Multiple sequence alignment - TraesCS1B01G009300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G009300 chr1B 100.000 4250 0 0 1 4250 4599014 4594765 0.000000e+00 7849.0
1 TraesCS1B01G009300 chr1B 87.546 2971 242 51 1255 4143 46830551 46827627 0.000000e+00 3319.0
2 TraesCS1B01G009300 chr1B 87.709 2335 216 38 1445 3753 4110198 4112487 0.000000e+00 2656.0
3 TraesCS1B01G009300 chr1B 90.050 2010 161 22 1445 3433 70232802 70234793 0.000000e+00 2567.0
4 TraesCS1B01G009300 chr1B 95.522 201 5 4 3947 4143 4797647 4797447 6.860000e-83 318.0
5 TraesCS1B01G009300 chr1B 93.689 206 9 4 3941 4143 4112608 4112812 5.340000e-79 305.0
6 TraesCS1B01G009300 chr1B 90.244 164 12 3 1255 1414 46691319 46691482 1.200000e-50 211.0
7 TraesCS1B01G009300 chr1B 90.132 152 8 3 1270 1414 4519749 4519598 1.560000e-44 191.0
8 TraesCS1B01G009300 chr1B 84.158 202 16 7 1021 1221 4144135 4144321 9.390000e-42 182.0
9 TraesCS1B01G009300 chr1B 88.816 152 9 4 1265 1408 4109416 4109567 3.380000e-41 180.0
10 TraesCS1B01G009300 chr1B 87.273 165 8 5 1255 1414 4543345 4543189 4.370000e-40 176.0
11 TraesCS1B01G009300 chr1B 84.211 190 17 7 1057 1244 4954511 4954333 5.650000e-39 172.0
12 TraesCS1B01G009300 chr1B 92.500 120 5 2 1295 1414 4955060 4954945 7.310000e-38 169.0
13 TraesCS1B01G009300 chr1B 83.168 202 14 10 1047 1244 4542034 4541849 2.630000e-37 167.0
14 TraesCS1B01G009300 chr1B 81.690 213 22 7 537 747 46830826 46830629 1.220000e-35 161.0
15 TraesCS1B01G009300 chr1B 84.524 168 19 5 1035 1199 4109587 4109750 4.400000e-35 159.0
16 TraesCS1B01G009300 chr1B 86.842 152 9 6 1270 1414 538505174 538505321 4.400000e-35 159.0
17 TraesCS1B01G009300 chr1B 81.218 197 24 9 3804 4000 4516594 4516411 3.420000e-31 147.0
18 TraesCS1B01G009300 chr1B 92.308 91 6 1 4053 4143 4951755 4951666 1.240000e-25 128.0
19 TraesCS1B01G009300 chr1B 83.916 143 12 4 823 954 4519775 4519633 4.460000e-25 126.0
20 TraesCS1B01G009300 chr1B 92.593 81 5 1 4038 4117 46694578 46694658 9.660000e-22 115.0
21 TraesCS1B01G009300 chr1B 93.478 46 3 0 4088 4133 4912603 4912558 7.630000e-08 69.4
22 TraesCS1B01G009300 chr1B 100.000 33 0 0 327 359 4603245 4603277 1.280000e-05 62.1
23 TraesCS1B01G009300 chr1B 92.500 40 3 0 3961 4000 3938665 3938704 1.650000e-04 58.4
24 TraesCS1B01G009300 chr1B 97.143 35 0 1 325 359 351173012 351172979 1.650000e-04 58.4
25 TraesCS1B01G009300 chr6A 88.681 2721 219 41 1445 4143 613493650 613496303 0.000000e+00 3236.0
26 TraesCS1B01G009300 chr6A 85.598 1472 135 38 2428 3866 64065216 64063789 0.000000e+00 1472.0
27 TraesCS1B01G009300 chr6A 84.127 189 18 5 1057 1244 613493588 613493765 5.650000e-39 172.0
28 TraesCS1B01G009300 chr6A 93.258 89 6 0 4160 4248 606041330 606041242 9.590000e-27 132.0
29 TraesCS1B01G009300 chr6A 90.000 100 3 4 1021 1115 613492992 613493089 5.770000e-24 122.0
30 TraesCS1B01G009300 chr6A 97.222 36 0 1 324 359 597929281 597929315 4.590000e-05 60.2
31 TraesCS1B01G009300 chr5B 89.162 2519 212 34 1445 3931 60825973 60823484 0.000000e+00 3083.0
32 TraesCS1B01G009300 chr5B 87.027 185 17 4 1071 1254 60826024 60825846 7.210000e-48 202.0
33 TraesCS1B01G009300 chr3D 88.638 2526 225 34 1446 3951 560024864 560022381 0.000000e+00 3018.0
34 TraesCS1B01G009300 chr3D 85.778 225 15 12 1035 1254 560025513 560025301 5.530000e-54 222.0
35 TraesCS1B01G009300 chr3D 90.066 151 5 6 1270 1414 560025661 560025515 2.020000e-43 187.0
36 TraesCS1B01G009300 chr3D 100.000 38 0 0 212 249 3528591 3528554 2.120000e-08 71.3
37 TraesCS1B01G009300 chr1A 90.009 2272 179 22 1475 3724 2943270 2945515 0.000000e+00 2894.0
38 TraesCS1B01G009300 chr1A 92.617 1964 122 13 1516 3466 3533051 3531098 0.000000e+00 2802.0
39 TraesCS1B01G009300 chr1A 86.681 2290 210 44 1445 3724 32545607 32547811 0.000000e+00 2451.0
40 TraesCS1B01G009300 chr1A 85.143 525 56 11 3470 3980 3015094 3015610 6.300000e-143 518.0
41 TraesCS1B01G009300 chr1A 77.869 610 70 31 380 967 2942067 2942633 6.860000e-83 318.0
42 TraesCS1B01G009300 chr1A 80.263 228 24 11 1029 1252 2949638 2949848 7.360000e-33 152.0
43 TraesCS1B01G009300 chr1A 94.203 69 4 0 4075 4143 32548113 32548181 5.810000e-19 106.0
44 TraesCS1B01G009300 chr6B 86.369 2465 222 55 1445 3866 120132882 120130489 0.000000e+00 2586.0
45 TraesCS1B01G009300 chr6D 86.010 2466 234 59 1445 3866 53144810 53142412 0.000000e+00 2540.0
46 TraesCS1B01G009300 chr6D 89.899 99 10 0 4146 4244 142846299 142846397 1.240000e-25 128.0
47 TraesCS1B01G009300 chr6D 74.505 404 49 28 846 1244 50956130 50956484 4.460000e-25 126.0
48 TraesCS1B01G009300 chr1D 85.382 903 83 13 3272 4143 387236 388120 0.000000e+00 891.0
49 TraesCS1B01G009300 chr1D 92.800 125 7 2 212 334 294207667 294207791 3.380000e-41 180.0
50 TraesCS1B01G009300 chr1D 94.253 87 4 1 4160 4245 154019327 154019413 9.590000e-27 132.0
51 TraesCS1B01G009300 chr1D 78.680 197 20 15 3804 4000 33988075 33988249 1.250000e-20 111.0
52 TraesCS1B01G009300 chr7B 97.006 334 9 1 1 333 699149864 699150197 1.030000e-155 560.0
53 TraesCS1B01G009300 chr2B 96.418 335 9 3 1 332 30998827 30998493 2.230000e-152 549.0
54 TraesCS1B01G009300 chr2B 88.158 152 7 6 1270 1414 741895713 741895860 2.030000e-38 171.0
55 TraesCS1B01G009300 chr2B 94.118 85 5 0 4160 4244 383072067 383072151 3.450000e-26 130.0
56 TraesCS1B01G009300 chr4A 94.964 139 6 1 1079 1216 578290564 578290702 2.570000e-52 217.0
57 TraesCS1B01G009300 chr4A 93.407 91 6 0 4160 4250 642603628 642603538 7.410000e-28 135.0
58 TraesCS1B01G009300 chr4A 93.333 90 5 1 4159 4248 743181471 743181559 9.590000e-27 132.0
59 TraesCS1B01G009300 chr4A 93.333 90 5 1 4159 4248 743224616 743224704 9.590000e-27 132.0
60 TraesCS1B01G009300 chr4A 91.398 93 8 0 4152 4244 176881308 176881400 1.240000e-25 128.0
61 TraesCS1B01G009300 chr2A 95.556 135 6 0 1082 1216 31069536 31069402 2.570000e-52 217.0
62 TraesCS1B01G009300 chr2A 90.526 95 5 4 243 335 16890476 16890384 5.770000e-24 122.0
63 TraesCS1B01G009300 chr7A 94.815 135 7 0 1082 1216 123593931 123594065 1.200000e-50 211.0
64 TraesCS1B01G009300 chr7A 92.045 88 6 1 212 298 412724475 412724388 5.770000e-24 122.0
65 TraesCS1B01G009300 chr3A 94.815 135 7 0 1082 1216 475549307 475549173 1.200000e-50 211.0
66 TraesCS1B01G009300 chr3A 92.000 150 7 2 1072 1216 226573640 226573491 5.570000e-49 206.0
67 TraesCS1B01G009300 chr3A 94.805 77 2 2 260 334 222447276 222447200 7.470000e-23 119.0
68 TraesCS1B01G009300 chr3A 78.824 170 21 4 178 333 148100511 148100679 2.700000e-17 100.0
69 TraesCS1B01G009300 chr3A 97.143 35 0 1 325 359 579524072 579524039 1.650000e-04 58.4
70 TraesCS1B01G009300 chr5D 85.870 184 20 5 1071 1254 57819500 57819677 1.560000e-44 191.0
71 TraesCS1B01G009300 chr5D 92.000 125 5 5 212 333 27453026 27453148 2.030000e-38 171.0
72 TraesCS1B01G009300 chr5D 92.982 57 4 0 3810 3866 497870078 497870134 2.720000e-12 84.2
73 TraesCS1B01G009300 chr5D 90.698 43 2 1 327 367 137016980 137017022 5.940000e-04 56.5
74 TraesCS1B01G009300 chr3B 86.932 176 9 3 178 339 735663938 735664113 7.260000e-43 185.0
75 TraesCS1B01G009300 chr3B 89.423 104 9 2 864 966 318289952 318290054 3.450000e-26 130.0
76 TraesCS1B01G009300 chr3B 92.222 90 6 1 212 300 702972490 702972401 4.460000e-25 126.0
77 TraesCS1B01G009300 chr3B 87.879 99 12 0 868 966 762526275 762526177 2.680000e-22 117.0
78 TraesCS1B01G009300 chr3B 97.619 42 1 0 328 369 739226984 739227025 5.890000e-09 73.1
79 TraesCS1B01G009300 chr3B 97.143 35 0 1 325 359 491531975 491531942 1.650000e-04 58.4
80 TraesCS1B01G009300 chr4D 90.476 126 10 2 212 335 8683669 8683544 9.450000e-37 165.0
81 TraesCS1B01G009300 chr4D 93.182 88 6 0 4160 4247 492602152 492602239 3.450000e-26 130.0
82 TraesCS1B01G009300 chrUn 87.121 132 10 2 1029 1160 325465979 325466103 4.430000e-30 143.0
83 TraesCS1B01G009300 chrUn 100.000 31 0 0 329 359 103505892 103505922 1.650000e-04 58.4
84 TraesCS1B01G009300 chr2D 100.000 33 0 0 327 359 528097339 528097371 1.280000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G009300 chr1B 4594765 4599014 4249 True 7849.000000 7849 100.000000 1 4250 1 chr1B.!!$R1 4249
1 TraesCS1B01G009300 chr1B 70232802 70234793 1991 False 2567.000000 2567 90.050000 1445 3433 1 chr1B.!!$F4 1988
2 TraesCS1B01G009300 chr1B 46827627 46830826 3199 True 1740.000000 3319 84.618000 537 4143 2 chr1B.!!$R8 3606
3 TraesCS1B01G009300 chr1B 4109416 4112812 3396 False 825.000000 2656 88.684500 1035 4143 4 chr1B.!!$F6 3108
4 TraesCS1B01G009300 chr6A 64063789 64065216 1427 True 1472.000000 1472 85.598000 2428 3866 1 chr6A.!!$R1 1438
5 TraesCS1B01G009300 chr6A 613492992 613496303 3311 False 1176.666667 3236 87.602667 1021 4143 3 chr6A.!!$F2 3122
6 TraesCS1B01G009300 chr5B 60823484 60826024 2540 True 1642.500000 3083 88.094500 1071 3931 2 chr5B.!!$R1 2860
7 TraesCS1B01G009300 chr3D 560022381 560025661 3280 True 1142.333333 3018 88.160667 1035 3951 3 chr3D.!!$R2 2916
8 TraesCS1B01G009300 chr1A 3531098 3533051 1953 True 2802.000000 2802 92.617000 1516 3466 1 chr1A.!!$R1 1950
9 TraesCS1B01G009300 chr1A 2942067 2945515 3448 False 1606.000000 2894 83.939000 380 3724 2 chr1A.!!$F3 3344
10 TraesCS1B01G009300 chr1A 32545607 32548181 2574 False 1278.500000 2451 90.442000 1445 4143 2 chr1A.!!$F4 2698
11 TraesCS1B01G009300 chr1A 3015094 3015610 516 False 518.000000 518 85.143000 3470 3980 1 chr1A.!!$F2 510
12 TraesCS1B01G009300 chr6B 120130489 120132882 2393 True 2586.000000 2586 86.369000 1445 3866 1 chr6B.!!$R1 2421
13 TraesCS1B01G009300 chr6D 53142412 53144810 2398 True 2540.000000 2540 86.010000 1445 3866 1 chr6D.!!$R1 2421
14 TraesCS1B01G009300 chr1D 387236 388120 884 False 891.000000 891 85.382000 3272 4143 1 chr1D.!!$F1 871

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.034380 TGTACTCGGGAGTCAGGGAG 60.034 60.0 4.3 0.0 42.54 4.30 F
476 478 0.036765 ACAGAGACGAGCGAGAGACT 60.037 55.0 0.0 0.0 0.00 3.24 F
1338 1577 0.109723 TGCCCAACCAAGACCTACAC 59.890 55.0 0.0 0.0 0.00 2.90 F
