Multiple sequence alignment - TraesCS1B01G011300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G011300 chr1B 100.000 2750 0 0 1 2750 5174520 5177269 0.000000e+00 5079.0
1 TraesCS1B01G011300 chr1B 96.335 191 7 0 1 191 5162664 5162854 5.720000e-82 315.0
2 TraesCS1B01G011300 chr1B 77.973 513 69 31 597 1079 5160372 5160870 5.800000e-72 281.0
3 TraesCS1B01G011300 chr1B 94.643 56 2 1 200 254 309380235 309380180 4.880000e-13 86.1
4 TraesCS1B01G011300 chr1B 89.394 66 4 3 192 255 112196499 112196435 2.270000e-11 80.5
5 TraesCS1B01G011300 chr1D 92.221 1337 73 18 597 1916 210681 209359 0.000000e+00 1864.0
6 TraesCS1B01G011300 chr1D 86.477 599 37 12 2173 2750 209361 208786 3.890000e-173 617.0
7 TraesCS1B01G011300 chr1D 84.674 261 38 1 324 582 210926 210666 2.720000e-65 259.0
8 TraesCS1B01G011300 chr1A 91.673 1333 79 18 596 1916 4052753 4054065 0.000000e+00 1818.0
9 TraesCS1B01G011300 chr1A 86.970 330 28 7 254 579 4052448 4052766 9.370000e-95 357.0
10 TraesCS1B01G011300 chr1A 91.617 167 13 1 2584 2750 4054445 4054610 2.130000e-56 230.0
11 TraesCS1B01G011300 chr1A 89.143 175 9 2 2173 2339 4054063 4054235 2.780000e-50 209.0
12 TraesCS1B01G011300 chr1A 90.323 62 5 1 196 256 540894587 540894648 2.270000e-11 80.5
13 TraesCS1B01G011300 chr4D 90.421 261 25 0 1915 2175 145579767 145579507 7.290000e-91 344.0
14 TraesCS1B01G011300 chr4D 88.519 270 27 3 1908 2176 9306109 9306375 9.500000e-85 324.0
15 TraesCS1B01G011300 chr4D 89.552 67 7 0 192 258 339233789 339233855 4.880000e-13 86.1
16 TraesCS1B01G011300 chr6D 90.347 259 25 0 1915 2173 348087860 348087602 9.430000e-90 340.0
17 TraesCS1B01G011300 chr6D 88.550 262 28 1 1914 2175 408691763 408691504 1.590000e-82 316.0
18 TraesCS1B01G011300 chr6D 90.217 92 9 0 2341 2432 20553752 20553661 1.340000e-23 121.0
19 TraesCS1B01G011300 chr6D 93.443 61 3 1 192 251 6342511 6342571 3.770000e-14 89.8
20 TraesCS1B01G011300 chr7D 89.655 261 27 0 1915 2175 363048663 363048923 1.580000e-87 333.0
21 TraesCS1B01G011300 chr7D 92.771 83 6 0 2342 2424 610532155 610532073 1.340000e-23 121.0
22 TraesCS1B01G011300 chr5A 90.947 243 22 0 1915 2157 640393798 640393556 7.340000e-86 327.0
23 TraesCS1B01G011300 chr5A 88.679 265 28 2 1913 2176 83022823 83023086 3.420000e-84 322.0
24 TraesCS1B01G011300 chr7B 96.354 192 7 0 1 192 349477641 349477832 1.590000e-82 316.0
25 TraesCS1B01G011300 chr7B 95.288 191 8 1 1 191 349452205 349452394 4.450000e-78 302.0
26 TraesCS1B01G011300 chr5B 87.591 274 33 1 1913 2186 447183500 447183228 1.590000e-82 316.0
27 TraesCS1B01G011300 chr5B 95.812 191 8 0 1 191 18878805 18878995 2.660000e-80 309.0
28 TraesCS1B01G011300 chr5B 96.216 185 7 0 1 185 428775397 428775581 1.240000e-78 303.0
29 TraesCS1B01G011300 chr4A 88.550 262 28 2 1915 2175 321329340 321329080 1.590000e-82 316.0
30 TraesCS1B01G011300 chr2B 94.030 201 12 0 1 201 324062525 324062325 3.440000e-79 305.0
31 TraesCS1B01G011300 chr4B 94.845 194 10 0 1 194 492455983 492455790 1.240000e-78 303.0
32 TraesCS1B01G011300 chr4B 92.045 88 7 0 2341 2428 4233600 4233513 1.030000e-24 124.0
33 TraesCS1B01G011300 chr3B 95.288 191 9 0 1 191 336696688 336696878 1.240000e-78 303.0
34 TraesCS1B01G011300 chr3B 95.288 191 9 0 1 191 336704074 336704264 1.240000e-78 303.0
35 TraesCS1B01G011300 chrUn 81.173 324 56 5 606 927 94280114 94280434 3.510000e-64 255.0
36 TraesCS1B01G011300 chrUn 79.573 328 55 11 606 928 94590884 94591204 9.910000e-55 224.0
37 TraesCS1B01G011300 chr6B 83.333 228 31 7 606 830 43474658 43474881 1.290000e-48 204.0
38 TraesCS1B01G011300 chr6B 82.456 228 31 8 606 830 43383952 43384173 1.010000e-44 191.0
39 TraesCS1B01G011300 chr6B 82.456 228 31 8 606 830 43436028 43436249 1.010000e-44 191.0
40 TraesCS1B01G011300 chr6B 92.391 92 7 0 2334 2425 359864725 359864634 6.180000e-27 132.0
41 TraesCS1B01G011300 chr6B 92.941 85 6 0 2341 2425 646750142 646750058 1.030000e-24 124.0
42 TraesCS1B01G011300 chr6B 88.119 101 10 2 2324 2424 512256521 512256619 4.810000e-23 119.0
43 TraesCS1B01G011300 chr2D 92.045 88 7 0 2337 2424 589522340 589522253 1.030000e-24 124.0
44 TraesCS1B01G011300 chr2D 90.323 93 9 0 2333 2425 300888179 300888271 3.720000e-24 122.0
45 TraesCS1B01G011300 chr2A 92.857 84 4 2 2341 2424 654910321 654910240 1.340000e-23 121.0
46 TraesCS1B01G011300 chr7A 94.737 57 2 1 196 251 369838816 369838760 1.360000e-13 87.9
47 TraesCS1B01G011300 chr7A 100.000 31 0 0 2146 2176 73131869 73131899 1.060000e-04 58.4
48 TraesCS1B01G011300 chr6A 94.737 57 2 1 196 251 217063154 217063098 1.360000e-13 87.9
49 TraesCS1B01G011300 chr3D 91.803 61 3 2 196 254 344558127 344558187 1.750000e-12 84.2
50 TraesCS1B01G011300 chr3A 93.103 58 2 2 196 251 63727270 63727327 1.750000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G011300 chr1B 5174520 5177269 2749 False 5079.000000 5079 100.000000 1 2750 1 chr1B.!!$F1 2749
1 TraesCS1B01G011300 chr1B 5160372 5162854 2482 False 298.000000 315 87.154000 1 1079 2 chr1B.!!$F2 1078
2 TraesCS1B01G011300 chr1D 208786 210926 2140 True 913.333333 1864 87.790667 324 2750 3 chr1D.!!$R1 2426
3 TraesCS1B01G011300 chr1A 4052448 4054610 2162 False 653.500000 1818 89.850750 254 2750 4 chr1A.!!$F2 2496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
106 107 0.035820 TTTCCCCGTGATTTCCCTCG 60.036 55.0 0.00 0.00 0.0 4.63 F
174 175 0.106894 GTGAAAGATCGGCCCCTAGG 59.893 60.0 0.06 0.06 0.0 3.02 F
1514 1752 0.179113 CCAGCCACAACACCAACAAC 60.179 55.0 0.00 0.00 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1288 1523 0.037303 AGCTGCTATGTTGCACCACT 59.963 50.0 0.00 0.0 38.12 4.00 R
1522 1760 0.038166 TCCAACCCTGATCCAGTTGC 59.962 55.0 11.96 0.0 39.61 4.17 R
2690 3460 0.779997 AGGACAGCAGGGAAAATGGT 59.220 50.0 0.00 0.0 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.992943 TTGGATTTGGACCGTGTATCT 57.007 42.857 0.00 0.00 0.00 1.98
21 22 3.536956 TGGATTTGGACCGTGTATCTC 57.463 47.619 0.00 0.00 0.00 2.75
22 23 3.104512 TGGATTTGGACCGTGTATCTCT 58.895 45.455 0.00 0.00 0.00 3.10
23 24 3.517901 TGGATTTGGACCGTGTATCTCTT 59.482 43.478 0.00 0.00 0.00 2.85
24 25 4.019681 TGGATTTGGACCGTGTATCTCTTT 60.020 41.667 0.00 0.00 0.00 2.52
25 26 4.332819 GGATTTGGACCGTGTATCTCTTTG 59.667 45.833 0.00 0.00 0.00 2.77
26 27 4.345859 TTTGGACCGTGTATCTCTTTGT 57.654 40.909 0.00 0.00 0.00 2.83
27 28 3.313012 TGGACCGTGTATCTCTTTGTG 57.687 47.619 0.00 0.00 0.00 3.33
28 29 2.631062 TGGACCGTGTATCTCTTTGTGT 59.369 45.455 0.00 0.00 0.00 3.72
29 30 3.070446 TGGACCGTGTATCTCTTTGTGTT 59.930 43.478 0.00 0.00 0.00 3.32
30 31 3.678548 GGACCGTGTATCTCTTTGTGTTC 59.321 47.826 0.00 0.00 0.00 3.18
31 32 3.660865 ACCGTGTATCTCTTTGTGTTCC 58.339 45.455 0.00 0.00 0.00 3.62
32 33 3.323979 ACCGTGTATCTCTTTGTGTTCCT 59.676 43.478 0.00 0.00 0.00 3.36
33 34 4.202326 ACCGTGTATCTCTTTGTGTTCCTT 60.202 41.667 0.00 0.00 0.00 3.36
34 35 4.152402 CCGTGTATCTCTTTGTGTTCCTTG 59.848 45.833 0.00 0.00 0.00 3.61
35 36 4.152402 CGTGTATCTCTTTGTGTTCCTTGG 59.848 45.833 0.00 0.00 0.00 3.61
36 37 5.305585 GTGTATCTCTTTGTGTTCCTTGGA 58.694 41.667 0.00 0.00 0.00 3.53
37 38 5.940470 GTGTATCTCTTTGTGTTCCTTGGAT 59.060 40.000 0.00 0.00 0.00 3.41
38 39 6.092807 GTGTATCTCTTTGTGTTCCTTGGATC 59.907 42.308 0.00 0.00 0.00 3.36
39 40 4.982241 TCTCTTTGTGTTCCTTGGATCT 57.018 40.909 0.00 0.00 0.00 2.75
40 41 6.627087 ATCTCTTTGTGTTCCTTGGATCTA 57.373 37.500 0.00 0.00 0.00 1.98
