Multiple sequence alignment - TraesCS1B01G010300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G010300 chr1B 100.000 3461 0 0 1 3461 4955125 4951665 0.000000e+00 6392.0
1 TraesCS1B01G010300 chr1B 89.015 2385 217 25 680 3037 4597567 4595201 0.000000e+00 2911.0
2 TraesCS1B01G010300 chr1B 88.610 1273 96 24 265 1528 4542368 4541136 0.000000e+00 1502.0
3 TraesCS1B01G010300 chr1B 87.037 324 16 10 3164 3461 4539251 4538928 3.310000e-90 342.0
4 TraesCS1B01G010300 chr1B 85.890 326 16 16 3164 3461 4147127 4147450 1.550000e-83 320.0
5 TraesCS1B01G010300 chr1B 86.508 252 22 4 26 265 46691315 46691566 2.050000e-67 267.0
6 TraesCS1B01G010300 chr1B 88.268 179 10 4 40 207 4109421 4109599 1.630000e-48 204.0
7 TraesCS1B01G010300 chr1B 82.213 253 19 9 26 265 46830555 46830316 9.800000e-46 195.0
8 TraesCS1B01G010300 chr1B 83.654 208 23 4 567 771 4109565 4109764 5.900000e-43 185.0
9 TraesCS1B01G010300 chr1B 84.974 193 11 9 26 204 4519763 4519575 2.740000e-41 180.0
10 TraesCS1B01G010300 chr1B 84.211 190 17 7 615 793 4597958 4597771 4.590000e-39 172.0
11 TraesCS1B01G010300 chr1B 92.500 120 5 2 66 181 4597720 4597601 5.940000e-38 169.0
12 TraesCS1B01G010300 chr1B 83.636 165 17 6 26 182 538505160 538505322 2.780000e-31 147.0
13 TraesCS1B01G010300 chr1B 92.473 93 5 2 3371 3461 4797538 4797446 7.790000e-27 132.0
14 TraesCS1B01G010300 chr1B 92.308 91 6 1 3371 3460 4594962 4594872 1.010000e-25 128.0
15 TraesCS1B01G010300 chr1B 91.398 93 6 2 3371 3461 4112721 4112813 3.630000e-25 126.0
16 TraesCS1B01G010300 chr1B 85.714 126 9 6 301 418 4597757 4597633 1.300000e-24 124.0
17 TraesCS1B01G010300 chr1B 81.739 115 12 4 308 418 4543330 4543221 1.710000e-13 87.9
18 TraesCS1B01G010300 chr1B 79.032 124 9 4 308 415 4109416 4109538 6.200000e-08 69.4
19 TraesCS1B01G010300 chr6A 88.159 2770 237 39 362 3090 613493344 613496063 0.000000e+00 3214.0
20 TraesCS1B01G010300 chr6A 87.591 137 13 2 3208 3343 64063662 64063529 4.620000e-34 156.0
21 TraesCS1B01G010300 chr6A 97.222 72 2 0 3088 3159 611411293 611411222 4.690000e-24 122.0
22 TraesCS1B01G010300 chr6A 95.652 69 3 0 3393 3461 613496236 613496304 1.020000e-20 111.0
23 TraesCS1B01G010300 chr3D 90.653 2450 170 26 561 2991 560024970 560022561 0.000000e+00 3201.0
24 TraesCS1B01G010300 chr3D 88.024 167 5 8 26 182 560025675 560025514 2.120000e-42 183.0
25 TraesCS1B01G010300 chr5B 89.486 2511 197 39 561 3037 60826081 60823604 0.000000e+00 3112.0
26 TraesCS1B01G010300 chr5B 92.174 115 9 0 3237 3351 60823496 60823382 2.760000e-36 163.0
27 TraesCS1B01G010300 chr5B 97.183 71 2 0 3089 3159 704989272 704989342 1.690000e-23 121.0
28 TraesCS1B01G010300 chr5B 90.196 51 2 2 3164 3211 60823534 60823484 2.880000e-06 63.9
29 TraesCS1B01G010300 chr5D 89.966 2342 176 30 561 2877 57819443 57821750 0.000000e+00 2968.0
30 TraesCS1B01G010300 chr5D 83.696 184 14 8 36 207 535497279 535497100 3.580000e-35 159.0
31 TraesCS1B01G010300 chr5D 97.297 74 2 0 3086 3159 539055542 539055469 3.630000e-25 126.0
32 TraesCS1B01G010300 chr5D 94.872 78 4 0 3080 3157 540590965 540590888 4.690000e-24 122.0
33 TraesCS1B01G010300 chr5D 94.872 78 4 0 3080 3157 540835500 540835423 4.690000e-24 122.0
34 TraesCS1B01G010300 chr5D 93.333 45 0 2 3164 3205 57822044 57822088 2.880000e-06 63.9
35 TraesCS1B01G010300 chr1A 89.818 2249 178 30 712 2930 2943273 2945500 0.000000e+00 2837.0
36 TraesCS1B01G010300 chr1A 94.637 1734 81 4 970 2702 3013316 3015038 0.000000e+00 2676.0
37 TraesCS1B01G010300 chr1A 87.573 2382 199 40 567 2928 32545493 32547797 0.000000e+00 2669.0
38 TraesCS1B01G010300 chr1A 88.836 2096 196 30 627 2699 3533178 3531098 0.000000e+00 2540.0
39 TraesCS1B01G010300 chr1A 85.996 914 81 28 601 1496 2949656 2950540 0.000000e+00 935.0
40 TraesCS1B01G010300 chr1A 86.562 320 21 2 3164 3461 3015514 3015833 1.990000e-87 333.0
41 TraesCS1B01G010300 chr1A 94.286 70 4 0 3392 3461 32548113 32548182 1.310000e-19 108.0
42 TraesCS1B01G010300 chr6B 89.295 1971 172 22 671 2631 120595424 120593483 0.000000e+00 2435.0
43 TraesCS1B01G010300 chr6B 88.058 2085 187 32 593 2666 120355153 120353120 0.000000e+00 2414.0
44 TraesCS1B01G010300 chr6B 96.737 521 16 1 2526 3045 655217465 655216945 0.000000e+00 867.0
45 TraesCS1B01G010300 chr6B 96.372 441 14 2 2526 2965 380972552 380972991 0.000000e+00 725.0
46 TraesCS1B01G010300 chr6B 93.671 79 3 2 3083 3159 95757372 95757294 2.180000e-22 117.0
47 TraesCS1B01G010300 chr2B 96.183 524 19 1 2523 3045 472576576 472577099 0.000000e+00 856.0
48 TraesCS1B01G010300 chr2B 96.847 444 13 1 2523 2965 103486569 103487012 0.000000e+00 741.0
49 TraesCS1B01G010300 chr2B 86.061 165 13 6 26 182 741895699 741895861 5.940000e-38 169.0
50 TraesCS1B01G010300 chr4B 96.622 444 14 1 2523 2965 630238443 630238886 0.000000e+00 736.0
51 TraesCS1B01G010300 chr4B 97.222 72 2 0 3088 3159 466965830 466965759 4.690000e-24 122.0
52 TraesCS1B01G010300 chr3B 96.171 444 16 1 2526 2968 778613023 778612580 0.000000e+00 725.0
53 TraesCS1B01G010300 chrUn 88.446 251 6 4 3233 3461 318171397 318171646 7.310000e-72 281.0
54 TraesCS1B01G010300 chrUn 83.186 113 7 6 601 711 325465997 325466099 3.680000e-15 93.5
55 TraesCS1B01G010300 chr7B 97.183 71 2 0 3089 3159 190338588 190338658 1.690000e-23 121.0
56 TraesCS1B01G010300 chr3A 97.183 71 2 0 3089 3159 523554214 523554144 1.690000e-23 121.0
57 TraesCS1B01G010300 chr6D 82.707 133 17 3 3208 3337 53142281 53142152 2.820000e-21 113.0
