174 175 3.324930 CCTCCCAGGCAGCACTGA 61.325 66.667 11.35 0.00 40.97 3.41
184 185 4.106925 GTGCTCCCAGCCTCCCAG 62.107 72.222 0.00 0.00 41.51 4.45
187 188 3.791586 GAGGTGCTCCCAGCCTCC 61.792 72.222 0.00 0.00 41.51 4.30
188 189 4.154347 CGAGGTGCTCCCAGCCTC 62.154 72.222 0.00 0.00 41.51 4.70
190 191 4.459089 GACGAGGTGCTCCCAGCC 62.459 72.222 0.00 0.00 41.51 4.85
191 192 4.459089 GGACGAGGTGCTCCCAGC 62.459 72.222 0.00 0.00 42.82 4.85
192 193 2.232298 GAAGGACGAGGTGCTCCCAG 62.232 65.000 0.00 0.00 31.83 4.45
193 194 2.203788 AAGGACGAGGTGCTCCCA 60.204 61.111 0.00 0.00 31.83 4.37
194 195 2.579738 GAAGGACGAGGTGCTCCC 59.420 66.667 0.00 0.00 31.83 4.30
195 196 2.579738 GGAAGGACGAGGTGCTCC 59.420 66.667 0.00 0.00 31.83 4.70
196 197 2.182030 CGGAAGGACGAGGTGCTC 59.818 66.667 0.00 0.00 31.83 4.26
197 198 2.600769 ACGGAAGGACGAGGTGCT 60.601 61.111 0.00 0.00 35.27 4.40
198 199 2.432628 CACGGAAGGACGAGGTGC 60.433 66.667 0.00 0.00 37.61 5.01
199 200 2.214181 CTCCACGGAAGGACGAGGTG 62.214 65.000 0.00 0.00 43.65 4.00
200 201 1.977544 CTCCACGGAAGGACGAGGT 60.978 63.158 0.00 0.00 43.65 3.85
201 202 1.658686 CTCTCCACGGAAGGACGAGG 61.659 65.000 0.00 0.00 44.40 4.63
202 203 0.961358 ACTCTCCACGGAAGGACGAG 60.961 60.000 0.00 13.40 38.15 4.18
203 204 1.074423 ACTCTCCACGGAAGGACGA 59.926 57.895 0.00 0.00 37.61 4.20
204 205 1.213013 CACTCTCCACGGAAGGACG 59.787 63.158 0.00 0.00 40.31 4.79
205 206 0.038159 CACACTCTCCACGGAAGGAC 60.038 60.000 0.00 0.00 33.19 3.85
206 207 1.816863 GCACACTCTCCACGGAAGGA 61.817 60.000 0.00 0.00 36.00 3.36
207 208 1.374758 GCACACTCTCCACGGAAGG 60.375 63.158 0.00 0.00 0.00 3.46
208 209 1.734477 CGCACACTCTCCACGGAAG 60.734 63.158 0.00 0.00 0.00 3.46
209 210 2.338620 CGCACACTCTCCACGGAA 59.661 61.111 0.00 0.00 0.00 4.30
210 211 2.910479 ACGCACACTCTCCACGGA 60.910 61.111 0.00 0.00 0.00 4.69
211 212 2.734723 CACGCACACTCTCCACGG 60.735 66.667 0.00 0.00 0.00 4.94
212 213 3.406361 GCACGCACACTCTCCACG 61.406 66.667 0.00 0.00 0.00 4.94
213 214 1.887242 TTGCACGCACACTCTCCAC 60.887 57.895 0.00 0.00 0.00 4.02
214 215 1.887242 GTTGCACGCACACTCTCCA 60.887 57.895 0.00 0.00 0.00 3.86
215 216 2.607892 GGTTGCACGCACACTCTCC 61.608 63.158 0.00 0.00 0.00 3.71
216 217 2.607892 GGGTTGCACGCACACTCTC 61.608 63.158 0.00 0.00 0.00 3.20