41 42 6.433847 TCTCTTTGTGTTCCTTGGATCTAA 57.566 37.500 0.00 0.00 0.00 2.10
42 43 6.231211 TCTCTTTGTGTTCCTTGGATCTAAC 58.769 40.000 0.00 0.00 0.00 2.34
43 44 5.935945 TCTTTGTGTTCCTTGGATCTAACA 58.064 37.500 0.00 0.00 0.00 2.41
47 48 5.551760 GTGTTCCTTGGATCTAACACATG 57.448 43.478 14.13 0.00 46.87 3.21
48 49 5.003804 GTGTTCCTTGGATCTAACACATGT 58.996 41.667 14.13 0.00 46.87 3.21
49 50 5.003160 TGTTCCTTGGATCTAACACATGTG 58.997 41.667 24.25 24.25 0.00 3.21
50 51 7.462844 GTGTTCCTTGGATCTAACACATGTGT 61.463 42.308 25.76 25.76 46.87 3.72
51 52 9.372699 GTGTTCCTTGGATCTAACACATGTGTG 62.373 44.444 31.17 19.70 46.87 3.82
67 68 7.034685 ACATGTGTGATCATATTCATGTTGG 57.965 36.000 17.55 1.72 41.60 3.77
68 69 6.604396 ACATGTGTGATCATATTCATGTTGGT 59.396 34.615 17.55 2.24 41.60 3.67
69 70 7.123098 ACATGTGTGATCATATTCATGTTGGTT 59.877 33.333 17.55 1.97 41.60 3.67
70 71 6.854778 TGTGTGATCATATTCATGTTGGTTG 58.145 36.000 0.00 0.00 33.57 3.77
71 72 6.658391 TGTGTGATCATATTCATGTTGGTTGA 59.342 34.615 0.00 0.00 33.57 3.18
72 73 7.148205 TGTGTGATCATATTCATGTTGGTTGAG 60.148 37.037 0.00 0.00 33.57 3.02
73 74 6.885918 TGTGATCATATTCATGTTGGTTGAGT 59.114 34.615 0.00 0.00 33.57 3.41
74 75 8.046107 TGTGATCATATTCATGTTGGTTGAGTA 58.954 33.333 0.00 0.00 33.57 2.59
75 76 9.060347 GTGATCATATTCATGTTGGTTGAGTAT 57.940 33.333 0.00 0.00 33.57 2.12
76 77 9.631257 TGATCATATTCATGTTGGTTGAGTATT 57.369 29.630 0.00 0.00 33.57 1.89
82 83 8.641498 ATTCATGTTGGTTGAGTATTTTCTCT 57.359 30.769 0.00 0.00 35.68 3.10
83 84 8.463930 TTCATGTTGGTTGAGTATTTTCTCTT 57.536 30.769 0.00 0.00 35.68 2.85
84 85 7.874940 TCATGTTGGTTGAGTATTTTCTCTTG 58.125 34.615 0.00 0.00 35.68 3.02
85 86 6.072112 TGTTGGTTGAGTATTTTCTCTTGC 57.928 37.500 0.00 0.00 35.68 4.01
86 87 5.147162 GTTGGTTGAGTATTTTCTCTTGCG 58.853 41.667 0.00 0.00 35.68 4.85
87 88 4.385825 TGGTTGAGTATTTTCTCTTGCGT 58.614 39.130 0.00 0.00 35.68 5.24
88 89 4.819630 TGGTTGAGTATTTTCTCTTGCGTT 59.180 37.500 0.00 0.00 35.68 4.84
89 90 5.298276 TGGTTGAGTATTTTCTCTTGCGTTT 59.702 36.000 0.00 0.00 35.68 3.60
90 91 5.851703 GGTTGAGTATTTTCTCTTGCGTTTC 59.148 40.000 0.00 0.00 35.68 2.78
91 92 5.607119 TGAGTATTTTCTCTTGCGTTTCC 57.393 39.130 0.00 0.00 35.68 3.13
92 93 4.454504 TGAGTATTTTCTCTTGCGTTTCCC 59.545 41.667 0.00 0.00 35.68 3.97
93 94 3.756963 AGTATTTTCTCTTGCGTTTCCCC 59.243 43.478 0.00 0.00 0.00 4.81
94 95 0.948678 TTTTCTCTTGCGTTTCCCCG 59.051 50.000 0.00 0.00 0.00 5.73
95 96 0.179040 TTTCTCTTGCGTTTCCCCGT 60.179 50.000 0.00 0.00 0.00 5.28
96 97 0.882927 TTCTCTTGCGTTTCCCCGTG 60.883 55.000 0.00 0.00 0.00 4.94
97 98 1.301401 CTCTTGCGTTTCCCCGTGA 60.301 57.895 0.00 0.00 0.00 4.35
98 99 0.673644 CTCTTGCGTTTCCCCGTGAT 60.674 55.000 0.00 0.00 0.00 3.06
99 100 0.250553 TCTTGCGTTTCCCCGTGATT 60.251 50.000 0.00 0.00 0.00 2.57
100 101 0.596082 CTTGCGTTTCCCCGTGATTT 59.404 50.000 0.00 0.00 0.00 2.17
101 102 0.594110 TTGCGTTTCCCCGTGATTTC 59.406 50.000 0.00 0.00 0.00 2.17
102 103 1.238625 TGCGTTTCCCCGTGATTTCC 61.239 55.000 0.00 0.00 0.00 3.13
103 104 1.929806 GCGTTTCCCCGTGATTTCCC 61.930 60.000 0.00 0.00 0.00 3.97
104 105 0.322187 CGTTTCCCCGTGATTTCCCT 60.322 55.000 0.00 0.00 0.00 4.20
105 106 1.460504 GTTTCCCCGTGATTTCCCTC 58.539 55.000 0.00 0.00 0.00 4.30
106 107 0.035820 TTTCCCCGTGATTTCCCTCG 60.036 55.000 0.00 0.00 0.00 4.63
107 108 1.196104 TTCCCCGTGATTTCCCTCGT 61.196 55.000 0.00 0.00 0.00 4.18
108 109 1.196104 TCCCCGTGATTTCCCTCGTT 61.196 55.000 0.00 0.00 0.00 3.85
109 110 0.743345 CCCCGTGATTTCCCTCGTTC 60.743 60.000 0.00 0.00 0.00 3.95
110 111 0.743345 CCCGTGATTTCCCTCGTTCC 60.743 60.000 0.00 0.00 0.00 3.62
111 112 0.743345 CCGTGATTTCCCTCGTTCCC 60.743 60.000 0.00 0.00 0.00 3.97
112 113 0.743345 CGTGATTTCCCTCGTTCCCC 60.743 60.000 0.00 0.00 0.00 4.81
113 114 0.618981 GTGATTTCCCTCGTTCCCCT 59.381 55.000 0.00 0.00 0.00 4.79
114 115 0.909623 TGATTTCCCTCGTTCCCCTC 59.090 55.000 0.00 0.00 0.00 4.30
115 116 0.180642 GATTTCCCTCGTTCCCCTCC 59.819 60.000 0.00 0.00 0.00 4.30
116 117 1.623542 ATTTCCCTCGTTCCCCTCCG 61.624 60.000 0.00 0.00 0.00 4.63
134 135 3.932289 CGCGTTCTTCGTGTTCCT 58.068 55.556 0.00 0.00 43.87 3.36
135 136 1.773496 CGCGTTCTTCGTGTTCCTC 59.227 57.895 0.00 0.00 43.87 3.71
136 137 1.773496 GCGTTCTTCGTGTTCCTCG 59.227 57.895 0.00 0.00 42.13 4.63
137 138 0.938168 GCGTTCTTCGTGTTCCTCGT 60.938 55.000 0.00 0.00 42.13 4.18
138 139 1.664016 GCGTTCTTCGTGTTCCTCGTA 60.664 52.381 0.00 0.00 42.13 3.43
139 140 2.240040 CGTTCTTCGTGTTCCTCGTAG 58.760 52.381 0.00 0.00 34.52 3.51
140 141 2.593257 GTTCTTCGTGTTCCTCGTAGG 58.407 52.381 0.00 0.00 36.46 3.18
141 142 1.171308 TCTTCGTGTTCCTCGTAGGG 58.829 55.000 1.76 0.00 35.59 3.53
142 143 1.171308 CTTCGTGTTCCTCGTAGGGA 58.829 55.000 1.76 0.00 35.59 4.20
143 144 1.749634 CTTCGTGTTCCTCGTAGGGAT 59.250 52.381 1.76 0.00 35.59 3.85
144 145 1.386533 TCGTGTTCCTCGTAGGGATC 58.613 55.000 1.76 0.00 35.59 3.36
145 146 0.384669 CGTGTTCCTCGTAGGGATCC 59.615 60.000 1.92 1.92 35.59 3.36
146 147 1.777941 GTGTTCCTCGTAGGGATCCT 58.222 55.000 12.58 0.00 35.59 3.24
147 148 1.682323 GTGTTCCTCGTAGGGATCCTC 59.318 57.143 12.58 1.55 35.59 3.71
148 149 1.569548 TGTTCCTCGTAGGGATCCTCT 59.430 52.381 12.58 9.74 35.59 3.69
149 150 2.232399 GTTCCTCGTAGGGATCCTCTC 58.768 57.143 12.58 1.26 35.59 3.20
150 151 0.772384 TCCTCGTAGGGATCCTCTCC 59.228 60.000 12.58 0.00 44.11 3.71
151 152 0.478942 CCTCGTAGGGATCCTCTCCA 59.521 60.000 12.58 0.00 46.98 3.86
152 153 1.133450 CCTCGTAGGGATCCTCTCCAA 60.133 57.143 12.58 0.00 46.98 3.53
153 154 2.667470 CTCGTAGGGATCCTCTCCAAA 58.333 52.381 12.58 0.00 46.98 3.28
154 155 2.362717 CTCGTAGGGATCCTCTCCAAAC 59.637 54.545 12.58 1.80 46.98 2.93
155 156 1.067212 CGTAGGGATCCTCTCCAAACG 59.933 57.143 12.58 9.73 46.98 3.60
156 157 2.108970 GTAGGGATCCTCTCCAAACGT 58.891 52.381 12.58 0.00 46.98 3.99
157 158 0.905357 AGGGATCCTCTCCAAACGTG 59.095 55.000 12.58 0.00 46.98 4.49
158 159 0.902531 GGGATCCTCTCCAAACGTGA 59.097 55.000 12.58 0.00 46.98 4.35
159 160 1.278127 GGGATCCTCTCCAAACGTGAA 59.722 52.381 12.58 0.00 46.98 3.18
160 161 2.290071 GGGATCCTCTCCAAACGTGAAA 60.290 50.000 12.58 0.00 46.98 2.69
161 162 3.003480 GGATCCTCTCCAAACGTGAAAG 58.997 50.000 3.84 0.00 44.26 2.62
162 163 3.306780 GGATCCTCTCCAAACGTGAAAGA 60.307 47.826 3.84 0.00 44.26 2.52
163 164 4.508662 GATCCTCTCCAAACGTGAAAGAT 58.491 43.478 0.00 0.00 0.00 2.40
164 165 3.926616 TCCTCTCCAAACGTGAAAGATC 58.073 45.455 0.00 0.00 0.00 2.75
165 166 2.668457 CCTCTCCAAACGTGAAAGATCG 59.332 50.000 0.00 0.00 0.00 3.69
166 167 2.668457 CTCTCCAAACGTGAAAGATCGG 59.332 50.000 0.00 0.00 0.00 4.18
167 168 1.128692 CTCCAAACGTGAAAGATCGGC 59.871 52.381 0.00 0.00 0.00 5.54
168 169 0.168128 CCAAACGTGAAAGATCGGCC 59.832 55.000 0.00 0.00 0.00 6.13
169 170 0.168128 CAAACGTGAAAGATCGGCCC 59.832 55.000 0.00 0.00 0.00 5.80
170 171 0.958876 AAACGTGAAAGATCGGCCCC 60.959 55.000 0.00 0.00 0.00 5.80
171 172 1.838073 AACGTGAAAGATCGGCCCCT 61.838 55.000 0.00 0.00 0.00 4.79
172 173 0.974010 ACGTGAAAGATCGGCCCCTA 60.974 55.000 0.00 0.00 0.00 3.53
173 174 0.249489 CGTGAAAGATCGGCCCCTAG 60.249 60.000 0.00 0.00 0.00 3.02
174 175 0.106894 GTGAAAGATCGGCCCCTAGG 59.893 60.000 0.06 0.06 0.00 3.02
176 177 1.004361 AAAGATCGGCCCCTAGGGT 59.996 57.895 26.66 7.39 46.51 4.34
177 178 0.623617 AAAGATCGGCCCCTAGGGTT 60.624 55.000 26.66 9.40 46.51 4.11
178 179 1.054978 AAGATCGGCCCCTAGGGTTC 61.055 60.000 26.66 16.90 46.51 3.62
179 180 2.447959 ATCGGCCCCTAGGGTTCC 60.448 66.667 26.66 23.47 46.51 3.62