58 TraesCS1B01G010300 chr1D 82.222 135 16 6 131 265 49746195 49746321 3.650000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G010300 chr1B 4951665 4955125 3460 True 6392.000000 6392 100.000000 1 3461 1 chr1B.!!$R3 3460
1 TraesCS1B01G010300 chr1B 4594872 4597958 3086 True 700.800000 2911 88.749600 66 3460 5 chr1B.!!$R6 3394
2 TraesCS1B01G010300 chr1B 4538928 4543330 4402 True 643.966667 1502 85.795333 265 3461 3 chr1B.!!$R5 3196
3 TraesCS1B01G010300 chr6A 613493344 613496304 2960 False 1662.500000 3214 91.905500 362 3461 2 chr6A.!!$F1 3099
4 TraesCS1B01G010300 chr3D 560022561 560025675 3114 True 1692.000000 3201 89.338500 26 2991 2 chr3D.!!$R1 2965
5 TraesCS1B01G010300 chr5B 60823382 60826081 2699 True 1112.966667 3112 90.618667 561 3351 3 chr5B.!!$R1 2790
6 TraesCS1B01G010300 chr5D 57819443 57822088 2645 False 1515.950000 2968 91.649500 561 3205 2 chr5D.!!$F1 2644
7 TraesCS1B01G010300 chr1A 2943273 2945500 2227 False 2837.000000 2837 89.818000 712 2930 1 chr1A.!!$F1 2218
8 TraesCS1B01G010300 chr1A 3531098 3533178 2080 True 2540.000000 2540 88.836000 627 2699 1 chr1A.!!$R1 2072
9 TraesCS1B01G010300 chr1A 3013316 3015833 2517 False 1504.500000 2676 90.599500 970 3461 2 chr1A.!!$F3 2491
10 TraesCS1B01G010300 chr1A 32545493 32548182 2689 False 1388.500000 2669 90.929500 567 3461 2 chr1A.!!$F4 2894
11 TraesCS1B01G010300 chr1A 2949656 2950540 884 False 935.000000 935 85.996000 601 1496 1 chr1A.!!$F2 895
12 TraesCS1B01G010300 chr6B 120593483 120595424 1941 True 2435.000000 2435 89.295000 671 2631 1 chr6B.!!$R3 1960
13 TraesCS1B01G010300 chr6B 120353120 120355153 2033 True 2414.000000 2414 88.058000 593 2666 1 chr6B.!!$R2 2073
14 TraesCS1B01G010300 chr6B 655216945 655217465 520 True 867.000000 867 96.737000 2526 3045 1 chr6B.!!$R4 519
15 TraesCS1B01G010300 chr2B 472576576 472577099 523 False 856.000000 856 96.183000 2523 3045 1 chr2B.!!$F2 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.038166 TTGGCCCTGTGAACTCATCC 59.962 55.000 0.00 0.00 0.00 3.51 F
106 107 0.178992 TCTTGCCCAACCAAGACCTG 60.179 55.000 0.81 0.00 44.49 4.00 F
192 197 0.453390 CTCCTTGCGGAATTGCTTCC 59.547 55.000 0.00 0.00 46.48 3.46 F
701 1908 0.752743 TAATGATGTGGCCTGCCTGC 60.753 55.000 9.97 3.23 36.94 4.85 F
1621 3543 1.202940 AGCTCCAGAAGTTTGGGTTCC 60.203 52.381 4.81 0.00 38.81 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1894 3823 0.395586 TGCAGGTTGAGCCAAAGTGT 60.396 50.000 0.00 0.00 40.61 3.55 R
2035 3964 0.622136 TCTGATGGCCAGTCAGCATT 59.378 50.000 27.24 5.72 42.17 3.56 R
2185 4114 4.112634 TGACACAATATAAGCTCGAGTGC 58.887 43.478 15.13 0.56 0.00 4.40 R
2359 4288 0.321475 GCAGCTTGCAGAGAGACCTT 60.321 55.000 3.64 0.00 44.26 3.50 R
3154 5371 0.321671 GCACACAGCTACTCCCTCAA 59.678 55.000 0.00 0.00 41.15 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 0.038166 TTGGCCCTGTGAACTCATCC 59.962 55.000 0.00 0.00 0.00 3.51
48 49 0.842030 TGGCCCTGTGAACTCATCCT 60.842 55.000 0.00 0.00 0.00 3.24
71 72 5.791666 TGCTGTGGCAAAATTATTGATTGA 58.208 33.333 0.00 0.00 46.36 2.57
72 73 6.408035 TGCTGTGGCAAAATTATTGATTGAT 58.592 32.000 0.00 0.00 46.36 2.57
73 74 6.879993 TGCTGTGGCAAAATTATTGATTGATT 59.120 30.769 0.00 0.00 46.36 2.57
75 76 7.906527 GCTGTGGCAAAATTATTGATTGATTTC 59.093 33.333 0.00 0.00 38.54 2.17
76 77 8.266392 TGTGGCAAAATTATTGATTGATTTCC 57.734 30.769 0.00 0.00 0.00 3.13
77 78 7.336427 TGTGGCAAAATTATTGATTGATTTCCC 59.664 33.333 0.00 0.00 0.00 3.97
95 96 2.714250 TCCCTACTTTCTTTCTTGCCCA 59.286 45.455 0.00 0.00 0.00 5.36
106 107 0.178992 TCTTGCCCAACCAAGACCTG 60.179 55.000 0.81 0.00 44.49 4.00
164 169 8.746922 TTTTCATGTTCAGATTCAGCAATTAC 57.253 30.769 0.00 0.00 0.00 1.89
165 170 7.451501 TTCATGTTCAGATTCAGCAATTACA 57.548 32.000 0.00 0.00 0.00 2.41
166 171 7.451501 TCATGTTCAGATTCAGCAATTACAA 57.548 32.000 0.00 0.00 0.00 2.41
167 172 7.532571 TCATGTTCAGATTCAGCAATTACAAG 58.467 34.615 0.00 0.00 0.00 3.16
168 173 6.882610 TGTTCAGATTCAGCAATTACAAGT 57.117 33.333 0.00 0.00 0.00 3.16
169 174 7.977789 TGTTCAGATTCAGCAATTACAAGTA 57.022 32.000 0.00 0.00 0.00 2.24
170 175 8.389779 TGTTCAGATTCAGCAATTACAAGTAA 57.610 30.769 0.00 0.00 0.00 2.24
171 176 9.013229 TGTTCAGATTCAGCAATTACAAGTAAT 57.987 29.630 0.00 0.00 37.36 1.89
172 177 9.846248 GTTCAGATTCAGCAATTACAAGTAATT 57.154 29.630 11.38 11.38 44.11 1.40
174 179 9.453572 TCAGATTCAGCAATTACAAGTAATTCT 57.546 29.630 13.67 11.36 42.11 2.40
175 180 9.713740 CAGATTCAGCAATTACAAGTAATTCTC 57.286 33.333 13.67 9.60 42.11 2.87
176 181 8.897752 AGATTCAGCAATTACAAGTAATTCTCC 58.102 33.333 13.67 7.12 42.11 3.71
177 182 8.814038 ATTCAGCAATTACAAGTAATTCTCCT 57.186 30.769 13.67 8.81 42.11 3.69
178 183 8.635765 TTCAGCAATTACAAGTAATTCTCCTT 57.364 30.769 13.67 0.00 42.11 3.36
179 184 8.044060 TCAGCAATTACAAGTAATTCTCCTTG 57.956 34.615 13.67 9.62 42.11 3.61
180 185 6.749118 CAGCAATTACAAGTAATTCTCCTTGC 59.251 38.462 13.67 14.00 42.11 4.01
181 186 5.739161 GCAATTACAAGTAATTCTCCTTGCG 59.261 40.000 13.67 3.99 42.11 4.85
182 187 6.258160 CAATTACAAGTAATTCTCCTTGCGG 58.742 40.000 13.67 0.00 42.11 5.69
183 188 3.695830 ACAAGTAATTCTCCTTGCGGA 57.304 42.857 10.64 0.00 41.36 5.54
184 189 4.015872 ACAAGTAATTCTCCTTGCGGAA 57.984 40.909 10.64 0.00 41.36 4.30
185 190 4.589908 ACAAGTAATTCTCCTTGCGGAAT 58.410 39.130 10.64 0.00 41.36 3.01
186 191 5.010282 ACAAGTAATTCTCCTTGCGGAATT 58.990 37.500 10.64 0.00 41.36 2.17
187 192 5.106157 ACAAGTAATTCTCCTTGCGGAATTG 60.106 40.000 10.08 0.00 41.36 2.32
188 193 2.947448 AATTCTCCTTGCGGAATTGC 57.053 45.000 0.00 0.00 39.66 3.56
189 194 2.134789 ATTCTCCTTGCGGAATTGCT 57.865 45.000 0.00 0.00 39.29 3.91
