Multiple sequence alignment - TraesCS1B01G008800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G008800 chr1B 100.000 4400 0 0 1 4400 4535896 4531497 0.000000e+00 8126.0
1 TraesCS1B01G008800 chr1B 92.900 1648 114 3 1620 3266 4824048 4822403 0.000000e+00 2392.0
2 TraesCS1B01G008800 chr1B 83.343 1759 274 16 1520 3268 4114967 4116716 0.000000e+00 1607.0
3 TraesCS1B01G008800 chr1B 83.371 1750 274 17 1526 3266 4483232 4481491 0.000000e+00 1604.0
4 TraesCS1B01G008800 chr1B 82.991 1752 288 10 1520 3266 3951584 3953330 0.000000e+00 1576.0
5 TraesCS1B01G008800 chr1B 82.802 1756 288 13 1520 3268 3964990 3966738 0.000000e+00 1557.0
6 TraesCS1B01G008800 chr1B 92.586 1106 41 13 544 1627 4825514 4824428 0.000000e+00 1550.0
7 TraesCS1B01G008800 chr1B 94.069 607 21 3 3267 3867 665210572 665209975 0.000000e+00 907.0
8 TraesCS1B01G008800 chr1B 94.050 605 21 3 3267 3865 665164959 665164364 0.000000e+00 904.0
9 TraesCS1B01G008800 chr1B 94.030 603 20 3 3267 3862 665183653 665183060 0.000000e+00 900.0
10 TraesCS1B01G008800 chr1B 92.659 613 22 6 3267 3865 665148844 665148241 0.000000e+00 861.0
11 TraesCS1B01G008800 chr1B 88.091 529 47 8 3886 4400 665209994 665209468 8.090000e-172 614.0
12 TraesCS1B01G008800 chr1B 87.856 527 48 8 3888 4400 665164381 665163857 4.870000e-169 604.0
13 TraesCS1B01G008800 chr1B 87.810 525 48 8 3890 4400 665183074 665182552 6.300000e-168 601.0
14 TraesCS1B01G008800 chr1B 87.666 527 48 9 3888 4400 665148258 665147735 8.150000e-167 597.0
15 TraesCS1B01G008800 chr1B 82.895 684 95 12 878 1543 4856537 4855858 2.930000e-166 595.0
16 TraesCS1B01G008800 chr1B 84.076 628 82 12 909 1533 4510931 4510319 1.360000e-164 590.0
17 TraesCS1B01G008800 chr1B 84.551 602 84 5 937 1534 3942304 3942900 4.900000e-164 588.0
18 TraesCS1B01G008800 chr1B 85.610 549 69 6 990 1533 4150747 4151290 6.390000e-158 568.0
19 TraesCS1B01G008800 chr1B 84.902 563 80 3 975 1533 3964514 3965075 8.260000e-157 564.0
20 TraesCS1B01G008800 chr1B 84.375 576 79 7 2 567 4511761 4511187 4.970000e-154 555.0
21 TraesCS1B01G008800 chr1B 92.793 333 20 3 80 408 4825844 4825512 3.080000e-131 479.0
22 TraesCS1B01G008800 chr1B 94.309 246 12 2 4157 4400 655345738 655345493 4.150000e-100 375.0
23 TraesCS1B01G008800 chr1B 76.923 611 93 30 3294 3881 655347671 655347086 1.990000e-78 303.0
24 TraesCS1B01G008800 chr1B 83.083 266 32 7 558 818 4911484 4911227 3.420000e-56 230.0
25 TraesCS1B01G008800 chr1B 80.827 266 35 10 558 818 4148530 4148784 1.250000e-45 195.0
26 TraesCS1B01G008800 chr1B 86.628 172 14 3 739 902 3940741 3940911 9.720000e-42 182.0
27 TraesCS1B01G008800 chr1B 84.706 85 13 0 709 793 4858859 4858775 7.840000e-13 86.1
28 TraesCS1B01G008800 chr1B 85.246 61 5 1 167 223 4512909 4512849 4.750000e-05 60.2
29 TraesCS1B01G008800 chr1D 91.731 1560 110 6 1 1543 391344 392901 0.000000e+00 2148.0