217 218 2.591715 GGGTTGCACGCACACTCT 60.592 61.111 0.00 0.00 0.00 3.24
218 219 4.012895 CGGGTTGCACGCACACTC 62.013 66.667 0.00 0.00 0.00 3.51
219 220 4.849310 ACGGGTTGCACGCACACT 62.849 61.111 0.00 0.00 34.00 3.55
220 221 4.605967 CACGGGTTGCACGCACAC 62.606 66.667 0.00 0.00 34.00 3.82
229 230 1.079127 CCCTACTCTGCACGGGTTG 60.079 63.158 0.00 0.00 31.89 3.77
230 231 3.388841 CCCTACTCTGCACGGGTT 58.611 61.111 0.00 0.00 31.89 4.11
231 232 2.119832 ACCCTACTCTGCACGGGT 59.880 61.111 0.00 0.00 44.90 5.28
232 233 0.460311 CTAACCCTACTCTGCACGGG 59.540 60.000 0.00 0.00 42.53 5.28
233 234 0.460311 CCTAACCCTACTCTGCACGG 59.540 60.000 0.00 0.00 0.00 4.94
234 235 1.183549 ACCTAACCCTACTCTGCACG 58.816 55.000 0.00 0.00 0.00 5.34
235 236 4.443034 CCAATACCTAACCCTACTCTGCAC 60.443 50.000 0.00 0.00 0.00 4.57
236 237 3.709653 CCAATACCTAACCCTACTCTGCA 59.290 47.826 0.00 0.00 0.00 4.41
237 238 3.071167 CCCAATACCTAACCCTACTCTGC 59.929 52.174 0.00 0.00 0.00 4.26
238 239 3.071167 GCCCAATACCTAACCCTACTCTG 59.929 52.174 0.00 0.00 0.00 3.35
239 240 3.315596 GCCCAATACCTAACCCTACTCT 58.684 50.000 0.00 0.00 0.00 3.24
240 241 2.371179 GGCCCAATACCTAACCCTACTC 59.629 54.545 0.00 0.00 0.00 2.59
241 242 2.415624 GGCCCAATACCTAACCCTACT 58.584 52.381 0.00 0.00 0.00 2.57
242 243 1.071228 CGGCCCAATACCTAACCCTAC 59.929 57.143 0.00 0.00 0.00 3.18
243 244 1.062275 TCGGCCCAATACCTAACCCTA 60.062 52.381 0.00 0.00 0.00 3.53
244 245 0.326808 TCGGCCCAATACCTAACCCT 60.327 55.000 0.00 0.00 0.00 4.34
245 246 0.108019 CTCGGCCCAATACCTAACCC 59.892 60.000 0.00 0.00 0.00 4.11
246 247 0.108019 CCTCGGCCCAATACCTAACC 59.892 60.000 0.00 0.00 0.00 2.85
247 248 0.534427 GCCTCGGCCCAATACCTAAC 60.534 60.000 0.00 0.00 34.56 2.34
248 249 0.693092 AGCCTCGGCCCAATACCTAA 60.693 55.000 3.92 0.00 43.17 2.69
249 250 1.074775 AGCCTCGGCCCAATACCTA 60.075 57.895 3.92 0.00 43.17 3.08
250 251 2.366972 AGCCTCGGCCCAATACCT 60.367 61.111 3.92 0.00 43.17 3.08
251 252 2.203209 CAGCCTCGGCCCAATACC 60.203 66.667 3.92 0.00 43.17 2.73
252 253 0.679960 AAACAGCCTCGGCCCAATAC 60.680 55.000 3.92 0.00 43.17 1.89
253 254 0.393808 GAAACAGCCTCGGCCCAATA 60.394 55.000 3.92 0.00 43.17 1.90
254 255 1.678970 GAAACAGCCTCGGCCCAAT 60.679 57.895 3.92 0.00 43.17 3.16
255 256 2.282180 GAAACAGCCTCGGCCCAA 60.282 61.111 3.92 0.00 43.17 4.12