190 195 1.909700 TTCTCCTTGCGGAATTGCTT 58.090 45.000 0.00 0.00 39.29 3.91
191 196 1.453155 TCTCCTTGCGGAATTGCTTC 58.547 50.000 0.00 0.00 39.29 3.86
192 197 0.453390 CTCCTTGCGGAATTGCTTCC 59.547 55.000 0.00 0.00 46.48 3.46
204 209 4.622701 AATTGCTTCCGTCAATTCTAGC 57.377 40.909 0.00 0.00 39.21 3.42
205 210 3.334583 TTGCTTCCGTCAATTCTAGCT 57.665 42.857 0.00 0.00 0.00 3.32
206 211 2.893637 TGCTTCCGTCAATTCTAGCTC 58.106 47.619 0.00 0.00 0.00 4.09
207 212 2.233676 TGCTTCCGTCAATTCTAGCTCA 59.766 45.455 0.00 0.00 0.00 4.26
208 213 3.118629 TGCTTCCGTCAATTCTAGCTCAT 60.119 43.478 0.00 0.00 0.00 2.90
209 214 3.873952 GCTTCCGTCAATTCTAGCTCATT 59.126 43.478 0.00 0.00 0.00 2.57
210 215 5.050490 GCTTCCGTCAATTCTAGCTCATTA 58.950 41.667 0.00 0.00 0.00 1.90
211 216 5.698545 GCTTCCGTCAATTCTAGCTCATTAT 59.301 40.000 0.00 0.00 0.00 1.28
212 217 6.203723 GCTTCCGTCAATTCTAGCTCATTATT 59.796 38.462 0.00 0.00 0.00 1.40
213 218 7.570324 GCTTCCGTCAATTCTAGCTCATTATTC 60.570 40.741 0.00 0.00 0.00 1.75
214 219 6.816136 TCCGTCAATTCTAGCTCATTATTCA 58.184 36.000 0.00 0.00 0.00 2.57
215 220 6.925718 TCCGTCAATTCTAGCTCATTATTCAG 59.074 38.462 0.00 0.00 0.00 3.02
216 221 6.146837 CCGTCAATTCTAGCTCATTATTCAGG 59.853 42.308 0.00 0.00 0.00 3.86
217 222 6.347240 CGTCAATTCTAGCTCATTATTCAGGC 60.347 42.308 0.00 0.00 0.00 4.85
218 223 6.709846 GTCAATTCTAGCTCATTATTCAGGCT 59.290 38.462 0.00 0.00 37.08 4.58
219 224 6.933521 TCAATTCTAGCTCATTATTCAGGCTC 59.066 38.462 0.00 0.00 34.88 4.70
220 225 6.684897 ATTCTAGCTCATTATTCAGGCTCT 57.315 37.500 0.00 0.00 34.88 4.09
221 226 5.465532 TCTAGCTCATTATTCAGGCTCTG 57.534 43.478 0.00 0.00 34.88 3.35
222 227 2.848691 AGCTCATTATTCAGGCTCTGC 58.151 47.619 0.00 0.00 0.00 4.26
223 228 2.438763 AGCTCATTATTCAGGCTCTGCT 59.561 45.455 0.00 0.00 0.00 4.24
224 229 3.645212 AGCTCATTATTCAGGCTCTGCTA 59.355 43.478 0.00 0.00 0.00 3.49
225 230 3.745458 GCTCATTATTCAGGCTCTGCTAC 59.255 47.826 0.00 0.00 0.00 3.58
226 231 4.502950 GCTCATTATTCAGGCTCTGCTACT 60.503 45.833 0.00 0.00 0.00 2.57
227 232 5.609423 CTCATTATTCAGGCTCTGCTACTT 58.391 41.667 0.00 0.00 0.00 2.24
228 233 6.731292 TCATTATTCAGGCTCTGCTACTTA 57.269 37.500 0.00 0.00 0.00 2.24
229 234 7.124573 TCATTATTCAGGCTCTGCTACTTAA 57.875 36.000 0.00 0.00 0.00 1.85
230 235 7.739825 TCATTATTCAGGCTCTGCTACTTAAT 58.260 34.615 0.00 0.00 0.00 1.40
231 236 7.875041 TCATTATTCAGGCTCTGCTACTTAATC 59.125 37.037 0.00 0.00 0.00 1.75
232 237 5.620738 ATTCAGGCTCTGCTACTTAATCA 57.379 39.130 0.00 0.00 0.00 2.57
233 238 5.420725 TTCAGGCTCTGCTACTTAATCAA 57.579 39.130 0.00 0.00 0.00 2.57
234 239 5.016051 TCAGGCTCTGCTACTTAATCAAG 57.984 43.478 0.00 0.00 37.81 3.02
235 240 4.125703 CAGGCTCTGCTACTTAATCAAGG 58.874 47.826 0.00 0.00 35.97 3.61
236 241 3.777522 AGGCTCTGCTACTTAATCAAGGT 59.222 43.478 0.00 0.00 35.97 3.50
237 242 3.873952 GGCTCTGCTACTTAATCAAGGTG 59.126 47.826 0.00 0.00 35.97 4.00
238 243 3.873952 GCTCTGCTACTTAATCAAGGTGG 59.126 47.826 0.00 0.00 35.97 4.61
239 244 3.873910 TCTGCTACTTAATCAAGGTGGC 58.126 45.455 0.00 0.00 35.97 5.01
240 245 3.263170 TCTGCTACTTAATCAAGGTGGCA 59.737 43.478 0.00 0.00 35.97 4.92
241 246 3.609853 TGCTACTTAATCAAGGTGGCAG 58.390 45.455 0.00 0.00 35.97 4.85
242 247 2.356069 GCTACTTAATCAAGGTGGCAGC 59.644 50.000 9.02 9.02 35.97 5.25
243 248 2.887151 ACTTAATCAAGGTGGCAGCT 57.113 45.000 14.51 14.51 35.97 4.24
244 249 4.683400 GCTACTTAATCAAGGTGGCAGCTA 60.683 45.833 20.91 5.52 35.97 3.32
245 250 3.878778 ACTTAATCAAGGTGGCAGCTAG 58.121 45.455 20.91 14.45 35.97 3.42
246 251 3.264450 ACTTAATCAAGGTGGCAGCTAGT 59.736 43.478 20.91 15.12 35.97 2.57
247 252 2.887151 AATCAAGGTGGCAGCTAGTT 57.113 45.000 20.91 11.90 0.00 2.24
248 253 2.887151 ATCAAGGTGGCAGCTAGTTT 57.113 45.000 20.91 0.42 0.00 2.66
249 254 4.301072 AATCAAGGTGGCAGCTAGTTTA 57.699 40.909 20.91 4.34 0.00 2.01
250 255 3.780804 TCAAGGTGGCAGCTAGTTTAA 57.219 42.857 20.91 0.00 0.00 1.52
251 256 4.301072 TCAAGGTGGCAGCTAGTTTAAT 57.699 40.909 20.91 0.00 0.00 1.40
252 257 4.662278 TCAAGGTGGCAGCTAGTTTAATT 58.338 39.130 20.91 0.00 0.00 1.40
253 258 5.076873 TCAAGGTGGCAGCTAGTTTAATTT 58.923 37.500 20.91 0.00 0.00 1.82
254 259 6.242396 TCAAGGTGGCAGCTAGTTTAATTTA 58.758 36.000 20.91 0.00 0.00 1.40
255 260 6.717540 TCAAGGTGGCAGCTAGTTTAATTTAA 59.282 34.615 20.91 0.00 0.00 1.52
256 261 7.396055 TCAAGGTGGCAGCTAGTTTAATTTAAT 59.604 33.333 20.91 0.00 0.00 1.40
257 262 7.100458 AGGTGGCAGCTAGTTTAATTTAATG 57.900 36.000 19.12 0.00 0.00 1.90
258 263 6.889722 AGGTGGCAGCTAGTTTAATTTAATGA 59.110 34.615 19.12 0.00 0.00 2.57
259 264 7.561356 AGGTGGCAGCTAGTTTAATTTAATGAT 59.439 33.333 19.12 0.00 0.00 2.45
260 265 7.649306 GGTGGCAGCTAGTTTAATTTAATGATG 59.351 37.037 9.90 0.00 0.00 3.07
261 266 8.190784 GTGGCAGCTAGTTTAATTTAATGATGT 58.809 33.333 0.00 0.00 0.00 3.06
262 267 8.190122 TGGCAGCTAGTTTAATTTAATGATGTG 58.810 33.333 0.00 0.00 0.00 3.21
263 268 7.649306 GGCAGCTAGTTTAATTTAATGATGTGG 59.351 37.037 0.00 0.00 0.00 4.17
264 269 7.168135 GCAGCTAGTTTAATTTAATGATGTGGC 59.832 37.037 0.00 0.00 0.00 5.01
265 270 8.190122 CAGCTAGTTTAATTTAATGATGTGGCA 58.810 33.333 0.00 0.00 0.00 4.92
266 271 8.408601 AGCTAGTTTAATTTAATGATGTGGCAG 58.591 33.333 0.00 0.00 0.00 4.85
267 272 8.405531 GCTAGTTTAATTTAATGATGTGGCAGA 58.594 33.333 0.00 0.00 0.00 4.26
278 283 7.606858 AATGATGTGGCAGATATTAGATTCG 57.393 36.000 0.00 0.00 0.00 3.34
279 284 6.101650 TGATGTGGCAGATATTAGATTCGT 57.898 37.500 0.00 0.00 0.00 3.85
280 285 5.928264 TGATGTGGCAGATATTAGATTCGTG 59.072 40.000 0.00 0.00 0.00 4.35