30 TraesCS1B01G008800 chr1D 83.533 1749 272 16 1526 3266 620702 618962 0.000000e+00 1620.0
31 TraesCS1B01G008800 chr1D 82.723 1175 199 4 2094 3266 648569 649741 0.000000e+00 1042.0
32 TraesCS1B01G008800 chr1D 80.443 1355 247 17 1923 3268 448018 449363 0.000000e+00 1018.0
33 TraesCS1B01G008800 chr1D 80.480 1332 228 28 1952 3265 460038 461355 0.000000e+00 990.0
34 TraesCS1B01G008800 chr1D 81.834 1178 204 10 2094 3266 393236 394408 0.000000e+00 981.0
35 TraesCS1B01G008800 chr1D 85.639 947 120 14 2328 3266 494548130 494549068 0.000000e+00 981.0
36 TraesCS1B01G008800 chr1D 84.665 939 140 4 2328 3264 696760 695824 0.000000e+00 933.0
37 TraesCS1B01G008800 chr1D 82.743 678 100 12 863 1533 647269 647936 4.900000e-164 588.0
38 TraesCS1B01G008800 chr1D 82.459 667 86 15 859 1498 494546782 494547444 4.970000e-154 555.0
39 TraesCS1B01G008800 chr1D 81.541 688 107 15 862 1533 458576 459259 2.310000e-152 549.0
40 TraesCS1B01G008800 chr1D 86.573 499 63 2 1036 1533 722877 722382 8.320000e-152 547.0
41 TraesCS1B01G008800 chr1D 80.669 688 111 13 874 1543 621296 620613 8.440000e-142 514.0
42 TraesCS1B01G008800 chr1D 83.794 543 76 6 1001 1543 447108 447638 5.080000e-139 505.0
43 TraesCS1B01G008800 chr1D 83.333 252 34 5 2 248 646565 646813 4.430000e-55 226.0
44 TraesCS1B01G008800 chr1D 93.617 47 2 1 522 567 723388 723342 7.900000e-08 69.4
45 TraesCS1B01G008800 chr1D 100.000 33 0 0 758 790 390211 390243 1.320000e-05 62.1
46 TraesCS1B01G008800 chr3D 82.991 1752 273 20 1526 3266 560057674 560055937 0.000000e+00 1561.0
47 TraesCS1B01G008800 chr3D 82.229 996 128 34 3375 4341 568138441 568139416 0.000000e+00 813.0
48 TraesCS1B01G008800 chr3D 87.795 254 25 4 4148 4400 568139149 568139397 4.300000e-75 292.0
49 TraesCS1B01G008800 chr1A 82.971 1750 269 22 1530 3266 3491366 3489633 0.000000e+00 1554.0
50 TraesCS1B01G008800 chr1A 81.823 1755 303 16 1520 3266 3672061 3670315 0.000000e+00 1459.0
51 TraesCS1B01G008800 chr1A 83.099 1349 218 9 1923 3266 3453883 3452540 0.000000e+00 1219.0
52 TraesCS1B01G008800 chr1A 83.376 1179 185 9 2094 3266 27213136 27214309 0.000000e+00 1081.0
53 TraesCS1B01G008800 chr1A 82.498 1177 198 7 2094 3266 3656210 3655038 0.000000e+00 1026.0
54 TraesCS1B01G008800 chr1A 83.992 1012 153 7 2259 3266 3581264 3580258 0.000000e+00 963.0
55 TraesCS1B01G008800 chr1A 83.834 699 82 15 862 1533 3657537 3656843 1.730000e-178 636.0
56 TraesCS1B01G008800 chr1A 83.441 622 96 3 925 1543 3582598 3581981 4.940000e-159 571.0
57 TraesCS1B01G008800 chr1A 85.507 552 72 4 987 1533 3503897 3503349 1.780000e-158 569.0
58 TraesCS1B01G008800 chr1A 79.502 844 129 28 709 1533 2982343 2983161 1.070000e-155 560.0
59 TraesCS1B01G008800 chr1A 79.870 154 17 7 731 872 3016977 3017128 2.800000e-17 100.0
60 TraesCS1B01G008800 chr1A 83.871 93 10 3 142 230 3762785 3762694 2.820000e-12 84.2
61 TraesCS1B01G008800 chr1A 94.595 37 1 1 758 793 3695245 3695209 6.150000e-04 56.5