256 257 3.249189 AGAAACAGCCTCGGCCCA 61.249 61.111 3.92 0.00 43.17 5.36
257 258 2.747855 CAGAAACAGCCTCGGCCC 60.748 66.667 3.92 0.00 43.17 5.80
258 259 2.747855 CCAGAAACAGCCTCGGCC 60.748 66.667 3.92 0.00 43.17 6.13
259 260 2.747855 CCCAGAAACAGCCTCGGC 60.748 66.667 0.00 0.00 42.33 5.54
260 261 2.747855 GCCCAGAAACAGCCTCGG 60.748 66.667 0.00 0.00 0.00 4.63
261 262 2.747855 GGCCCAGAAACAGCCTCG 60.748 66.667 0.00 0.00 43.62 4.63
266 267 2.463589 TACGGCTGGCCCAGAAACAG 62.464 60.000 16.85 0.00 32.44 3.16
267 268 1.847798 ATACGGCTGGCCCAGAAACA 61.848 55.000 16.85 0.00 32.44 2.83
268 269 1.077716 ATACGGCTGGCCCAGAAAC 60.078 57.895 16.85 2.45 32.44 2.78
269 270 1.223487 GATACGGCTGGCCCAGAAA 59.777 57.895 16.85 0.00 32.44 2.52
270 271 2.742116 GGATACGGCTGGCCCAGAA 61.742 63.158 16.85 0.00 32.44 3.02
271 272 3.161450 GGATACGGCTGGCCCAGA 61.161 66.667 16.85 0.00 32.44 3.86
272 273 4.256180 GGGATACGGCTGGCCCAG 62.256 72.222 6.32 6.32 40.39 4.45
274 275 3.352990 TTTGGGATACGGCTGGCCC 62.353 63.158 12.15 12.15 41.08 5.80
275 276 2.119029 GTTTGGGATACGGCTGGCC 61.119 63.158 0.00 0.00 37.60 5.36
276 277 0.679960 AAGTTTGGGATACGGCTGGC 60.680 55.000 0.00 0.00 37.60 4.85
277 278 1.094785 CAAGTTTGGGATACGGCTGG 58.905 55.000 0.00 0.00 37.60 4.85
278 279 1.737793 GACAAGTTTGGGATACGGCTG 59.262 52.381 0.00 0.00 37.60 4.85
279 280 1.349688 TGACAAGTTTGGGATACGGCT 59.650 47.619 0.00 0.00 37.60 5.52
280 281 1.467342 GTGACAAGTTTGGGATACGGC 59.533 52.381 0.00 0.00 37.60 5.68
281 282 1.730064 CGTGACAAGTTTGGGATACGG 59.270 52.381 0.00 0.00 37.60 4.02
282 283 2.409975 ACGTGACAAGTTTGGGATACG 58.590 47.619 0.00 0.00 36.48 3.06
283 284 3.365820 CGTACGTGACAAGTTTGGGATAC 59.634 47.826 7.22 0.00 0.00 2.24
284 285 3.005684 ACGTACGTGACAAGTTTGGGATA 59.994 43.478 22.14 0.00 0.00 2.59
285 286 2.224113 ACGTACGTGACAAGTTTGGGAT 60.224 45.455 22.14 0.00 0.00 3.85
286 287 1.136695 ACGTACGTGACAAGTTTGGGA 59.863 47.619 22.14 0.00 0.00 4.37
287 288 1.574134 ACGTACGTGACAAGTTTGGG 58.426 50.000 22.14 0.00 0.00 4.12
298 299 3.456744 ATACGGCAGGACACGTACGTG 62.457 57.143 39.06 39.06 46.66 4.49
299 300 1.308069 ATACGGCAGGACACGTACGT 61.308 55.000 16.72 16.72 46.66 3.57
300 301 0.590732 GATACGGCAGGACACGTACG 60.591 60.000 15.01 15.01 46.66 3.67
301 302 0.248784 GGATACGGCAGGACACGTAC 60.249 60.000 0.00 0.00 46.66 3.67