193 194 1.349067 GGTTCCGCCCTATATCAGGT 58.651 55.000 0.00 0.00 43.80 4.00
194 195 1.002087 GGTTCCGCCCTATATCAGGTG 59.998 57.143 0.00 0.00 43.80 4.00
195 196 1.692519 GTTCCGCCCTATATCAGGTGT 59.307 52.381 4.33 0.00 43.80 4.16
196 197 1.629043 TCCGCCCTATATCAGGTGTC 58.371 55.000 4.33 0.00 43.80 3.67
197 198 1.147191 TCCGCCCTATATCAGGTGTCT 59.853 52.381 4.33 0.00 43.80 3.41
198 199 1.971357 CCGCCCTATATCAGGTGTCTT 59.029 52.381 4.33 0.00 43.80 3.01
199 200 2.028930 CCGCCCTATATCAGGTGTCTTC 60.029 54.545 4.33 0.00 43.80 2.87
200 201 2.028930 CGCCCTATATCAGGTGTCTTCC 60.029 54.545 0.00 0.00 43.80 3.46
201 202 2.303311 GCCCTATATCAGGTGTCTTCCC 59.697 54.545 0.00 0.00 43.80 3.97
202 203 2.907042 CCCTATATCAGGTGTCTTCCCC 59.093 54.545 0.00 0.00 43.80 4.81
203 204 2.907042 CCTATATCAGGTGTCTTCCCCC 59.093 54.545 0.00 0.00 39.91 5.40
204 205 2.897823 ATATCAGGTGTCTTCCCCCT 57.102 50.000 0.00 0.00 0.00 4.79
205 206 2.661176 TATCAGGTGTCTTCCCCCTT 57.339 50.000 0.00 0.00 0.00 3.95
206 207 1.290134 ATCAGGTGTCTTCCCCCTTC 58.710 55.000 0.00 0.00 0.00 3.46
207 208 0.193574 TCAGGTGTCTTCCCCCTTCT 59.806 55.000 0.00 0.00 0.00 2.85
208 209 1.068121 CAGGTGTCTTCCCCCTTCTT 58.932 55.000 0.00 0.00 0.00 2.52
209 210 1.003696 CAGGTGTCTTCCCCCTTCTTC 59.996 57.143 0.00 0.00 0.00 2.87
210 211 1.132365 AGGTGTCTTCCCCCTTCTTCT 60.132 52.381 0.00 0.00 0.00 2.85
211 212 1.705745 GGTGTCTTCCCCCTTCTTCTT 59.294 52.381 0.00 0.00 0.00 2.52
212 213 2.108425 GGTGTCTTCCCCCTTCTTCTTT 59.892 50.000 0.00 0.00 0.00 2.52
213 214 3.329814 GGTGTCTTCCCCCTTCTTCTTTA 59.670 47.826 0.00 0.00 0.00 1.85
214 215 4.202535 GGTGTCTTCCCCCTTCTTCTTTAA 60.203 45.833 0.00 0.00 0.00 1.52
215 216 5.516768 GGTGTCTTCCCCCTTCTTCTTTAAT 60.517 44.000 0.00 0.00 0.00 1.40
216 217 5.416013 GTGTCTTCCCCCTTCTTCTTTAATG 59.584 44.000 0.00 0.00 0.00 1.90
217 218 4.950475 GTCTTCCCCCTTCTTCTTTAATGG 59.050 45.833 0.00 0.00 0.00 3.16
218 219 4.855599 TCTTCCCCCTTCTTCTTTAATGGA 59.144 41.667 0.00 0.00 0.00 3.41
219 220 5.496168 TCTTCCCCCTTCTTCTTTAATGGAT 59.504 40.000 0.00 0.00 0.00 3.41
220 221 5.129368 TCCCCCTTCTTCTTTAATGGATG 57.871 43.478 0.00 0.00 0.00 3.51
221 222 4.793520 TCCCCCTTCTTCTTTAATGGATGA 59.206 41.667 0.00 0.00 0.00 2.92
222 223 5.436374 TCCCCCTTCTTCTTTAATGGATGAT 59.564 40.000 0.00 0.00 0.00 2.45
223 224 6.623602 TCCCCCTTCTTCTTTAATGGATGATA 59.376 38.462 0.00 0.00 0.00 2.15
224 225 6.717084 CCCCCTTCTTCTTTAATGGATGATAC 59.283 42.308 0.00 0.00 0.00 2.24
225 226 7.290061 CCCCTTCTTCTTTAATGGATGATACA 58.710 38.462 0.00 0.00 0.00 2.29
226 227 7.229506 CCCCTTCTTCTTTAATGGATGATACAC 59.770 40.741 0.00 0.00 0.00 2.90
227 228 7.775093 CCCTTCTTCTTTAATGGATGATACACA 59.225 37.037 0.00 0.00 0.00 3.72
228 229 8.616076 CCTTCTTCTTTAATGGATGATACACAC 58.384 37.037 0.00 0.00 0.00 3.82
229 230 9.166173 CTTCTTCTTTAATGGATGATACACACA 57.834 33.333 0.00 0.00 0.00 3.72
230 231 8.492673 TCTTCTTTAATGGATGATACACACAC 57.507 34.615 0.00 0.00 0.00 3.82
231 232 8.321353 TCTTCTTTAATGGATGATACACACACT 58.679 33.333 0.00 0.00 0.00 3.55
232 233 8.492673 TTCTTTAATGGATGATACACACACTC 57.507 34.615 0.00 0.00 0.00 3.51
233 234 6.756542 TCTTTAATGGATGATACACACACTCG 59.243 38.462 0.00 0.00 0.00 4.18
234 235 4.471904 AATGGATGATACACACACTCGT 57.528 40.909 0.00 0.00 0.00 4.18
241 242 3.176708 GATACACACACTCGTGCGTATT 58.823 45.455 7.47 0.00 46.41 1.89
242 243 3.176708 ATACACACACTCGTGCGTATTC 58.823 45.455 1.46 0.00 44.94 1.75
243 244 4.269076 ATACACACACTCGTGCGTATTCG 61.269 47.826 1.46 0.00 44.94 3.34
244 245 3.010088 CACACTCGTGCGTATTCGA 57.990 52.632 0.00 0.00 36.06 3.71
251 252 3.965209 TCGTGCGTATTCGAGAAAAAG 57.035 42.857 0.00 0.00 39.71 2.27
252 253 3.567530 TCGTGCGTATTCGAGAAAAAGA 58.432 40.909 0.00 0.00 39.71 2.52
260 261 8.589629 TGCGTATTCGAGAAAAAGAACTAATAC 58.410 33.333 0.00 0.00 39.71 1.89
285 286 9.914834 ACCTGCTAAATTGTACTATAATTTCCA 57.085 29.630 6.75 5.83 38.36 3.53
299 300 8.462016 ACTATAATTTCCATCAAGAACTGCAAC 58.538 33.333 0.00 0.00 0.00 4.17
304 306 5.534207 TCCATCAAGAACTGCAACAAAAT 57.466 34.783 0.00 0.00 0.00 1.82
335 337 3.855950 GCACATGCTTTGTAAATGCTCTC 59.144 43.478 0.00 0.00 46.10 3.20
340 342 5.973651 TGCTTTGTAAATGCTCTCTATCG 57.026 39.130 0.00 0.00 46.10 2.92
348 350 6.918569 TGTAAATGCTCTCTATCGTTCTTAGC 59.081 38.462 0.00 0.00 0.00 3.09
359 361 5.615925 ATCGTTCTTAGCAATCCCTAGTT 57.384 39.130 0.00 0.00 0.00 2.24
385 389 5.895636 ACACTTGTCATGAACACTTGAAA 57.104 34.783 0.00 0.00 37.70 2.69
431 435 9.625747 TGATTATCTTAATGGTATGCAGAACAA 57.374 29.630 1.76 0.00 0.00 2.83
469 473 3.627577 ACAAACTGACGCAATCTTGAACT 59.372 39.130 0.00 0.00 0.00 3.01
545 549 5.640147 ACAATCCTTGACATGTAAAGGGAA 58.360 37.500 33.21 20.42 40.89 3.97
565 569 5.066375 GGGAATTTGACGAATCATGTCATCA 59.934 40.000 0.00 0.00 45.10 3.07
566 570 6.238842 GGGAATTTGACGAATCATGTCATCAT 60.239 38.462 0.00 0.00 45.10 2.45
567 571 6.854892 GGAATTTGACGAATCATGTCATCATC 59.145 38.462 0.00 0.00 45.10 2.92
568 572 7.255035 GGAATTTGACGAATCATGTCATCATCT 60.255 37.037 0.00 0.00 45.10 2.90
569 573 8.667076 AATTTGACGAATCATGTCATCATCTA 57.333 30.769 0.00 0.00 45.10 1.98
570 574 7.468922 TTTGACGAATCATGTCATCATCTAC 57.531 36.000 0.00 0.00 45.10 2.59
571 575 6.396829 TGACGAATCATGTCATCATCTACT 57.603 37.500 0.00 0.00 41.20 2.57
572 576 6.809869 TGACGAATCATGTCATCATCTACTT 58.190 36.000 0.00 0.00 41.20 2.24
573 577 7.267857 TGACGAATCATGTCATCATCTACTTT 58.732 34.615 0.00 0.00 41.20 2.66
574 578 7.765819 TGACGAATCATGTCATCATCTACTTTT 59.234 33.333 0.00 0.00 41.20 2.27
575 579 7.913423 ACGAATCATGTCATCATCTACTTTTG 58.087 34.615 0.00 0.00 31.15 2.44
576 580 6.849811 CGAATCATGTCATCATCTACTTTTGC 59.150 38.462 0.00 0.00 31.15 3.68
577 581 7.466320 CGAATCATGTCATCATCTACTTTTGCA 60.466 37.037 0.00 0.00 31.15 4.08
578 582 7.634671 ATCATGTCATCATCTACTTTTGCAA 57.365 32.000 0.00 0.00 31.15 4.08
579 583 7.451501 TCATGTCATCATCTACTTTTGCAAA 57.548 32.000 8.05 8.05 31.15 3.68
580 584 8.058667 TCATGTCATCATCTACTTTTGCAAAT 57.941 30.769 13.65 1.10 31.15 2.32
581 585 8.525316 TCATGTCATCATCTACTTTTGCAAATT 58.475 29.630 13.65 5.88 31.15 1.82
582 586 9.146984 CATGTCATCATCTACTTTTGCAAATTT 57.853 29.630 13.65 5.51 31.15 1.82
583 587 9.715121 ATGTCATCATCTACTTTTGCAAATTTT 57.285 25.926 13.65 2.89 0.00 1.82
584 588 9.545105 TGTCATCATCTACTTTTGCAAATTTTT 57.455 25.926 13.65 0.32 0.00 1.94
660 670 4.759693 CAGGCCACACAAGATTACAAACTA 59.240 41.667 5.01 0.00 0.00 2.24
721 732 9.991388 GTAACAACTTGTAGAACATAACAAACA 57.009 29.630 0.00 0.00 35.32 2.83
758 772 2.503331 TGCAACCAGATCGATGTTTGT 58.497 42.857 0.54 0.00 0.00 2.83
782 796 9.371136 TGTCATGTAAAGTGAATAAGATGAGTC 57.629 33.333 0.00 0.00 0.00 3.36
787 801 9.154847 TGTAAAGTGAATAAGATGAGTCATGTG 57.845 33.333 11.20 0.00 0.00 3.21
789 804 8.853077 AAAGTGAATAAGATGAGTCATGTGAA 57.147 30.769 11.20 0.00 0.00 3.18
791 806 9.458727 AAGTGAATAAGATGAGTCATGTGAATT 57.541 29.630 11.20 10.17 0.00 2.17
803 818 6.327934 AGTCATGTGAATTATCAAGCTTTGC 58.672 36.000 0.00 0.00 37.30 3.68
846 861 4.437820 GCAACAACAAAGAACTTCGATGAC 59.562 41.667 5.16 0.00 0.00 3.06
848 863 4.451900 ACAACAAAGAACTTCGATGACCT 58.548 39.130 5.16 0.00 0.00 3.85
903 918 3.656559 ACGCAACCTACGAAATGTTAGT 58.343 40.909 0.00 0.00 0.00 2.24
905 920 3.676172 CGCAACCTACGAAATGTTAGTGA 59.324 43.478 0.00 0.00 0.00 3.41
979 1000 7.687941 AAAGGCGATGACATTATAAATAGGG 57.312 36.000 0.00 0.00 0.00 3.53