281 286 5.276461 TGTGGCAGATATTAGATTCGTGT 57.724 39.130 0.00 0.00 0.00 4.49
282 287 5.670485 TGTGGCAGATATTAGATTCGTGTT 58.330 37.500 0.00 0.00 0.00 3.32
283 288 6.811954 TGTGGCAGATATTAGATTCGTGTTA 58.188 36.000 0.00 0.00 0.00 2.41
284 289 7.441836 TGTGGCAGATATTAGATTCGTGTTAT 58.558 34.615 0.00 0.00 0.00 1.89
285 290 7.598869 TGTGGCAGATATTAGATTCGTGTTATC 59.401 37.037 0.00 0.00 0.00 1.75
286 291 7.815068 GTGGCAGATATTAGATTCGTGTTATCT 59.185 37.037 0.00 0.00 36.39 1.98
287 292 9.020731 TGGCAGATATTAGATTCGTGTTATCTA 57.979 33.333 0.00 0.00 34.35 1.98
298 303 9.197694 AGATTCGTGTTATCTATGAATAACTGC 57.802 33.333 11.22 5.85 40.96 4.40
299 304 8.887036 ATTCGTGTTATCTATGAATAACTGCA 57.113 30.769 11.22 0.00 40.96 4.41
300 305 7.694388 TCGTGTTATCTATGAATAACTGCAC 57.306 36.000 11.22 0.00 40.96 4.57
301 306 6.700081 TCGTGTTATCTATGAATAACTGCACC 59.300 38.462 11.22 0.00 40.96 5.01
302 307 6.073765 CGTGTTATCTATGAATAACTGCACCC 60.074 42.308 11.22 0.00 40.96 4.61
303 308 6.992715 GTGTTATCTATGAATAACTGCACCCT 59.007 38.462 11.22 0.00 40.96 4.34
304 309 6.992123 TGTTATCTATGAATAACTGCACCCTG 59.008 38.462 11.22 0.00 40.96 4.45
305 310 5.636903 ATCTATGAATAACTGCACCCTGT 57.363 39.130 0.00 0.00 0.00 4.00
306 311 4.769688 TCTATGAATAACTGCACCCTGTG 58.230 43.478 0.00 0.00 36.51 3.66
307 312 3.719268 ATGAATAACTGCACCCTGTGA 57.281 42.857 0.00 0.00 35.23 3.58
308 313 3.500448 TGAATAACTGCACCCTGTGAA 57.500 42.857 0.00 0.00 35.23 3.18
309 314 3.146066 TGAATAACTGCACCCTGTGAAC 58.854 45.455 0.00 0.00 35.23 3.18
310 315 3.181445 TGAATAACTGCACCCTGTGAACT 60.181 43.478 0.00 0.00 35.23 3.01
311 316 2.543777 TAACTGCACCCTGTGAACTC 57.456 50.000 0.00 0.00 35.23 3.01
346 355 1.643880 GCTGGCAAAATGATTTCCCG 58.356 50.000 0.00 0.00 0.00 5.14
349 358 2.493278 CTGGCAAAATGATTTCCCGACT 59.507 45.455 0.00 0.00 0.00 4.18
351 360 3.056891 TGGCAAAATGATTTCCCGACTTC 60.057 43.478 0.00 0.00 0.00 3.01
365 374 1.537202 CGACTTCCTTTCTTGCCCAAG 59.463 52.381 1.62 1.62 39.71 3.61
396 405 6.747280 GCCACAAGTACTAACTAATTTGCATG 59.253 38.462 0.00 0.00 33.75 4.06
439 448 9.660544 ATCTTATTAATTAGGTGCCTCCAAATT 57.339 29.630 1.84 0.00 39.02 1.82
448 457 4.079253 GGTGCCTCCAAATTAGTTCTCAA 58.921 43.478 0.00 0.00 35.97 3.02
449 458 4.522789 GGTGCCTCCAAATTAGTTCTCAAA 59.477 41.667 0.00 0.00 35.97 2.69
450 459 5.185828 GGTGCCTCCAAATTAGTTCTCAAAT 59.814 40.000 0.00 0.00 35.97 2.32
451 460 6.295292 GGTGCCTCCAAATTAGTTCTCAAATT 60.295 38.462 0.00 0.00 35.97 1.82
452 461 7.093945 GGTGCCTCCAAATTAGTTCTCAAATTA 60.094 37.037 0.00 0.00 35.97 1.40
455 464 9.705290 GCCTCCAAATTAGTTCTCAAATTAAAA 57.295 29.630 0.00 0.00 0.00 1.52
496 505 1.433879 CCGAGGACGTGACTGGATC 59.566 63.158 0.00 0.00 37.88 3.36
509 518 0.870393 CTGGATCGCATACACATGGC 59.130 55.000 0.00 0.00 32.36 4.40
513 522 1.797046 GATCGCATACACATGGCTCTG 59.203 52.381 0.00 0.00 32.36 3.35
546 555 6.017933 GCTTTCTGTGTACGATTCAGAATTG 58.982 40.000 16.95 8.68 44.15 2.32
591 600 2.856032 CGGAACTGCTTGCGTCAG 59.144 61.111 0.00 0.00 36.54 3.51
609 1096 5.798934 GCGTCAGTTCTATCTCGTTTCTTTA 59.201 40.000 0.00 0.00 0.00 1.85
659 1153 2.675348 CAGGCTCTGCTTGCTACTTAAC 59.325 50.000 0.00 0.00 0.00 2.01
660 1154 2.010497 GGCTCTGCTTGCTACTTAACC 58.990 52.381 0.00 0.00 0.00 2.85
701 1908 0.752743 TAATGATGTGGCCTGCCTGC 60.753 55.000 9.97 3.23 36.94 4.85
810 2359 6.210287 ACACAAGTTTTGGACGGATAAAAA 57.790 33.333 0.00 0.00 34.12 1.94
832 2386 8.891671 AAAAATTGCACAAAGTTCATCAGTAT 57.108 26.923 0.00 0.00 0.00 2.12
833 2387 9.979578 AAAAATTGCACAAAGTTCATCAGTATA 57.020 25.926 0.00 0.00 0.00 1.47
860 2416 9.952188 TTATTCTTCGTAATGAGTATCTGTCAG 57.048 33.333 0.00 0.00 34.92 3.51
862 2418 7.017498 TCTTCGTAATGAGTATCTGTCAGAC 57.983 40.000 4.21 0.00 34.92 3.51
863 2419 6.598064 TCTTCGTAATGAGTATCTGTCAGACA 59.402 38.462 4.21 2.48 34.92 3.41
866 2422 5.968261 CGTAATGAGTATCTGTCAGACAGTG 59.032 44.000 26.65 6.94 46.03 3.66
890 2450 4.248691 TCTCCATCTATCTTCACATGCG 57.751 45.455 0.00 0.00 0.00 4.73
893 2453 3.132824 TCCATCTATCTTCACATGCGTGT 59.867 43.478 5.51 5.51 44.02 4.49
991 2560 5.711506 TGATGATTGGTACAGCTGAATTTGT 59.288 36.000 23.35 0.00 42.39 2.83
1053 2622 3.843027 AGATTCTCAACAGGATCACCAGT 59.157 43.478 0.00 0.00 37.12 4.00
1058 2627 3.997021 CTCAACAGGATCACCAGTACAAC 59.003 47.826 0.00 0.00 34.83 3.32
1616 3538 2.751806 GGATGAAGCTCCAGAAGTTTGG 59.248 50.000 0.00 0.00 39.70 3.28
1620 3542 2.278332 AGCTCCAGAAGTTTGGGTTC 57.722 50.000 4.81 0.00 38.81 3.62
1621 3543 1.202940 AGCTCCAGAAGTTTGGGTTCC 60.203 52.381 4.81 0.00 38.81 3.62
1835 3763 3.394674 TTGCCTTGAGTATGTTCGTGA 57.605 42.857 0.00 0.00 0.00 4.35
1894 3823 2.627221 TGCAGCAACCTTAAAAGCATCA 59.373 40.909 0.00 0.00 0.00 3.07
1923 3852 2.125912 AACCTGCAGCGCTACTCG 60.126 61.111 10.99 0.00 42.12 4.18
2035 3964 8.170730 TGATAGACCTCAGCTTTATAGGATGTA 58.829 37.037 7.91 0.00 34.34 2.29
2214 4143 3.561310 AGCTTATATTGTGTCATGCGGTG 59.439 43.478 0.00 0.00 0.00 4.94
2285 4214 4.108336 CTCACACTTCGGATGTGTCATAG 58.892 47.826 22.35 16.64 45.56 2.23
2359 4288 2.521126 TGGTCATCGAGTCTTGTGGTA 58.479 47.619 0.00 0.00 0.00 3.25
2552 4510 0.330604 ACAAGGCTGTGCATCATCCT 59.669 50.000 6.03 6.03 43.57 3.24
2702 4688 5.522460 CCACTTGTGTATTACTATCAACCGG 59.478 44.000 0.00 0.00 0.00 5.28
2960 5078 3.135994 AGTTTCCACGGACATGTACAAC 58.864 45.455 9.21 4.51 0.00 3.32
3062 5247 6.382869 AAATGACTTGAAGTTGAGGAACAG 57.617 37.500 0.00 0.00 34.17 3.16
3088 5305 7.195374 TGAAACTACTGAAGGCCTATAACAT 57.805 36.000 5.16 0.00 0.00 2.71
3089 5306 8.313944 TGAAACTACTGAAGGCCTATAACATA 57.686 34.615 5.16 0.00 0.00 2.29