1861 3445 0.105224 TTTCCCTCGTGTCGAAGCAA 59.895 50.0 0.0 0.0 34.74 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1136 1190 0.035056 AATGACACTACAGGCAGGCC 60.035 55.000 0.97 0.97 0.0 5.19 R
1407 1692 0.332632 AGGCTGAATAAGGGCAAGCA 59.667 50.000 0.00 0.00 0.0 3.91 R
2140 3726 0.972883 GGAGTTCAGCCTGAGACACT 59.027 55.000 0.00 0.00 0.0 3.55 R
3282 4887 1.135603 CCTTGTCCAATGATGCACACG 60.136 52.381 0.00 0.00 0.0 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.046217 GGGTTCGGGGAGAGCAAC 60.046 66.667 0.00 0.00 0.00 4.17
18 19 2.434359 GGTTCGGGGAGAGCAACG 60.434 66.667 0.00 0.00 0.00 4.10
19 20 2.342648 GTTCGGGGAGAGCAACGT 59.657 61.111 0.00 0.00 0.00 3.99
20 21 1.588082 GTTCGGGGAGAGCAACGTA 59.412 57.895 0.00 0.00 0.00 3.57
21 22 0.037975 GTTCGGGGAGAGCAACGTAA 60.038 55.000 0.00 0.00 0.00 3.18
24 25 0.108329 CGGGGAGAGCAACGTAATGT 60.108 55.000 0.00 0.00 0.00 2.71
25 26 1.135527 CGGGGAGAGCAACGTAATGTA 59.864 52.381 0.00 0.00 0.00 2.29
26 27 2.547826 GGGGAGAGCAACGTAATGTAC 58.452 52.381 0.00 0.00 0.00 2.90
27 28 2.167900 GGGGAGAGCAACGTAATGTACT 59.832 50.000 0.00 0.00 0.00 2.73
28 29 3.445857 GGGAGAGCAACGTAATGTACTC 58.554 50.000 0.00 0.00 35.26 2.59
29 30 3.106672 GGAGAGCAACGTAATGTACTCG 58.893 50.000 0.00 0.00 38.37 4.18
30 31 3.106672 GAGAGCAACGTAATGTACTCGG 58.893 50.000 0.00 0.00 38.37 4.63
33 34 2.159282 AGCAACGTAATGTACTCGGGAG 60.159 50.000 0.00 0.00 0.00 4.30
35 36 3.432782 CAACGTAATGTACTCGGGAGTC 58.567 50.000 4.30 0.00 42.54 3.36
37 38 2.681848 ACGTAATGTACTCGGGAGTCAG 59.318 50.000 4.30 0.00 42.54 3.51
38 39 2.033049 CGTAATGTACTCGGGAGTCAGG 59.967 54.545 4.30 0.00 42.54 3.86
41 42 0.034380 TGTACTCGGGAGTCAGGGAG 60.034 60.000 4.30 0.00 42.54 4.30
42 43 0.255318 GTACTCGGGAGTCAGGGAGA 59.745 60.000 4.30 0.00 42.54 3.71
43 44 0.547075 TACTCGGGAGTCAGGGAGAG 59.453 60.000 4.30 5.14 42.54 3.20
46 47 0.914902 TCGGGAGTCAGGGAGAGAGA 60.915 60.000 0.00 0.00 0.00 3.10
47 48 0.750182 CGGGAGTCAGGGAGAGAGAC 60.750 65.000 0.00 0.00 0.00 3.36
48 49 0.750182 GGGAGTCAGGGAGAGAGACG 60.750 65.000 0.00 0.00 37.36 4.18
50 51 1.091537 GAGTCAGGGAGAGAGACGTG 58.908 60.000 0.00 0.00 37.36 4.49
51 52 0.693622 AGTCAGGGAGAGAGACGTGA 59.306 55.000 0.00 0.00 37.36 4.35
55 56 1.675483 CAGGGAGAGAGACGTGATCTG 59.325 57.143 4.66 0.00 38.00 2.90
56 57 1.028905 GGGAGAGAGACGTGATCTGG 58.971 60.000 4.66 0.00 38.00 3.86
57 58 1.028905 GGAGAGAGACGTGATCTGGG 58.971 60.000 4.66 0.00 38.00 4.45
58 59 1.028905 GAGAGAGACGTGATCTGGGG 58.971 60.000 4.66 0.00 38.00 4.96
59 60 1.040339 AGAGAGACGTGATCTGGGGC 61.040 60.000 4.66 0.00 38.00 5.80
60 61 2.105128 GAGACGTGATCTGGGGCG 59.895 66.667 0.00 0.00 38.00 6.13
61 62 2.362503 AGACGTGATCTGGGGCGA 60.363 61.111 0.00 0.00 35.81 5.54
62 63 2.105128 GACGTGATCTGGGGCGAG 59.895 66.667 0.00 0.00 0.00 5.03
64 65 4.227134 CGTGATCTGGGGCGAGGG 62.227 72.222 0.00 0.00 0.00 4.30
65 66 3.866582 GTGATCTGGGGCGAGGGG 61.867 72.222 0.00 0.00 0.00 4.79
66 67 4.414956 TGATCTGGGGCGAGGGGT 62.415 66.667 0.00 0.00 0.00 4.95
67 68 3.866582 GATCTGGGGCGAGGGGTG 61.867 72.222 0.00 0.00 0.00 4.61
76 77 3.077556 CGAGGGGTGGGGAGAGTG 61.078 72.222 0.00 0.00 0.00 3.51
77 78 2.689034 GAGGGGTGGGGAGAGTGG 60.689 72.222 0.00 0.00 0.00 4.00
78 79 4.354943 AGGGGTGGGGAGAGTGGG 62.355 72.222 0.00 0.00 0.00 4.61
79 80 4.348495 GGGGTGGGGAGAGTGGGA 62.348 72.222 0.00 0.00 0.00 4.37
80 81 3.009714 GGGTGGGGAGAGTGGGAC 61.010 72.222 0.00 0.00 0.00 4.46
81 82 3.391382 GGTGGGGAGAGTGGGACG 61.391 72.222 0.00 0.00 0.00 4.79
82 83 2.603776 GTGGGGAGAGTGGGACGT 60.604 66.667 0.00 0.00 0.00 4.34
83 84 2.603473 TGGGGAGAGTGGGACGTG 60.603 66.667 0.00 0.00 0.00 4.49
84 85 3.391382 GGGGAGAGTGGGACGTGG 61.391 72.222 0.00 0.00 0.00 4.94
85 86 2.283676 GGGAGAGTGGGACGTGGA 60.284 66.667 0.00 0.00 0.00 4.02
101 102 0.179059 TGGAACGTGTGTGCATCTGT 60.179 50.000 0.00 0.00 0.00 3.41
102 103 0.235665 GGAACGTGTGTGCATCTGTG 59.764 55.000 0.00 0.00 0.00 3.66
103 104 0.235665 GAACGTGTGTGCATCTGTGG 59.764 55.000 0.00 0.00 0.00 4.17
104 105 1.785041 AACGTGTGTGCATCTGTGGC 61.785 55.000 0.00 0.00 0.00 5.01
105 106 2.557805 GTGTGTGCATCTGTGGCG 59.442 61.111 0.00 0.00 0.00 5.69
106 107 1.960763 GTGTGTGCATCTGTGGCGA 60.961 57.895 0.00 0.00 0.00 5.54
107 108 1.003476 TGTGTGCATCTGTGGCGAT 60.003 52.632 0.00 0.00 0.00 4.58
108 109 1.300266 TGTGTGCATCTGTGGCGATG 61.300 55.000 0.00 0.00 42.83 3.84
109 110 1.003476 TGTGCATCTGTGGCGATGT 60.003 52.632 0.00 0.00 42.14 3.06
110 111 0.606130 TGTGCATCTGTGGCGATGTT 60.606 50.000 0.00 0.00 42.14 2.71
112 113 1.068333 GTGCATCTGTGGCGATGTTTT 60.068 47.619 0.00 0.00 42.14 2.43
129 130 2.624169 TTTTTCTGTTCCGAGCGGG 58.376 52.632 9.29 0.00 35.59 6.13
130 131 0.887387 TTTTTCTGTTCCGAGCGGGG 60.887 55.000 9.29 0.00 36.01 5.73
131 132 1.760479 TTTTCTGTTCCGAGCGGGGA 61.760 55.000 9.29 0.00 36.01 4.81
171 172 0.677288 TTTTCTGTTCCGAGCGAGGA 59.323 50.000 0.00 0.00 38.79 3.71
173 174 2.196382 TTCTGTTCCGAGCGAGGACG 62.196 60.000 2.60 0.00 40.56 4.79
180 181 3.213402 GAGCGAGGACGGGAGGAG 61.213 72.222 0.00 0.00 40.15 3.69
181 182 4.824515 AGCGAGGACGGGAGGAGG 62.825 72.222 0.00 0.00 40.15 4.30
183 184 2.829458 CGAGGACGGGAGGAGGTC 60.829 72.222 0.00 0.00 35.72 3.85
191 192 3.493303 GGAGGAGGTCCATGGGCC 61.493 72.222 29.08 29.08 46.10 5.80
192 193 3.866582 GAGGAGGTCCATGGGCCG 61.867 72.222 29.56 0.00 38.89 6.13
193 194 4.414956 AGGAGGTCCATGGGCCGA 62.415 66.667 29.56 0.00 38.89 5.54
194 195 3.407967 GGAGGTCCATGGGCCGAA 61.408 66.667 29.56 0.00 35.64 4.30
195 196 2.757124 GGAGGTCCATGGGCCGAAT 61.757 63.158 29.56 13.08 35.64 3.34
196 197 1.415672 GGAGGTCCATGGGCCGAATA 61.416 60.000 29.56 0.00 35.64 1.75
197 198 0.693049 GAGGTCCATGGGCCGAATAT 59.307 55.000 29.56 12.22 0.00 1.28
198 199 0.693049 AGGTCCATGGGCCGAATATC 59.307 55.000 29.56 3.88 0.00 1.63
199 200 0.673644 GGTCCATGGGCCGAATATCG 60.674 60.000 22.20 0.00 40.07 2.92
215 216 2.436646 CGGATGAGTTGCCGGCTT 60.437 61.111 29.70 13.53 43.67 4.35
216 217 2.753966 CGGATGAGTTGCCGGCTTG 61.754 63.158 29.70 2.55 43.67 4.01
217 218 2.486966 GATGAGTTGCCGGCTTGC 59.513 61.111 29.70 17.17 0.00 4.01
218 219 3.386867 GATGAGTTGCCGGCTTGCG 62.387 63.158 29.70 0.00 0.00 4.85
228 229 3.070576 GGCTTGCGGGCTGGATTT 61.071 61.111 0.00 0.00 37.53 2.17
229 230 2.649129 GGCTTGCGGGCTGGATTTT 61.649 57.895 0.00 0.00 37.53 1.82
230 231 1.446618 GCTTGCGGGCTGGATTTTG 60.447 57.895 0.00 0.00 0.00 2.44
231 232 1.966762 CTTGCGGGCTGGATTTTGT 59.033 52.632 0.00 0.00 0.00 2.83
232 233 0.388907 CTTGCGGGCTGGATTTTGTG 60.389 55.000 0.00 0.00 0.00 3.33
233 234 2.125952 GCGGGCTGGATTTTGTGC 60.126 61.111 0.00 0.00 0.00 4.57
234 235 2.179018 CGGGCTGGATTTTGTGCG 59.821 61.111 0.00 0.00 0.00 5.34
235 236 2.573340 GGGCTGGATTTTGTGCGG 59.427 61.111 0.00 0.00 0.00 5.69
236 237 2.573340 GGCTGGATTTTGTGCGGG 59.427 61.111 0.00 0.00 0.00 6.13
237 238 2.125952 GCTGGATTTTGTGCGGGC 60.126 61.111 0.00 0.00 0.00 6.13
238 239 2.179018 CTGGATTTTGTGCGGGCG 59.821 61.111 0.00 0.00 0.00 6.13
239 240 2.596046 TGGATTTTGTGCGGGCGT 60.596 55.556 0.00 0.00 0.00 5.68
240 241 2.126502 GGATTTTGTGCGGGCGTG 60.127 61.111 0.00 0.00 0.00 5.34
241 242 2.642700 GATTTTGTGCGGGCGTGT 59.357 55.556 0.00 0.00 0.00 4.49
242 243 1.729131 GATTTTGTGCGGGCGTGTG 60.729 57.895 0.00 0.00 0.00 3.82
243 244 3.206211 ATTTTGTGCGGGCGTGTGG 62.206 57.895 0.00 0.00 0.00 4.17
258 259 3.716195 TGGGACACTGCGGGATGG 61.716 66.667 0.00 0.00 0.00 3.51
260 261 4.101448 GGACACTGCGGGATGGCT 62.101 66.667 0.00 0.00 0.00 4.75
261 262 2.821366 GACACTGCGGGATGGCTG 60.821 66.667 0.00 0.00 37.80 4.85
262 263 3.612247 GACACTGCGGGATGGCTGT 62.612 63.158 0.00 0.00 44.51 4.40
263 264 2.821366 CACTGCGGGATGGCTGTC 60.821 66.667 0.00 0.00 42.23 3.51
264 265 4.457496 ACTGCGGGATGGCTGTCG 62.457 66.667 0.00 0.00 40.48 4.35
265 266 4.457496 CTGCGGGATGGCTGTCGT 62.457 66.667 0.00 0.00 0.00 4.34
266 267 3.071837 TGCGGGATGGCTGTCGTA 61.072 61.111 0.00 0.00 0.00 3.43
267 268 2.585247 GCGGGATGGCTGTCGTAC 60.585 66.667 0.00 0.00 0.00 3.67
268 269 2.278596 CGGGATGGCTGTCGTACG 60.279 66.667 9.53 9.53 0.00 3.67
269 270 2.767445 CGGGATGGCTGTCGTACGA 61.767 63.158 15.28 15.28 0.00 3.43
270 271 1.065928 GGGATGGCTGTCGTACGAG 59.934 63.158 20.18 9.32 0.00 4.18
271 272 1.065928 GGATGGCTGTCGTACGAGG 59.934 63.158 20.18 15.37 0.00 4.63
272 273 1.589196 GATGGCTGTCGTACGAGGC 60.589 63.158 25.56 25.56 35.37 4.70
273 274 3.411418 ATGGCTGTCGTACGAGGCG 62.411 63.158 26.06 16.52 37.58 5.52
274 275 4.849329 GGCTGTCGTACGAGGCGG 62.849 72.222 26.06 18.91 0.00 6.13
275 276 4.849329 GCTGTCGTACGAGGCGGG 62.849 72.222 20.18 8.20 0.00 6.13
276 277 4.189188 CTGTCGTACGAGGCGGGG 62.189 72.222 20.18 1.68 0.00 5.73
279 280 4.511246 TCGTACGAGGCGGGGGAT 62.511 66.667 15.28 0.00 0.00 3.85
280 281 4.280494 CGTACGAGGCGGGGGATG 62.280 72.222 10.44 0.00 0.00 3.51
281 282 3.925090 GTACGAGGCGGGGGATGG 61.925 72.222 0.00 0.00 0.00 3.51
282 283 4.146156 TACGAGGCGGGGGATGGA 62.146 66.667 0.00 0.00 0.00 3.41
283 284 3.682644 TACGAGGCGGGGGATGGAA 62.683 63.158 0.00 0.00 0.00 3.53
284 285 4.547367 CGAGGCGGGGGATGGAAC 62.547 72.222 0.00 0.00 0.00 3.62
285 286 4.547367 GAGGCGGGGGATGGAACG 62.547 72.222 0.00 0.00 0.00 3.95
287 288 4.547367 GGCGGGGGATGGAACGAG 62.547 72.222 0.00 0.00 0.00 4.18
288 289 4.547367 GCGGGGGATGGAACGAGG 62.547 72.222 0.00 0.00 0.00 4.63
289 290 3.081409 CGGGGGATGGAACGAGGT 61.081 66.667 0.00 0.00 0.00 3.85
290 291 2.590092 GGGGGATGGAACGAGGTG 59.410 66.667 0.00 0.00 0.00 4.00
291 292 2.590092 GGGGATGGAACGAGGTGG 59.410 66.667 0.00 0.00 0.00 4.61
292 293 2.298661 GGGGATGGAACGAGGTGGT 61.299 63.158 0.00 0.00 0.00 4.16
293 294 1.221021 GGGATGGAACGAGGTGGTC 59.779 63.158 0.00 0.00 0.00 4.02
308 309 4.546637 GTCGAACCATCACGACGT 57.453 55.556 0.00 0.00 46.39 4.34
309 310 2.805277 GTCGAACCATCACGACGTT 58.195 52.632 0.00 0.00 46.39 3.99
310 311 0.706729 GTCGAACCATCACGACGTTC 59.293 55.000 0.00 0.00 46.39 3.95
312 313 3.096541 GAACCATCACGACGTTCGA 57.903 52.632 13.06 0.00 43.74 3.71
313 314 1.625616 GAACCATCACGACGTTCGAT 58.374 50.000 13.06 0.00 43.74 3.59