303 304 2.718073 GGGATACGGCAGGACACGT 61.718 63.158 0.00 0.00 46.17 4.49
304 305 2.106332 GGGATACGGCAGGACACG 59.894 66.667 0.00 0.00 37.60 4.49
305 306 1.144057 CAGGGATACGGCAGGACAC 59.856 63.158 0.00 0.00 37.60 3.67
306 307 2.731571 GCAGGGATACGGCAGGACA 61.732 63.158 0.00 0.00 37.49 4.02
307 308 2.109181 GCAGGGATACGGCAGGAC 59.891 66.667 0.00 0.00 37.49 3.85
308 309 2.364973 TGCAGGGATACGGCAGGA 60.365 61.111 0.00 0.00 41.80 3.86
342 343 6.070824 AGCAGTATCCCCGATTTTTGATTTTT 60.071 34.615 0.00 0.00 0.00 1.94
343 344 5.422012 AGCAGTATCCCCGATTTTTGATTTT 59.578 36.000 0.00 0.00 0.00 1.82
344 345 4.956075 AGCAGTATCCCCGATTTTTGATTT 59.044 37.500 0.00 0.00 0.00 2.17
345 346 4.536765 AGCAGTATCCCCGATTTTTGATT 58.463 39.130 0.00 0.00 0.00 2.57
346 347 4.137543 GAGCAGTATCCCCGATTTTTGAT 58.862 43.478 0.00 0.00 0.00 2.57
347 348 3.054728 TGAGCAGTATCCCCGATTTTTGA 60.055 43.478 0.00 0.00 0.00 2.69
348 349 3.278574 TGAGCAGTATCCCCGATTTTTG 58.721 45.455 0.00 0.00 0.00 2.44
349 350 3.054361 ACTGAGCAGTATCCCCGATTTTT 60.054 43.478 0.41 0.00 40.43 1.94
350 351 2.505819 ACTGAGCAGTATCCCCGATTTT 59.494 45.455 0.41 0.00 40.43 1.82
351 352 2.119495 ACTGAGCAGTATCCCCGATTT 58.881 47.619 0.41 0.00 40.43 2.17
352 353 1.794714 ACTGAGCAGTATCCCCGATT 58.205 50.000 0.41 0.00 40.43 3.34
353 354 1.689273 GAACTGAGCAGTATCCCCGAT 59.311 52.381 3.21 0.00 41.58 4.18
354 355 1.112113 GAACTGAGCAGTATCCCCGA 58.888 55.000 3.21 0.00 41.58 5.14
355 356 0.249073 CGAACTGAGCAGTATCCCCG 60.249 60.000 3.21 0.36 41.58 5.73
356 357 0.530870 GCGAACTGAGCAGTATCCCC 60.531 60.000 3.21 0.00 41.58 4.81
357 358 0.872021 CGCGAACTGAGCAGTATCCC 60.872 60.000 0.00 0.00 41.58 3.85
358 359 0.179134 ACGCGAACTGAGCAGTATCC 60.179 55.000 15.93 0.00 41.58 2.59
359 360 2.470196 TACGCGAACTGAGCAGTATC 57.530 50.000 15.93 3.72 41.58 2.24
360 361 2.287668 GGATACGCGAACTGAGCAGTAT 60.288 50.000 15.93 0.00 41.58 2.12
361 362 1.065102 GGATACGCGAACTGAGCAGTA 59.935 52.381 15.93 0.00 41.58 2.74
362 363 0.179134 GGATACGCGAACTGAGCAGT 60.179 55.000 15.93 0.00 44.94 4.40
363 364 0.101399 AGGATACGCGAACTGAGCAG 59.899 55.000 15.93 0.00 46.39 4.24
364 365 0.179137 CAGGATACGCGAACTGAGCA 60.179 55.000 15.93 0.00 46.39 4.26
365 366 1.483424 GCAGGATACGCGAACTGAGC 61.483 60.000 15.93 6.31 46.39 4.26