62 TraesCS1B01G008800 chrUn 94.380 605 19 3 3267 3865 220114591 220113996 0.000000e+00 915.0
63 TraesCS1B01G008800 chrUn 82.063 853 84 25 3375 4206 79714262 79715066 0.000000e+00 664.0
64 TraesCS1B01G008800 chrUn 82.285 779 80 22 3375 4143 297254277 297253547 4.830000e-174 621.0
65 TraesCS1B01G008800 chrUn 85.417 480 51 11 3888 4351 220114013 220113537 8.560000e-132 481.0
66 TraesCS1B01G008800 chrUn 92.409 303 11 3 4110 4400 389343554 389343252 5.260000e-114 422.0
67 TraesCS1B01G008800 chrUn 88.627 255 26 3 4148 4400 220113818 220113565 1.540000e-79 307.0
68 TraesCS1B01G008800 chr6B 94.491 599 18 4 3267 3859 716378211 716377622 0.000000e+00 909.0
69 TraesCS1B01G008800 chr6B 87.908 521 47 8 3894 4400 716377633 716377115 2.260000e-167 599.0
70 TraesCS1B01G008800 chr5A 94.079 608 20 3 3267 3867 629317258 629316660 0.000000e+00 909.0
71 TraesCS1B01G008800 chr5A 93.854 602 22 3 3267 3862 629336165 629335573 0.000000e+00 893.0
72 TraesCS1B01G008800 chr5A 87.152 467 45 7 3886 4339 629316679 629316215 2.350000e-142 516.0
73 TraesCS1B01G008800 chr5A 86.667 465 47 7 3890 4341 629335587 629335125 6.570000e-138 501.0
74 TraesCS1B01G008800 chr2B 94.215 605 19 3 3265 3862 781085893 781086488 0.000000e+00 909.0
75 TraesCS1B01G008800 chr7B 79.965 1138 140 48 3299 4400 731010182 731009097 0.000000e+00 758.0
76 TraesCS1B01G008800 chr7B 79.719 1139 140 50 3299 4400 730998927 730997843 0.000000e+00 739.0
77 TraesCS1B01G008800 chr2A 79.259 1080 152 42 3296 4346 377021276 377022312 0.000000e+00 688.0
78 TraesCS1B01G008800 chr3A 88.180 533 46 9 3882 4400 501924257 501924786 1.740000e-173 619.0
79 TraesCS1B01G008800 chr3A 87.856 527 47 9 3888 4400 501908850 501909373 1.750000e-168 603.0
80 TraesCS1B01G008800 chr7A 81.337 718 83 30 3634 4337 734751188 734751868 1.800000e-148 536.0
81 TraesCS1B01G008800 chr4A 80.000 475 77 14 3375 3847 11375244 11374786 7.050000e-88 335.0
82 TraesCS1B01G008800 chr2D 79.394 495 72 21 3375 3862 642358292 642358763 5.490000e-84 322.0
83 TraesCS1B01G008800 chr6A 78.316 392 65 15 3375 3765 11876063 11875691 7.360000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G008800 chr1B 4531497 4535896 4399 True 8126.000000 8126 100.000000 1 4400 1 chr1B.!!$R2 4399
1 TraesCS1B01G008800 chr1B 4114967 4116716 1749 False 1607.000000 1607 83.343000 1520 3268 1 chr1B.!!$F2 1748
2 TraesCS1B01G008800 chr1B 4481491 4483232 1741 True 1604.000000 1604 83.371000 1526 3266 1 chr1B.!!$R1 1740
3 TraesCS1B01G008800 chr1B 3951584 3953330 1746 False 1576.000000 1576 82.991000 1520 3266 1 chr1B.!!$F1 1746
4 TraesCS1B01G008800 chr1B 4822403 4825844 3441 True 1473.666667 2392 92.759667 80 3266 3 chr1B.!!$R5 3186
5 TraesCS1B01G008800 chr1B 3964514 3966738 2224 False 1060.500000 1557 83.852000 975 3268 2 chr1B.!!$F4 2293