314 315 1.582502 GAACCATCACGACGTTCGATC 59.417 52.381 13.06 0.00 43.74 3.69
315 316 0.179145 ACCATCACGACGTTCGATCC 60.179 55.000 13.06 0.00 43.74 3.36
316 317 0.870307 CCATCACGACGTTCGATCCC 60.870 60.000 13.06 0.00 43.74 3.85
317 318 0.870307 CATCACGACGTTCGATCCCC 60.870 60.000 13.06 0.00 43.74 4.81
318 319 1.035932 ATCACGACGTTCGATCCCCT 61.036 55.000 13.06 0.00 43.74 4.79
319 320 1.214589 CACGACGTTCGATCCCCTT 59.785 57.895 13.06 0.00 43.74 3.95
320 321 0.389426 CACGACGTTCGATCCCCTTT 60.389 55.000 13.06 0.00 43.74 3.11
321 322 1.135315 CACGACGTTCGATCCCCTTTA 60.135 52.381 13.06 0.00 43.74 1.85
322 323 1.133790 ACGACGTTCGATCCCCTTTAG 59.866 52.381 13.06 0.00 43.74 1.85
323 324 1.133790 CGACGTTCGATCCCCTTTAGT 59.866 52.381 0.00 0.00 43.74 2.24
324 325 2.355756 CGACGTTCGATCCCCTTTAGTA 59.644 50.000 0.00 0.00 43.74 1.82
325 326 3.547613 CGACGTTCGATCCCCTTTAGTAG 60.548 52.174 0.00 0.00 43.74 2.57
326 327 3.359950 ACGTTCGATCCCCTTTAGTAGT 58.640 45.455 0.00 0.00 0.00 2.73
327 328 4.526970 ACGTTCGATCCCCTTTAGTAGTA 58.473 43.478 0.00 0.00 0.00 1.82
328 329 4.578105 ACGTTCGATCCCCTTTAGTAGTAG 59.422 45.833 0.00 0.00 0.00 2.57
329 330 4.818546 CGTTCGATCCCCTTTAGTAGTAGA 59.181 45.833 0.00 0.00 0.00 2.59
330 331 5.049543 CGTTCGATCCCCTTTAGTAGTAGAG 60.050 48.000 0.00 0.00 0.00 2.43
331 332 5.901413 TCGATCCCCTTTAGTAGTAGAGA 57.099 43.478 0.00 0.00 0.00 3.10
332 333 6.451292 TCGATCCCCTTTAGTAGTAGAGAT 57.549 41.667 0.00 0.00 0.00 2.75
333 334 6.850234 TCGATCCCCTTTAGTAGTAGAGATT 58.150 40.000 0.00 0.00 0.00 2.40
334 335 7.296098 TCGATCCCCTTTAGTAGTAGAGATTT 58.704 38.462 0.00 0.00 0.00 2.17
335 336 7.230913 TCGATCCCCTTTAGTAGTAGAGATTTG 59.769 40.741 0.00 0.00 0.00 2.32
336 337 7.230913 CGATCCCCTTTAGTAGTAGAGATTTGA 59.769 40.741 0.00 0.00 0.00 2.69
337 338 7.899648 TCCCCTTTAGTAGTAGAGATTTGAG 57.100 40.000 0.00 0.00 0.00 3.02
338 339 6.839657 TCCCCTTTAGTAGTAGAGATTTGAGG 59.160 42.308 0.00 0.00 0.00 3.86
339 340 6.042208 CCCCTTTAGTAGTAGAGATTTGAGGG 59.958 46.154 0.00 0.00 38.89 4.30
340 341 6.042208 CCCTTTAGTAGTAGAGATTTGAGGGG 59.958 46.154 0.00 0.00 36.21 4.79
341 342 6.042208 CCTTTAGTAGTAGAGATTTGAGGGGG 59.958 46.154 0.00 0.00 0.00 5.40
342 343 4.901785 AGTAGTAGAGATTTGAGGGGGA 57.098 45.455 0.00 0.00 0.00 4.81
343 344 5.222278 AGTAGTAGAGATTTGAGGGGGAA 57.778 43.478 0.00 0.00 0.00 3.97
344 345 5.600749 AGTAGTAGAGATTTGAGGGGGAAA 58.399 41.667 0.00 0.00 0.00 3.13
345 346 6.030082 AGTAGTAGAGATTTGAGGGGGAAAA 58.970 40.000 0.00 0.00 0.00 2.29
346 347 5.180810 AGTAGAGATTTGAGGGGGAAAAC 57.819 43.478 0.00 0.00 0.00 2.43
347 348 4.852697 AGTAGAGATTTGAGGGGGAAAACT 59.147 41.667 0.00 0.00 0.00 2.66
348 349 6.030082 AGTAGAGATTTGAGGGGGAAAACTA 58.970 40.000 0.00 0.00 0.00 2.24
349 350 6.678857 AGTAGAGATTTGAGGGGGAAAACTAT 59.321 38.462 0.00 0.00 0.00 2.12
350 351 7.849904 AGTAGAGATTTGAGGGGGAAAACTATA 59.150 37.037 0.00 0.00 0.00 1.31
351 352 6.901300 AGAGATTTGAGGGGGAAAACTATAC 58.099 40.000 0.00 0.00 0.00 1.47
352 353 6.678857 AGAGATTTGAGGGGGAAAACTATACT 59.321 38.462 0.00 0.00 0.00 2.12
353 354 7.184753 AGAGATTTGAGGGGGAAAACTATACTT 59.815 37.037 0.00 0.00 0.00 2.24
354 355 7.709601 AGATTTGAGGGGGAAAACTATACTTT 58.290 34.615 0.00 0.00 0.00 2.66
355 356 7.834681 AGATTTGAGGGGGAAAACTATACTTTC 59.165 37.037 0.00 0.00 32.96 2.62
356 357 6.713731 TTGAGGGGGAAAACTATACTTTCT 57.286 37.500 0.00 0.00 33.99 2.52
357 358 6.713731 TGAGGGGGAAAACTATACTTTCTT 57.286 37.500 0.00 0.00 33.99 2.52
358 359 6.718294 TGAGGGGGAAAACTATACTTTCTTC 58.282 40.000 0.00 0.00 33.99 2.87
359 360 6.273730 TGAGGGGGAAAACTATACTTTCTTCA 59.726 38.462 0.00 0.00 33.99 3.02
360 361 7.098845 AGGGGGAAAACTATACTTTCTTCAA 57.901 36.000 0.00 0.00 33.99 2.69
361 362 7.175797 AGGGGGAAAACTATACTTTCTTCAAG 58.824 38.462 0.00 0.00 38.64 3.02
362 363 7.018249 AGGGGGAAAACTATACTTTCTTCAAGA 59.982 37.037 0.00 0.00 36.21 3.02
363 364 7.668469 GGGGGAAAACTATACTTTCTTCAAGAA 59.332 37.037 0.00 0.00 36.21 2.52
364 365 9.074576 GGGGAAAACTATACTTTCTTCAAGAAA 57.925 33.333 12.12 12.12 41.51 2.52
446 448 4.790962 CCGCTGCAGCCCACATCT 62.791 66.667 32.07 0.00 37.91 2.90
447 449 2.187685 CGCTGCAGCCCACATCTA 59.812 61.111 32.07 0.00 37.91 1.98
448 450 1.450134 CGCTGCAGCCCACATCTAA 60.450 57.895 32.07 0.00 37.91 2.10
449 451 1.026182 CGCTGCAGCCCACATCTAAA 61.026 55.000 32.07 0.00 37.91 1.85
450 452 1.396653 GCTGCAGCCCACATCTAAAT 58.603 50.000 28.76 0.00 34.31 1.40
451 453 1.066605 GCTGCAGCCCACATCTAAATG 59.933 52.381 28.76 0.00 35.46 2.32
452 454 2.646930 CTGCAGCCCACATCTAAATGA 58.353 47.619 0.00 0.00 36.67 2.57
453 455 3.018856 CTGCAGCCCACATCTAAATGAA 58.981 45.455 0.00 0.00 36.67 2.57
454 456 3.429492 TGCAGCCCACATCTAAATGAAA 58.571 40.909 0.00 0.00 36.67 2.69
455 457 4.025360 TGCAGCCCACATCTAAATGAAAT 58.975 39.130 0.00 0.00 36.67 2.17
456 458 4.467082 TGCAGCCCACATCTAAATGAAATT 59.533 37.500 0.00 0.00 38.98 1.82
473 475 3.684103 AATTACAGAGACGAGCGAGAG 57.316 47.619 0.00 0.00 0.00 3.20
474 476 2.381725 TTACAGAGACGAGCGAGAGA 57.618 50.000 0.00 0.00 0.00 3.10
475 477 1.642728 TACAGAGACGAGCGAGAGAC 58.357 55.000 0.00 0.00 0.00 3.36
476 478 0.036765 ACAGAGACGAGCGAGAGACT 60.037 55.000 0.00 0.00 0.00 3.24
477 479 1.205179 ACAGAGACGAGCGAGAGACTA 59.795 52.381 0.00 0.00 0.00 2.59
478 480 1.858458 CAGAGACGAGCGAGAGACTAG 59.142 57.143 0.00 0.00 0.00 2.57
499 501 3.702045 AGCTAGCTAGGGTTTACACTCTG 59.298 47.826 17.69 0.00 33.23 3.35
504 506 3.677424 GCTAGGGTTTACACTCTGCTCTG 60.677 52.174 0.00 0.00 33.23 3.35
525 527 0.622154 TCTCCTCTCCTCTCCTCCGT 60.622 60.000 0.00 0.00 0.00 4.69
526 528 0.179029 CTCCTCTCCTCTCCTCCGTC 60.179 65.000 0.00 0.00 0.00 4.79
527 529 1.525077 CCTCTCCTCTCCTCCGTCG 60.525 68.421 0.00 0.00 0.00 5.12
531 539 3.578272 CCTCTCCTCCGTCGAGCG 61.578 72.222 0.00 0.00 40.95 5.03
566 579 0.690762 GGTCAAGCCTCAAGGTACCA 59.309 55.000 15.94 0.00 37.57 3.25
577 590 2.158986 TCAAGGTACCACCGTTTTTCGA 60.159 45.455 15.94 0.00 44.90 3.71
587 600 3.746492 CACCGTTTTTCGATTCTCCTCTT 59.254 43.478 0.00 0.00 42.86 2.85
619 635 2.444895 CCCCTCCCTCCCTCTTCG 60.445 72.222 0.00 0.00 0.00 3.79
622 638 0.910088 CCCTCCCTCCCTCTTCGTTT 60.910 60.000 0.00 0.00 0.00 3.60
629 645 0.882927 TCCCTCTTCGTTTGTTGCGG 60.883 55.000 0.00 0.00 0.00 5.69
654 670 2.689658 TCCCCGATTCCACATGTAGAT 58.310 47.619 0.00 0.00 0.00 1.98
656 672 2.146342 CCCGATTCCACATGTAGATGC 58.854 52.381 0.00 0.00 32.14 3.91
657 673 1.794701 CCGATTCCACATGTAGATGCG 59.205 52.381 0.00 3.74 32.14 4.73
720 738 3.273434 GGAAACCAAACCCGGTAGTATC 58.727 50.000 0.00 0.00 38.76 2.24
724 742 2.436911 ACCAAACCCGGTAGTATCATCC 59.563 50.000 0.00 0.00 37.57 3.51
725 743 2.224450 CCAAACCCGGTAGTATCATCCC 60.224 54.545 0.00 0.00 0.00 3.85
732 750 3.107601 CGGTAGTATCATCCCCATCCAT 58.892 50.000 0.00 0.00 0.00 3.41
743 761 7.699709 TCATCCCCATCCATAAACTTAGTTA 57.300 36.000 0.00 0.00 0.00 2.24
749 767 9.862149 CCCCATCCATAAACTTAGTTATTAGTT 57.138 33.333 0.00 0.00 36.20 2.24
764 782 8.205131 AGTTATTAGTTAATGCTGTAAACCCG 57.795 34.615 0.00 0.00 0.00 5.28
765 783 7.281549 AGTTATTAGTTAATGCTGTAAACCCGG 59.718 37.037 0.00 0.00 0.00 5.73
766 784 3.428413 AGTTAATGCTGTAAACCCGGT 57.572 42.857 0.00 0.00 0.00 5.28
767 785 4.556592 AGTTAATGCTGTAAACCCGGTA 57.443 40.909 0.00 0.00 0.00 4.02
768 786 4.510571 AGTTAATGCTGTAAACCCGGTAG 58.489 43.478 0.00 0.00 0.00 3.18
769 787 4.019950 AGTTAATGCTGTAAACCCGGTAGT 60.020 41.667 0.00 0.00 0.00 2.73
770 788 5.187576 AGTTAATGCTGTAAACCCGGTAGTA 59.812 40.000 0.00 0.00 0.00 1.82
771 789 4.765813 AATGCTGTAAACCCGGTAGTAT 57.234 40.909 0.00 0.00 0.00 2.12
772 790 3.806625 TGCTGTAAACCCGGTAGTATC 57.193 47.619 0.00 0.00 0.00 2.24
773 791 3.368248 TGCTGTAAACCCGGTAGTATCT 58.632 45.455 0.00 0.00 0.00 1.98
774 792 3.770933 TGCTGTAAACCCGGTAGTATCTT 59.229 43.478 0.00 0.00 0.00 2.40
775 793 4.117685 GCTGTAAACCCGGTAGTATCTTG 58.882 47.826 0.00 0.00 0.00 3.02
776 794 4.382362 GCTGTAAACCCGGTAGTATCTTGT 60.382 45.833 0.00 0.00 0.00 3.16
777 795 5.727434 CTGTAAACCCGGTAGTATCTTGTT 58.273 41.667 0.00 0.00 0.00 2.83
778 796 5.723295 TGTAAACCCGGTAGTATCTTGTTC 58.277 41.667 0.00 0.00 0.00 3.18
779 797 5.481473 TGTAAACCCGGTAGTATCTTGTTCT 59.519 40.000 0.00 0.00 0.00 3.01
780 798 5.494390 AAACCCGGTAGTATCTTGTTCTT 57.506 39.130 0.00 0.00 0.00 2.52
781 799 4.467198 ACCCGGTAGTATCTTGTTCTTG 57.533 45.455 0.00 0.00 0.00 3.02
782 800 4.091549 ACCCGGTAGTATCTTGTTCTTGA 58.908 43.478 0.00 0.00 0.00 3.02
786 804 6.264744 CCCGGTAGTATCTTGTTCTTGATAGA 59.735 42.308 0.00 0.00 0.00 1.98
787 805 7.364200 CCGGTAGTATCTTGTTCTTGATAGAG 58.636 42.308 0.00 0.00 0.00 2.43
807 825 8.719560 ATAGAGGTAGTAAGTAAGCTTTTTGC 57.280 34.615 3.20 3.82 43.29 3.68
810 828 5.705905 AGGTAGTAAGTAAGCTTTTTGCCTG 59.294 40.000 3.20 0.00 44.23 4.85
811 829 5.472478 GGTAGTAAGTAAGCTTTTTGCCTGT 59.528 40.000 3.20 0.00 44.23 4.00
812 830 6.652062 GGTAGTAAGTAAGCTTTTTGCCTGTA 59.348 38.462 3.20 0.00 44.23 2.74
813 831 7.336176 GGTAGTAAGTAAGCTTTTTGCCTGTAT 59.664 37.037 3.20 0.00 44.23 2.29
814 832 7.379098 AGTAAGTAAGCTTTTTGCCTGTATC 57.621 36.000 3.20 0.00 44.23 2.24
819 860 6.717084 AGTAAGCTTTTTGCCTGTATCTTCTT 59.283 34.615 3.20 0.00 44.23 2.52
820 861 5.635417 AGCTTTTTGCCTGTATCTTCTTC 57.365 39.130 0.00 0.00 44.23 2.87
825 866 7.581213 TTTTTGCCTGTATCTTCTTCTTGAA 57.419 32.000 0.00 0.00 0.00 2.69
833 874 9.829507 CCTGTATCTTCTTCTTGAACAGATATT 57.170 33.333 0.00 0.00 30.94 1.28
844 885 8.964476 TCTTGAACAGATATTAGATTGAACCC 57.036 34.615 0.00 0.00 0.00 4.11
854 898 2.991250 AGATTGAACCCAACTCATCGG 58.009 47.619 0.00 0.00 34.72 4.18
856 900 0.400213 TTGAACCCAACTCATCGGCT 59.600 50.000 0.00 0.00 0.00 5.52
876 920 1.002201 TGTGGCAGGCAAAATGATTGG 59.998 47.619 0.00 0.00 0.00 3.16
882 926 3.337358 CAGGCAAAATGATTGGTTTCCC 58.663 45.455 0.00 0.00 0.00 3.97
884 928 3.008266 AGGCAAAATGATTGGTTTCCCTG 59.992 43.478 0.00 0.00 0.00 4.45
897 942 3.384668 GTTTCCCTGCTTTCTTTCTTGC 58.615 45.455 0.00 0.00 0.00 4.01
898 943 1.620822 TCCCTGCTTTCTTTCTTGCC 58.379 50.000 0.00 0.00 0.00 4.52