366 367 0.872021 GGCAGGATACGCGAACTGAG 60.872 60.000 15.93 0.00 46.39 3.35
367 368 1.141019 GGCAGGATACGCGAACTGA 59.859 57.895 15.93 0.00 46.39 3.41
368 369 2.230940 CGGCAGGATACGCGAACTG 61.231 63.158 15.93 15.75 46.39 3.16
369 370 1.378882 TACGGCAGGATACGCGAACT 61.379 55.000 15.93 1.35 46.39 3.01
370 371 0.318445 ATACGGCAGGATACGCGAAC 60.318 55.000 15.93 2.91 46.39 3.95
371 372 0.039798 GATACGGCAGGATACGCGAA 60.040 55.000 15.93 0.00 46.39 4.70
372 373 1.577922 GATACGGCAGGATACGCGA 59.422 57.895 15.93 0.00 46.39 5.87
373 374 1.443872 GGATACGGCAGGATACGCG 60.444 63.158 3.53 3.53 46.39 6.01
374 375 1.080025 GGGATACGGCAGGATACGC 60.080 63.158 0.00 0.00 39.41 4.42
375 376 1.211969 CGGGATACGGCAGGATACG 59.788 63.158 0.00 0.00 40.00 3.06
384 385 4.580551 GGACACGGCGGGATACGG 62.581 72.222 19.75 0.00 44.51 4.02
386 387 3.152400 AGGGACACGGCGGGATAC 61.152 66.667 19.75 6.68 0.00 2.24
387 388 2.570774 TACAGGGACACGGCGGGATA 62.571 60.000 19.75 0.00 0.00 2.59
388 389 3.968837 TACAGGGACACGGCGGGAT 62.969 63.158 19.75 0.00 0.00 3.85
389 390 3.968837 ATACAGGGACACGGCGGGA 62.969 63.158 19.75 0.00 0.00 5.14
390 391 3.441011 GATACAGGGACACGGCGGG 62.441 68.421 8.04 8.04 0.00 6.13
391 392 2.106332 GATACAGGGACACGGCGG 59.894 66.667 13.24 2.35 0.00 6.13
392 393 2.106332 GGATACAGGGACACGGCG 59.894 66.667 4.80 4.80 0.00 6.46
393 394 1.144057 CAGGATACAGGGACACGGC 59.856 63.158 0.00 0.00 41.41 5.68
394 395 1.144057 GCAGGATACAGGGACACGG 59.856 63.158 0.00 0.00 41.41 4.94
395 396 1.144057 GGCAGGATACAGGGACACG 59.856 63.158 0.00 0.00 41.41 4.49
396 397 1.144057 CGGCAGGATACAGGGACAC 59.856 63.158 0.00 0.00 41.41 3.67
397 398 0.032912 TACGGCAGGATACAGGGACA 60.033 55.000 0.00 0.00 41.41 4.02
398 399 1.272769 GATACGGCAGGATACAGGGAC 59.727 57.143 0.00 0.00 41.41 4.46
399 400 1.133294 TGATACGGCAGGATACAGGGA 60.133 52.381 0.00 0.00 41.41 4.20
400 401 1.273606 CTGATACGGCAGGATACAGGG 59.726 57.143 0.00 0.00 41.41 4.45
401 402 2.239400 TCTGATACGGCAGGATACAGG 58.761 52.381 8.04 0.00 36.55 4.00
402 403 3.643763 GTTCTGATACGGCAGGATACAG 58.356 50.000 0.00 0.00 36.55 2.74
403 404 2.034179 CGTTCTGATACGGCAGGATACA 59.966 50.000 0.00 0.00 37.86 2.29
404 405 2.662700 CGTTCTGATACGGCAGGATAC 58.337 52.381 0.00 0.00 37.86 2.24
406 407 3.967886 CGTTCTGATACGGCAGGAT 57.032 52.632 0.00 0.00 37.86 3.24