3090 5307 8.202137 TGAAACTACTGAAGGCCTATAACATAC 58.798 37.037 5.16 0.00 0.00 2.39
3091 5308 7.916077 AACTACTGAAGGCCTATAACATACT 57.084 36.000 5.16 0.00 0.00 2.12
3092 5309 7.527568 ACTACTGAAGGCCTATAACATACTC 57.472 40.000 5.16 0.00 0.00 2.59
3093 5310 5.810080 ACTGAAGGCCTATAACATACTCC 57.190 43.478 5.16 0.00 0.00 3.85
3094 5311 4.593634 ACTGAAGGCCTATAACATACTCCC 59.406 45.833 5.16 0.00 0.00 4.30
3095 5312 4.827789 TGAAGGCCTATAACATACTCCCT 58.172 43.478 5.16 0.00 0.00 4.20
3096 5313 4.838986 TGAAGGCCTATAACATACTCCCTC 59.161 45.833 5.16 0.00 0.00 4.30
3097 5314 3.792515 AGGCCTATAACATACTCCCTCC 58.207 50.000 1.29 0.00 0.00 4.30
3098 5315 2.496470 GGCCTATAACATACTCCCTCCG 59.504 54.545 0.00 0.00 0.00 4.63
3099 5316 3.163467 GCCTATAACATACTCCCTCCGT 58.837 50.000 0.00 0.00 0.00 4.69
3100 5317 3.577415 GCCTATAACATACTCCCTCCGTT 59.423 47.826 0.00 0.00 0.00 4.44
3101 5318 4.321824 GCCTATAACATACTCCCTCCGTTC 60.322 50.000 0.00 0.00 0.00 3.95
3102 5319 5.078256 CCTATAACATACTCCCTCCGTTCT 58.922 45.833 0.00 0.00 0.00 3.01
3103 5320 6.243900 CCTATAACATACTCCCTCCGTTCTA 58.756 44.000 0.00 0.00 0.00 2.10
3104 5321 6.718454 CCTATAACATACTCCCTCCGTTCTAA 59.282 42.308 0.00 0.00 0.00 2.10
3105 5322 7.232127 CCTATAACATACTCCCTCCGTTCTAAA 59.768 40.741 0.00 0.00 0.00 1.85
3106 5323 5.750352 AACATACTCCCTCCGTTCTAAAA 57.250 39.130 0.00 0.00 0.00 1.52
3107 5324 5.952347 ACATACTCCCTCCGTTCTAAAAT 57.048 39.130 0.00 0.00 0.00 1.82
3108 5325 7.427989 AACATACTCCCTCCGTTCTAAAATA 57.572 36.000 0.00 0.00 0.00 1.40
3109 5326 7.052142 ACATACTCCCTCCGTTCTAAAATAG 57.948 40.000 0.00 0.00 0.00 1.73
3110 5327 6.837568 ACATACTCCCTCCGTTCTAAAATAGA 59.162 38.462 0.00 0.00 0.00 1.98
3111 5328 7.509659 ACATACTCCCTCCGTTCTAAAATAGAT 59.490 37.037 0.00 0.00 34.22 1.98
3112 5329 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
3113 5330 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
3114 5331 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
3115 5332 5.070047 TCCCTCCGTTCTAAAATAGATGACC 59.930 44.000 0.00 0.00 34.22 4.02
3116 5333 5.298347 CCTCCGTTCTAAAATAGATGACCC 58.702 45.833 0.00 0.00 34.22 4.46
3117 5334 5.163343 CCTCCGTTCTAAAATAGATGACCCA 60.163 44.000 0.00 0.00 34.22 4.51
3118 5335 6.302535 TCCGTTCTAAAATAGATGACCCAA 57.697 37.500 0.00 0.00 34.22 4.12
3119 5336 6.110707 TCCGTTCTAAAATAGATGACCCAAC 58.889 40.000 0.00 0.00 34.22 3.77
3120 5337 6.070424 TCCGTTCTAAAATAGATGACCCAACT 60.070 38.462 0.00 0.00 34.22 3.16
3121 5338 6.598064 CCGTTCTAAAATAGATGACCCAACTT 59.402 38.462 0.00 0.00 34.22 2.66
3122 5339 7.120726 CCGTTCTAAAATAGATGACCCAACTTT 59.879 37.037 0.00 0.00 34.22 2.66
3123 5340 7.962918 CGTTCTAAAATAGATGACCCAACTTTG 59.037 37.037 0.00 0.00 34.22 2.77
3124 5341 8.793592 GTTCTAAAATAGATGACCCAACTTTGT 58.206 33.333 0.00 0.00 34.22 2.83
3126 5343 9.444600 TCTAAAATAGATGACCCAACTTTGTAC 57.555 33.333 0.00 0.00 0.00 2.90
3127 5344 9.449719 CTAAAATAGATGACCCAACTTTGTACT 57.550 33.333 0.00 0.00 0.00 2.73
3129 5346 9.449719 AAAATAGATGACCCAACTTTGTACTAG 57.550 33.333 0.00 0.00 0.00 2.57
3130 5347 4.833390 AGATGACCCAACTTTGTACTAGC 58.167 43.478 0.00 0.00 0.00 3.42
3131 5348 4.532521 AGATGACCCAACTTTGTACTAGCT 59.467 41.667 0.00 0.00 0.00 3.32
3132 5349 4.699925 TGACCCAACTTTGTACTAGCTT 57.300 40.909 0.00 0.00 0.00 3.74
3133 5350 5.043737 TGACCCAACTTTGTACTAGCTTT 57.956 39.130 0.00 0.00 0.00 3.51
3134 5351 4.819630 TGACCCAACTTTGTACTAGCTTTG 59.180 41.667 0.00 0.00 0.00 2.77
3135 5352 4.788679 ACCCAACTTTGTACTAGCTTTGT 58.211 39.130 0.00 0.00 0.00 2.83
3136 5353 5.932455 ACCCAACTTTGTACTAGCTTTGTA 58.068 37.500 0.00 0.00 0.00 2.41
3137 5354 5.761726 ACCCAACTTTGTACTAGCTTTGTAC 59.238 40.000 17.52 17.52 40.27 2.90
3138 5355 5.995897 CCCAACTTTGTACTAGCTTTGTACT 59.004 40.000 21.94 7.09 40.44 2.73
3139 5356 7.156673 CCCAACTTTGTACTAGCTTTGTACTA 58.843 38.462 21.94 15.68 40.44 1.82
3140 5357 7.658575 CCCAACTTTGTACTAGCTTTGTACTAA 59.341 37.037 21.94 19.81 40.44 2.24
3141 5358 9.048446 CCAACTTTGTACTAGCTTTGTACTAAA 57.952 33.333 21.94 18.77 40.44 1.85
3160 5377 6.465084 ACTAAAGCTAGTACAAAGTTGAGGG 58.535 40.000 0.00 0.00 36.56 4.30
3161 5378 5.562298 AAAGCTAGTACAAAGTTGAGGGA 57.438 39.130 0.00 0.00 0.00 4.20
3162 5379 4.810191 AGCTAGTACAAAGTTGAGGGAG 57.190 45.455 0.00 0.00 0.00 4.30
3191 5412 5.128171 TGTGTGCTAATTACAGGTAGGTAGG 59.872 44.000 0.00 0.00 0.00 3.18
3333 5569 6.102321 AGACACCATTTGAGGGATGAGATATT 59.898 38.462 0.00 0.00 0.00 1.28
3344 5580 6.416415 AGGGATGAGATATTGAGATTCATGC 58.584 40.000 0.00 0.00 36.33 4.06
3416 5681 1.802960 CTCGTTGCATCAGTTCAGCTT 59.197 47.619 0.00 0.00 0.00 3.74
3418 5683 1.400629 CGTTGCATCAGTTCAGCTTGG 60.401 52.381 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.308401 AGTTCACAGGGCCAATCTTTTT 58.692 40.909 6.18 0.00 0.00 1.94
22 23 2.893489 GAGTTCACAGGGCCAATCTTTT 59.107 45.455 6.18 0.00 0.00 2.27
23 24 2.158475 TGAGTTCACAGGGCCAATCTTT 60.158 45.455 6.18 0.00 0.00 2.52
24 25 1.425066 TGAGTTCACAGGGCCAATCTT 59.575 47.619 6.18 0.00 0.00 2.40
70 71 5.105716 GGGCAAGAAAGAAAGTAGGGAAATC 60.106 44.000 0.00 0.00 0.00 2.17
71 72 4.772624 GGGCAAGAAAGAAAGTAGGGAAAT 59.227 41.667 0.00 0.00 0.00 2.17
72 73 4.149598 GGGCAAGAAAGAAAGTAGGGAAA 58.850 43.478 0.00 0.00 0.00 3.13
73 74 3.139397 TGGGCAAGAAAGAAAGTAGGGAA 59.861 43.478 0.00 0.00 0.00 3.97
75 76 3.154827 TGGGCAAGAAAGAAAGTAGGG 57.845 47.619 0.00 0.00 0.00 3.53
76 77 3.255888 GGTTGGGCAAGAAAGAAAGTAGG 59.744 47.826 0.00 0.00 0.00 3.18
77 78 3.888930 TGGTTGGGCAAGAAAGAAAGTAG 59.111 43.478 0.00 0.00 0.00 2.57