982 1003 5.648092 GGCGATGACATTATAAATAGGGCTT 59.352 40.000 0.00 0.00 0.00 4.35
989 1010 7.448161 TGACATTATAAATAGGGCTTCACCATG 59.552 37.037 0.00 0.00 42.05 3.66
1004 1025 1.561542 ACCATGAAGACCCTCCATCAC 59.438 52.381 0.00 0.00 0.00 3.06
1023 1046 1.499007 ACCCCACCATTCACTCAACTT 59.501 47.619 0.00 0.00 0.00 2.66
1134 1171 3.926058 ACCCTTTACTGCATTCCGTAT 57.074 42.857 0.00 0.00 0.00 3.06
1140 1177 4.875544 TTACTGCATTCCGTATTGCTTC 57.124 40.909 0.00 0.00 39.60 3.86
1182 1273 0.250640 CCAGAGCAGCAACCAACTCT 60.251 55.000 0.00 0.00 40.07 3.24
1183 1274 3.319135 AGAGCAGCAACCAACTCTG 57.681 52.632 0.00 0.00 38.07 3.35
1225 1460 3.909732 TCCACATCAAAAGTTGAACCCT 58.090 40.909 0.00 0.00 43.95 4.34
1261 1496 2.608593 TACACCAGTGTAGCCCAGTA 57.391 50.000 6.55 0.00 44.42 2.74
1288 1523 1.364901 GTCGTTCCTCCGGTCACAA 59.635 57.895 0.00 0.00 0.00 3.33
1475 1710 3.181397 CAGCAACAACAAGGTCAACAAG 58.819 45.455 0.00 0.00 0.00 3.16
1480 1715 5.410067 CAACAACAAGGTCAACAAGAACAT 58.590 37.500 0.00 0.00 35.97 2.71
1507 1745 0.875059 GTTCTAGCCAGCCACAACAC 59.125 55.000 0.00 0.00 0.00 3.32
1511 1749 0.821711 TAGCCAGCCACAACACCAAC 60.822 55.000 0.00 0.00 0.00 3.77
1512 1750 2.422231 GCCAGCCACAACACCAACA 61.422 57.895 0.00 0.00 0.00 3.33
1514 1752 0.179113 CCAGCCACAACACCAACAAC 60.179 55.000 0.00 0.00 0.00 3.32
1516 1754 1.067283 CAGCCACAACACCAACAACAA 60.067 47.619 0.00 0.00 0.00 2.83
1517 1755 1.067213 AGCCACAACACCAACAACAAC 60.067 47.619 0.00 0.00 0.00 3.32
1518 1756 1.337260 GCCACAACACCAACAACAACA 60.337 47.619 0.00 0.00 0.00 3.33
1519 1757 2.868044 GCCACAACACCAACAACAACAA 60.868 45.455 0.00 0.00 0.00 2.83
1521 1759 3.384668 CACAACACCAACAACAACAACA 58.615 40.909 0.00 0.00 0.00 3.33
1522 1760 3.428198 CACAACACCAACAACAACAACAG 59.572 43.478 0.00 0.00 0.00 3.16
1543 1911 2.648059 CAACTGGATCAGGGTTGGATC 58.352 52.381 13.37 0.00 40.31 3.36
1545 1913 0.833287 CTGGATCAGGGTTGGATCGT 59.167 55.000 0.00 0.00 41.62 3.73
1548 1916 0.815615 GATCAGGGTTGGATCGTGGC 60.816 60.000 0.00 0.00 32.62 5.01
1574 1942 1.656652 GACATGGGTGATTCAGACCG 58.343 55.000 0.00 0.00 33.89 4.79
1628 1996 5.280164 CCATACTGCTACACCACCATATCAT 60.280 44.000 0.00 0.00 0.00 2.45
1633 2001 3.928992 GCTACACCACCATATCATCATCG 59.071 47.826 0.00 0.00 0.00 3.84
1672 2093 0.687757 TGGGCGGCTACTGAGAAGAT 60.688 55.000 9.56 0.00 0.00 2.40
1728 2149 3.262151 TGTTTAGTCAATGGTCCGATCCA 59.738 43.478 1.38 1.38 42.01 3.41
1871 2295 1.745115 CATTCGGGCACACGTGGAT 60.745 57.895 21.57 0.00 34.94 3.41
1920 2344 9.555727 TTATGCATTAACTATCTTTGTACTCCC 57.444 33.333 3.54 0.00 0.00 4.30
1921 2345 7.195374 TGCATTAACTATCTTTGTACTCCCT 57.805 36.000 0.00 0.00 0.00 4.20
1922 2346 7.272978 TGCATTAACTATCTTTGTACTCCCTC 58.727 38.462 0.00 0.00 0.00 4.30
1923 2347 6.706716 GCATTAACTATCTTTGTACTCCCTCC 59.293 42.308 0.00 0.00 0.00 4.30
1924 2348 6.461110 TTAACTATCTTTGTACTCCCTCCG 57.539 41.667 0.00 0.00 0.00 4.63
1925 2349 3.978610 ACTATCTTTGTACTCCCTCCGT 58.021 45.455 0.00 0.00 0.00 4.69
1926 2350 4.351127 ACTATCTTTGTACTCCCTCCGTT 58.649 43.478 0.00 0.00 0.00 4.44
1927 2351 4.776308 ACTATCTTTGTACTCCCTCCGTTT 59.224 41.667 0.00 0.00 0.00 3.60
1928 2352 4.635699 ATCTTTGTACTCCCTCCGTTTT 57.364 40.909 0.00 0.00 0.00 2.43
1929 2353 4.426736 TCTTTGTACTCCCTCCGTTTTT 57.573 40.909 0.00 0.00 0.00 1.94
1930 2354 5.549742 TCTTTGTACTCCCTCCGTTTTTA 57.450 39.130 0.00 0.00 0.00 1.52
1931 2355 5.299949 TCTTTGTACTCCCTCCGTTTTTAC 58.700 41.667 0.00 0.00 0.00 2.01
1932 2356 4.961438 TTGTACTCCCTCCGTTTTTACT 57.039 40.909 0.00 0.00 0.00 2.24
1933 2357 4.961438 TGTACTCCCTCCGTTTTTACTT 57.039 40.909 0.00 0.00 0.00 2.24
1934 2358 6.418057 TTGTACTCCCTCCGTTTTTACTTA 57.582 37.500 0.00 0.00 0.00 2.24
1935 2359 5.783111 TGTACTCCCTCCGTTTTTACTTAC 58.217 41.667 0.00 0.00 0.00 2.34
1936 2360 5.539955 TGTACTCCCTCCGTTTTTACTTACT 59.460 40.000 0.00 0.00 0.00 2.24
1937 2361 5.144692 ACTCCCTCCGTTTTTACTTACTC 57.855 43.478 0.00 0.00 0.00 2.59
1938 2362 4.020751 ACTCCCTCCGTTTTTACTTACTCC 60.021 45.833 0.00 0.00 0.00 3.85
1939 2363 3.056607 TCCCTCCGTTTTTACTTACTCCG 60.057 47.826 0.00 0.00 0.00 4.63
1940 2364 2.669924 CCTCCGTTTTTACTTACTCCGC 59.330 50.000 0.00 0.00 0.00 5.54
1941 2365 2.327568 TCCGTTTTTACTTACTCCGCG 58.672 47.619 0.00 0.00 0.00 6.46
1942 2366 2.061028 CCGTTTTTACTTACTCCGCGT 58.939 47.619 4.92 0.00 0.00 6.01
1943 2367 3.057876 TCCGTTTTTACTTACTCCGCGTA 60.058 43.478 4.92 0.00 0.00 4.42
1944 2368 3.859386 CCGTTTTTACTTACTCCGCGTAT 59.141 43.478 4.92 0.00 0.00 3.06
1945 2369 4.327087 CCGTTTTTACTTACTCCGCGTATT 59.673 41.667 4.92 0.00 0.00 1.89
1946 2370 5.514914 CCGTTTTTACTTACTCCGCGTATTA 59.485 40.000 4.92 0.00 0.00 0.98
1947 2371 6.291269 CCGTTTTTACTTACTCCGCGTATTAG 60.291 42.308 4.92 0.00 0.00 1.73
1948 2372 6.251376 CGTTTTTACTTACTCCGCGTATTAGT 59.749 38.462 4.92 5.63 0.00 2.24
1949 2373 7.201350 CGTTTTTACTTACTCCGCGTATTAGTT 60.201 37.037 4.92 0.00 0.00 2.24
1950 2374 8.435430 GTTTTTACTTACTCCGCGTATTAGTTT 58.565 33.333 4.92 0.00 0.00 2.66
1951 2375 8.532977 TTTTACTTACTCCGCGTATTAGTTTT 57.467 30.769 4.92 0.00 0.00 2.43
1952 2376 7.510428 TTACTTACTCCGCGTATTAGTTTTG 57.490 36.000 4.92 0.45 0.00 2.44
1953 2377 5.713025 ACTTACTCCGCGTATTAGTTTTGA 58.287 37.500 4.92 0.00 0.00 2.69
1954 2378 5.574443 ACTTACTCCGCGTATTAGTTTTGAC 59.426 40.000 4.92 0.00 0.00 3.18
1955 2379 4.184079 ACTCCGCGTATTAGTTTTGACT 57.816 40.909 4.92 0.00 0.00 3.41
1956 2380 4.171754 ACTCCGCGTATTAGTTTTGACTC 58.828 43.478 4.92 0.00 0.00 3.36
1957 2381 4.171005 CTCCGCGTATTAGTTTTGACTCA 58.829 43.478 4.92 0.00 0.00 3.41
1958 2382 4.558178 TCCGCGTATTAGTTTTGACTCAA 58.442 39.130 4.92 0.00 0.00 3.02
1959 2383 4.624024 TCCGCGTATTAGTTTTGACTCAAG 59.376 41.667 4.92 0.00 0.00 3.02
1960 2384 4.387862 CCGCGTATTAGTTTTGACTCAAGT 59.612 41.667 4.92 0.00 0.00 3.16
1961 2385 5.444218 CCGCGTATTAGTTTTGACTCAAGTC 60.444 44.000 4.92 3.13 44.97 3.01
1995 2419 9.930693 ATAAAGTTTGACCAAGTTTGTACAAAA 57.069 25.926 22.14 2.59 38.32 2.44
1996 2420 7.646446 AAGTTTGACCAAGTTTGTACAAAAC 57.354 32.000 22.14 15.59 35.16 2.43
1997 2421 6.750148 AGTTTGACCAAGTTTGTACAAAACA 58.250 32.000 22.14 12.29 35.16 2.83
1998 2422 7.210873 AGTTTGACCAAGTTTGTACAAAACAA 58.789 30.769 22.14 16.42 46.41 2.83
2052 2476 8.638629 TGATGTGGAAATATATGCAATGATGA 57.361 30.769 0.00 0.00 0.00 2.92
2053 2477 9.080097 TGATGTGGAAATATATGCAATGATGAA 57.920 29.630 0.00 0.00 0.00 2.57
2056 2480 8.525316 TGTGGAAATATATGCAATGATGAATCC 58.475 33.333 0.00 0.00 0.00 3.01
2057 2481 8.525316 GTGGAAATATATGCAATGATGAATCCA 58.475 33.333 0.00 0.00 0.00 3.41
2058 2482 9.091220 TGGAAATATATGCAATGATGAATCCAA 57.909 29.630 0.00 0.00 0.00 3.53
2075 2499 9.690913 ATGAATCCAATGATATATACTTGGTGG 57.309 33.333 18.54 7.79 39.33 4.61
2076 2500 8.668653 TGAATCCAATGATATATACTTGGTGGT 58.331 33.333 18.54 9.88 39.33 4.16
2077 2501 8.868522 AATCCAATGATATATACTTGGTGGTG 57.131 34.615 18.54 1.97 39.33 4.17
2078 2502 7.387265 TCCAATGATATATACTTGGTGGTGT 57.613 36.000 18.54 0.00 39.33 4.16
2079 2503 8.499288 TCCAATGATATATACTTGGTGGTGTA 57.501 34.615 18.54 3.57 39.33 2.90
2080 2504 9.111519 TCCAATGATATATACTTGGTGGTGTAT 57.888 33.333 18.54 0.00 39.33 2.29
2149 2573 8.810652 TTTGACTTTAGACAAACCAAATATGC 57.189 30.769 3.81 0.00 35.47 3.14
2150 2574 6.607689 TGACTTTAGACAAACCAAATATGCG 58.392 36.000 0.00 0.00 0.00 4.73
2151 2575 5.949735 ACTTTAGACAAACCAAATATGCGG 58.050 37.500 0.00 0.00 0.00 5.69
2152 2576 5.708230 ACTTTAGACAAACCAAATATGCGGA 59.292 36.000 0.00 0.00 0.00 5.54