413 414 1.399572 CGATCTGCCGTTCTGATACG 58.600 55.000 0.00 5.72 41.06 3.06
414 415 1.772182 CCGATCTGCCGTTCTGATAC 58.228 55.000 0.00 0.00 34.10 2.24
415 416 0.032130 GCCGATCTGCCGTTCTGATA 59.968 55.000 0.00 0.00 34.10 2.15
416 417 1.227380 GCCGATCTGCCGTTCTGAT 60.227 57.895 0.00 0.00 36.27 2.90
417 418 2.184322 GCCGATCTGCCGTTCTGA 59.816 61.111 0.00 0.00 0.00 3.27
418 419 2.125552 TGCCGATCTGCCGTTCTG 60.126 61.111 6.66 0.00 0.00 3.02
419 420 2.172483 AACTGCCGATCTGCCGTTCT 62.172 55.000 12.04 0.00 34.15 3.01
420 421 1.298859 AAACTGCCGATCTGCCGTTC 61.299 55.000 16.80 0.00 37.64 3.95
421 422 1.298859 GAAACTGCCGATCTGCCGTT 61.299 55.000 12.04 12.04 39.86 4.44
422 423 1.741770 GAAACTGCCGATCTGCCGT 60.742 57.895 6.66 3.43 0.00 5.68
423 424 1.448540 AGAAACTGCCGATCTGCCG 60.449 57.895 6.66 2.74 0.00 5.69
424 425 2.093216 CAGAAACTGCCGATCTGCC 58.907 57.895 6.66 0.00 34.72 4.85
434 435 1.594293 ACGGACACGGCAGAAACTG 60.594 57.895 0.00 0.00 46.48 3.16
435 436 1.594293 CACGGACACGGCAGAAACT 60.594 57.895 0.00 0.00 46.48 2.66
436 437 2.935955 CACGGACACGGCAGAAAC 59.064 61.111 0.00 0.00 46.48 2.78
437 438 2.933878 AAGCACGGACACGGCAGAAA 62.934 55.000 0.00 0.00 46.48 2.52
438 439 2.933878 AAAGCACGGACACGGCAGAA 62.934 55.000 0.00 0.00 46.48 3.02
439 440 3.454587 AAAGCACGGACACGGCAGA 62.455 57.895 0.00 0.00 46.48 4.26
440 441 2.972505 AAAGCACGGACACGGCAG 60.973 61.111 0.00 0.00 46.48 4.85
441 442 2.646117 TACAAAGCACGGACACGGCA 62.646 55.000 0.00 0.00 46.48 5.69
442 443 1.897398 CTACAAAGCACGGACACGGC 61.897 60.000 0.00 0.00 46.48 5.68
443 444 1.289109 CCTACAAAGCACGGACACGG 61.289 60.000 0.00 0.00 46.48 4.94
445 446 0.034337 TCCCTACAAAGCACGGACAC 59.966 55.000 0.00 0.00 0.00 3.67
446 447 0.320374 CTCCCTACAAAGCACGGACA 59.680 55.000 0.00 0.00 0.00 4.02
447 448 0.391263 CCTCCCTACAAAGCACGGAC 60.391 60.000 0.00 0.00 0.00 4.79
448 449 0.834687 ACCTCCCTACAAAGCACGGA 60.835 55.000 0.00 0.00 0.00 4.69
449 450 0.673644 CACCTCCCTACAAAGCACGG 60.674 60.000 0.00 0.00 0.00 4.94
450 451 1.298859 GCACCTCCCTACAAAGCACG 61.299 60.000 0.00 0.00 0.00 5.34
451 452 0.036875 AGCACCTCCCTACAAAGCAC 59.963 55.000 0.00 0.00 0.00 4.40
452 453 0.771127 AAGCACCTCCCTACAAAGCA 59.229 50.000 0.00 0.00 0.00 3.91
453 454 1.003696 AGAAGCACCTCCCTACAAAGC 59.996 52.381 0.00 0.00 0.00 3.51