6 TraesCS1B01G008800 chr1B 665209468 665210572 1104 True 760.500000 907 91.080000 3267 4400 2 chr1B.!!$R11 1133
7 TraesCS1B01G008800 chr1B 665163857 665164959 1102 True 754.000000 904 90.953000 3267 4400 2 chr1B.!!$R9 1133
8 TraesCS1B01G008800 chr1B 665182552 665183653 1101 True 750.500000 900 90.920000 3267 4400 2 chr1B.!!$R10 1133
9 TraesCS1B01G008800 chr1B 665147735 665148844 1109 True 729.000000 861 90.162500 3267 4400 2 chr1B.!!$R8 1133
10 TraesCS1B01G008800 chr1B 4510319 4512909 2590 True 401.733333 590 84.565667 2 1533 3 chr1B.!!$R4 1531
11 TraesCS1B01G008800 chr1B 3940741 3942900 2159 False 385.000000 588 85.589500 739 1534 2 chr1B.!!$F3 795
12 TraesCS1B01G008800 chr1B 4148530 4151290 2760 False 381.500000 568 83.218500 558 1533 2 chr1B.!!$F5 975
13 TraesCS1B01G008800 chr1B 4855858 4858859 3001 True 340.550000 595 83.800500 709 1543 2 chr1B.!!$R6 834
14 TraesCS1B01G008800 chr1B 655345493 655347671 2178 True 339.000000 375 85.616000 3294 4400 2 chr1B.!!$R7 1106
15 TraesCS1B01G008800 chr1D 618962 621296 2334 True 1067.000000 1620 82.101000 874 3266 2 chr1D.!!$R2 2392
16 TraesCS1B01G008800 chr1D 390211 394408 4197 False 1063.700000 2148 91.188333 1 3266 3 chr1D.!!$F1 3265
17 TraesCS1B01G008800 chr1D 695824 696760 936 True 933.000000 933 84.665000 2328 3264 1 chr1D.!!$R1 936
18 TraesCS1B01G008800 chr1D 458576 461355 2779 False 769.500000 990 81.010500 862 3265 2 chr1D.!!$F3 2403
19 TraesCS1B01G008800 chr1D 494546782 494549068 2286 False 768.000000 981 84.049000 859 3266 2 chr1D.!!$F5 2407
20 TraesCS1B01G008800 chr1D 447108 449363 2255 False 761.500000 1018 82.118500 1001 3268 2 chr1D.!!$F2 2267
21 TraesCS1B01G008800 chr1D 646565 649741 3176 False 618.666667 1042 82.933000 2 3266 3 chr1D.!!$F4 3264
22 TraesCS1B01G008800 chr1D 722382 723388 1006 True 308.200000 547 90.095000 522 1533 2 chr1D.!!$R3 1011
23 TraesCS1B01G008800 chr3D 560055937 560057674 1737 True 1561.000000 1561 82.991000 1526 3266 1 chr3D.!!$R1 1740
24 TraesCS1B01G008800 chr3D 568138441 568139416 975 False 552.500000 813 85.012000 3375 4400 2 chr3D.!!$F1 1025
25 TraesCS1B01G008800 chr1A 3489633 3491366 1733 True 1554.000000 1554 82.971000 1530 3266 1 chr1A.!!$R2 1736
26 TraesCS1B01G008800 chr1A 3670315 3672061 1746 True 1459.000000 1459 81.823000 1520 3266 1 chr1A.!!$R4 1746
27 TraesCS1B01G008800 chr1A 3452540 3453883 1343 True 1219.000000 1219 83.099000 1923 3266 1 chr1A.!!$R1 1343
28 TraesCS1B01G008800 chr1A 27213136 27214309 1173 False 1081.000000 1081 83.376000 2094 3266 1 chr1A.!!$F3 1172
29 TraesCS1B01G008800 chr1A 3655038 3657537 2499 True 831.000000 1026 83.166000 862 3266 2 chr1A.!!$R8 2404
30 TraesCS1B01G008800 chr1A 3580258 3582598 2340 True 767.000000 963 83.716500 925 3266 2 chr1A.!!$R7 2341
31 TraesCS1B01G008800 chr1A 3503349 3503897 548 True 569.000000 569 85.507000 987 1533 1 chr1A.!!$R3 546