902 947 2.288640 CCTGCTTTCTTTCTTGCCCAAG 60.289 50.000 1.62 1.62 39.71 3.61
957 1005 7.741027 ATATGCTCTGGATTTCATGTTACTG 57.259 36.000 0.00 0.00 0.00 2.74
958 1006 4.910195 TGCTCTGGATTTCATGTTACTGT 58.090 39.130 0.00 0.00 0.00 3.55
960 1008 6.472016 TGCTCTGGATTTCATGTTACTGTTA 58.528 36.000 0.00 0.00 0.00 2.41
962 1010 7.611467 TGCTCTGGATTTCATGTTACTGTTAAT 59.389 33.333 0.00 0.00 0.00 1.40
963 1011 8.462016 GCTCTGGATTTCATGTTACTGTTAATT 58.538 33.333 0.00 0.00 0.00 1.40
966 1014 9.722056 CTGGATTTCATGTTACTGTTAATTAGC 57.278 33.333 0.00 0.00 0.00 3.09
967 1015 9.237187 TGGATTTCATGTTACTGTTAATTAGCA 57.763 29.630 1.83 1.83 0.00 3.49
976 1024 9.405587 TGTTACTGTTAATTAGCATTTCTTTGC 57.594 29.630 2.21 0.00 43.09 3.68
981 1029 9.142515 CTGTTAATTAGCATTTCTTTGCATTCA 57.857 29.630 2.21 0.00 45.23 2.57
982 1030 9.142515 TGTTAATTAGCATTTCTTTGCATTCAG 57.857 29.630 0.00 0.00 45.23 3.02
983 1031 9.357652 GTTAATTAGCATTTCTTTGCATTCAGA 57.642 29.630 0.00 0.00 45.23 3.27
986 1034 8.644318 ATTAGCATTTCTTTGCATTCAGATTC 57.356 30.769 0.00 0.00 45.23 2.52
987 1035 6.032956 AGCATTTCTTTGCATTCAGATTCA 57.967 33.333 0.00 0.00 45.23 2.57
988 1036 6.100004 AGCATTTCTTTGCATTCAGATTCAG 58.900 36.000 0.00 0.00 45.23 3.02
989 1037 5.220416 GCATTTCTTTGCATTCAGATTCAGC 60.220 40.000 0.00 0.00 42.31 4.26
990 1038 5.456548 TTTCTTTGCATTCAGATTCAGCA 57.543 34.783 0.00 0.00 0.00 4.41
991 1039 4.430137 TCTTTGCATTCAGATTCAGCAC 57.570 40.909 0.00 0.00 34.56 4.40
992 1040 2.905959 TTGCATTCAGATTCAGCACG 57.094 45.000 0.00 0.00 34.56 5.34
993 1041 1.812235 TGCATTCAGATTCAGCACGT 58.188 45.000 0.00 0.00 0.00 4.49
994 1042 2.153645 TGCATTCAGATTCAGCACGTT 58.846 42.857 0.00 0.00 0.00 3.99
995 1043 2.553602 TGCATTCAGATTCAGCACGTTT 59.446 40.909 0.00 0.00 0.00 3.60
996 1044 3.166657 GCATTCAGATTCAGCACGTTTC 58.833 45.455 0.00 0.00 0.00 2.78
997 1045 3.120060 GCATTCAGATTCAGCACGTTTCT 60.120 43.478 0.00 0.00 0.00 2.52
998 1046 4.614535 GCATTCAGATTCAGCACGTTTCTT 60.615 41.667 0.00 0.00 0.00 2.52
999 1047 5.455392 CATTCAGATTCAGCACGTTTCTTT 58.545 37.500 0.00 0.00 0.00 2.52
1000 1048 4.472691 TCAGATTCAGCACGTTTCTTTG 57.527 40.909 0.00 0.00 0.00 2.77
1001 1049 2.975851 CAGATTCAGCACGTTTCTTTGC 59.024 45.455 0.00 0.00 39.16 3.68
1002 1050 2.618241 AGATTCAGCACGTTTCTTTGCA 59.382 40.909 0.00 0.00 41.48 4.08
1003 1051 3.254166 AGATTCAGCACGTTTCTTTGCAT 59.746 39.130 0.00 0.00 41.48 3.96
1004 1052 4.455533 AGATTCAGCACGTTTCTTTGCATA 59.544 37.500 0.00 0.00 41.48 3.14
1005 1053 4.764679 TTCAGCACGTTTCTTTGCATAT 57.235 36.364 0.00 0.00 41.48 1.78
1006 1054 5.871465 TTCAGCACGTTTCTTTGCATATA 57.129 34.783 0.00 0.00 41.48 0.86
1007 1055 6.435430 TTCAGCACGTTTCTTTGCATATAT 57.565 33.333 0.00 0.00 41.48 0.86
1008 1056 7.546778 TTCAGCACGTTTCTTTGCATATATA 57.453 32.000 0.00 0.00 41.48 0.86
1009 1057 6.943981 TCAGCACGTTTCTTTGCATATATAC 58.056 36.000 0.00 0.00 41.48 1.47
1010 1058 5.840781 CAGCACGTTTCTTTGCATATATACG 59.159 40.000 8.89 8.89 41.48 3.06
1011 1059 5.522460 AGCACGTTTCTTTGCATATATACGT 59.478 36.000 9.94 9.94 41.48 3.57
1012 1060 6.698329 AGCACGTTTCTTTGCATATATACGTA 59.302 34.615 13.83 0.00 41.48 3.57
1013 1061 6.784227 GCACGTTTCTTTGCATATATACGTAC 59.216 38.462 13.83 7.37 38.73 3.67
1014 1062 7.515528 GCACGTTTCTTTGCATATATACGTACA 60.516 37.037 13.83 0.00 38.73 2.90
1015 1063 8.484799 CACGTTTCTTTGCATATATACGTACAT 58.515 33.333 13.83 0.00 38.73 2.29
1016 1064 8.484799 ACGTTTCTTTGCATATATACGTACATG 58.515 33.333 12.96 3.39 38.96 3.21
1017 1065 8.484799 CGTTTCTTTGCATATATACGTACATGT 58.515 33.333 2.69 2.69 0.00 3.21
1021 1069 9.414295 TCTTTGCATATATACGTACATGTTACC 57.586 33.333 2.30 0.00 0.00 2.85
1022 1070 7.800015 TTGCATATATACGTACATGTTACCG 57.200 36.000 2.30 7.19 0.00 4.02
1067 1115 6.929606 AGCACGTTTCTTTGTATTCTCTTAGT 59.070 34.615 0.00 0.00 0.00 2.24
1068 1116 7.441458 AGCACGTTTCTTTGTATTCTCTTAGTT 59.559 33.333 0.00 0.00 0.00 2.24
1069 1117 8.706035 GCACGTTTCTTTGTATTCTCTTAGTTA 58.294 33.333 0.00 0.00 0.00 2.24
1115 1169 6.540914 TGCTTGCTACTTAATTATGGTGGTAC 59.459 38.462 3.66 0.00 0.00 3.34
1118 1172 7.917730 TGCTACTTAATTATGGTGGTACCTA 57.082 36.000 14.36 0.00 39.58 3.08
1119 1173 8.321621 TGCTACTTAATTATGGTGGTACCTAA 57.678 34.615 14.36 3.54 39.58 2.69
1120 1174 8.940982 TGCTACTTAATTATGGTGGTACCTAAT 58.059 33.333 14.36 5.90 39.58 1.73
1140 1194 9.212593 ACCTAATTTAATTTAATGATGTGGCCT 57.787 29.630 3.32 0.00 0.00 5.19
1141 1195 9.480053 CCTAATTTAATTTAATGATGTGGCCTG 57.520 33.333 3.32 0.00 0.00 4.85
1142 1196 7.790823 AATTTAATTTAATGATGTGGCCTGC 57.209 32.000 3.32 0.00 0.00 4.85
1143 1197 3.825143 AATTTAATGATGTGGCCTGCC 57.175 42.857 3.32 0.00 0.00 4.85
1144 1198 2.530460 TTTAATGATGTGGCCTGCCT 57.470 45.000 9.97 0.00 36.94 4.75
1145 1199 1.766494 TTAATGATGTGGCCTGCCTG 58.234 50.000 9.97 0.00 36.94 4.85
1146 1200 0.625316 TAATGATGTGGCCTGCCTGT 59.375 50.000 9.97 0.00 36.94 4.00
1147 1201 0.625316 AATGATGTGGCCTGCCTGTA 59.375 50.000 9.97 0.00 36.94 2.74
1148 1202 0.182061 ATGATGTGGCCTGCCTGTAG 59.818 55.000 9.97 0.00 36.94 2.74
1149 1203 1.200760 TGATGTGGCCTGCCTGTAGT 61.201 55.000 9.97 0.00 36.94 2.73
1150 1204 0.745845 GATGTGGCCTGCCTGTAGTG 60.746 60.000 9.97 0.00 36.94 2.74
1151 1205 1.492133 ATGTGGCCTGCCTGTAGTGT 61.492 55.000 9.97 0.00 36.94 3.55
1152 1206 1.376037 GTGGCCTGCCTGTAGTGTC 60.376 63.158 9.97 0.00 36.94 3.67
1153 1207 1.841103 TGGCCTGCCTGTAGTGTCA 60.841 57.895 9.97 0.00 36.94 3.58
1166 1220 7.500892 TGCCTGTAGTGTCATTTTTCTTTCTAA 59.499 33.333 0.00 0.00 0.00 2.10
1167 1221 8.515414 GCCTGTAGTGTCATTTTTCTTTCTAAT 58.485 33.333 0.00 0.00 0.00 1.73
1195 1249 4.525024 TCTAGAGACAGGTAAGGTGCTAC 58.475 47.826 0.00 0.00 0.00 3.58
1242 1296 8.840833 TCTCTATGCTTATAAAACAACACACA 57.159 30.769 0.00 0.00 0.00 3.72
1289 1524 4.783621 TCATCGGCTGTGGCTGGC 62.784 66.667 0.00 0.00 44.44 4.85
1337 1576 0.847373 TTGCCCAACCAAGACCTACA 59.153 50.000 0.00 0.00 0.00 2.74
1338 1577 0.109723 TGCCCAACCAAGACCTACAC 59.890 55.000 0.00 0.00 0.00 2.90
1339 1578 0.109723 GCCCAACCAAGACCTACACA 59.890 55.000 0.00 0.00 0.00 3.72
1396 1681 6.507958 TTTCATGTTCGGATTCAGCAATTA 57.492 33.333 0.00 0.00 0.00 1.40
1403 1688 7.324935 TGTTCGGATTCAGCAATTAGTAGTAA 58.675 34.615 0.00 0.00 0.00 2.24
1404 1689 7.985184 TGTTCGGATTCAGCAATTAGTAGTAAT 59.015 33.333 0.00 0.00 0.00 1.89
1406 1691 8.589335 TCGGATTCAGCAATTAGTAGTAATTC 57.411 34.615 11.84 7.99 36.83 2.17
1407 1692 8.421784 TCGGATTCAGCAATTAGTAGTAATTCT 58.578 33.333 11.84 9.71 36.83 2.40
1410 1695 8.970859 ATTCAGCAATTAGTAGTAATTCTGCT 57.029 30.769 17.99 17.99 40.83 4.24
1412 1697 8.201554 TCAGCAATTAGTAGTAATTCTGCTTG 57.798 34.615 19.96 16.31 39.28 4.01
1414 1699 6.038714 AGCAATTAGTAGTAATTCTGCTTGCC 59.961 38.462 17.99 5.27 38.64 4.52
1427 1840 1.563879 TGCTTGCCCTTATTCAGCCTA 59.436 47.619 0.00 0.00 0.00 3.93
1464 1895 3.444388 GGTTAATTTAACGATGTGGCCCA 59.556 43.478 12.02 0.00 39.54 5.36
1504 1947 6.627087 TTCTTCCTAACAATCCAGAGACAT 57.373 37.500 0.00 0.00 0.00 3.06
1507 1950 8.324191 TCTTCCTAACAATCCAGAGACATATT 57.676 34.615 0.00 0.00 0.00 1.28
1546 2520 8.286097 GCTACTTCAATAAATCTCCATGCTTAC 58.714 37.037 0.00 0.00 0.00 2.34
1558 2532 2.559872 CATGCTTACGAACAACACACG 58.440 47.619 0.00 0.00 0.00 4.49
1596 3142 3.911661 AAGTGCTCAAACTTCATCAGC 57.088 42.857 0.00 0.00 35.44 4.26
1635 3184 0.249489 GAGTGTCTGTCGCCAGTGTT 60.249 55.000 0.00 0.00 39.82 3.32
1666 3226 7.373778 TCTATCTTCACATGCATGCATTATC 57.626 36.000 30.32 0.00 33.90 1.75
1674 3238 6.661805 TCACATGCATGCATTATCCTGATATT 59.338 34.615 30.32 2.79 33.90 1.28
1675 3239 7.830201 TCACATGCATGCATTATCCTGATATTA 59.170 33.333 30.32 0.00 33.90 0.98
1676 3240 8.630037 CACATGCATGCATTATCCTGATATTAT 58.370 33.333 30.32 1.56 33.90 1.28
1677 3241 9.856162 ACATGCATGCATTATCCTGATATTATA 57.144 29.630 30.32 0.00 33.90 0.98
1820 3404 3.966665 AGAGATTCTCAAGAGGATCACCC 59.033 47.826 18.17 8.54 44.25 4.61
1855 3439 2.656560 ATTCTCTTTCCCTCGTGTCG 57.343 50.000 0.00 0.00 0.00 4.35
1861 3445 0.105224 TTTCCCTCGTGTCGAAGCAA 59.895 50.000 0.00 0.00 34.74 3.91
2165 3753 1.669115 CAGGCTGAACTCCACACCG 60.669 63.158 9.42 0.00 0.00 4.94
2176 3764 3.219281 ACTCCACACCGCAAATAACTTT 58.781 40.909 0.00 0.00 0.00 2.66
2185 3773 3.368323 CCGCAAATAACTTTGATTGGGCT 60.368 43.478 2.41 0.00 43.71 5.19
2481 4078 6.379133 ACAGCATGGATTTGTATGATTTCTGT 59.621 34.615 0.00 0.00 43.62 3.41
2576 4173 4.706962 AGGGAAATGTAAAGCATTGGAGAC 59.293 41.667 0.00 0.00 46.29 3.36
2641 4239 1.134431 TGCATTATCTCGGAGCTGCAA 60.134 47.619 16.46 0.00 36.75 4.08
2645 4243 2.988010 TATCTCGGAGCTGCAACAAT 57.012 45.000 5.91 0.00 0.00 2.71
2884 4485 0.865111 CCGATTCGTGTTCTTGTGCA 59.135 50.000 5.20 0.00 0.00 4.57
2972 4573 6.727824 ACACTTCAGCTTATATTGTGTCAC 57.272 37.500 0.00 0.00 32.66 3.67
3047 4648 4.200838 TCTCACACTTCAGTTGTGTCAA 57.799 40.909 2.62 0.00 45.56 3.18
3190 4791 5.658634 ACTACTCCAGCAACTATTCAGATGA 59.341 40.000 0.00 0.00 0.00 2.92
3209 4810 4.222124 TGACCTTAGGAAGAGAATTGGC 57.778 45.455 4.77 0.00 0.00 4.52
3282 4887 5.689383 TGCTGAAGACATTAAGTTGTTCC 57.311 39.130 0.00 0.00 0.00 3.62
3305 4935 2.950433 GTGCATCATTGGACAAGGTTG 58.050 47.619 0.00 4.04 43.17 3.77
3436 5089 8.918202 TCTGGTGAATGAAACTTTAATACTGT 57.082 30.769 0.00 0.00 0.00 3.55
3501 5170 8.372459 TGGTTGCTTAATTTCTACTCTCTGTAA 58.628 33.333 0.00 0.00 0.00 2.41
3549 5224 2.289631 CCCAAGATTCCCTGTTTTTGCC 60.290 50.000 0.00 0.00 0.00 4.52
3567 5244 2.732412 CCGTGGAGGCACTATATGAG 57.268 55.000 0.00 0.00 41.55 2.90
3698 5391 8.320295 GCAATTTTTGTATGGATCGTTGTATTG 58.680 33.333 0.00 0.00 0.00 1.90
3874 5643 5.123936 GGAACAACTGAAACTACTCAAGGT 58.876 41.667 0.00 0.00 0.00 3.50
3912 5687 6.891361 TGTGTGCTAATTACAGGTAGGTAGTA 59.109 38.462 0.00 0.00 0.00 1.82
3990 5767 3.199442 TGAGGGGGTCACATCTCTTTA 57.801 47.619 0.00 0.00 0.00 1.85
4080 5871 9.344772 TCCTTTTATTTTAGTAACAAGACAGCA 57.655 29.630 0.00 0.00 0.00 4.41
4143 5934 6.351711 TGTATTTGTAGCTCATCAAGATGCT 58.648 36.000 5.19 3.06 38.65 3.79
4144 5935 7.500141 TGTATTTGTAGCTCATCAAGATGCTA 58.500 34.615 5.19 2.15 38.65 3.49