454 455 3.077359 CAAGAAGCACCTCCCTACAAAG 58.923 50.000 0.00 0.00 0.00 2.77
455 456 2.814097 GCAAGAAGCACCTCCCTACAAA 60.814 50.000 0.00 0.00 44.79 2.83
456 457 1.271379 GCAAGAAGCACCTCCCTACAA 60.271 52.381 0.00 0.00 44.79 2.41
457 458 0.324943 GCAAGAAGCACCTCCCTACA 59.675 55.000 0.00 0.00 44.79 2.74
458 459 3.160872 GCAAGAAGCACCTCCCTAC 57.839 57.895 0.00 0.00 44.79 3.18
506 507 4.383118 CCACATCTTTCCATTACGAGGAGT 60.383 45.833 0.00 0.00 36.33 3.85
679 691 7.604657 TTAACACCATTGGGACTGTAAAATT 57.395 32.000 7.78 0.00 38.05 1.82
723 1140 9.626045 ACAAAAGATTAATTAGCTAAACAGCAC 57.374 29.630 10.85 1.56 37.25 4.40
814 1250 6.789959 ACAAGGTAAATGGGATAGAGCTATCT 59.210 38.462 15.06 0.88 41.20 1.98
887 1323 6.986817 AGACATTAGCTACATATTGGTGTGTC 59.013 38.462 0.00 0.00 34.27 3.67
1137 1598 2.497675 GGATCAACACTCAGCTCCAGTA 59.502 50.000 0.00 0.00 0.00 2.74
1145 1606 2.756840 TCTGCAGGATCAACACTCAG 57.243 50.000 15.13 0.00 0.00 3.35
1232 1697 4.070716 CTCAAAGTGCCCATGATAGATCC 58.929 47.826 0.00 0.00 0.00 3.36
1327 3285 1.069636 GCAGAAGACGTGAAAAGCCTG 60.070 52.381 0.00 0.00 0.00 4.85
1465 3423 3.318839 CCATGGCATGTGAATACGGAAAT 59.681 43.478 24.80 0.00 0.00 2.17
1470 3428 1.265095 GAGCCATGGCATGTGAATACG 59.735 52.381 37.18 9.67 44.88 3.06
1668 3663 2.659428 ACAGAAAAGCCAAGAAGTGCT 58.341 42.857 0.00 0.00 40.17 4.40
1749 3744 5.296283 CAGTCAGCAGAGCAGCTTTATATTT 59.704 40.000 0.00 0.00 43.70 1.40
1803 3800 4.167113 AGGTATCTTCTCCTAGACAGAGCA 59.833 45.833 0.00 0.00 31.66 4.26
1909 3918 1.004394 AGAATCAGACCGGGAAAACCC 59.996 52.381 6.32 0.00 34.99 4.11
2498 4524 7.112122 TCATCATTAGCAGATACACCAGTTTT 58.888 34.615 0.00 0.00 0.00 2.43
2540 4647 3.513119 TGTGATCTTGACCTGGAAGAGAG 59.487 47.826 0.00 0.00 34.07 3.20
2541 4648 3.510459 TGTGATCTTGACCTGGAAGAGA 58.490 45.455 0.00 0.21 34.07 3.10
2542 4649 3.369261 CCTGTGATCTTGACCTGGAAGAG 60.369 52.174 0.00 0.00 34.07 2.85
2543 4650 2.568956 CCTGTGATCTTGACCTGGAAGA 59.431 50.000 0.00 0.00 34.07 2.87
2544 4651 2.355513 CCCTGTGATCTTGACCTGGAAG 60.356 54.545 0.00 0.00 0.00 3.46
2545 4652 1.630369 CCCTGTGATCTTGACCTGGAA 59.370 52.381 0.00 0.00 0.00 3.53
2546 4653 1.279496 CCCTGTGATCTTGACCTGGA 58.721 55.000 0.00 0.00 0.00 3.86
2547 4654 0.987294 ACCCTGTGATCTTGACCTGG 59.013 55.000 0.00 0.00 0.00 4.45