95 96 4.102681 AGTTAGTACTTGCAGGTCTTGGTT 59.897 41.667 4.04 0.00 0.00 3.67
183 188 4.265073 AGCTAGAATTGACGGAAGCAATT 58.735 39.130 0.00 0.00 44.44 2.32
184 189 3.873952 GAGCTAGAATTGACGGAAGCAAT 59.126 43.478 0.00 0.00 38.72 3.56
185 190 3.262420 GAGCTAGAATTGACGGAAGCAA 58.738 45.455 0.00 0.00 32.42 3.91
186 191 2.233676 TGAGCTAGAATTGACGGAAGCA 59.766 45.455 0.00 0.00 32.42 3.91
187 192 2.893637 TGAGCTAGAATTGACGGAAGC 58.106 47.619 0.00 0.00 0.00 3.86
188 193 7.439356 TGAATAATGAGCTAGAATTGACGGAAG 59.561 37.037 0.00 0.00 0.00 3.46
189 194 7.272244 TGAATAATGAGCTAGAATTGACGGAA 58.728 34.615 0.00 0.00 0.00 4.30
190 195 6.816136 TGAATAATGAGCTAGAATTGACGGA 58.184 36.000 0.00 0.00 0.00 4.69
191 196 6.146837 CCTGAATAATGAGCTAGAATTGACGG 59.853 42.308 0.00 0.00 0.00 4.79
192 197 6.347240 GCCTGAATAATGAGCTAGAATTGACG 60.347 42.308 0.00 0.00 0.00 4.35
193 198 6.709846 AGCCTGAATAATGAGCTAGAATTGAC 59.290 38.462 0.00 0.00 30.46 3.18
194 199 6.835174 AGCCTGAATAATGAGCTAGAATTGA 58.165 36.000 0.00 0.00 30.46 2.57
195 200 6.935771 AGAGCCTGAATAATGAGCTAGAATTG 59.064 38.462 0.00 0.00 32.97 2.32
196 201 6.935771 CAGAGCCTGAATAATGAGCTAGAATT 59.064 38.462 0.00 0.00 32.97 2.17
197 202 6.465948 CAGAGCCTGAATAATGAGCTAGAAT 58.534 40.000 0.00 0.00 32.97 2.40
198 203 5.741383 GCAGAGCCTGAATAATGAGCTAGAA 60.741 44.000 6.40 0.00 32.97 2.10
199 204 4.262377 GCAGAGCCTGAATAATGAGCTAGA 60.262 45.833 6.40 0.00 32.97 2.43
200 205 3.995705 GCAGAGCCTGAATAATGAGCTAG 59.004 47.826 6.40 0.00 32.97 3.42
201 206 3.645212 AGCAGAGCCTGAATAATGAGCTA 59.355 43.478 6.40 0.00 32.97 3.32
202 207 2.438763 AGCAGAGCCTGAATAATGAGCT 59.561 45.455 6.40 0.00 36.25 4.09
203 208 2.848691 AGCAGAGCCTGAATAATGAGC 58.151 47.619 6.40 0.00 32.44 4.26
204 209 5.212532 AGTAGCAGAGCCTGAATAATGAG 57.787 43.478 6.40 0.00 32.44 2.90
205 210 5.620738 AAGTAGCAGAGCCTGAATAATGA 57.379 39.130 6.40 0.00 32.44 2.57
206 211 7.658982 TGATTAAGTAGCAGAGCCTGAATAATG 59.341 37.037 6.40 0.00 32.44 1.90
207 212 7.739825 TGATTAAGTAGCAGAGCCTGAATAAT 58.260 34.615 6.40 3.57 32.44 1.28
208 213 7.124573 TGATTAAGTAGCAGAGCCTGAATAA 57.875 36.000 6.40 0.00 32.44 1.40
209 214 6.731292 TGATTAAGTAGCAGAGCCTGAATA 57.269 37.500 6.40 0.00 32.44 1.75
210 215 5.620738 TGATTAAGTAGCAGAGCCTGAAT 57.379 39.130 6.40 0.00 32.44 2.57
211 216 5.420725 TTGATTAAGTAGCAGAGCCTGAA 57.579 39.130 6.40 0.00 32.44 3.02
212 217 4.141846 CCTTGATTAAGTAGCAGAGCCTGA 60.142 45.833 6.40 0.00 30.58 3.86
213 218 4.125703 CCTTGATTAAGTAGCAGAGCCTG 58.874 47.826 0.00 0.00 31.80 4.85
214 219 3.777522 ACCTTGATTAAGTAGCAGAGCCT 59.222 43.478 0.00 0.00 31.80 4.58
215 220 3.873952 CACCTTGATTAAGTAGCAGAGCC 59.126 47.826 0.00 0.00 31.80 4.70
216 221 3.873952 CCACCTTGATTAAGTAGCAGAGC 59.126 47.826 0.00 0.00 31.80 4.09
217 222 3.873952 GCCACCTTGATTAAGTAGCAGAG 59.126 47.826 0.00 0.00 31.80 3.35
218 223 3.263170 TGCCACCTTGATTAAGTAGCAGA 59.737 43.478 0.00 0.00 31.68 4.26
219 224 3.609853 TGCCACCTTGATTAAGTAGCAG 58.390 45.455 0.00 0.00 31.68 4.24
220 225 3.609853 CTGCCACCTTGATTAAGTAGCA 58.390 45.455 0.00 1.97 33.25 3.49
221 226 2.356069 GCTGCCACCTTGATTAAGTAGC 59.644 50.000 0.00 0.00 31.80 3.58
222 227 3.878778 AGCTGCCACCTTGATTAAGTAG 58.121 45.455 0.00 0.00 31.80 2.57
223 228 4.469945 ACTAGCTGCCACCTTGATTAAGTA 59.530 41.667 0.00 0.00 31.80 2.24
224 229 2.887151 AGCTGCCACCTTGATTAAGT 57.113 45.000 0.00 0.00 31.80 2.24
225 230 3.878778 ACTAGCTGCCACCTTGATTAAG 58.121 45.455 0.00 0.00 0.00 1.85
226 231 4.301072 AACTAGCTGCCACCTTGATTAA 57.699 40.909 0.00 0.00 0.00 1.40
227 232 4.301072 AAACTAGCTGCCACCTTGATTA 57.699 40.909 0.00 0.00 0.00 1.75
228 233 2.887151 AACTAGCTGCCACCTTGATT 57.113 45.000 0.00 0.00 0.00 2.57
229 234 2.887151 AAACTAGCTGCCACCTTGAT 57.113 45.000 0.00 0.00 0.00 2.57
230 235 3.780804 TTAAACTAGCTGCCACCTTGA 57.219 42.857 0.00 0.00 0.00 3.02
231 236 5.391312 AAATTAAACTAGCTGCCACCTTG 57.609 39.130 0.00 0.00 0.00 3.61
232 237 7.396055 TCATTAAATTAAACTAGCTGCCACCTT 59.604 33.333 0.00 0.00 0.00 3.50
233 238 6.889722 TCATTAAATTAAACTAGCTGCCACCT 59.110 34.615 0.00 0.00 0.00 4.00
234 239 7.095695 TCATTAAATTAAACTAGCTGCCACC 57.904 36.000 0.00 0.00 0.00 4.61
235 240 8.190784 ACATCATTAAATTAAACTAGCTGCCAC 58.809 33.333 0.00 0.00 0.00 5.01
236 241 8.190122 CACATCATTAAATTAAACTAGCTGCCA 58.810 33.333 0.00 0.00 0.00 4.92
237 242 7.649306 CCACATCATTAAATTAAACTAGCTGCC 59.351 37.037 0.00 0.00 0.00 4.85
238 243 7.168135 GCCACATCATTAAATTAAACTAGCTGC 59.832 37.037 0.00 0.00 0.00 5.25
239 244 8.190122 TGCCACATCATTAAATTAAACTAGCTG 58.810 33.333 0.00 0.00 0.00 4.24
240 245 8.292444 TGCCACATCATTAAATTAAACTAGCT 57.708 30.769 0.00 0.00 0.00 3.32
241 246 8.405531 TCTGCCACATCATTAAATTAAACTAGC 58.594 33.333 0.00 0.00 0.00 3.42
252 257 9.154847 CGAATCTAATATCTGCCACATCATTAA 57.845 33.333 0.00 0.00 0.00 1.40
253 258 8.314021 ACGAATCTAATATCTGCCACATCATTA 58.686 33.333 0.00 0.00 0.00 1.90
254 259 7.118825 CACGAATCTAATATCTGCCACATCATT 59.881 37.037 0.00 0.00 0.00 2.57
255 260 6.592994 CACGAATCTAATATCTGCCACATCAT 59.407 38.462 0.00 0.00 0.00 2.45
256 261 5.928264 CACGAATCTAATATCTGCCACATCA 59.072 40.000 0.00 0.00 0.00 3.07
257 262 5.928839 ACACGAATCTAATATCTGCCACATC 59.071 40.000 0.00 0.00 0.00 3.06
258 263 5.858381 ACACGAATCTAATATCTGCCACAT 58.142 37.500 0.00 0.00 0.00 3.21
259 264 5.276461 ACACGAATCTAATATCTGCCACA 57.724 39.130 0.00 0.00 0.00 4.17
260 265 7.815068 AGATAACACGAATCTAATATCTGCCAC 59.185 37.037 0.00 0.00 31.88 5.01
261 266 7.896811 AGATAACACGAATCTAATATCTGCCA 58.103 34.615 0.00 0.00 31.88 4.92
272 277 9.197694 GCAGTTATTCATAGATAACACGAATCT 57.802 33.333 9.60 0.00 42.33 2.40