4145 5936 6.857777 ATTTGTAGCTCATCAAGATGCTAC 57.142 37.500 18.38 18.38 44.83 3.58
4146 5937 3.969899 TGTAGCTCATCAAGATGCTACG 58.030 45.455 19.22 6.27 46.03 3.51
4147 5938 3.381590 TGTAGCTCATCAAGATGCTACGT 59.618 43.478 19.22 0.00 46.03 3.57
4148 5939 4.578928 TGTAGCTCATCAAGATGCTACGTA 59.421 41.667 19.22 0.00 46.03 3.57
4149 5940 4.655762 AGCTCATCAAGATGCTACGTAA 57.344 40.909 5.19 0.00 38.65 3.18
4150 5941 5.207110 AGCTCATCAAGATGCTACGTAAT 57.793 39.130 5.19 0.00 38.65 1.89
4151 5942 6.332735 AGCTCATCAAGATGCTACGTAATA 57.667 37.500 5.19 0.00 38.65 0.98
4152 5943 6.929625 AGCTCATCAAGATGCTACGTAATAT 58.070 36.000 5.19 0.00 38.65 1.28
4153 5944 6.810676 AGCTCATCAAGATGCTACGTAATATG 59.189 38.462 5.19 0.00 38.65 1.78
4154 5945 6.587990 GCTCATCAAGATGCTACGTAATATGT 59.412 38.462 5.19 0.00 38.65 2.29
4155 5946 7.411264 GCTCATCAAGATGCTACGTAATATGTG 60.411 40.741 5.19 0.00 38.65 3.21
4156 5947 7.433680 TCATCAAGATGCTACGTAATATGTGT 58.566 34.615 5.19 0.00 38.65 3.72
4157 5948 7.926018 TCATCAAGATGCTACGTAATATGTGTT 59.074 33.333 5.19 0.00 38.65 3.32
4158 5949 7.463469 TCAAGATGCTACGTAATATGTGTTG 57.537 36.000 0.00 0.00 0.00 3.33
4159 5950 7.039270 TCAAGATGCTACGTAATATGTGTTGT 58.961 34.615 0.00 0.00 0.00 3.32
4160 5951 8.192110 TCAAGATGCTACGTAATATGTGTTGTA 58.808 33.333 0.00 0.00 0.00 2.41
4161 5952 7.925703 AGATGCTACGTAATATGTGTTGTAC 57.074 36.000 0.00 0.00 0.00 2.90
4162 5953 7.713750 AGATGCTACGTAATATGTGTTGTACT 58.286 34.615 0.00 0.00 0.00 2.73
4163 5954 7.861372 AGATGCTACGTAATATGTGTTGTACTC 59.139 37.037 0.00 0.00 0.00 2.59
4164 5955 6.267817 TGCTACGTAATATGTGTTGTACTCC 58.732 40.000 0.00 0.00 0.00 3.85
4165 5956 5.689068 GCTACGTAATATGTGTTGTACTCCC 59.311 44.000 0.00 0.00 0.00 4.30
4166 5957 5.927281 ACGTAATATGTGTTGTACTCCCT 57.073 39.130 0.00 0.00 0.00 4.20
4167 5958 5.899299 ACGTAATATGTGTTGTACTCCCTC 58.101 41.667 0.00 0.00 0.00 4.30
4168 5959 5.655532 ACGTAATATGTGTTGTACTCCCTCT 59.344 40.000 0.00 0.00 0.00 3.69
4169 5960 5.977725 CGTAATATGTGTTGTACTCCCTCTG 59.022 44.000 0.00 0.00 0.00 3.35
4170 5961 6.405508 CGTAATATGTGTTGTACTCCCTCTGT 60.406 42.308 0.00 0.00 0.00 3.41
4171 5962 3.963428 ATGTGTTGTACTCCCTCTGTC 57.037 47.619 0.00 0.00 0.00 3.51
4172 5963 1.968493 TGTGTTGTACTCCCTCTGTCC 59.032 52.381 0.00 0.00 0.00 4.02
4173 5964 1.275573 GTGTTGTACTCCCTCTGTCCC 59.724 57.143 0.00 0.00 0.00 4.46
4174 5965 1.132977 TGTTGTACTCCCTCTGTCCCA 60.133 52.381 0.00 0.00 0.00 4.37
4175 5966 2.188817 GTTGTACTCCCTCTGTCCCAT 58.811 52.381 0.00 0.00 0.00 4.00
4176 5967 3.245839 TGTTGTACTCCCTCTGTCCCATA 60.246 47.826 0.00 0.00 0.00 2.74
4177 5968 3.769189 TGTACTCCCTCTGTCCCATAA 57.231 47.619 0.00 0.00 0.00 1.90
4178 5969 4.280789 TGTACTCCCTCTGTCCCATAAT 57.719 45.455 0.00 0.00 0.00 1.28
4179 5970 5.412617 TGTACTCCCTCTGTCCCATAATA 57.587 43.478 0.00 0.00 0.00 0.98
4180 5971 5.977533 TGTACTCCCTCTGTCCCATAATAT 58.022 41.667 0.00 0.00 0.00 1.28
4181 5972 7.111136 TGTACTCCCTCTGTCCCATAATATA 57.889 40.000 0.00 0.00 0.00 0.86
4182 5973 7.541074 TGTACTCCCTCTGTCCCATAATATAA 58.459 38.462 0.00 0.00 0.00 0.98
4183 5974 7.674348 TGTACTCCCTCTGTCCCATAATATAAG 59.326 40.741 0.00 0.00 0.00 1.73
4184 5975 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
4185 5976 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
4186 5977 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
4187 5978 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
4188 5979 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
4189 5980 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
4190 5981 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
4191 5982 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
4192 5983 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
4193 5984 9.931210 CTGTCCCATAATATAAGAACGTTTTTC 57.069 33.333 7.42 0.00 0.00 2.29
4194 5985 9.451002 TGTCCCATAATATAAGAACGTTTTTCA 57.549 29.630 7.42 0.00 0.00 2.69
4206 5997 7.273188 AGAACGTTTTTCAAACTGTTTTAGC 57.727 32.000 0.46 0.00 0.00 3.09
4207 5998 7.088272 AGAACGTTTTTCAAACTGTTTTAGCT 58.912 30.769 0.46 0.00 0.00 3.32
4208 5999 7.597369 AGAACGTTTTTCAAACTGTTTTAGCTT 59.403 29.630 0.46 0.00 0.00 3.74
4209 6000 8.745464 AACGTTTTTCAAACTGTTTTAGCTTA 57.255 26.923 2.41 0.00 0.00 3.09
4210 6001 8.745464 ACGTTTTTCAAACTGTTTTAGCTTAA 57.255 26.923 2.41 0.00 0.00 1.85
4211 6002 9.194271 ACGTTTTTCAAACTGTTTTAGCTTAAA 57.806 25.926 2.41 0.00 0.00 1.52
4217 6008 9.699703 TTCAAACTGTTTTAGCTTAAAAAGTGT 57.300 25.926 19.08 12.55 39.15 3.55
4218 6009 9.699703 TCAAACTGTTTTAGCTTAAAAAGTGTT 57.300 25.926 19.08 13.09 39.15 3.32
4219 6010 9.952341 CAAACTGTTTTAGCTTAAAAAGTGTTC 57.048 29.630 19.08 0.00 39.15 3.18
4220 6011 9.923143 AAACTGTTTTAGCTTAAAAAGTGTTCT 57.077 25.926 19.08 3.73 39.15 3.01
4221 6012 9.923143 AACTGTTTTAGCTTAAAAAGTGTTCTT 57.077 25.926 19.08 3.40 39.15 2.52
4235 6026 8.446599 AAAAGTGTTCTTATATTATGGGACGG 57.553 34.615 0.00 0.00 33.09 4.79
4236 6027 6.989155 AGTGTTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
4237 6028 6.994221 AGTGTTCTTATATTATGGGACGGAG 58.006 40.000 0.00 0.00 0.00 4.63
4238 6029 6.014499 AGTGTTCTTATATTATGGGACGGAGG 60.014 42.308 0.00 0.00 0.00 4.30
4239 6030 5.247564 TGTTCTTATATTATGGGACGGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
4240 6031 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
4241 6032 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4242 6033 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
4243 6034 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
4244 6035 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
4245 6036 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
4246 6037 0.338814 ATGGGACGGAGGGAGTACTT 59.661 55.000 0.00 0.00 0.00 2.24
4247 6038 0.115745 TGGGACGGAGGGAGTACTTT 59.884 55.000 0.00 0.00 0.00 2.66
4248 6039 1.358787 TGGGACGGAGGGAGTACTTTA 59.641 52.381 0.00 0.00 0.00 1.85
4249 6040 2.023695 TGGGACGGAGGGAGTACTTTAT 60.024 50.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.046217 GTTGCTCTCCCCGAACCC 60.046 66.667 0.00 0.00 0.00 4.11
1 2 1.880819 TACGTTGCTCTCCCCGAACC 61.881 60.000 0.00 0.00 0.00 3.62
2 3 0.037975 TTACGTTGCTCTCCCCGAAC 60.038 55.000 0.00 0.00 0.00 3.95
4 5 0.174845 CATTACGTTGCTCTCCCCGA 59.825 55.000 0.00 0.00 0.00 5.14
5 6 0.108329 ACATTACGTTGCTCTCCCCG 60.108 55.000 0.00 0.00 0.00 5.73
6 7 2.167900 AGTACATTACGTTGCTCTCCCC 59.832 50.000 0.00 0.00 0.00 4.81
7 8 3.445857 GAGTACATTACGTTGCTCTCCC 58.554 50.000 0.00 0.00 0.00 4.30
11 12 2.159338 TCCCGAGTACATTACGTTGCTC 60.159 50.000 0.00 0.00 0.00 4.26
12 13 1.820519 TCCCGAGTACATTACGTTGCT 59.179 47.619 0.00 0.00 0.00 3.91
14 15 3.119743 TGACTCCCGAGTACATTACGTTG 60.120 47.826 0.00 0.00 42.66 4.10
15 16 3.084039 TGACTCCCGAGTACATTACGTT 58.916 45.455 0.00 0.00 42.66 3.99
16 17 2.681848 CTGACTCCCGAGTACATTACGT 59.318 50.000 0.00 0.00 42.66 3.57
17 18 2.033049 CCTGACTCCCGAGTACATTACG 59.967 54.545 0.00 0.00 42.66 3.18
18 19 2.361438 CCCTGACTCCCGAGTACATTAC 59.639 54.545 0.00 0.00 42.66 1.89
19 20 2.242965 TCCCTGACTCCCGAGTACATTA 59.757 50.000 0.00 0.00 42.66 1.90
20 21 1.006758 TCCCTGACTCCCGAGTACATT 59.993 52.381 0.00 0.00 42.66 2.71
21 22 0.629596 TCCCTGACTCCCGAGTACAT 59.370 55.000 0.00 0.00 42.66 2.29
24 25 0.547075 CTCTCCCTGACTCCCGAGTA 59.453 60.000 0.00 0.00 42.66 2.59
25 26 1.208844 TCTCTCCCTGACTCCCGAGT 61.209 60.000 0.00 0.00 45.84 4.18
26 27 0.465460 CTCTCTCCCTGACTCCCGAG 60.465 65.000 0.00 0.00 0.00 4.63
27 28 0.914902 TCTCTCTCCCTGACTCCCGA 60.915 60.000 0.00 0.00 0.00 5.14
28 29 0.750182 GTCTCTCTCCCTGACTCCCG 60.750 65.000 0.00 0.00 0.00 5.14
29 30 0.750182 CGTCTCTCTCCCTGACTCCC 60.750 65.000 0.00 0.00 0.00 4.30
30 31 0.034863 ACGTCTCTCTCCCTGACTCC 60.035 60.000 0.00 0.00 0.00 3.85
33 34 1.673920 GATCACGTCTCTCTCCCTGAC 59.326 57.143 0.00 0.00 0.00 3.51
35 36 1.675483 CAGATCACGTCTCTCTCCCTG 59.325 57.143 0.00 0.00 34.00 4.45
37 38 1.028905 CCAGATCACGTCTCTCTCCC 58.971 60.000 0.00 0.00 34.00 4.30
38 39 1.028905 CCCAGATCACGTCTCTCTCC 58.971 60.000 0.00 0.00 34.00 3.71
41 42 1.439644 GCCCCAGATCACGTCTCTC 59.560 63.158 0.00 0.00 34.00 3.20
42 43 2.418910 CGCCCCAGATCACGTCTCT 61.419 63.158 0.00 0.00 34.00 3.10
43 44 2.105128 CGCCCCAGATCACGTCTC 59.895 66.667 0.00 0.00 34.00 3.36
46 47 3.461773 CCTCGCCCCAGATCACGT 61.462 66.667 0.00 0.00 0.00 4.49
47 48 4.227134 CCCTCGCCCCAGATCACG 62.227 72.222 0.00 0.00 0.00 4.35
48 49 3.866582 CCCCTCGCCCCAGATCAC 61.867 72.222 0.00 0.00 0.00 3.06
50 51 3.866582 CACCCCTCGCCCCAGATC 61.867 72.222 0.00 0.00 0.00 2.75
59 60 3.077556 CACTCTCCCCACCCCTCG 61.078 72.222 0.00 0.00 0.00 4.63
60 61 2.689034 CCACTCTCCCCACCCCTC 60.689 72.222 0.00 0.00 0.00 4.30
61 62 4.354943 CCCACTCTCCCCACCCCT 62.355 72.222 0.00 0.00 0.00 4.79
62 63 4.348495 TCCCACTCTCCCCACCCC 62.348 72.222 0.00 0.00 0.00 4.95
64 65 3.391382 CGTCCCACTCTCCCCACC 61.391 72.222 0.00 0.00 0.00 4.61
65 66 2.603776 ACGTCCCACTCTCCCCAC 60.604 66.667 0.00 0.00 0.00 4.61
66 67 2.603473 CACGTCCCACTCTCCCCA 60.603 66.667 0.00 0.00 0.00 4.96
67 68 3.391382 CCACGTCCCACTCTCCCC 61.391 72.222 0.00 0.00 0.00 4.81
68 69 1.911766 TTCCACGTCCCACTCTCCC 60.912 63.158 0.00 0.00 0.00 4.30
69 70 1.292541 GTTCCACGTCCCACTCTCC 59.707 63.158 0.00 0.00 0.00 3.71
70 71 1.080705 CGTTCCACGTCCCACTCTC 60.081 63.158 0.00 0.00 36.74 3.20
81 82 0.235665 CAGATGCACACACGTTCCAC 59.764 55.000 0.00 0.00 0.00 4.02
82 83 0.179059 ACAGATGCACACACGTTCCA 60.179 50.000 0.00 0.00 0.00 3.53
83 84 0.235665 CACAGATGCACACACGTTCC 59.764 55.000 0.00 0.00 0.00 3.62
84 85 0.235665 CCACAGATGCACACACGTTC 59.764 55.000 0.00 0.00 0.00 3.95
85 86 1.785041 GCCACAGATGCACACACGTT 61.785 55.000 0.00 0.00 0.00 3.99
88 89 1.300971 ATCGCCACAGATGCACACAC 61.301 55.000 0.00 0.00 0.00 3.82
89 90 1.003476 ATCGCCACAGATGCACACA 60.003 52.632 0.00 0.00 0.00 3.72
90 91 1.426621 CATCGCCACAGATGCACAC 59.573 57.895 0.00 0.00 41.09 3.82
112 113 1.302192 CCCCGCTCGGAACAGAAAA 60.302 57.895 10.28 0.00 37.50 2.29
114 115 2.602267 TCCCCGCTCGGAACAGAA 60.602 61.111 10.28 0.00 37.50 3.02