2548 4655 2.224621 ACAACCCTGTGATCTTGACCTG 60.225 50.000 0.00 0.00 33.30 4.00
2549 4656 2.039084 GACAACCCTGTGATCTTGACCT 59.961 50.000 0.00 0.00 35.30 3.85
2550 4657 2.427506 GACAACCCTGTGATCTTGACC 58.572 52.381 0.00 0.00 35.30 4.02
2551 4658 2.039084 AGGACAACCCTGTGATCTTGAC 59.961 50.000 0.00 0.00 45.61 3.18
2552 4659 2.338809 AGGACAACCCTGTGATCTTGA 58.661 47.619 0.00 0.00 45.61 3.02
2553 4660 2.867109 AGGACAACCCTGTGATCTTG 57.133 50.000 0.00 0.00 45.61 3.02
2563 4670 1.694696 AGAGAGAACACAGGACAACCC 59.305 52.381 0.00 0.00 36.73 4.11
2564 4671 3.394719 GAAGAGAGAACACAGGACAACC 58.605 50.000 0.00 0.00 0.00 3.77
2565 4672 3.181465 TGGAAGAGAGAACACAGGACAAC 60.181 47.826 0.00 0.00 0.00 3.32
2566 4673 3.038280 TGGAAGAGAGAACACAGGACAA 58.962 45.455 0.00 0.00 0.00 3.18
2567 4674 2.630098 CTGGAAGAGAGAACACAGGACA 59.370 50.000 0.00 0.00 34.07 4.02
2568 4675 2.028567 CCTGGAAGAGAGAACACAGGAC 60.029 54.545 0.00 0.00 46.38 3.85
2569 4676 2.251818 CCTGGAAGAGAGAACACAGGA 58.748 52.381 0.00 0.00 46.38 3.86
2570 4677 2.758736 CCTGGAAGAGAGAACACAGG 57.241 55.000 0.00 0.00 39.45 4.00
2571 4678 2.630098 TGACCTGGAAGAGAGAACACAG 59.370 50.000 0.00 0.00 34.07 3.66
2572 4679 2.677914 TGACCTGGAAGAGAGAACACA 58.322 47.619 0.00 0.00 34.07 3.72
2573 4680 3.322254 TCTTGACCTGGAAGAGAGAACAC 59.678 47.826 0.00 0.00 34.07 3.32
2574 4681 3.576861 TCTTGACCTGGAAGAGAGAACA 58.423 45.455 0.00 0.00 34.07 3.18
2575 4682 4.221703 TGATCTTGACCTGGAAGAGAGAAC 59.778 45.833 0.00 0.00 34.07 3.01
2576 4683 4.420206 TGATCTTGACCTGGAAGAGAGAA 58.580 43.478 0.00 0.00 34.07 2.87
2577 4684 4.022603 CTGATCTTGACCTGGAAGAGAGA 58.977 47.826 0.00 0.00 34.07 3.10
2679 4786 1.197430 ACCAGGAAGAGACCAGGCAG 61.197 60.000 0.00 0.00 39.73 4.85
2793 4900 1.270550 CCCAAACCTCATGTCAGTTGC 59.729 52.381 0.00 0.00 0.00 4.17
2983 5210 1.003718 CCAGGACAACTCCGTTCCC 60.004 63.158 0.00 0.00 42.22 3.97
3093 5332 1.067635 ACCAAAATGCGGAAGATGCAC 60.068 47.619 0.00 0.00 46.57 4.57
3141 5380 1.004745 GTGGCCAGGAAGAAAGGATGA 59.995 52.381 5.11 0.00 0.00 2.92
3483 5762 8.204160 TCTAACATCGATGAGGTAAACATTGAT 58.796 33.333 31.33 0.77 44.68 2.57
3687 5966 7.253420 GCGCTAAACATAACATCAACATTTCTG 60.253 37.037 0.00 0.00 0.00 3.02
3802 6081 3.181514 CCTTGGTTGCCGTTTCTATTACG 60.182 47.826 0.00 0.00 38.67 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.