32 TraesCS1B01G008800 chr1A 2982343 2983161 818 False 560.000000 560 79.502000 709 1533 1 chr1A.!!$F1 824
33 TraesCS1B01G008800 chrUn 79714262 79715066 804 False 664.000000 664 82.063000 3375 4206 1 chrUn.!!$F1 831
34 TraesCS1B01G008800 chrUn 297253547 297254277 730 True 621.000000 621 82.285000 3375 4143 1 chrUn.!!$R1 768
35 TraesCS1B01G008800 chrUn 220113537 220114591 1054 True 567.666667 915 89.474667 3267 4400 3 chrUn.!!$R3 1133
36 TraesCS1B01G008800 chr6B 716377115 716378211 1096 True 754.000000 909 91.199500 3267 4400 2 chr6B.!!$R1 1133
37 TraesCS1B01G008800 chr5A 629316215 629317258 1043 True 712.500000 909 90.615500 3267 4339 2 chr5A.!!$R1 1072
38 TraesCS1B01G008800 chr5A 629335125 629336165 1040 True 697.000000 893 90.260500 3267 4341 2 chr5A.!!$R2 1074
39 TraesCS1B01G008800 chr2B 781085893 781086488 595 False 909.000000 909 94.215000 3265 3862 1 chr2B.!!$F1 597
40 TraesCS1B01G008800 chr7B 731009097 731010182 1085 True 758.000000 758 79.965000 3299 4400 1 chr7B.!!$R2 1101
41 TraesCS1B01G008800 chr7B 730997843 730998927 1084 True 739.000000 739 79.719000 3299 4400 1 chr7B.!!$R1 1101
42 TraesCS1B01G008800 chr2A 377021276 377022312 1036 False 688.000000 688 79.259000 3296 4346 1 chr2A.!!$F1 1050
43 TraesCS1B01G008800 chr3A 501924257 501924786 529 False 619.000000 619 88.180000 3882 4400 1 chr3A.!!$F2 518
44 TraesCS1B01G008800 chr3A 501908850 501909373 523 False 603.000000 603 87.856000 3888 4400 1 chr3A.!!$F1 512
45 TraesCS1B01G008800 chr7A 734751188 734751868 680 False 536.000000 536 81.337000 3634 4337 1 chr7A.!!$F1 703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 306 0.104672 TCAAGACTTGGGGTCCAGGA 60.105 55.000 15.13 0.0 45.54 3.86 F
421 424 0.109086 CGGTCATGAGTCGTTGAGCT 60.109 55.000 17.69 0.0 38.03 4.09 F
463 466 0.951558 GCTGAACAGCGAAAAGGGAA 59.048 50.000 10.99 0.0 45.29 3.97 F
466 469 0.951558 GAACAGCGAAAAGGGAAGCA 59.048 50.000 0.00 0.0 0.00 3.91 F
756 763 1.001974 TGTTCTCCACAGGAATGACGG 59.998 52.381 0.00 0.0 0.00 4.79 F
2582 8804 0.515564 ACATGCGCGAGTTTGGTTAC 59.484 50.000 12.10 0.0 0.00 2.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2249 8326 0.328258 CTCTTTGGGGATGGAACCGT 59.672 55.000 0.00 0.00 0.00 4.83 R
2286 8508 2.722094 TGCAACCACAGAGTTTTGAGT 58.278 42.857 0.00 0.00 0.00 3.41 R
2451 8673 4.236527 AGGTCCTGAAAGTGAGTTGTTT 57.763 40.909 0.00 0.00 0.00 2.83 R
2509 8731 6.978338 ACATATTCAATGCAACATGGAGATC 58.022 36.000 0.00 0.00 0.00 2.75 R
2706 8928 2.472029 ACTTGTAGCTGGGTAGATGCT 58.528 47.619 0.00 0.00 40.43 3.79 R
4156 11629 0.106708 TTGGATCGCCATGTAGAGCC 59.893 55.000 13.14 13.14 45.46 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.783708 AACACTGAAACCTTTATTTCACCA 57.216 33.333 0.00 0.00 42.32 4.17
25 26 6.144078 ACACTGAAACCTTTATTTCACCAC 57.856 37.500 0.00 0.00 42.32 4.16
26 27 5.891551 ACACTGAAACCTTTATTTCACCACT 59.108 36.000 0.00 0.00 42.32 4.00