115 116 3.379445 GTCCCCGCTCGGAACAGA 61.379 66.667 10.28 0.00 37.50 3.41
116 117 4.796231 CGTCCCCGCTCGGAACAG 62.796 72.222 10.28 1.71 37.50 3.16
135 136 3.292159 AAAAACCGCCACGCCCTC 61.292 61.111 0.00 0.00 0.00 4.30
153 154 0.038526 GTCCTCGCTCGGAACAGAAA 60.039 55.000 0.00 0.00 34.20 2.52
156 157 2.202492 CGTCCTCGCTCGGAACAG 60.202 66.667 0.00 0.00 34.20 3.16
163 164 3.213402 CTCCTCCCGTCCTCGCTC 61.213 72.222 0.00 0.00 35.54 5.03
164 165 4.824515 CCTCCTCCCGTCCTCGCT 62.825 72.222 0.00 0.00 35.54 4.93
166 167 2.829458 GACCTCCTCCCGTCCTCG 60.829 72.222 0.00 0.00 0.00 4.63
167 168 2.442458 GGACCTCCTCCCGTCCTC 60.442 72.222 0.00 0.00 44.40 3.71
171 172 2.365635 CCATGGACCTCCTCCCGT 60.366 66.667 5.56 0.00 38.49 5.28
173 174 3.493303 GCCCATGGACCTCCTCCC 61.493 72.222 15.22 0.00 38.49 4.30
174 175 3.493303 GGCCCATGGACCTCCTCC 61.493 72.222 15.22 0.00 39.97 4.30
175 176 3.866582 CGGCCCATGGACCTCCTC 61.867 72.222 15.91 0.00 36.82 3.71
176 177 3.810931 TATTCGGCCCATGGACCTCCT 62.811 57.143 15.91 1.63 36.82 3.69
177 178 1.415672 TATTCGGCCCATGGACCTCC 61.416 60.000 15.91 8.63 0.00 4.30
178 179 0.693049 ATATTCGGCCCATGGACCTC 59.307 55.000 15.91 0.31 0.00 3.85
179 180 0.693049 GATATTCGGCCCATGGACCT 59.307 55.000 15.91 0.00 0.00 3.85
180 181 0.673644 CGATATTCGGCCCATGGACC 60.674 60.000 15.22 11.03 36.00 4.46
181 182 2.840974 CGATATTCGGCCCATGGAC 58.159 57.895 15.22 0.00 36.00 4.02
198 199 2.436646 AAGCCGGCAACTCATCCG 60.437 61.111 31.54 0.00 44.89 4.18
199 200 3.056313 GCAAGCCGGCAACTCATCC 62.056 63.158 31.54 3.58 0.00 3.51
200 201 2.486966 GCAAGCCGGCAACTCATC 59.513 61.111 31.54 6.14 0.00 2.92
201 202 3.434319 CGCAAGCCGGCAACTCAT 61.434 61.111 31.54 2.66 0.00 2.90
211 212 2.649129 AAAATCCAGCCCGCAAGCC 61.649 57.895 0.00 0.00 0.00 4.35
212 213 1.446618 CAAAATCCAGCCCGCAAGC 60.447 57.895 0.00 0.00 0.00 4.01
213 214 0.388907 CACAAAATCCAGCCCGCAAG 60.389 55.000 0.00 0.00 0.00 4.01
214 215 1.664873 CACAAAATCCAGCCCGCAA 59.335 52.632 0.00 0.00 0.00 4.85
215 216 2.929903 GCACAAAATCCAGCCCGCA 61.930 57.895 0.00 0.00 0.00 5.69
216 217 2.125952 GCACAAAATCCAGCCCGC 60.126 61.111 0.00 0.00 0.00 6.13
217 218 2.179018 CGCACAAAATCCAGCCCG 59.821 61.111 0.00 0.00 0.00 6.13
218 219 2.573340 CCGCACAAAATCCAGCCC 59.427 61.111 0.00 0.00 0.00 5.19
219 220 2.573340 CCCGCACAAAATCCAGCC 59.427 61.111 0.00 0.00 0.00 4.85
220 221 2.125952 GCCCGCACAAAATCCAGC 60.126 61.111 0.00 0.00 0.00 4.85
221 222 2.179018 CGCCCGCACAAAATCCAG 59.821 61.111 0.00 0.00 0.00 3.86
222 223 2.596046 ACGCCCGCACAAAATCCA 60.596 55.556 0.00 0.00 0.00 3.41
223 224 2.126502 CACGCCCGCACAAAATCC 60.127 61.111 0.00 0.00 0.00 3.01
224 225 1.729131 CACACGCCCGCACAAAATC 60.729 57.895 0.00 0.00 0.00 2.17
225 226 2.334653 CACACGCCCGCACAAAAT 59.665 55.556 0.00 0.00 0.00 1.82
226 227 3.893763 CCACACGCCCGCACAAAA 61.894 61.111 0.00 0.00 0.00 2.44
239 240 2.927856 ATCCCGCAGTGTCCCACA 60.928 61.111 0.00 0.00 36.74 4.17
240 241 2.436646 CATCCCGCAGTGTCCCAC 60.437 66.667 0.00 0.00 34.10 4.61
241 242 3.716195 CCATCCCGCAGTGTCCCA 61.716 66.667 0.00 0.00 0.00 4.37
243 244 4.101448 AGCCATCCCGCAGTGTCC 62.101 66.667 0.00 0.00 0.00 4.02
244 245 2.821366 CAGCCATCCCGCAGTGTC 60.821 66.667 0.00 0.00 0.00 3.67
245 246 3.612247 GACAGCCATCCCGCAGTGT 62.612 63.158 0.00 0.00 0.00 3.55
246 247 2.821366 GACAGCCATCCCGCAGTG 60.821 66.667 0.00 0.00 0.00 3.66
247 248 4.457496 CGACAGCCATCCCGCAGT 62.457 66.667 0.00 0.00 0.00 4.40
248 249 3.076258 TACGACAGCCATCCCGCAG 62.076 63.158 0.00 0.00 0.00 5.18
249 250 3.071837 TACGACAGCCATCCCGCA 61.072 61.111 0.00 0.00 0.00 5.69
250 251 2.585247 GTACGACAGCCATCCCGC 60.585 66.667 0.00 0.00 0.00 6.13
251 252 2.278596 CGTACGACAGCCATCCCG 60.279 66.667 10.44 0.00 0.00 5.14
252 253 1.065928 CTCGTACGACAGCCATCCC 59.934 63.158 15.28 0.00 0.00 3.85
253 254 1.065928 CCTCGTACGACAGCCATCC 59.934 63.158 15.28 0.00 0.00 3.51
254 255 1.589196 GCCTCGTACGACAGCCATC 60.589 63.158 15.28 0.00 0.00 3.51
255 256 2.494918 GCCTCGTACGACAGCCAT 59.505 61.111 15.28 0.00 0.00 4.40
256 257 4.111016 CGCCTCGTACGACAGCCA 62.111 66.667 22.96 1.51 0.00 4.75
257 258 4.849329 CCGCCTCGTACGACAGCC 62.849 72.222 22.96 9.01 0.00 4.85
258 259 4.849329 CCCGCCTCGTACGACAGC 62.849 72.222 15.28 18.47 0.00 4.40
259 260 4.189188 CCCCGCCTCGTACGACAG 62.189 72.222 15.28 10.01 0.00 3.51
262 263 4.511246 ATCCCCCGCCTCGTACGA 62.511 66.667 18.41 18.41 0.00 3.43
263 264 4.280494 CATCCCCCGCCTCGTACG 62.280 72.222 9.53 9.53 0.00 3.67
264 265 3.925090 CCATCCCCCGCCTCGTAC 61.925 72.222 0.00 0.00 0.00 3.67
265 266 3.682644 TTCCATCCCCCGCCTCGTA 62.683 63.158 0.00 0.00 0.00 3.43
267 268 4.547367 GTTCCATCCCCCGCCTCG 62.547 72.222 0.00 0.00 0.00 4.63
268 269 4.547367 CGTTCCATCCCCCGCCTC 62.547 72.222 0.00 0.00 0.00 4.70
270 271 4.547367 CTCGTTCCATCCCCCGCC 62.547 72.222 0.00 0.00 0.00 6.13
271 272 4.547367 CCTCGTTCCATCCCCCGC 62.547 72.222 0.00 0.00 0.00 6.13
272 273 3.081409 ACCTCGTTCCATCCCCCG 61.081 66.667 0.00 0.00 0.00 5.73
273 274 2.590092 CACCTCGTTCCATCCCCC 59.410 66.667 0.00 0.00 0.00 5.40
274 275 2.253403 GACCACCTCGTTCCATCCCC 62.253 65.000 0.00 0.00 0.00 4.81
275 276 1.221021 GACCACCTCGTTCCATCCC 59.779 63.158 0.00 0.00 0.00 3.85
276 277 1.153628 CGACCACCTCGTTCCATCC 60.154 63.158 0.00 0.00 37.64 3.51
277 278 0.245539 TTCGACCACCTCGTTCCATC 59.754 55.000 0.00 0.00 43.45 3.51
278 279 0.037605 GTTCGACCACCTCGTTCCAT 60.038 55.000 0.00 0.00 43.45 3.41
279 280 1.364901 GTTCGACCACCTCGTTCCA 59.635 57.895 0.00 0.00 43.45 3.53
280 281 1.373873 GGTTCGACCACCTCGTTCC 60.374 63.158 0.00 0.00 43.45 3.62
281 282 1.364901 TGGTTCGACCACCTCGTTC 59.635 57.895 7.76 0.00 44.79 3.95
282 283 3.541072 TGGTTCGACCACCTCGTT 58.459 55.556 7.76 0.00 44.79 3.85
292 293 3.096541 GAACGTCGTGATGGTTCGA 57.903 52.632 0.00 0.00 31.82 3.71
294 295 1.582502 GATCGAACGTCGTGATGGTTC 59.417 52.381 0.00 6.67 41.35 3.62
295 296 1.625616 GATCGAACGTCGTGATGGTT 58.374 50.000 0.00 0.00 41.35 3.67
296 297 0.179145 GGATCGAACGTCGTGATGGT 60.179 55.000 0.00 0.00 41.35 3.55
297 298 0.870307 GGGATCGAACGTCGTGATGG 60.870 60.000 0.00 0.00 41.35 3.51
298 299 0.870307 GGGGATCGAACGTCGTGATG 60.870 60.000 0.00 0.00 41.35 3.07
299 300 1.035932 AGGGGATCGAACGTCGTGAT 61.036 55.000 0.00 0.00 41.35 3.06
300 301 1.246056 AAGGGGATCGAACGTCGTGA 61.246 55.000 0.00 0.00 41.35 4.35
301 302 0.389426 AAAGGGGATCGAACGTCGTG 60.389 55.000 0.00 0.00 41.35 4.35
302 303 1.133790 CTAAAGGGGATCGAACGTCGT 59.866 52.381 0.00 0.00 41.35 4.34
303 304 1.133790 ACTAAAGGGGATCGAACGTCG 59.866 52.381 0.00 0.00 42.10 5.12
304 305 2.955477 ACTAAAGGGGATCGAACGTC 57.045 50.000 0.00 0.00 0.00 4.34
305 306 3.359950 ACTACTAAAGGGGATCGAACGT 58.640 45.455 0.00 0.00 0.00 3.99
306 307 4.818546 TCTACTACTAAAGGGGATCGAACG 59.181 45.833 0.00 0.00 0.00 3.95
307 308 6.060788 TCTCTACTACTAAAGGGGATCGAAC 58.939 44.000 0.00 0.00 0.00 3.95
308 309 6.257994 TCTCTACTACTAAAGGGGATCGAA 57.742 41.667 0.00 0.00 0.00 3.71
309 310 5.901413 TCTCTACTACTAAAGGGGATCGA 57.099 43.478 0.00 0.00 0.00 3.59
310 311 7.230913 TCAAATCTCTACTACTAAAGGGGATCG 59.769 40.741 0.00 0.00 0.00 3.69
311 312 8.480133 TCAAATCTCTACTACTAAAGGGGATC 57.520 38.462 0.00 0.00 0.00 3.36
312 313 7.511028 CCTCAAATCTCTACTACTAAAGGGGAT 59.489 40.741 0.00 0.00 0.00 3.85
313 314 6.839657 CCTCAAATCTCTACTACTAAAGGGGA 59.160 42.308 0.00 0.00 0.00 4.81
314 315 6.042208 CCCTCAAATCTCTACTACTAAAGGGG 59.958 46.154 0.00 0.00 35.87 4.79
315 316 6.042208 CCCCTCAAATCTCTACTACTAAAGGG 59.958 46.154 0.00 0.00 38.62 3.95
316 317 6.042208 CCCCCTCAAATCTCTACTACTAAAGG 59.958 46.154 0.00 0.00 0.00 3.11
317 318 6.839657 TCCCCCTCAAATCTCTACTACTAAAG 59.160 42.308 0.00 0.00 0.00 1.85
318 319 6.748969 TCCCCCTCAAATCTCTACTACTAAA 58.251 40.000 0.00 0.00 0.00 1.85
319 320 6.351317 TCCCCCTCAAATCTCTACTACTAA 57.649 41.667 0.00 0.00 0.00 2.24
320 321 6.351317 TTCCCCCTCAAATCTCTACTACTA 57.649 41.667 0.00 0.00 0.00 1.82
321 322 4.901785 TCCCCCTCAAATCTCTACTACT 57.098 45.455 0.00 0.00 0.00 2.57
322 323 5.952347 TTTCCCCCTCAAATCTCTACTAC 57.048 43.478 0.00 0.00 0.00 2.73
323 324 6.030082 AGTTTTCCCCCTCAAATCTCTACTA 58.970 40.000 0.00 0.00 0.00 1.82
324 325 4.852697 AGTTTTCCCCCTCAAATCTCTACT 59.147 41.667 0.00 0.00 0.00 2.57
325 326 5.180810 AGTTTTCCCCCTCAAATCTCTAC 57.819 43.478 0.00 0.00 0.00 2.59
326 327 7.849904 AGTATAGTTTTCCCCCTCAAATCTCTA 59.150 37.037 0.00 0.00 0.00 2.43
327 328 6.678857 AGTATAGTTTTCCCCCTCAAATCTCT 59.321 38.462 0.00 0.00 0.00 3.10
328 329 6.901300 AGTATAGTTTTCCCCCTCAAATCTC 58.099 40.000 0.00 0.00 0.00 2.75
329 330 6.910259 AGTATAGTTTTCCCCCTCAAATCT 57.090 37.500 0.00 0.00 0.00 2.40
330 331 7.834681 AGAAAGTATAGTTTTCCCCCTCAAATC 59.165 37.037 6.99 0.00 35.62 2.17
331 332 7.709601 AGAAAGTATAGTTTTCCCCCTCAAAT 58.290 34.615 6.99 0.00 35.62 2.32
332 333 7.098845 AGAAAGTATAGTTTTCCCCCTCAAA 57.901 36.000 6.99 0.00 35.62 2.69
333 334 6.713731 AGAAAGTATAGTTTTCCCCCTCAA 57.286 37.500 6.99 0.00 35.62 3.02
334 335 6.273730 TGAAGAAAGTATAGTTTTCCCCCTCA 59.726 38.462 6.99 0.00 35.62 3.86
335 336 6.718294 TGAAGAAAGTATAGTTTTCCCCCTC 58.282 40.000 6.99 0.00 35.62 4.30
336 337 6.713731 TGAAGAAAGTATAGTTTTCCCCCT 57.286 37.500 6.99 0.00 35.62 4.79
337 338 7.173032 TCTTGAAGAAAGTATAGTTTTCCCCC 58.827 38.462 6.99 0.00 37.18 5.40
338 339 8.631480 TTCTTGAAGAAAGTATAGTTTTCCCC 57.369 34.615 4.94 0.00 37.18 4.81
364 365 3.344515 GACGGGCCTTCTAGACATTTTT 58.655 45.455 0.84 0.00 0.00 1.94
365 366 2.677037 CGACGGGCCTTCTAGACATTTT 60.677 50.000 8.53 0.00 0.00 1.82
366 367 1.134788 CGACGGGCCTTCTAGACATTT 60.135 52.381 8.53 0.00 0.00 2.32
367 368 0.460311 CGACGGGCCTTCTAGACATT 59.540 55.000 8.53 0.00 0.00 2.71
368 369 1.392710 CCGACGGGCCTTCTAGACAT 61.393 60.000 5.81 0.00 0.00 3.06
369 370 2.050350 CCGACGGGCCTTCTAGACA 61.050 63.158 5.81 0.00 0.00 3.41
370 371 2.783288 CCCGACGGGCCTTCTAGAC 61.783 68.421 22.37 0.00 35.35 2.59
371 372 2.441532 CCCGACGGGCCTTCTAGA 60.442 66.667 22.37 0.00 35.35 2.43
441 443 9.307121 CTCGTCTCTGTAATTTCATTTAGATGT 57.693 33.333 0.00 0.00 34.77 3.06