2153 2577 5.811399 TTAGACAAACCAAATATGCGGAG 57.189 39.130 0.00 0.00 0.00 4.63
2154 2578 3.686016 AGACAAACCAAATATGCGGAGT 58.314 40.909 0.00 0.00 0.00 3.85
2155 2579 4.839121 AGACAAACCAAATATGCGGAGTA 58.161 39.130 0.00 0.00 0.00 2.59
2156 2580 5.250200 AGACAAACCAAATATGCGGAGTAA 58.750 37.500 0.00 0.00 0.00 2.24
2157 2581 5.708230 AGACAAACCAAATATGCGGAGTAAA 59.292 36.000 0.00 0.00 0.00 2.01
2158 2582 6.377146 AGACAAACCAAATATGCGGAGTAAAT 59.623 34.615 0.00 0.00 0.00 1.40
2159 2583 7.554835 AGACAAACCAAATATGCGGAGTAAATA 59.445 33.333 0.00 0.00 0.00 1.40
2160 2584 8.057536 ACAAACCAAATATGCGGAGTAAATAA 57.942 30.769 0.00 0.00 0.00 1.40
2161 2585 8.524487 ACAAACCAAATATGCGGAGTAAATAAA 58.476 29.630 0.00 0.00 0.00 1.40
2162 2586 9.360093 CAAACCAAATATGCGGAGTAAATAAAA 57.640 29.630 0.00 0.00 0.00 1.52
2163 2587 9.930693 AAACCAAATATGCGGAGTAAATAAAAA 57.069 25.926 0.00 0.00 0.00 1.94
2164 2588 8.920509 ACCAAATATGCGGAGTAAATAAAAAC 57.079 30.769 0.00 0.00 0.00 2.43
2165 2589 8.524487 ACCAAATATGCGGAGTAAATAAAAACA 58.476 29.630 0.00 0.00 0.00 2.83
2166 2590 9.019764 CCAAATATGCGGAGTAAATAAAAACAG 57.980 33.333 0.00 0.00 0.00 3.16
2167 2591 9.781834 CAAATATGCGGAGTAAATAAAAACAGA 57.218 29.630 0.00 0.00 0.00 3.41
2169 2593 8.958119 ATATGCGGAGTAAATAAAAACAGAGA 57.042 30.769 0.00 0.00 0.00 3.10
2170 2594 6.721571 TGCGGAGTAAATAAAAACAGAGAG 57.278 37.500 0.00 0.00 0.00 3.20
2171 2595 6.460781 TGCGGAGTAAATAAAAACAGAGAGA 58.539 36.000 0.00 0.00 0.00 3.10
2192 2616 9.384764 GAGAGAGTATGTAGCAAAATAACCTTT 57.615 33.333 0.00 0.00 0.00 3.11
2288 2720 6.239289 CCACAAACCAACTCTTTAATGGTGAT 60.239 38.462 0.00 0.00 46.46 3.06
2344 2776 8.123639 TCACAACTAGTTCTAAATAGCACTCT 57.876 34.615 4.77 0.00 32.25 3.24
2349 2781 5.508200 AGTTCTAAATAGCACTCTCTCCG 57.492 43.478 0.00 0.00 0.00 4.63
2362 2794 8.008513 AGCACTCTCTCCGTAAAGAAATATAA 57.991 34.615 0.00 0.00 0.00 0.98
2369 2801 9.804758 CTCTCCGTAAAGAAATATAAGAGTGTT 57.195 33.333 0.00 0.00 0.00 3.32
2567 3289 8.734030 GCGTTCATTAATTAAGTTTATGCAGAC 58.266 33.333 3.94 0.00 29.23 3.51
2604 3374 1.971695 GGTTGTTTCCGCCCTCCTG 60.972 63.158 0.00 0.00 0.00 3.86
2654 3424 5.296780 CGTTCTGCATATTATGGAAACCACT 59.703 40.000 5.84 0.00 35.80 4.00
2690 3460 5.353394 AACAGAACTTTCTACAGACCACA 57.647 39.130 0.00 0.00 35.34 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.104512 AGAGATACACGGTCCAAATCCA 58.895 45.455 0.00 0.00 0.00 3.41
2 3 3.821421 AGAGATACACGGTCCAAATCC 57.179 47.619 0.00 0.00 0.00 3.01
3 4 4.935808 ACAAAGAGATACACGGTCCAAATC 59.064 41.667 0.00 0.00 0.00 2.17
4 5 4.695455 CACAAAGAGATACACGGTCCAAAT 59.305 41.667 0.00 0.00 0.00 2.32
5 6 4.062293 CACAAAGAGATACACGGTCCAAA 58.938 43.478 0.00 0.00 0.00 3.28
6 7 3.070446 ACACAAAGAGATACACGGTCCAA 59.930 43.478 0.00 0.00 0.00 3.53
7 8 2.631062 ACACAAAGAGATACACGGTCCA 59.369 45.455 0.00 0.00 0.00 4.02
8 9 3.314541 ACACAAAGAGATACACGGTCC 57.685 47.619 0.00 0.00 0.00 4.46
9 10 3.678548 GGAACACAAAGAGATACACGGTC 59.321 47.826 0.00 0.00 0.00 4.79
10 11 3.323979 AGGAACACAAAGAGATACACGGT 59.676 43.478 0.00 0.00 0.00 4.83
11 12 3.926616 AGGAACACAAAGAGATACACGG 58.073 45.455 0.00 0.00 0.00 4.94
12 13 4.152402 CCAAGGAACACAAAGAGATACACG 59.848 45.833 0.00 0.00 0.00 4.49
13 14 5.305585 TCCAAGGAACACAAAGAGATACAC 58.694 41.667 0.00 0.00 0.00 2.90
14 15 5.560722 TCCAAGGAACACAAAGAGATACA 57.439 39.130 0.00 0.00 0.00 2.29
15 16 6.410540 AGATCCAAGGAACACAAAGAGATAC 58.589 40.000 0.00 0.00 0.00 2.24
16 17 6.627087 AGATCCAAGGAACACAAAGAGATA 57.373 37.500 0.00 0.00 0.00 1.98
17 18 5.511386 AGATCCAAGGAACACAAAGAGAT 57.489 39.130 0.00 0.00 0.00 2.75
18 19 4.982241 AGATCCAAGGAACACAAAGAGA 57.018 40.909 0.00 0.00 0.00 3.10
19 20 5.997746 TGTTAGATCCAAGGAACACAAAGAG 59.002 40.000 0.00 0.00 0.00 2.85
20 21 5.763204 GTGTTAGATCCAAGGAACACAAAGA 59.237 40.000 14.01 0.00 46.96 2.52
21 22 6.002062 GTGTTAGATCCAAGGAACACAAAG 57.998 41.667 14.01 0.00 46.96 2.77
26 27 5.003160 CACATGTGTTAGATCCAAGGAACA 58.997 41.667 18.03 0.00 0.00 3.18
27 28 5.003804 ACACATGTGTTAGATCCAAGGAAC 58.996 41.667 25.76 0.00 41.83 3.62
28 29 5.003160 CACACATGTGTTAGATCCAAGGAA 58.997 41.667 28.64 0.00 42.83 3.36
29 30 4.285775 TCACACATGTGTTAGATCCAAGGA 59.714 41.667 28.64 15.36 45.76 3.36
30 31 4.578871 TCACACATGTGTTAGATCCAAGG 58.421 43.478 28.64 13.30 45.76 3.61
31 32 5.876460 TGATCACACATGTGTTAGATCCAAG 59.124 40.000 34.13 21.28 45.76 3.61
32 33 5.803552 TGATCACACATGTGTTAGATCCAA 58.196 37.500 34.13 23.73 45.76 3.53
33 34 5.419239 TGATCACACATGTGTTAGATCCA 57.581 39.130 34.13 25.69 45.76 3.41
34 35 8.613060 AATATGATCACACATGTGTTAGATCC 57.387 34.615 34.13 24.31 45.76 3.36
35 36 9.264719 TGAATATGATCACACATGTGTTAGATC 57.735 33.333 32.56 32.56 45.76 2.75
36 37 9.788889 ATGAATATGATCACACATGTGTTAGAT 57.211 29.630 28.64 26.11 45.76 1.98
37 38 9.048446 CATGAATATGATCACACATGTGTTAGA 57.952 33.333 28.64 22.81 40.50 2.10
38 39 8.833493 ACATGAATATGATCACACATGTGTTAG 58.167 33.333 28.64 18.33 43.85 2.34
39 40 8.735692 ACATGAATATGATCACACATGTGTTA 57.264 30.769 28.64 21.60 43.85 2.41
40 41 7.634671 ACATGAATATGATCACACATGTGTT 57.365 32.000 28.64 15.90 43.85 3.32
41 42 7.415877 CCAACATGAATATGATCACACATGTGT 60.416 37.037 25.76 25.76 44.44 3.72
42 43 6.915843 CCAACATGAATATGATCACACATGTG 59.084 38.462 24.25 24.25 44.44 3.21
43 44 6.604396 ACCAACATGAATATGATCACACATGT 59.396 34.615 21.86 21.86 46.20 3.21
44 45 7.034685 ACCAACATGAATATGATCACACATG 57.965 36.000 21.01 21.01 40.24 3.21
45 46 7.339976 TCAACCAACATGAATATGATCACACAT 59.660 33.333 0.00 0.00 37.73 3.21
46 47 6.658391 TCAACCAACATGAATATGATCACACA 59.342 34.615 0.00 0.00 37.73 3.72
47 48 7.087409 TCAACCAACATGAATATGATCACAC 57.913 36.000 0.00 0.00 37.73 3.82
48 49 6.885918 ACTCAACCAACATGAATATGATCACA 59.114 34.615 0.00 0.00 37.73 3.58
49 50 7.325660 ACTCAACCAACATGAATATGATCAC 57.674 36.000 0.00 0.00 37.73 3.06
50 51 9.631257 AATACTCAACCAACATGAATATGATCA 57.369 29.630 0.00 0.00 37.73 2.92
56 57 9.739276 AGAGAAAATACTCAACCAACATGAATA 57.261 29.630 0.00 0.00 39.14 1.75
57 58 8.641498 AGAGAAAATACTCAACCAACATGAAT 57.359 30.769 0.00 0.00 39.14 2.57
58 59 8.352201 CAAGAGAAAATACTCAACCAACATGAA 58.648 33.333 0.00 0.00 39.14 2.57
59 60 7.522073 GCAAGAGAAAATACTCAACCAACATGA 60.522 37.037 0.00 0.00 39.14 3.07
60 61 6.583806 GCAAGAGAAAATACTCAACCAACATG 59.416 38.462 0.00 0.00 39.14 3.21
61 62 6.568462 CGCAAGAGAAAATACTCAACCAACAT 60.568 38.462 0.00 0.00 39.14 2.71
62 63 5.277779 CGCAAGAGAAAATACTCAACCAACA 60.278 40.000 0.00 0.00 39.14 3.33
63 64 5.147162 CGCAAGAGAAAATACTCAACCAAC 58.853 41.667 0.00 0.00 39.14 3.77
64 65 4.819630 ACGCAAGAGAAAATACTCAACCAA 59.180 37.500 0.00 0.00 39.14 3.67
65 66 4.385825 ACGCAAGAGAAAATACTCAACCA 58.614 39.130 0.00 0.00 39.14 3.67
66 67 5.358298 AACGCAAGAGAAAATACTCAACC 57.642 39.130 0.00 0.00 39.14 3.77
67 68 5.851703 GGAAACGCAAGAGAAAATACTCAAC 59.148 40.000 0.00 0.00 39.14 3.18
68 69 5.048991 GGGAAACGCAAGAGAAAATACTCAA 60.049 40.000 0.00 0.00 39.14 3.02
69 70 4.454504 GGGAAACGCAAGAGAAAATACTCA 59.545 41.667 0.00 0.00 39.14 3.41
70 71 4.142665 GGGGAAACGCAAGAGAAAATACTC 60.143 45.833 0.00 0.00 43.99 2.59
71 72 3.756963 GGGGAAACGCAAGAGAAAATACT 59.243 43.478 0.00 0.00 43.99 2.12
72 73 3.425758 CGGGGAAACGCAAGAGAAAATAC 60.426 47.826 0.00 0.00 45.02 1.89
73 74 2.745281 CGGGGAAACGCAAGAGAAAATA 59.255 45.455 0.00 0.00 45.02 1.40
74 75 1.539827 CGGGGAAACGCAAGAGAAAAT 59.460 47.619 0.00 0.00 45.02 1.82