273 278 8.978539 TGCAGTTATTCATAGATAACACGAATC 58.021 33.333 9.60 0.00 42.33 2.52
274 279 8.765219 GTGCAGTTATTCATAGATAACACGAAT 58.235 33.333 9.60 0.00 42.33 3.34
275 280 7.223971 GGTGCAGTTATTCATAGATAACACGAA 59.776 37.037 9.60 0.00 42.33 3.85
276 281 6.700081 GGTGCAGTTATTCATAGATAACACGA 59.300 38.462 9.60 0.00 42.33 4.35
277 282 6.073765 GGGTGCAGTTATTCATAGATAACACG 60.074 42.308 9.60 3.05 42.33 4.49
278 283 6.992715 AGGGTGCAGTTATTCATAGATAACAC 59.007 38.462 9.60 0.00 42.33 3.32
279 284 6.992123 CAGGGTGCAGTTATTCATAGATAACA 59.008 38.462 9.60 0.00 42.33 2.41
280 285 6.992715 ACAGGGTGCAGTTATTCATAGATAAC 59.007 38.462 0.00 0.00 40.93 1.89
281 286 6.992123 CACAGGGTGCAGTTATTCATAGATAA 59.008 38.462 0.00 0.00 0.00 1.75
282 287 6.326323 TCACAGGGTGCAGTTATTCATAGATA 59.674 38.462 0.00 0.00 32.98 1.98
283 288 5.130975 TCACAGGGTGCAGTTATTCATAGAT 59.869 40.000 0.00 0.00 32.98 1.98
284 289 4.469586 TCACAGGGTGCAGTTATTCATAGA 59.530 41.667 0.00 0.00 32.98 1.98
285 290 4.769688 TCACAGGGTGCAGTTATTCATAG 58.230 43.478 0.00 0.00 32.98 2.23
286 291 4.835284 TCACAGGGTGCAGTTATTCATA 57.165 40.909 0.00 0.00 32.98 2.15
287 292 3.719268 TCACAGGGTGCAGTTATTCAT 57.281 42.857 0.00 0.00 32.98 2.57
288 293 3.146066 GTTCACAGGGTGCAGTTATTCA 58.854 45.455 0.00 0.00 32.98 2.57
289 294 3.412386 AGTTCACAGGGTGCAGTTATTC 58.588 45.455 0.00 0.00 32.98 1.75
290 295 3.181445 TGAGTTCACAGGGTGCAGTTATT 60.181 43.478 0.00 0.00 32.98 1.40
291 296 2.371841 TGAGTTCACAGGGTGCAGTTAT 59.628 45.455 0.00 0.00 32.98 1.89
292 297 1.765904 TGAGTTCACAGGGTGCAGTTA 59.234 47.619 0.00 0.00 32.98 2.24
293 298 0.546122 TGAGTTCACAGGGTGCAGTT 59.454 50.000 0.00 0.00 32.98 3.16
294 299 0.546122 TTGAGTTCACAGGGTGCAGT 59.454 50.000 0.00 0.00 32.98 4.40
295 300 0.947244 GTTGAGTTCACAGGGTGCAG 59.053 55.000 0.00 0.00 32.98 4.41
296 301 0.546122 AGTTGAGTTCACAGGGTGCA 59.454 50.000 0.00 0.00 32.98 4.57
297 302 1.230324 GAGTTGAGTTCACAGGGTGC 58.770 55.000 0.00 0.00 32.98 5.01
298 303 2.620251 TGAGTTGAGTTCACAGGGTG 57.380 50.000 0.00 0.00 34.45 4.61
299 304 2.289072 CGATGAGTTGAGTTCACAGGGT 60.289 50.000 0.00 0.00 0.00 4.34
300 305 2.341257 CGATGAGTTGAGTTCACAGGG 58.659 52.381 0.00 0.00 0.00 4.45
301 306 2.341257 CCGATGAGTTGAGTTCACAGG 58.659 52.381 0.00 0.00 0.00 4.00
302 307 1.728971 GCCGATGAGTTGAGTTCACAG 59.271 52.381 0.00 0.00 0.00 3.66
303 308 1.344438 AGCCGATGAGTTGAGTTCACA 59.656 47.619 0.00 0.00 0.00 3.58
304 309 1.728971 CAGCCGATGAGTTGAGTTCAC 59.271 52.381 0.00 0.00 0.00 3.18
305 310 1.344438 ACAGCCGATGAGTTGAGTTCA 59.656 47.619 0.00 0.00 0.00 3.18
306 311 1.728971 CACAGCCGATGAGTTGAGTTC 59.271 52.381 0.00 0.00 0.00 3.01
307 312 1.609061 CCACAGCCGATGAGTTGAGTT 60.609 52.381 0.00 0.00 0.00 3.01
308 313 0.036952 CCACAGCCGATGAGTTGAGT 60.037 55.000 0.00 0.00 0.00 3.41
309 314 1.364626 GCCACAGCCGATGAGTTGAG 61.365 60.000 0.00 0.00 0.00 3.02
310 315 1.375908 GCCACAGCCGATGAGTTGA 60.376 57.895 0.00 0.00 0.00 3.18
311 316 1.376424 AGCCACAGCCGATGAGTTG 60.376 57.895 0.00 0.00 41.25 3.16
346 355 1.270826 GCTTGGGCAAGAAAGGAAGTC 59.729 52.381 0.00 0.00 40.79 3.01
349 358 3.529948 TGCTTGGGCAAGAAAGGAA 57.470 47.368 0.00 0.00 46.36 3.36
365 374 1.136057 GTTAGTACTTGTGGCGCTTGC 60.136 52.381 7.64 0.00 38.11 4.01
370 379 5.106869 TGCAAATTAGTTAGTACTTGTGGCG 60.107 40.000 0.00 0.00 35.78 5.69
466 475 0.103937 GTCCTCGGGCTGAATCTGAG 59.896 60.000 0.00 0.00 37.38 3.35
479 488 1.062685 CGATCCAGTCACGTCCTCG 59.937 63.158 0.00 0.00 43.34 4.63
480 489 1.226717 GCGATCCAGTCACGTCCTC 60.227 63.158 0.00 0.00 0.00 3.71
481 490 1.323271 ATGCGATCCAGTCACGTCCT 61.323 55.000 0.00 0.00 0.00 3.85
496 505 1.645455 GCAGAGCCATGTGTATGCG 59.355 57.895 0.00 0.00 32.79 4.73
534 543 4.260375 CGGGCTTACTTCAATTCTGAATCG 60.260 45.833 2.92 0.00 40.78 3.34
535 544 4.876107 TCGGGCTTACTTCAATTCTGAATC 59.124 41.667 2.92 0.00 40.78 2.52
546 555 1.447314 CCACGGTCGGGCTTACTTC 60.447 63.158 0.00 0.00 0.00 3.01
625 1112 4.286549 AGCAGAGCCTGAATAATGAGCTAT 59.713 41.667 6.40 0.00 32.97 2.97
629 1116 3.003482 GCAAGCAGAGCCTGAATAATGAG 59.997 47.826 6.40 0.00 32.44 2.90
659 1153 6.515272 AAATCAAACTAGCTAACACCATGG 57.485 37.500 11.19 11.19 0.00 3.66
660 1154 9.507280 CATTAAATCAAACTAGCTAACACCATG 57.493 33.333 0.00 0.00 0.00 3.66
860 2416 7.013750 TGTGAAGATAGATGGAGATACACTGTC 59.986 40.741 0.00 0.00 0.00 3.51
862 2418 7.282332 TGTGAAGATAGATGGAGATACACTG 57.718 40.000 0.00 0.00 0.00 3.66
863 2419 7.525194 GCATGTGAAGATAGATGGAGATACACT 60.525 40.741 0.00 0.00 0.00 3.55
864 2420 6.589523 GCATGTGAAGATAGATGGAGATACAC 59.410 42.308 0.00 0.00 0.00 2.90
866 2422 5.804473 CGCATGTGAAGATAGATGGAGATAC 59.196 44.000 0.00 0.00 0.00 2.24
912 2477 8.352942 ACCAAATTAAGAGCTGAACTAAAACTG 58.647 33.333 0.00 0.00 0.00 3.16
925 2490 7.042725 GGTTCAGAAAACAACCAAATTAAGAGC 60.043 37.037 0.00 0.00 41.65 4.09
931 2500 6.706295 TCAAGGTTCAGAAAACAACCAAATT 58.294 32.000 3.77 0.00 44.10 1.82
932 2501 6.293004 TCAAGGTTCAGAAAACAACCAAAT 57.707 33.333 3.77 0.00 44.10 2.32
991 2560 3.194968 GGTAGGTCTTCCATCGAACAGAA 59.805 47.826 0.00 0.00 35.89 3.02
1053 2622 6.295349 GGGAAAGAGAGTTCAGATCAGTTGTA 60.295 42.308 0.00 0.00 0.00 2.41
1058 2627 5.177326 CAAGGGAAAGAGAGTTCAGATCAG 58.823 45.833 0.00 0.00 0.00 2.90
1616 3538 3.790089 TTCCTCTTTTCCTCTGGAACC 57.210 47.619 0.00 0.00 41.87 3.62
1620 3542 7.997803 AGATCATATTTTCCTCTTTTCCTCTGG 59.002 37.037 0.00 0.00 0.00 3.86
1621 3543 8.977267 AGATCATATTTTCCTCTTTTCCTCTG 57.023 34.615 0.00 0.00 0.00 3.35