442 444 8.272176 GCTCGTCTCTGTAATTTCATTTAGATG 58.728 37.037 0.00 0.00 34.46 2.90
443 445 7.168302 CGCTCGTCTCTGTAATTTCATTTAGAT 59.832 37.037 0.00 0.00 0.00 1.98
444 446 6.472486 CGCTCGTCTCTGTAATTTCATTTAGA 59.528 38.462 0.00 0.00 0.00 2.10
445 447 6.472486 TCGCTCGTCTCTGTAATTTCATTTAG 59.528 38.462 0.00 0.00 0.00 1.85
446 448 6.327154 TCGCTCGTCTCTGTAATTTCATTTA 58.673 36.000 0.00 0.00 0.00 1.40
447 449 5.168569 TCGCTCGTCTCTGTAATTTCATTT 58.831 37.500 0.00 0.00 0.00 2.32
448 450 4.744570 TCGCTCGTCTCTGTAATTTCATT 58.255 39.130 0.00 0.00 0.00 2.57
449 451 4.096532 TCTCGCTCGTCTCTGTAATTTCAT 59.903 41.667 0.00 0.00 0.00 2.57
450 452 3.439129 TCTCGCTCGTCTCTGTAATTTCA 59.561 43.478 0.00 0.00 0.00 2.69
451 453 4.017380 TCTCGCTCGTCTCTGTAATTTC 57.983 45.455 0.00 0.00 0.00 2.17
452 454 3.690139 TCTCTCGCTCGTCTCTGTAATTT 59.310 43.478 0.00 0.00 0.00 1.82
453 455 3.064271 GTCTCTCGCTCGTCTCTGTAATT 59.936 47.826 0.00 0.00 0.00 1.40
454 456 2.610374 GTCTCTCGCTCGTCTCTGTAAT 59.390 50.000 0.00 0.00 0.00 1.89
455 457 2.001159 GTCTCTCGCTCGTCTCTGTAA 58.999 52.381 0.00 0.00 0.00 2.41
456 458 1.205179 AGTCTCTCGCTCGTCTCTGTA 59.795 52.381 0.00 0.00 0.00 2.74
473 475 4.888823 AGTGTAAACCCTAGCTAGCTAGTC 59.111 45.833 37.50 23.89 43.22 2.59
474 476 4.869451 AGTGTAAACCCTAGCTAGCTAGT 58.131 43.478 37.50 26.46 43.22 2.57
475 477 5.009210 CAGAGTGTAAACCCTAGCTAGCTAG 59.991 48.000 35.39 35.39 44.07 3.42
476 478 4.888239 CAGAGTGTAAACCCTAGCTAGCTA 59.112 45.833 22.85 22.85 0.00 3.32
477 479 3.702045 CAGAGTGTAAACCCTAGCTAGCT 59.298 47.826 23.12 23.12 0.00 3.32
478 480 3.738590 GCAGAGTGTAAACCCTAGCTAGC 60.739 52.174 15.74 6.62 0.00 3.42
499 501 0.106519 AGAGGAGAGGAGAGCAGAGC 60.107 60.000 0.00 0.00 0.00 4.09
504 506 0.178990 GGAGGAGAGGAGAGGAGAGC 60.179 65.000 0.00 0.00 0.00 4.09
566 579 3.679824 AGAGGAGAATCGAAAAACGGT 57.320 42.857 0.00 0.00 42.82 4.83
619 635 4.722008 GGAACCACCGCAACAAAC 57.278 55.556 0.00 0.00 0.00 2.93
667 685 7.912056 ATCAAGAACAAGAAATCGAATCAGA 57.088 32.000 0.00 0.00 0.00 3.27
676 694 8.337118 TCCCCTATCTATCAAGAACAAGAAAT 57.663 34.615 0.00 0.00 34.73 2.17
720 738 8.940397 AATAACTAAGTTTATGGATGGGGATG 57.060 34.615 0.00 0.00 0.00 3.51
743 761 5.503002 ACCGGGTTTACAGCATTAACTAAT 58.497 37.500 6.32 0.00 0.00 1.73
747 765 4.256110 ACTACCGGGTTTACAGCATTAAC 58.744 43.478 4.31 0.00 0.00 2.01
749 767 5.599656 AGATACTACCGGGTTTACAGCATTA 59.400 40.000 4.31 0.00 0.00 1.90
751 769 3.965347 AGATACTACCGGGTTTACAGCAT 59.035 43.478 4.31 0.00 0.00 3.79
752 770 3.368248 AGATACTACCGGGTTTACAGCA 58.632 45.455 4.31 0.00 0.00 4.41
753 771 4.117685 CAAGATACTACCGGGTTTACAGC 58.882 47.826 4.31 0.00 0.00 4.40
754 772 5.334724 ACAAGATACTACCGGGTTTACAG 57.665 43.478 4.31 0.00 0.00 2.74
755 773 5.481473 AGAACAAGATACTACCGGGTTTACA 59.519 40.000 4.31 0.00 0.00 2.41
756 774 5.970592 AGAACAAGATACTACCGGGTTTAC 58.029 41.667 4.31 0.00 0.00 2.01
757 775 6.211184 TCAAGAACAAGATACTACCGGGTTTA 59.789 38.462 4.31 0.00 0.00 2.01
758 776 5.012354 TCAAGAACAAGATACTACCGGGTTT 59.988 40.000 4.31 0.00 0.00 3.27
759 777 4.529377 TCAAGAACAAGATACTACCGGGTT 59.471 41.667 4.31 0.00 0.00 4.11
760 778 4.091549 TCAAGAACAAGATACTACCGGGT 58.908 43.478 6.32 4.46 0.00 5.28
761 779 4.730949 TCAAGAACAAGATACTACCGGG 57.269 45.455 6.32 0.00 0.00 5.73
762 780 7.273320 TCTATCAAGAACAAGATACTACCGG 57.727 40.000 0.00 0.00 0.00 5.28
763 781 7.013464 ACCTCTATCAAGAACAAGATACTACCG 59.987 40.741 0.00 0.00 0.00 4.02
764 782 8.240267 ACCTCTATCAAGAACAAGATACTACC 57.760 38.462 0.00 0.00 0.00 3.18
770 788 9.482175 ACTTACTACCTCTATCAAGAACAAGAT 57.518 33.333 0.00 0.00 0.00 2.40
771 789 8.880991 ACTTACTACCTCTATCAAGAACAAGA 57.119 34.615 0.00 0.00 0.00 3.02
774 792 8.684520 GCTTACTTACTACCTCTATCAAGAACA 58.315 37.037 0.00 0.00 0.00 3.18
775 793 8.905850 AGCTTACTTACTACCTCTATCAAGAAC 58.094 37.037 0.00 0.00 0.00 3.01
776 794 9.476928 AAGCTTACTTACTACCTCTATCAAGAA 57.523 33.333 0.00 0.00 33.13 2.52
777 795 9.476928 AAAGCTTACTTACTACCTCTATCAAGA 57.523 33.333 0.00 0.00 34.05 3.02
780 798 9.871238 CAAAAAGCTTACTTACTACCTCTATCA 57.129 33.333 0.00 0.00 34.05 2.15
781 799 8.819015 GCAAAAAGCTTACTTACTACCTCTATC 58.181 37.037 0.00 0.00 41.15 2.08
782 800 7.769507 GGCAAAAAGCTTACTTACTACCTCTAT 59.230 37.037 0.00 0.00 44.79 1.98
786 804 5.705905 CAGGCAAAAAGCTTACTTACTACCT 59.294 40.000 0.00 0.00 44.79 3.08
787 805 5.472478 ACAGGCAAAAAGCTTACTTACTACC 59.528 40.000 0.00 0.00 44.79 3.18
792 810 7.883311 AGAAGATACAGGCAAAAAGCTTACTTA 59.117 33.333 0.00 0.00 44.79 2.24
807 825 9.829507 AATATCTGTTCAAGAAGAAGATACAGG 57.170 33.333 13.32 0.00 38.79 4.00
819 860 8.548025 TGGGTTCAATCTAATATCTGTTCAAGA 58.452 33.333 0.00 0.00 39.94 3.02
820 861 8.737168 TGGGTTCAATCTAATATCTGTTCAAG 57.263 34.615 0.00 0.00 0.00 3.02
825 866 7.861629 TGAGTTGGGTTCAATCTAATATCTGT 58.138 34.615 0.00 0.00 35.10 3.41
833 874 3.681594 GCCGATGAGTTGGGTTCAATCTA 60.682 47.826 0.00 0.00 35.10 1.98
840 881 0.606401 CACAGCCGATGAGTTGGGTT 60.606 55.000 0.00 0.00 37.52 4.11
841 882 1.003355 CACAGCCGATGAGTTGGGT 60.003 57.895 0.00 0.00 40.32 4.51
844 885 1.642037 CTGCCACAGCCGATGAGTTG 61.642 60.000 0.00 0.00 38.69 3.16
854 898 0.248289 ATCATTTTGCCTGCCACAGC 59.752 50.000 0.00 0.00 40.48 4.40
856 900 1.002201 CCAATCATTTTGCCTGCCACA 59.998 47.619 0.00 0.00 0.00 4.17
876 920 3.384668 GCAAGAAAGAAAGCAGGGAAAC 58.615 45.455 0.00 0.00 0.00 2.78
882 926 2.865276 GCTTGGGCAAGAAAGAAAGCAG 60.865 50.000 0.00 0.00 40.79 4.24
884 928 1.069049 TGCTTGGGCAAGAAAGAAAGC 59.931 47.619 0.00 0.00 46.36 3.51
955 1003 9.142515 TGAATGCAAAGAAATGCTAATTAACAG 57.857 29.630 0.00 0.00 46.54 3.16
957 1005 9.357652 TCTGAATGCAAAGAAATGCTAATTAAC 57.642 29.630 0.00 0.00 46.54 2.01
960 1008 9.095065 GAATCTGAATGCAAAGAAATGCTAATT 57.905 29.630 0.00 0.00 46.54 1.40
962 1010 7.604549 TGAATCTGAATGCAAAGAAATGCTAA 58.395 30.769 0.00 0.00 46.54 3.09
963 1011 7.160547 TGAATCTGAATGCAAAGAAATGCTA 57.839 32.000 0.00 0.00 46.54 3.49
964 1012 6.032956 TGAATCTGAATGCAAAGAAATGCT 57.967 33.333 0.00 0.00 46.54 3.79
965 1013 5.220416 GCTGAATCTGAATGCAAAGAAATGC 60.220 40.000 0.00 0.00 46.58 3.56
966 1014 5.867174 TGCTGAATCTGAATGCAAAGAAATG 59.133 36.000 0.00 0.00 0.00 2.32
967 1015 5.867716 GTGCTGAATCTGAATGCAAAGAAAT 59.132 36.000 0.00 0.00 35.34 2.17
969 1017 4.614306 CGTGCTGAATCTGAATGCAAAGAA 60.614 41.667 0.00 0.00 35.34 2.52
970 1018 3.120095 CGTGCTGAATCTGAATGCAAAGA 60.120 43.478 0.00 0.00 35.34 2.52
973 1021 2.153645 ACGTGCTGAATCTGAATGCAA 58.846 42.857 0.00 0.00 35.34 4.08
974 1022 1.812235 ACGTGCTGAATCTGAATGCA 58.188 45.000 0.00 0.00 0.00 3.96
975 1023 2.907910 AACGTGCTGAATCTGAATGC 57.092 45.000 0.00 0.00 0.00 3.56
976 1024 4.675190 AGAAACGTGCTGAATCTGAATG 57.325 40.909 0.00 0.00 0.00 2.67
978 1026 4.789481 GCAAAGAAACGTGCTGAATCTGAA 60.789 41.667 0.00 0.00 37.78 3.02
981 1029 2.618241 TGCAAAGAAACGTGCTGAATCT 59.382 40.909 0.00 0.00 41.48 2.40
982 1030 2.998772 TGCAAAGAAACGTGCTGAATC 58.001 42.857 0.00 0.00 41.48 2.52
983 1031 3.648339 ATGCAAAGAAACGTGCTGAAT 57.352 38.095 0.00 0.00 41.48 2.57
984 1032 4.764679 ATATGCAAAGAAACGTGCTGAA 57.235 36.364 0.00 0.00 41.48 3.02
985 1033 6.292114 CGTATATATGCAAAGAAACGTGCTGA 60.292 38.462 0.00 0.00 41.48 4.26
986 1034 5.840781 CGTATATATGCAAAGAAACGTGCTG 59.159 40.000 0.00 0.00 41.48 4.41
987 1035 5.522460 ACGTATATATGCAAAGAAACGTGCT 59.478 36.000 15.94 0.00 40.43 4.40
988 1036 5.734311 ACGTATATATGCAAAGAAACGTGC 58.266 37.500 15.94 0.00 40.43 5.34
989 1037 7.833539 TGTACGTATATATGCAAAGAAACGTG 58.166 34.615 22.22 0.12 41.79 4.49
990 1038 7.990541 TGTACGTATATATGCAAAGAAACGT 57.009 32.000 19.14 19.14 43.78 3.99
991 1039 8.484799 ACATGTACGTATATATGCAAAGAAACG 58.515 33.333 4.36 11.25 34.18 3.60
995 1043 9.414295 GGTAACATGTACGTATATATGCAAAGA 57.586 33.333 4.36 0.00 34.18 2.52
996 1044 8.370321 CGGTAACATGTACGTATATATGCAAAG 58.630 37.037 4.36 0.00 34.18 2.77
997 1045 8.081025 TCGGTAACATGTACGTATATATGCAAA 58.919 33.333 4.36 0.00 34.18 3.68
998 1046 7.592051 TCGGTAACATGTACGTATATATGCAA 58.408 34.615 4.36 0.00 34.18 4.08
999 1047 7.143514 TCGGTAACATGTACGTATATATGCA 57.856 36.000 4.36 0.00 34.18 3.96
1000 1048 8.624701 ATTCGGTAACATGTACGTATATATGC 57.375 34.615 4.36 1.48 34.18 3.14
1005 1053 9.449550 CAACTTATTCGGTAACATGTACGTATA 57.550 33.333 14.49 12.38 0.00 1.47
1006 1054 7.436080 CCAACTTATTCGGTAACATGTACGTAT 59.564 37.037 14.49 13.14 0.00 3.06
1007 1055 6.751425 CCAACTTATTCGGTAACATGTACGTA 59.249 38.462 14.49 7.93 0.00 3.57
1008 1056 5.577945 CCAACTTATTCGGTAACATGTACGT 59.422 40.000 14.49 0.00 0.00 3.57
1009 1057 5.577945 ACCAACTTATTCGGTAACATGTACG 59.422 40.000 0.00 4.90 0.00 3.67
1010 1058 6.973229 ACCAACTTATTCGGTAACATGTAC 57.027 37.500 0.00 0.00 0.00 2.90
1011 1059 7.160049 TGAACCAACTTATTCGGTAACATGTA 58.840 34.615 0.00 0.00 31.12 2.29
1012 1060 5.998981 TGAACCAACTTATTCGGTAACATGT 59.001 36.000 0.00 0.00 31.12 3.21
1013 1061 6.370442 TCTGAACCAACTTATTCGGTAACATG 59.630 38.462 0.00 0.00 33.64 3.21
1014 1062 6.469410 TCTGAACCAACTTATTCGGTAACAT 58.531 36.000 0.00 0.00 33.64 2.71
1015 1063 5.856156 TCTGAACCAACTTATTCGGTAACA 58.144 37.500 0.00 0.00 33.64 2.41
1016 1064 6.980051 ATCTGAACCAACTTATTCGGTAAC 57.020 37.500 0.00 0.00 33.64 2.50
1017 1065 7.162761 TGAATCTGAACCAACTTATTCGGTAA 58.837 34.615 0.00 0.00 33.64 2.85
1018 1066 6.703319 TGAATCTGAACCAACTTATTCGGTA 58.297 36.000 0.00 0.00 33.64 4.02
1019 1067 5.556915 TGAATCTGAACCAACTTATTCGGT 58.443 37.500 0.00 0.00 33.64 4.69
1020 1068 5.447818 GCTGAATCTGAACCAACTTATTCGG 60.448 44.000 0.00 0.00 34.37 4.30
1021 1069 5.122239 TGCTGAATCTGAACCAACTTATTCG 59.878 40.000 0.00 0.00 0.00 3.34
1022 1070 6.317857 GTGCTGAATCTGAACCAACTTATTC 58.682 40.000 0.00 0.00 0.00 1.75
1067 1115 8.213679 AGCAGAGCCTGAATAATGAACTAATAA 58.786 33.333 6.40 0.00 32.44 1.40
1068 1116 7.739825 AGCAGAGCCTGAATAATGAACTAATA 58.260 34.615 6.40 0.00 32.44 0.98
1069 1117 6.599445 AGCAGAGCCTGAATAATGAACTAAT 58.401 36.000 6.40 0.00 32.44 1.73
1115 1169 9.480053 CAGGCCACATCATTAAATTAAATTAGG 57.520 33.333 5.01 0.00 0.00 2.69