75 76 0.948678 CGGGGAAACGCAAGAGAAAA 59.051 50.000 0.00 0.00 45.02 2.29
76 77 0.179040 ACGGGGAAACGCAAGAGAAA 60.179 50.000 0.00 0.00 45.02 2.52
77 78 0.882927 CACGGGGAAACGCAAGAGAA 60.883 55.000 0.00 0.00 45.02 2.87
78 79 1.301401 CACGGGGAAACGCAAGAGA 60.301 57.895 0.00 0.00 45.02 3.10
79 80 0.673644 ATCACGGGGAAACGCAAGAG 60.674 55.000 0.00 0.00 45.02 2.85
80 81 0.250553 AATCACGGGGAAACGCAAGA 60.251 50.000 0.00 0.00 45.02 3.02
81 82 0.596082 AAATCACGGGGAAACGCAAG 59.404 50.000 0.00 0.00 45.02 4.01
82 83 0.594110 GAAATCACGGGGAAACGCAA 59.406 50.000 0.00 0.00 45.02 4.85
83 84 1.238625 GGAAATCACGGGGAAACGCA 61.239 55.000 0.00 0.00 45.02 5.24
84 85 1.504900 GGAAATCACGGGGAAACGC 59.495 57.895 0.00 0.00 37.37 4.84
85 86 0.322187 AGGGAAATCACGGGGAAACG 60.322 55.000 0.00 0.00 40.31 3.60
86 87 1.460504 GAGGGAAATCACGGGGAAAC 58.539 55.000 0.00 0.00 0.00 2.78
87 88 0.035820 CGAGGGAAATCACGGGGAAA 60.036 55.000 0.00 0.00 0.00 3.13
88 89 1.196104 ACGAGGGAAATCACGGGGAA 61.196 55.000 0.00 0.00 0.00 3.97
89 90 1.196104 AACGAGGGAAATCACGGGGA 61.196 55.000 0.00 0.00 0.00 4.81
90 91 0.743345 GAACGAGGGAAATCACGGGG 60.743 60.000 0.00 0.00 0.00 5.73
91 92 0.743345 GGAACGAGGGAAATCACGGG 60.743 60.000 0.00 0.00 0.00 5.28
92 93 0.743345 GGGAACGAGGGAAATCACGG 60.743 60.000 0.00 0.00 0.00 4.94
93 94 0.743345 GGGGAACGAGGGAAATCACG 60.743 60.000 0.00 0.00 0.00 4.35
94 95 0.618981 AGGGGAACGAGGGAAATCAC 59.381 55.000 0.00 0.00 0.00 3.06
95 96 0.909623 GAGGGGAACGAGGGAAATCA 59.090 55.000 0.00 0.00 0.00 2.57
96 97 0.180642 GGAGGGGAACGAGGGAAATC 59.819 60.000 0.00 0.00 0.00 2.17
97 98 1.623542 CGGAGGGGAACGAGGGAAAT 61.624 60.000 0.00 0.00 0.00 2.17
98 99 2.288025 CGGAGGGGAACGAGGGAAA 61.288 63.158 0.00 0.00 0.00 3.13
99 100 2.682494 CGGAGGGGAACGAGGGAA 60.682 66.667 0.00 0.00 0.00 3.97
112 113 3.827784 CACGAAGAACGCGCGGAG 61.828 66.667 35.22 19.13 46.94 4.63
113 114 4.634133 ACACGAAGAACGCGCGGA 62.634 61.111 35.22 0.00 46.94 5.54
114 115 3.609422 GAACACGAAGAACGCGCGG 62.609 63.158 35.22 17.49 46.94 6.46
115 116 2.201885 GAACACGAAGAACGCGCG 60.202 61.111 30.96 30.96 46.94 6.86
116 117 2.170273 GGAACACGAAGAACGCGC 59.830 61.111 5.73 0.00 46.94 6.86
117 118 1.773496 GAGGAACACGAAGAACGCG 59.227 57.895 3.53 3.53 46.94 6.01
124 125 5.776699 AGGATCCCTACGAGGAACACGAA 62.777 52.174 8.55 0.00 46.97 3.85
125 126 4.342315 AGGATCCCTACGAGGAACACGA 62.342 54.545 8.55 0.00 46.97 4.35
126 127 3.898301 GAGGATCCCTACGAGGAACACG 61.898 59.091 8.55 0.00 40.81 4.49
127 128 1.682323 GAGGATCCCTACGAGGAACAC 59.318 57.143 8.55 0.00 40.04 3.32
128 129 1.569548 AGAGGATCCCTACGAGGAACA 59.430 52.381 8.55 0.00 40.04 3.18
129 130 2.232399 GAGAGGATCCCTACGAGGAAC 58.768 57.143 8.55 0.00 40.04 3.62
130 131 1.145325 GGAGAGGATCCCTACGAGGAA 59.855 57.143 8.55 0.00 43.01 3.36
131 132 0.772384 GGAGAGGATCCCTACGAGGA 59.228 60.000 8.55 0.00 43.01 3.71
132 133 3.349879 GGAGAGGATCCCTACGAGG 57.650 63.158 8.55 0.00 43.01 4.63
141 142 3.926616 TCTTTCACGTTTGGAGAGGATC 58.073 45.455 0.00 0.00 0.00 3.36
142 143 4.508662 GATCTTTCACGTTTGGAGAGGAT 58.491 43.478 0.00 0.00 0.00 3.24
143 144 3.614150 CGATCTTTCACGTTTGGAGAGGA 60.614 47.826 0.00 0.00 0.00 3.71
144 145 2.668457 CGATCTTTCACGTTTGGAGAGG 59.332 50.000 0.00 0.00 0.00 3.69
145 146 2.668457 CCGATCTTTCACGTTTGGAGAG 59.332 50.000 0.00 0.00 0.00 3.20
146 147 2.683968 CCGATCTTTCACGTTTGGAGA 58.316 47.619 0.00 0.00 0.00 3.71
147 148 1.128692 GCCGATCTTTCACGTTTGGAG 59.871 52.381 0.00 0.00 0.00 3.86
148 149 1.153353 GCCGATCTTTCACGTTTGGA 58.847 50.000 0.00 0.00 0.00 3.53
149 150 0.168128 GGCCGATCTTTCACGTTTGG 59.832 55.000 0.00 0.00 0.00 3.28
150 151 0.168128 GGGCCGATCTTTCACGTTTG 59.832 55.000 0.00 0.00 0.00 2.93
151 152 0.958876 GGGGCCGATCTTTCACGTTT 60.959 55.000 0.00 0.00 0.00 3.60
152 153 1.376812 GGGGCCGATCTTTCACGTT 60.377 57.895 0.00 0.00 0.00 3.99
153 154 0.974010 TAGGGGCCGATCTTTCACGT 60.974 55.000 0.00 0.00 0.00 4.49
154 155 0.249489 CTAGGGGCCGATCTTTCACG 60.249 60.000 0.00 0.00 0.00 4.35
155 156 0.106894 CCTAGGGGCCGATCTTTCAC 59.893 60.000 0.00 0.00 0.00 3.18
156 157 1.054406 CCCTAGGGGCCGATCTTTCA 61.054 60.000 21.44 0.00 35.35 2.69
157 158 1.755384 CCCTAGGGGCCGATCTTTC 59.245 63.158 21.44 0.00 35.35 2.62
158 159 3.987638 CCCTAGGGGCCGATCTTT 58.012 61.111 21.44 0.00 35.35 2.52
183 184 3.863086 AGGGGGAAGACACCTGATATAG 58.137 50.000 0.00 0.00 39.99 1.31
184 185 4.077982 AGAAGGGGGAAGACACCTGATATA 60.078 45.833 0.00 0.00 39.99 0.86
185 186 2.897823 AGGGGGAAGACACCTGATAT 57.102 50.000 0.00 0.00 39.99 1.63
186 187 2.045885 AGAAGGGGGAAGACACCTGATA 59.954 50.000 0.00 0.00 39.99 2.15
187 188 1.203492 AGAAGGGGGAAGACACCTGAT 60.203 52.381 0.00 0.00 39.99 2.90
188 189 0.193574 AGAAGGGGGAAGACACCTGA 59.806 55.000 0.00 0.00 39.99 3.86
189 190 1.003696 GAAGAAGGGGGAAGACACCTG 59.996 57.143 0.00 0.00 39.99 4.00
190 191 1.132365 AGAAGAAGGGGGAAGACACCT 60.132 52.381 0.00 0.00 39.99 4.00
191 192 1.363246 AGAAGAAGGGGGAAGACACC 58.637 55.000 0.00 0.00 39.23 4.16
192 193 3.510531 AAAGAAGAAGGGGGAAGACAC 57.489 47.619 0.00 0.00 0.00 3.67
193 194 5.516591 CCATTAAAGAAGAAGGGGGAAGACA 60.517 44.000 0.00 0.00 0.00 3.41
194 195 4.950475 CCATTAAAGAAGAAGGGGGAAGAC 59.050 45.833 0.00 0.00 0.00 3.01
195 196 4.855599 TCCATTAAAGAAGAAGGGGGAAGA 59.144 41.667 0.00 0.00 0.00 2.87
196 197 5.193099 TCCATTAAAGAAGAAGGGGGAAG 57.807 43.478 0.00 0.00 0.00 3.46
197 198 5.255207 TCATCCATTAAAGAAGAAGGGGGAA 59.745 40.000 0.00 0.00 0.00 3.97
198 199 4.793520 TCATCCATTAAAGAAGAAGGGGGA 59.206 41.667 0.00 0.00 0.00 4.81
199 200 5.129368 TCATCCATTAAAGAAGAAGGGGG 57.871 43.478 0.00 0.00 0.00 5.40
200 201 7.229506 GTGTATCATCCATTAAAGAAGAAGGGG 59.770 40.741 0.00 0.00 0.00 4.79
201 202 7.775093 TGTGTATCATCCATTAAAGAAGAAGGG 59.225 37.037 0.00 0.00 0.00 3.95
202 203 8.616076 GTGTGTATCATCCATTAAAGAAGAAGG 58.384 37.037 0.00 0.00 0.00 3.46
203 204 9.166173 TGTGTGTATCATCCATTAAAGAAGAAG 57.834 33.333 0.00 0.00 0.00 2.85
204 205 8.946085 GTGTGTGTATCATCCATTAAAGAAGAA 58.054 33.333 0.00 0.00 0.00 2.52
205 206 8.321353 AGTGTGTGTATCATCCATTAAAGAAGA 58.679 33.333 0.00 0.00 0.00 2.87
206 207 8.498054 AGTGTGTGTATCATCCATTAAAGAAG 57.502 34.615 0.00 0.00 0.00 2.85
207 208 7.277760 CGAGTGTGTGTATCATCCATTAAAGAA 59.722 37.037 0.00 0.00 0.00 2.52
208 209 6.756542 CGAGTGTGTGTATCATCCATTAAAGA 59.243 38.462 0.00 0.00 0.00 2.52
209 210 6.535150 ACGAGTGTGTGTATCATCCATTAAAG 59.465 38.462 0.00 0.00 0.00 1.85
210 211 6.312672 CACGAGTGTGTGTATCATCCATTAAA 59.687 38.462 0.00 0.00 41.34 1.52
211 212 5.810074 CACGAGTGTGTGTATCATCCATTAA 59.190 40.000 0.00 0.00 41.34 1.40
212 213 5.348164 CACGAGTGTGTGTATCATCCATTA 58.652 41.667 0.00 0.00 41.34 1.90
213 214 4.183865 CACGAGTGTGTGTATCATCCATT 58.816 43.478 0.00 0.00 41.34 3.16
214 215 3.785486 CACGAGTGTGTGTATCATCCAT 58.215 45.455 0.00 0.00 41.34 3.41
215 216 3.230743 CACGAGTGTGTGTATCATCCA 57.769 47.619 0.00 0.00 41.34 3.41
226 227 0.907837 CTCGAATACGCACGAGTGTG 59.092 55.000 14.40 14.40 46.90 3.82
227 228 3.307829 CTCGAATACGCACGAGTGT 57.692 52.632 4.12 4.12 46.90 3.55
231 232 3.567530 TCTTTTTCTCGAATACGCACGA 58.432 40.909 0.00 0.00 39.58 4.35
232 233 3.965209 TCTTTTTCTCGAATACGCACG 57.035 42.857 0.00 0.00 39.58 5.34
233 234 5.265407 AGTTCTTTTTCTCGAATACGCAC 57.735 39.130 0.00 0.00 39.58 5.34
234 235 7.591006 ATTAGTTCTTTTTCTCGAATACGCA 57.409 32.000 0.00 0.00 39.58 5.24
235 236 8.054819 GGTATTAGTTCTTTTTCTCGAATACGC 58.945 37.037 0.00 0.00 39.58 4.42