1858 3787 2.169978 TGCTGCAGCTCTGAGATAATGT 59.830 45.455 36.61 0.00 42.66 2.71
1894 3823 0.395586 TGCAGGTTGAGCCAAAGTGT 60.396 50.000 0.00 0.00 40.61 3.55
1923 3852 5.578727 GGTCTCACAATAGTTGACATCACTC 59.421 44.000 0.00 0.00 33.08 3.51
2035 3964 0.622136 TCTGATGGCCAGTCAGCATT 59.378 50.000 27.24 5.72 42.17 3.56
2185 4114 4.112634 TGACACAATATAAGCTCGAGTGC 58.887 43.478 15.13 0.56 0.00 4.40
2214 4143 2.969238 CGCATCCCGGCATCAGTC 60.969 66.667 0.00 0.00 0.00 3.51
2285 4214 1.732259 CCACTCCAACATCAGTAACGC 59.268 52.381 0.00 0.00 0.00 4.84
2359 4288 0.321475 GCAGCTTGCAGAGAGACCTT 60.321 55.000 3.64 0.00 44.26 3.50
2552 4510 5.580998 AGTCCAGACAAGTGAATCTAGGTA 58.419 41.667 0.00 0.00 0.00 3.08
2702 4688 5.948992 ACAGAGTTAAGCAACCAGAATTC 57.051 39.130 0.00 0.00 35.05 2.17
3046 5231 3.558931 TCAGCTGTTCCTCAACTTCAA 57.441 42.857 14.67 0.00 33.17 2.69
3062 5247 2.481289 AGGCCTTCAGTAGTTTCAGC 57.519 50.000 0.00 0.00 0.00 4.26
3088 5305 7.014038 GTCATCTATTTTAGAACGGAGGGAGTA 59.986 40.741 0.00 0.00 38.50 2.59
3089 5306 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
3090 5307 6.217294 GTCATCTATTTTAGAACGGAGGGAG 58.783 44.000 0.00 0.00 38.50 4.30
3091 5308 5.070047 GGTCATCTATTTTAGAACGGAGGGA 59.930 44.000 0.00 0.00 38.50 4.20
3092 5309 5.298347 GGTCATCTATTTTAGAACGGAGGG 58.702 45.833 0.00 0.00 38.50 4.30
3093 5310 5.163343 TGGGTCATCTATTTTAGAACGGAGG 60.163 44.000 0.00 0.00 38.50 4.30
3094 5311 5.914033 TGGGTCATCTATTTTAGAACGGAG 58.086 41.667 0.00 0.00 38.50 4.63
3095 5312 5.943349 TGGGTCATCTATTTTAGAACGGA 57.057 39.130 0.00 0.00 38.50 4.69
3096 5313 6.113411 AGTTGGGTCATCTATTTTAGAACGG 58.887 40.000 0.00 0.00 38.50 4.44
3097 5314 7.611213 AAGTTGGGTCATCTATTTTAGAACG 57.389 36.000 0.00 0.00 38.50 3.95
3098 5315 8.793592 ACAAAGTTGGGTCATCTATTTTAGAAC 58.206 33.333 0.00 0.00 38.50 3.01
3099 5316 8.934023 ACAAAGTTGGGTCATCTATTTTAGAA 57.066 30.769 0.00 0.00 38.50 2.10
3100 5317 9.444600 GTACAAAGTTGGGTCATCTATTTTAGA 57.555 33.333 0.00 0.00 39.50 2.10
3101 5318 9.449719 AGTACAAAGTTGGGTCATCTATTTTAG 57.550 33.333 0.00 0.00 0.00 1.85
3103 5320 9.449719 CTAGTACAAAGTTGGGTCATCTATTTT 57.550 33.333 0.00 0.00 0.00 1.82
3104 5321 7.553044 GCTAGTACAAAGTTGGGTCATCTATTT 59.447 37.037 0.00 0.00 0.00 1.40
3105 5322 7.048512 GCTAGTACAAAGTTGGGTCATCTATT 58.951 38.462 0.00 0.00 0.00 1.73
3106 5323 6.384305 AGCTAGTACAAAGTTGGGTCATCTAT 59.616 38.462 0.00 0.00 0.00 1.98
3107 5324 5.720041 AGCTAGTACAAAGTTGGGTCATCTA 59.280 40.000 0.00 0.00 0.00 1.98
3108 5325 4.532521 AGCTAGTACAAAGTTGGGTCATCT 59.467 41.667 0.00 0.00 0.00 2.90
3109 5326 4.833390 AGCTAGTACAAAGTTGGGTCATC 58.167 43.478 0.00 0.00 0.00 2.92
3110 5327 4.910458 AGCTAGTACAAAGTTGGGTCAT 57.090 40.909 0.00 0.00 0.00 3.06
3111 5328 4.699925 AAGCTAGTACAAAGTTGGGTCA 57.300 40.909 0.00 0.00 0.00 4.02
3112 5329 4.820173 ACAAAGCTAGTACAAAGTTGGGTC 59.180 41.667 0.00 0.00 0.00 4.46
3113 5330 4.788679 ACAAAGCTAGTACAAAGTTGGGT 58.211 39.130 0.00 0.00 0.00 4.51
3114 5331 5.995897 AGTACAAAGCTAGTACAAAGTTGGG 59.004 40.000 23.49 0.00 43.24 4.12
3115 5332 8.597662 TTAGTACAAAGCTAGTACAAAGTTGG 57.402 34.615 23.49 0.00 43.24 3.77
3117 5334 8.771766 GCTTTAGTACAAAGCTAGTACAAAGTT 58.228 33.333 27.29 16.07 46.64 2.66
3118 5335 8.307921 GCTTTAGTACAAAGCTAGTACAAAGT 57.692 34.615 27.29 16.28 46.64 2.66
3135 5352 7.452501 TCCCTCAACTTTGTACTAGCTTTAGTA 59.547 37.037 0.00 0.00 0.00 1.82
3136 5353 6.269307 TCCCTCAACTTTGTACTAGCTTTAGT 59.731 38.462 0.00 0.00 0.00 2.24
3137 5354 6.698380 TCCCTCAACTTTGTACTAGCTTTAG 58.302 40.000 0.00 0.00 0.00 1.85
3138 5355 6.269307 ACTCCCTCAACTTTGTACTAGCTTTA 59.731 38.462 0.00 0.00 0.00 1.85
3139 5356 5.071923 ACTCCCTCAACTTTGTACTAGCTTT 59.928 40.000 0.00 0.00 0.00 3.51
3140 5357 4.593634 ACTCCCTCAACTTTGTACTAGCTT 59.406 41.667 0.00 0.00 0.00 3.74
3141 5358 4.161102 ACTCCCTCAACTTTGTACTAGCT 58.839 43.478 0.00 0.00 0.00 3.32
3142 5359 4.538746 ACTCCCTCAACTTTGTACTAGC 57.461 45.455 0.00 0.00 0.00 3.42
3143 5360 5.419471 AGCTACTCCCTCAACTTTGTACTAG 59.581 44.000 0.00 0.00 0.00 2.57
3144 5361 5.185249 CAGCTACTCCCTCAACTTTGTACTA 59.815 44.000 0.00 0.00 0.00 1.82
3145 5362 4.021016 CAGCTACTCCCTCAACTTTGTACT 60.021 45.833 0.00 0.00 0.00 2.73
3146 5363 4.246458 CAGCTACTCCCTCAACTTTGTAC 58.754 47.826 0.00 0.00 0.00 2.90
3147 5364 3.901844 ACAGCTACTCCCTCAACTTTGTA 59.098 43.478 0.00 0.00 0.00 2.41
3148 5365 2.706190 ACAGCTACTCCCTCAACTTTGT 59.294 45.455 0.00 0.00 0.00 2.83
3149 5366 3.070018 CACAGCTACTCCCTCAACTTTG 58.930 50.000 0.00 0.00 0.00 2.77
3150 5367 2.706190 ACACAGCTACTCCCTCAACTTT 59.294 45.455 0.00 0.00 0.00 2.66
3151 5368 2.037772 CACACAGCTACTCCCTCAACTT 59.962 50.000 0.00 0.00 0.00 2.66
3152 5369 1.620819 CACACAGCTACTCCCTCAACT 59.379 52.381 0.00 0.00 0.00 3.16
3153 5370 1.941668 GCACACAGCTACTCCCTCAAC 60.942 57.143 0.00 0.00 41.15 3.18
3154 5371 0.321671 GCACACAGCTACTCCCTCAA 59.678 55.000 0.00 0.00 41.15 3.02
3155 5372 1.975327 GCACACAGCTACTCCCTCA 59.025 57.895 0.00 0.00 41.15 3.86
3156 5373 4.921834 GCACACAGCTACTCCCTC 57.078 61.111 0.00 0.00 41.15 4.30
3191 5412 2.159421 CCAGAGCAAAGACATGATGTGC 60.159 50.000 1.23 4.63 29.49 4.57
3300 5536 6.310941 TCCCTCAAATGGTGTCTTAATTTCA 58.689 36.000 0.00 0.00 0.00 2.69
3333 5569 2.095110 CCAAGCAAACGCATGAATCTCA 60.095 45.455 0.00 0.00 29.56 3.27
3344 5580 2.549754 AGACTGATGAACCAAGCAAACG 59.450 45.455 0.00 0.00 0.00 3.60
3416 5681 2.364970 CAAGGCAAATGTTGTTCCTCCA 59.635 45.455 0.00 0.00 0.00 3.86
3418 5683 3.733443 ACAAGGCAAATGTTGTTCCTC 57.267 42.857 0.00 0.00 32.93 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.