1118 1172 6.767423 GGCAGGCCACATCATTAAATTAAATT 59.233 34.615 5.01 0.00 35.81 1.82
1119 1173 6.100134 AGGCAGGCCACATCATTAAATTAAAT 59.900 34.615 13.63 0.00 38.92 1.40
1120 1174 5.424895 AGGCAGGCCACATCATTAAATTAAA 59.575 36.000 13.63 0.00 38.92 1.52
1123 1177 3.133362 CAGGCAGGCCACATCATTAAATT 59.867 43.478 13.63 0.00 38.92 1.82
1124 1178 2.696707 CAGGCAGGCCACATCATTAAAT 59.303 45.455 13.63 0.00 38.92 1.40
1125 1179 2.101783 CAGGCAGGCCACATCATTAAA 58.898 47.619 13.63 0.00 38.92 1.52
1126 1180 1.005805 ACAGGCAGGCCACATCATTAA 59.994 47.619 13.63 0.00 38.92 1.40
1127 1181 0.625316 ACAGGCAGGCCACATCATTA 59.375 50.000 13.63 0.00 38.92 1.90
1128 1182 0.625316 TACAGGCAGGCCACATCATT 59.375 50.000 13.63 0.00 38.92 2.57
1129 1183 0.182061 CTACAGGCAGGCCACATCAT 59.818 55.000 13.63 0.00 38.92 2.45
1130 1184 1.200760 ACTACAGGCAGGCCACATCA 61.201 55.000 13.63 0.00 38.92 3.07
1131 1185 0.745845 CACTACAGGCAGGCCACATC 60.746 60.000 13.63 0.00 38.92 3.06
1132 1186 1.300963 CACTACAGGCAGGCCACAT 59.699 57.895 13.63 0.00 38.92 3.21
1133 1187 2.111999 GACACTACAGGCAGGCCACA 62.112 60.000 13.63 0.00 38.92 4.17
1134 1188 1.376037 GACACTACAGGCAGGCCAC 60.376 63.158 13.63 0.00 38.92 5.01
1135 1189 1.200760 ATGACACTACAGGCAGGCCA 61.201 55.000 13.63 0.00 38.92 5.36
1136 1190 0.035056 AATGACACTACAGGCAGGCC 60.035 55.000 0.97 0.97 0.00 5.19
1137 1191 1.826385 AAATGACACTACAGGCAGGC 58.174 50.000 0.00 0.00 0.00 4.85
1138 1192 4.074970 AGAAAAATGACACTACAGGCAGG 58.925 43.478 0.00 0.00 0.00 4.85
1139 1193 5.695851 AAGAAAAATGACACTACAGGCAG 57.304 39.130 0.00 0.00 0.00 4.85
1140 1194 5.827797 AGAAAGAAAAATGACACTACAGGCA 59.172 36.000 0.00 0.00 0.00 4.75
1141 1195 6.319141 AGAAAGAAAAATGACACTACAGGC 57.681 37.500 0.00 0.00 0.00 4.85
1166 1220 7.418025 GCACCTTACCTGTCTCTAGATTGTTAT 60.418 40.741 0.00 0.00 0.00 1.89
1167 1221 6.127423 GCACCTTACCTGTCTCTAGATTGTTA 60.127 42.308 0.00 0.00 0.00 2.41
1168 1222 5.337652 GCACCTTACCTGTCTCTAGATTGTT 60.338 44.000 0.00 0.00 0.00 2.83
1169 1223 4.160626 GCACCTTACCTGTCTCTAGATTGT 59.839 45.833 0.00 0.00 0.00 2.71
1240 1294 3.709141 ACAGGGCCACAAAACTTAATTGT 59.291 39.130 6.18 0.00 41.50 2.71
1241 1295 4.057432 CACAGGGCCACAAAACTTAATTG 58.943 43.478 6.18 0.00 0.00 2.32
1242 1296 3.964031 TCACAGGGCCACAAAACTTAATT 59.036 39.130 6.18 0.00 0.00 1.40
1246 1300 1.480545 GTTCACAGGGCCACAAAACTT 59.519 47.619 6.18 0.00 0.00 2.66
1250 1304 1.456705 GGGTTCACAGGGCCACAAA 60.457 57.895 6.18 0.00 0.00 2.83
1251 1305 2.197324 GGGTTCACAGGGCCACAA 59.803 61.111 6.18 0.00 0.00 3.33
1252 1306 2.694920 TTGGGTTCACAGGGCCACA 61.695 57.895 6.18 0.00 0.00 4.17
1253 1307 2.197324 TTGGGTTCACAGGGCCAC 59.803 61.111 6.18 0.00 0.00 5.01
1289 1524 9.933723 AAGAAAGTAGGGAAATCAATCATTTTG 57.066 29.630 0.00 0.00 34.60 2.44
1396 1681 4.576330 AAGGGCAAGCAGAATTACTACT 57.424 40.909 0.00 0.00 0.00 2.57
1403 1688 2.692041 GCTGAATAAGGGCAAGCAGAAT 59.308 45.455 0.00 0.00 0.00 2.40
1404 1689 2.094675 GCTGAATAAGGGCAAGCAGAA 58.905 47.619 0.00 0.00 0.00 3.02
1406 1691 0.743097 GGCTGAATAAGGGCAAGCAG 59.257 55.000 0.00 0.00 0.00 4.24
1407 1692 0.332632 AGGCTGAATAAGGGCAAGCA 59.667 50.000 0.00 0.00 0.00 3.91
1410 1695 2.586425 GCATAGGCTGAATAAGGGCAA 58.414 47.619 0.00 0.00 36.96 4.52
1453 1881 1.153369 CTACAGGTGGGCCACATCG 60.153 63.158 35.69 24.66 35.86 3.84
1496 1939 5.720371 AGCTAGCACCTAATATGTCTCTG 57.280 43.478 18.83 0.00 0.00 3.35
1546 2520 5.170625 CCAAAACTTAATCGTGTGTTGTTCG 59.829 40.000 0.00 0.00 31.43 3.95
1558 2532 6.739112 AGCACTTTCTGTCCAAAACTTAATC 58.261 36.000 0.00 0.00 0.00 1.75
1596 3142 6.147821 ACACTCATTACGAAGAATTCCAACTG 59.852 38.462 0.65 0.00 43.81 3.16
1635 3184 5.619132 TGCATGTGAAGATAGATGGAGAA 57.381 39.130 0.00 0.00 0.00 2.87
1674 3238 8.484214 AGCTGGACTCAAACTTCTATGATATA 57.516 34.615 0.00 0.00 0.00 0.86
1675 3239 7.372260 AGCTGGACTCAAACTTCTATGATAT 57.628 36.000 0.00 0.00 0.00 1.63
1676 3240 6.798427 AGCTGGACTCAAACTTCTATGATA 57.202 37.500 0.00 0.00 0.00 2.15
1677 3241 5.669477 GAGCTGGACTCAAACTTCTATGAT 58.331 41.667 0.00 0.00 45.49 2.45
1678 3242 5.078411 GAGCTGGACTCAAACTTCTATGA 57.922 43.478 0.00 0.00 45.49 2.15
1820 3404 4.753233 AGAGAATTGAGATCACTTGTCCG 58.247 43.478 6.49 0.00 31.93 4.79
1855 3439 5.452636 CCCCTCTATCTTGTAGAGTTGCTTC 60.453 48.000 10.27 0.00 39.42 3.86
1861 3445 6.031964 TGATTCCCCTCTATCTTGTAGAGT 57.968 41.667 10.27 0.00 39.42 3.24
1960 3546 3.608073 CGATTTCCACTTTCCGCAAATTC 59.392 43.478 0.00 0.00 0.00 2.17
2140 3726 0.972883 GGAGTTCAGCCTGAGACACT 59.027 55.000 0.00 0.00 0.00 3.55
2165 3753 6.558771 AAAAGCCCAATCAAAGTTATTTGC 57.441 33.333 0.00 0.00 44.56 3.68
2176 3764 2.286365 ACCGAGAAAAAGCCCAATCA 57.714 45.000 0.00 0.00 0.00 2.57
2185 3773 2.096248 ACCAACTGCAACCGAGAAAAA 58.904 42.857 0.00 0.00 0.00 1.94
2481 4078 7.060421 ACCTTAAATCCTTCAAACTCTCACAA 58.940 34.615 0.00 0.00 0.00 3.33
2576 4173 3.236816 CAAACATACTCAAGGCAAAGCG 58.763 45.455 0.00 0.00 0.00 4.68
2641 4239 7.373493 CCAAAGTGAGATGCTTTTAAGATTGT 58.627 34.615 0.00 0.00 34.32 2.71
2645 4243 5.072741 AGCCAAAGTGAGATGCTTTTAAGA 58.927 37.500 0.00 0.00 34.32 2.10
2884 4485 5.242838 TCATCAAAGAAGTTGGCGGTATTTT 59.757 36.000 0.00 0.00 37.85 1.82
2972 4573 2.173669 CCCAGCATCAGTTACCGCG 61.174 63.158 0.00 0.00 0.00 6.46
3190 4791 3.193782 AGGCCAATTCTCTTCCTAAGGT 58.806 45.455 5.01 0.00 0.00 3.50
3209 4810 3.003689 CACTTCAATAATAGCCGCCAAGG 59.996 47.826 0.00 0.00 44.97 3.61
3223 4827 7.123355 TGAAAATTTTGGAGACCACTTCAAT 57.877 32.000 8.47 0.00 40.76 2.57
3224 4828 6.154363 ACTGAAAATTTTGGAGACCACTTCAA 59.846 34.615 8.47 0.00 39.57 2.69
3282 4887 1.135603 CCTTGTCCAATGATGCACACG 60.136 52.381 0.00 0.00 0.00 4.49
3304 4934 1.136891 CTAGGTCGGATGATGCACACA 59.863 52.381 0.00 0.00 0.00 3.72
3305 4935 1.409064 TCTAGGTCGGATGATGCACAC 59.591 52.381 0.00 0.00 0.00 3.82
3501 5170 3.878699 ACTTATGTCGGTTTCAAAACGGT 59.121 39.130 7.93 0.00 39.77 4.83
3549 5224 2.887783 ACTCTCATATAGTGCCTCCACG 59.112 50.000 0.00 0.00 46.62 4.94
3656 5345 1.819928 TTGCCACACGAACATAGCAT 58.180 45.000 0.00 0.00 0.00 3.79
3728 5424 1.922135 AAGCATGCCGCCTTTGTACG 61.922 55.000 15.66 0.00 44.04 3.67
3808 5568 9.473007 TTGGAATCTAAACATCCACATTTATGA 57.527 29.630 0.00 0.00 42.71 2.15
3912 5687 3.755378 GTCCAGAGCAAAGACATGATGTT 59.245 43.478 0.00 0.00 0.00 2.71
3960 5737 3.052793 TGTGACCCCCTCAAAAAGGTAAA 60.053 43.478 0.00 0.00 44.56 2.01
3990 5767 5.509498 ACCAAGCAAACACATGATAGGTAT 58.491 37.500 0.00 0.00 0.00 2.73
4080 5871 1.151668 GAGCTGAACTGATGCAACGT 58.848 50.000 0.00 0.00 0.00 3.99
4143 5934 6.830324 AGAGGGAGTACAACACATATTACGTA 59.170 38.462 0.00 0.00 0.00 3.57
4144 5935 5.655532 AGAGGGAGTACAACACATATTACGT 59.344 40.000 0.00 0.00 0.00 3.57
4145 5936 5.977725 CAGAGGGAGTACAACACATATTACG 59.022 44.000 0.00 0.00 0.00 3.18
4146 5937 6.875076 ACAGAGGGAGTACAACACATATTAC 58.125 40.000 0.00 0.00 0.00 1.89
4147 5938 6.097839 GGACAGAGGGAGTACAACACATATTA 59.902 42.308 0.00 0.00 0.00 0.98
4148 5939 5.104900 GGACAGAGGGAGTACAACACATATT 60.105 44.000 0.00 0.00 0.00 1.28
4149 5940 4.406003 GGACAGAGGGAGTACAACACATAT 59.594 45.833 0.00 0.00 0.00 1.78
4150 5941 3.767673 GGACAGAGGGAGTACAACACATA 59.232 47.826 0.00 0.00 0.00 2.29
4151 5942 2.567615 GGACAGAGGGAGTACAACACAT 59.432 50.000 0.00 0.00 0.00 3.21
4152 5943 1.968493 GGACAGAGGGAGTACAACACA 59.032 52.381 0.00 0.00 0.00 3.72
4153 5944 1.275573 GGGACAGAGGGAGTACAACAC 59.724 57.143 0.00 0.00 0.00 3.32
4154 5945 1.132977 TGGGACAGAGGGAGTACAACA 60.133 52.381 0.00 0.00 0.00 3.33
4155 5946 1.640917 TGGGACAGAGGGAGTACAAC 58.359 55.000 0.00 0.00 0.00 3.32
4180 5971 8.852380 GCTAAAACAGTTTGAAAAACGTTCTTA 58.148 29.630 0.00 10.50 0.00 2.10
4181 5972 7.597369 AGCTAAAACAGTTTGAAAAACGTTCTT 59.403 29.630 0.00 0.00 0.00 2.52
4182 5973 7.088272 AGCTAAAACAGTTTGAAAAACGTTCT 58.912 30.769 0.00 0.00 0.00 3.01
4183 5974 7.273188 AGCTAAAACAGTTTGAAAAACGTTC 57.727 32.000 0.00 0.00 0.00 3.95
4184 5975 7.646446 AAGCTAAAACAGTTTGAAAAACGTT 57.354 28.000 0.00 0.00 0.00 3.99
4185 5976 8.745464 TTAAGCTAAAACAGTTTGAAAAACGT 57.255 26.923 0.00 0.00 0.00 3.99
4191 5982 9.699703 ACACTTTTTAAGCTAAAACAGTTTGAA 57.300 25.926 0.00 0.00 37.38 2.69
4192 5983 9.699703 AACACTTTTTAAGCTAAAACAGTTTGA 57.300 25.926 0.00 0.00 37.38 2.69
4193 5984 9.952341 GAACACTTTTTAAGCTAAAACAGTTTG 57.048 29.630 0.00 0.00 37.38 2.93
4194 5985 9.923143 AGAACACTTTTTAAGCTAAAACAGTTT 57.077 25.926 0.00 0.00 37.38 2.66
4195 5986 9.923143 AAGAACACTTTTTAAGCTAAAACAGTT 57.077 25.926 0.00 0.00 37.38 3.16
4209 6000 8.899771 CCGTCCCATAATATAAGAACACTTTTT 58.100 33.333 0.00 0.00 0.00 1.94
4210 6001 8.269317 TCCGTCCCATAATATAAGAACACTTTT 58.731 33.333 0.00 0.00 0.00 2.27
4211 6002 7.798071 TCCGTCCCATAATATAAGAACACTTT 58.202 34.615 0.00 0.00 0.00 2.66
4212 6003 7.369551 TCCGTCCCATAATATAAGAACACTT 57.630 36.000 0.00 0.00 0.00 3.16
4213 6004 6.014499 CCTCCGTCCCATAATATAAGAACACT 60.014 42.308 0.00 0.00 0.00 3.55
4214 6005 6.164176 CCTCCGTCCCATAATATAAGAACAC 58.836 44.000 0.00 0.00 0.00 3.32
4215 6006 5.247564 CCCTCCGTCCCATAATATAAGAACA 59.752 44.000 0.00 0.00 0.00 3.18
4216 6007 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
4217 6008 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
4218 6009 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4219 6010 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4220 6011 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4221 6012 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4222 6013 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4223 6014 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
4224 6015 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
4225 6016 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4226 6017 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4227 6018 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
4228 6019 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
4229 6020 2.149973 TAAAGTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.