236 237 9.298774 AGGTATTAGTTCTTTTTCTCGAATACG 57.701 33.333 0.00 0.00 41.26 3.06
238 239 9.095065 GCAGGTATTAGTTCTTTTTCTCGAATA 57.905 33.333 0.00 0.00 0.00 1.75
239 240 7.824779 AGCAGGTATTAGTTCTTTTTCTCGAAT 59.175 33.333 0.00 0.00 0.00 3.34
240 241 7.159372 AGCAGGTATTAGTTCTTTTTCTCGAA 58.841 34.615 0.00 0.00 0.00 3.71
241 242 6.698380 AGCAGGTATTAGTTCTTTTTCTCGA 58.302 36.000 0.00 0.00 0.00 4.04
242 243 6.969828 AGCAGGTATTAGTTCTTTTTCTCG 57.030 37.500 0.00 0.00 0.00 4.04
285 286 6.869913 CCACATATTTTGTTGCAGTTCTTGAT 59.130 34.615 0.00 0.00 36.00 2.57
293 294 2.916716 GCGTCCACATATTTTGTTGCAG 59.083 45.455 0.00 0.00 36.00 4.41
335 337 6.334102 ACTAGGGATTGCTAAGAACGATAG 57.666 41.667 0.00 0.00 46.19 2.08
340 342 5.099042 TGGAACTAGGGATTGCTAAGAAC 57.901 43.478 0.00 0.00 0.00 3.01
348 350 4.398319 ACAAGTGTTGGAACTAGGGATTG 58.602 43.478 0.00 0.00 34.12 2.67
359 361 3.884895 AGTGTTCATGACAAGTGTTGGA 58.115 40.909 0.00 0.00 40.65 3.53
417 421 8.046708 ACTAAATCTGTATTGTTCTGCATACCA 58.953 33.333 0.00 0.00 0.00 3.25
419 423 9.922305 GAACTAAATCTGTATTGTTCTGCATAC 57.078 33.333 0.00 0.00 33.31 2.39
426 430 9.314501 GTTTGTCGAACTAAATCTGTATTGTTC 57.685 33.333 0.00 0.00 35.31 3.18
431 435 7.061905 CGTCAGTTTGTCGAACTAAATCTGTAT 59.938 37.037 5.10 0.00 46.75 2.29
545 549 7.930325 AGTAGATGATGACATGATTCGTCAAAT 59.070 33.333 11.12 6.68 45.91 2.32
583 587 5.105554 TGCAAAAGTAGACTTCCTGCAAAAA 60.106 36.000 21.06 6.46 44.53 1.94
584 588 4.400884 TGCAAAAGTAGACTTCCTGCAAAA 59.599 37.500 21.06 6.71 44.53 2.44
585 589 3.951037 TGCAAAAGTAGACTTCCTGCAAA 59.049 39.130 21.06 7.21 44.53 3.68
586 590 3.550820 TGCAAAAGTAGACTTCCTGCAA 58.449 40.909 21.06 10.84 44.53 4.08
587 591 3.207265 TGCAAAAGTAGACTTCCTGCA 57.793 42.857 20.12 20.12 44.92 4.41
588 592 3.565902 ACTTGCAAAAGTAGACTTCCTGC 59.434 43.478 16.77 16.77 41.39 4.85
589 593 5.757850 AACTTGCAAAAGTAGACTTCCTG 57.242 39.130 0.00 0.00 34.61 3.86
590 594 6.354130 TGTAACTTGCAAAAGTAGACTTCCT 58.646 36.000 0.00 0.00 34.61 3.36
591 595 6.613755 TGTAACTTGCAAAAGTAGACTTCC 57.386 37.500 0.00 0.00 34.61 3.46
592 596 9.595357 GTATTGTAACTTGCAAAAGTAGACTTC 57.405 33.333 0.00 0.00 34.61 3.01
593 597 9.338622 AGTATTGTAACTTGCAAAAGTAGACTT 57.661 29.630 0.00 0.00 37.91 3.01
594 598 8.904099 AGTATTGTAACTTGCAAAAGTAGACT 57.096 30.769 0.00 0.00 31.72 3.24
660 670 2.032981 CTTGCCTTGCACCGAACTT 58.967 52.632 0.00 0.00 38.71 2.66
721 732 6.815089 TGGTTGCATCATTTTCTAAAACTGT 58.185 32.000 0.00 0.00 0.00 3.55
737 748 3.084039 ACAAACATCGATCTGGTTGCAT 58.916 40.909 15.09 0.00 45.71 3.96
782 796 6.327154 TCAGCAAAGCTTGATAATTCACATG 58.673 36.000 0.00 0.00 36.40 3.21
787 801 5.850128 CGCTATCAGCAAAGCTTGATAATTC 59.150 40.000 0.00 0.00 42.58 2.17
789 804 4.214971 CCGCTATCAGCAAAGCTTGATAAT 59.785 41.667 0.00 0.00 42.58 1.28
791 806 3.133691 CCGCTATCAGCAAAGCTTGATA 58.866 45.455 0.00 2.50 42.58 2.15
803 818 6.536224 TGTTGCATATATCATTCCGCTATCAG 59.464 38.462 0.00 0.00 0.00 2.90
846 861 6.231211 ACTTACAAGTGTATTCTTGGACAGG 58.769 40.000 10.44 0.00 46.11 4.00
848 863 7.959175 ACTACTTACAAGTGTATTCTTGGACA 58.041 34.615 4.86 0.00 46.11 4.02
889 904 4.978186 TCTCGGTCACTAACATTTCGTAG 58.022 43.478 0.00 0.00 0.00 3.51
903 918 3.766644 CATGGATGCTTCTCGGTCA 57.233 52.632 0.00 0.00 0.00 4.02
958 975 5.186198 AGCCCTATTTATAATGTCATCGCC 58.814 41.667 0.00 0.00 0.00 5.54
960 977 7.148407 GGTGAAGCCCTATTTATAATGTCATCG 60.148 40.741 0.00 0.00 0.00 3.84
961 978 7.665559 TGGTGAAGCCCTATTTATAATGTCATC 59.334 37.037 0.00 0.00 36.04 2.92
962 979 7.526041 TGGTGAAGCCCTATTTATAATGTCAT 58.474 34.615 0.00 0.00 36.04 3.06
963 980 6.905736 TGGTGAAGCCCTATTTATAATGTCA 58.094 36.000 0.00 0.00 36.04 3.58
964 981 7.665559 TCATGGTGAAGCCCTATTTATAATGTC 59.334 37.037 0.00 0.00 36.04 3.06
966 983 8.408043 TTCATGGTGAAGCCCTATTTATAATG 57.592 34.615 0.00 0.00 36.04 1.90
967 984 8.641498 CTTCATGGTGAAGCCCTATTTATAAT 57.359 34.615 6.75 0.00 46.03 1.28
982 1003 1.839994 GATGGAGGGTCTTCATGGTGA 59.160 52.381 0.00 0.00 28.43 4.02
989 1010 0.914417 TGGGGTGATGGAGGGTCTTC 60.914 60.000 0.00 0.00 0.00 2.87
1004 1025 1.888512 CAAGTTGAGTGAATGGTGGGG 59.111 52.381 0.00 0.00 0.00 4.96
1140 1177 2.514592 ATGGATGTTGCGGCTCCG 60.515 61.111 3.56 3.56 43.09 4.63
1182 1273 0.178995 TGGATGTTCTTGTGGCTGCA 60.179 50.000 0.50 0.00 0.00 4.41
1183 1274 0.524862 CTGGATGTTCTTGTGGCTGC 59.475 55.000 0.00 0.00 0.00 5.25
1246 1481 0.176680 CAGCTACTGGGCTACACTGG 59.823 60.000 0.00 0.00 41.00 4.00
1261 1496 1.338337 CGGAGGAACGACATATCAGCT 59.662 52.381 0.00 0.00 35.47 4.24
1288 1523 0.037303 AGCTGCTATGTTGCACCACT 59.963 50.000 0.00 0.00 38.12 4.00
1415 1650 7.417003 GGTTGAAGTACCTTGTACCAATTGTTT 60.417 37.037 4.43 0.00 35.23 2.83
1438 1673 1.228367 CTGCTGCTGAGGTTGGGTT 60.228 57.895 0.00 0.00 0.00 4.11
1475 1710 2.633488 GCTAGAACCCTGACCATGTTC 58.367 52.381 0.00 0.00 38.88 3.18
1480 1715 1.553690 GCTGGCTAGAACCCTGACCA 61.554 60.000 0.00 0.00 0.00 4.02
1507 1745 2.667481 CAGTTGCTGTTGTTGTTGTTGG 59.333 45.455 0.00 0.00 0.00 3.77
1511 1749 2.937469 TCCAGTTGCTGTTGTTGTTG 57.063 45.000 0.00 0.00 0.00 3.33
1512 1750 3.023119 TGATCCAGTTGCTGTTGTTGTT 58.977 40.909 0.00 0.00 0.00 2.83
1514 1752 2.030540 CCTGATCCAGTTGCTGTTGTTG 60.031 50.000 0.00 0.00 0.00 3.33
1516 1754 1.546323 CCCTGATCCAGTTGCTGTTGT 60.546 52.381 0.00 0.00 0.00 3.32
1517 1755 1.171308 CCCTGATCCAGTTGCTGTTG 58.829 55.000 0.00 0.00 0.00 3.33
1518 1756 0.773644 ACCCTGATCCAGTTGCTGTT 59.226 50.000 0.00 0.00 0.00 3.16
1519 1757 0.773644 AACCCTGATCCAGTTGCTGT 59.226 50.000 0.00 0.00 0.00 4.40
1521 1759 0.038744 CCAACCCTGATCCAGTTGCT 59.961 55.000 11.96 0.00 39.61 3.91
1522 1760 0.038166 TCCAACCCTGATCCAGTTGC 59.962 55.000 11.96 0.00 39.61 4.17
1543 1911 1.300931 CCATGTCCCTATCGCCACG 60.301 63.158 0.00 0.00 0.00 4.94
1545 1913 1.383943 ACCCATGTCCCTATCGCCA 60.384 57.895 0.00 0.00 0.00 5.69
1548 1916 2.368548 TGAATCACCCATGTCCCTATCG 59.631 50.000 0.00 0.00 0.00 2.92
1574 1942 2.175811 GTCGCACATTGCCGGAAC 59.824 61.111 5.05 0.00 41.12 3.62
1651 2019 0.179000 CTTCTCAGTAGCCGCCCATT 59.821 55.000 0.00 0.00 0.00 3.16
1672 2093 6.461648 CCATTTTTCGGATACTAGAGCTCTCA 60.462 42.308 22.17 7.32 0.00 3.27
1728 2149 7.193595 GCACTTTATTTTTCACCGCTACATAT 58.806 34.615 0.00 0.00 0.00 1.78
1729 2150 6.403855 GGCACTTTATTTTTCACCGCTACATA 60.404 38.462 0.00 0.00 0.00 2.29
1908 2332 4.426736 AAAAACGGAGGGAGTACAAAGA 57.573 40.909 0.00 0.00 0.00 2.52
1913 2337 6.030548 AGTAAGTAAAAACGGAGGGAGTAC 57.969 41.667 0.00 0.00 0.00 2.73
1914 2338 5.185828 GGAGTAAGTAAAAACGGAGGGAGTA 59.814 44.000 0.00 0.00 0.00 2.59
1915 2339 4.020751 GGAGTAAGTAAAAACGGAGGGAGT 60.021 45.833 0.00 0.00 0.00 3.85
1916 2340 4.502016 GGAGTAAGTAAAAACGGAGGGAG 58.498 47.826 0.00 0.00 0.00 4.30
1917 2341 3.056607 CGGAGTAAGTAAAAACGGAGGGA 60.057 47.826 0.00 0.00 0.00 4.20
1918 2342 3.256558 CGGAGTAAGTAAAAACGGAGGG 58.743 50.000 0.00 0.00 0.00 4.30
1919 2343 2.669924 GCGGAGTAAGTAAAAACGGAGG 59.330 50.000 0.00 0.00 0.00 4.30
1920 2344 2.343544 CGCGGAGTAAGTAAAAACGGAG 59.656 50.000 0.00 0.00 0.00 4.63
1921 2345 2.288152 ACGCGGAGTAAGTAAAAACGGA 60.288 45.455 12.47 0.00 0.00 4.69
1922 2346 2.061028 ACGCGGAGTAAGTAAAAACGG 58.939 47.619 12.47 0.00 0.00 4.44
1923 2347 5.440260 AATACGCGGAGTAAGTAAAAACG 57.560 39.130 12.47 0.00 39.04 3.60
1924 2348 7.511809 ACTAATACGCGGAGTAAGTAAAAAC 57.488 36.000 12.47 0.00 39.04 2.43
1925 2349 8.532977 AAACTAATACGCGGAGTAAGTAAAAA 57.467 30.769 12.47 0.00 39.04 1.94
1926 2350 8.434661 CAAAACTAATACGCGGAGTAAGTAAAA 58.565 33.333 12.47 0.00 39.04 1.52
1927 2351 7.812191 TCAAAACTAATACGCGGAGTAAGTAAA 59.188 33.333 12.47 0.00 39.04 2.01
1928 2352 7.273381 GTCAAAACTAATACGCGGAGTAAGTAA 59.727 37.037 12.47 0.00 39.04 2.24
1929 2353 6.747280 GTCAAAACTAATACGCGGAGTAAGTA 59.253 38.462 12.47 0.00 39.04 2.24
1930 2354 5.574443 GTCAAAACTAATACGCGGAGTAAGT 59.426 40.000 12.47 3.84 39.04 2.24
1931 2355 5.803967 AGTCAAAACTAATACGCGGAGTAAG 59.196 40.000 12.47 3.10 34.61 2.34
1932 2356 5.713025 AGTCAAAACTAATACGCGGAGTAA 58.287 37.500 12.47 0.00 34.61 2.24
1933 2357 5.106197 TGAGTCAAAACTAATACGCGGAGTA 60.106 40.000 12.47 4.11 36.31 2.59
1934 2358 4.171754 GAGTCAAAACTAATACGCGGAGT 58.828 43.478 12.47 2.60 35.28 3.85
1935 2359 4.171005 TGAGTCAAAACTAATACGCGGAG 58.829 43.478 12.47 4.43 35.28 4.63
1936 2360 4.177165 TGAGTCAAAACTAATACGCGGA 57.823 40.909 12.47 0.00 35.28 5.54
1937 2361 4.387862 ACTTGAGTCAAAACTAATACGCGG 59.612 41.667 12.47 0.00 35.28 6.46
1938 2362 5.511088 ACTTGAGTCAAAACTAATACGCG 57.489 39.130 3.53 3.53 35.28 6.01
1969 2393 9.930693 TTTTGTACAAACTTGGTCAAACTTTAT 57.069 25.926 20.43 0.00 35.95 1.40
1970 2394 9.194271 GTTTTGTACAAACTTGGTCAAACTTTA 57.806 29.630 20.43 0.00 35.95 1.85
1971 2395 7.711339 TGTTTTGTACAAACTTGGTCAAACTTT 59.289 29.630 20.43 0.00 35.95 2.66
1972 2396 7.210873 TGTTTTGTACAAACTTGGTCAAACTT 58.789 30.769 20.43 0.00 35.95 2.66
1973 2397 6.750148 TGTTTTGTACAAACTTGGTCAAACT 58.250 32.000 20.43 0.00 35.95 2.66
1974 2398 7.409465 TTGTTTTGTACAAACTTGGTCAAAC 57.591 32.000 20.43 12.67 43.58 2.93
2026 2450 9.250246 TCATCATTGCATATATTTCCACATCAT 57.750 29.630 0.00 0.00 0.00 2.45
2027 2451 8.638629 TCATCATTGCATATATTTCCACATCA 57.361 30.769 0.00 0.00 0.00 3.07
2030 2454 8.525316 GGATTCATCATTGCATATATTTCCACA 58.475 33.333 0.00 0.00 0.00 4.17
2031 2455 8.525316 TGGATTCATCATTGCATATATTTCCAC 58.475 33.333 0.00 0.00 0.00 4.02
2032 2456 8.653036 TGGATTCATCATTGCATATATTTCCA 57.347 30.769 0.00 0.00 0.00 3.53
2049 2473 9.690913 CCACCAAGTATATATCATTGGATTCAT 57.309 33.333 25.10 8.55 44.04 2.57
2050 2474 8.668653 ACCACCAAGTATATATCATTGGATTCA 58.331 33.333 25.10 0.00 44.04 2.57
2051 2475 8.950210 CACCACCAAGTATATATCATTGGATTC 58.050 37.037 25.10 0.00 44.04 2.52
2052 2476 8.448008 ACACCACCAAGTATATATCATTGGATT 58.552 33.333 25.10 12.28 44.04 3.01
2053 2477 7.988937 ACACCACCAAGTATATATCATTGGAT 58.011 34.615 25.10 13.04 44.04 3.41
2054 2478 7.387265 ACACCACCAAGTATATATCATTGGA 57.613 36.000 25.10 0.00 44.04 3.53
2123 2547 9.423061 GCATATTTGGTTTGTCTAAAGTCAAAT 57.577 29.630 5.84 0.00 40.27 2.32
2124 2548 7.593273 CGCATATTTGGTTTGTCTAAAGTCAAA 59.407 33.333 0.00 0.00 36.00 2.69
2125 2549 7.081349 CGCATATTTGGTTTGTCTAAAGTCAA 58.919 34.615 0.00 0.00 30.52 3.18
2126 2550 6.348950 CCGCATATTTGGTTTGTCTAAAGTCA 60.349 38.462 0.00 0.00 30.52 3.41
2127 2551 6.027749 CCGCATATTTGGTTTGTCTAAAGTC 58.972 40.000 0.00 0.00 30.52 3.01
2128 2552 5.708230 TCCGCATATTTGGTTTGTCTAAAGT 59.292 36.000 0.00 0.00 30.52 2.66
2129 2553 6.128007 ACTCCGCATATTTGGTTTGTCTAAAG 60.128 38.462 0.00 0.00 30.52 1.85
2130 2554 5.708230 ACTCCGCATATTTGGTTTGTCTAAA 59.292 36.000 0.00 0.00 0.00 1.85
2131 2555 5.250200 ACTCCGCATATTTGGTTTGTCTAA 58.750 37.500 0.00 0.00 0.00 2.10
2132 2556 4.839121 ACTCCGCATATTTGGTTTGTCTA 58.161 39.130 0.00 0.00 0.00 2.59
2133 2557 3.686016 ACTCCGCATATTTGGTTTGTCT 58.314 40.909 0.00 0.00 0.00 3.41
2134 2558 5.554822 TTACTCCGCATATTTGGTTTGTC 57.445 39.130 0.00 0.00 0.00 3.18
2135 2559 5.968528 TTTACTCCGCATATTTGGTTTGT 57.031 34.783 0.00 0.00 0.00 2.83
2136 2560 8.918961 TTTATTTACTCCGCATATTTGGTTTG 57.081 30.769 0.00 0.00 0.00 2.93
2137 2561 9.930693 TTTTTATTTACTCCGCATATTTGGTTT 57.069 25.926 0.00 0.00 0.00 3.27
2138 2562 9.361315 GTTTTTATTTACTCCGCATATTTGGTT 57.639 29.630 0.00 0.00 0.00 3.67
2139 2563 8.524487 TGTTTTTATTTACTCCGCATATTTGGT 58.476 29.630 0.00 0.00 0.00 3.67
2140 2564 8.918961 TGTTTTTATTTACTCCGCATATTTGG 57.081 30.769 0.00 0.00 0.00 3.28
2141 2565 9.781834 TCTGTTTTTATTTACTCCGCATATTTG 57.218 29.630 0.00 0.00 0.00 2.32
2143 2567 9.391006 TCTCTGTTTTTATTTACTCCGCATATT 57.609 29.630 0.00 0.00 0.00 1.28
2144 2568 8.958119 TCTCTGTTTTTATTTACTCCGCATAT 57.042 30.769 0.00 0.00 0.00 1.78
2145 2569 8.255206 TCTCTCTGTTTTTATTTACTCCGCATA 58.745 33.333 0.00 0.00 0.00 3.14
2146 2570 7.103641 TCTCTCTGTTTTTATTTACTCCGCAT 58.896 34.615 0.00 0.00 0.00 4.73
2147 2571 6.460781 TCTCTCTGTTTTTATTTACTCCGCA 58.539 36.000 0.00 0.00 0.00 5.69
2148 2572 6.590677 ACTCTCTCTGTTTTTATTTACTCCGC 59.409 38.462 0.00 0.00 0.00 5.54
2149 2573 9.804758 ATACTCTCTCTGTTTTTATTTACTCCG 57.195 33.333 0.00 0.00 0.00 4.63
2155 2579 9.944376 TGCTACATACTCTCTCTGTTTTTATTT 57.056 29.630 0.00 0.00 0.00 1.40
2156 2580 9.944376 TTGCTACATACTCTCTCTGTTTTTATT 57.056 29.630 0.00 0.00 0.00 1.40
2157 2581 9.944376 TTTGCTACATACTCTCTCTGTTTTTAT 57.056 29.630 0.00 0.00 0.00 1.40
2158 2582 9.772973 TTTTGCTACATACTCTCTCTGTTTTTA 57.227 29.630 0.00 0.00 0.00 1.52
2159 2583 8.677148 TTTTGCTACATACTCTCTCTGTTTTT 57.323 30.769 0.00 0.00 0.00 1.94
2160 2584 8.854614 ATTTTGCTACATACTCTCTCTGTTTT 57.145 30.769 0.00 0.00 0.00 2.43
2161 2585 9.944376 TTATTTTGCTACATACTCTCTCTGTTT 57.056 29.630 0.00 0.00 0.00 2.83
2162 2586 9.372369 GTTATTTTGCTACATACTCTCTCTGTT 57.628 33.333 0.00 0.00 0.00 3.16
2163 2587 7.982354 GGTTATTTTGCTACATACTCTCTCTGT 59.018 37.037 0.00 0.00 0.00 3.41
2164 2588 8.200792 AGGTTATTTTGCTACATACTCTCTCTG 58.799 37.037 0.00 0.00 0.00 3.35
2165 2589 8.312669 AGGTTATTTTGCTACATACTCTCTCT 57.687 34.615 0.00 0.00 0.00 3.10
2166 2590 8.950208 AAGGTTATTTTGCTACATACTCTCTC 57.050 34.615 0.00 0.00 0.00 3.20
2221 2645 5.420739 CCTTAATAGGGATCTAGCTCAGTCC 59.579 48.000 0.00 0.00 37.94 3.85
2288 2720 6.364701 TCAAGAAGGTCAAAATTCAGAAGGA 58.635 36.000 0.00 0.00 0.00 3.36
2392 2824 8.066000 CGTCCGTAAAGAAATAAAAGAGTGTTT 58.934 33.333 0.00 0.00 0.00 2.83
2395 2827 6.366877 TCCGTCCGTAAAGAAATAAAAGAGTG 59.633 38.462 0.00 0.00 0.00 3.51
2397 2829 6.589139 ACTCCGTCCGTAAAGAAATAAAAGAG 59.411 38.462 0.00 0.00 0.00 2.85
2398 2830 6.458210 ACTCCGTCCGTAAAGAAATAAAAGA 58.542 36.000 0.00 0.00 0.00 2.52
2399 2831 6.716898 ACTCCGTCCGTAAAGAAATAAAAG 57.283 37.500 0.00 0.00 0.00 2.27
2401 2833 9.467258 CATATACTCCGTCCGTAAAGAAATAAA 57.533 33.333 0.00 0.00 0.00 1.40
2402 2834 8.084073 CCATATACTCCGTCCGTAAAGAAATAA 58.916 37.037 0.00 0.00 0.00 1.40
2403 2835 7.596494 CCATATACTCCGTCCGTAAAGAAATA 58.404 38.462 0.00 0.00 0.00 1.40
2404 2836 6.453092 CCATATACTCCGTCCGTAAAGAAAT 58.547 40.000 0.00 0.00 0.00 2.17
2523 3245 2.053627 CGCATTTTCTGGACAGCAAAC 58.946 47.619 0.00 0.00 0.00 2.93
2560 3282 4.398988 TGTCTGTTTGAGTTTTGTCTGCAT 59.601 37.500 0.00 0.00 0.00 3.96
2567 3289 5.868801 ACAACCAATGTCTGTTTGAGTTTTG 59.131 36.000 0.00 0.00 37.96 2.44
2591 3361 2.150719 TGGAACAGGAGGGCGGAAA 61.151 57.895 0.00 0.00 0.00 3.13
2604 3374 7.100409 AGACTAGCTTCTTTATTCTGTGGAAC 58.900 38.462 0.00 0.00 33.96 3.62
2659 3429 9.226606 TCTGTAGAAAGTTCTGTTTCTGAAAAA 57.773 29.630 4.09 0.00 44.71 1.94
2660 3430 8.665685 GTCTGTAGAAAGTTCTGTTTCTGAAAA 58.334 33.333 4.09 0.00 44.71 2.29
2672 3442 4.067972 TGGTGTGGTCTGTAGAAAGTTC 57.932 45.455 0.00 0.00 0.00 3.01
2682 3452 1.888512 CAGGGAAAATGGTGTGGTCTG 59.111 52.381 0.00 0.00 0.00 3.51
2690 3460 0.779997 AGGACAGCAGGGAAAATGGT 59.220 50.000 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.