27 28 7.057894 ACACTGAAACCTTTATTTCACCACTA 58.942 34.615 0.00 0.00 42.32 2.74
28 29 7.012989 ACACTGAAACCTTTATTTCACCACTAC 59.987 37.037 0.00 0.00 42.32 2.73
29 30 6.489022 ACTGAAACCTTTATTTCACCACTACC 59.511 38.462 0.00 0.00 42.32 3.18
30 31 5.470777 TGAAACCTTTATTTCACCACTACCG 59.529 40.000 0.00 0.00 42.32 4.02
31 32 3.946606 ACCTTTATTTCACCACTACCGG 58.053 45.455 0.00 0.00 0.00 5.28
32 33 3.328637 ACCTTTATTTCACCACTACCGGT 59.671 43.478 13.98 13.98 41.07 5.28
46 47 5.888982 ACTACCGGTGAATAGAATTCCAT 57.111 39.130 19.93 0.00 0.00 3.41
47 48 5.855045 ACTACCGGTGAATAGAATTCCATC 58.145 41.667 19.93 0.00 0.00 3.51
48 49 4.771114 ACCGGTGAATAGAATTCCATCA 57.229 40.909 6.12 1.65 0.00 3.07
49 50 4.451900 ACCGGTGAATAGAATTCCATCAC 58.548 43.478 6.12 19.77 39.65 3.06
57 58 9.956720 GTGAATAGAATTCCATCACCTAATTTG 57.043 33.333 18.26 0.00 35.51 2.32
58 59 9.699410 TGAATAGAATTCCATCACCTAATTTGT 57.301 29.630 0.65 0.00 0.00 2.83
60 61 6.683974 AGAATTCCATCACCTAATTTGTCG 57.316 37.500 0.65 0.00 0.00 4.35
61 62 6.180472 AGAATTCCATCACCTAATTTGTCGT 58.820 36.000 0.65 0.00 0.00 4.34
62 63 6.659242 AGAATTCCATCACCTAATTTGTCGTT 59.341 34.615 0.65 0.00 0.00 3.85
63 64 5.621197 TTCCATCACCTAATTTGTCGTTG 57.379 39.130 0.00 0.00 0.00 4.10
64 65 4.647611 TCCATCACCTAATTTGTCGTTGT 58.352 39.130 0.00 0.00 0.00 3.32
65 66 4.454161 TCCATCACCTAATTTGTCGTTGTG 59.546 41.667 0.00 0.00 0.00 3.33
66 67 3.889196 TCACCTAATTTGTCGTTGTGC 57.111 42.857 0.00 0.00 0.00 4.57
67 68 3.472652 TCACCTAATTTGTCGTTGTGCT 58.527 40.909 0.00 0.00 0.00 4.40
68 69 3.249799 TCACCTAATTTGTCGTTGTGCTG 59.750 43.478 0.00 0.00 0.00 4.41
69 70 2.031157 ACCTAATTTGTCGTTGTGCTGC 60.031 45.455 0.00 0.00 0.00 5.25
70 71 2.233355 CTAATTTGTCGTTGTGCTGCG 58.767 47.619 0.00 0.00 0.00 5.18
71 72 0.934436 AATTTGTCGTTGTGCTGCGC 60.934 50.000 6.19 6.19 0.00 6.09
72 73 2.057654 ATTTGTCGTTGTGCTGCGCA 62.058 50.000 12.53 12.53 35.60 6.09
73 74 2.258580 TTTGTCGTTGTGCTGCGCAA 62.259 50.000 23.38 23.38 41.47 4.85
77 78 2.353839 GTTGTGCTGCGCAACCAG 60.354 61.111 36.34 0.00 45.56 4.00
94 95 2.210013 AGCCACGAGTCCTTGAGCA 61.210 57.895 0.00 0.00 0.00 4.26
97 98 1.593196 CCACGAGTCCTTGAGCAAAA 58.407 50.000 0.00 0.00 0.00 2.44
138 140 3.694926 TGCAATCAACATACATGGACCA 58.305 40.909 0.00 0.00 0.00 4.02
148 150 2.450609 ACATGGACCAACAGACGTAC 57.549 50.000 0.00 0.00 0.00 3.67
159 161 1.538512 ACAGACGTACAGAAAGCGCTA 59.461 47.619 12.05 0.00 0.00 4.26
165 167 2.850647 CGTACAGAAAGCGCTAGTAACC 59.149 50.000 12.05 0.58 0.00 2.85
176 178 2.426024 CGCTAGTAACCCACTTGAGCTA 59.574 50.000 0.00 0.00 36.91 3.32
255 258 6.519382 AGAACCTACAAGTTACAACCACTAC 58.481 40.000 0.00 0.00 0.00 2.73
286 289 2.094026 CCTCGACACATGACTTCCATCA 60.094 50.000 0.00 0.00 31.94 3.07
294 297 4.155462 CACATGACTTCCATCAAGACTTGG 59.845 45.833 15.13 0.05 36.72 3.61
295 298 3.423539 TGACTTCCATCAAGACTTGGG 57.576 47.619 15.13 9.45 35.82 4.12
296 299 2.040278 TGACTTCCATCAAGACTTGGGG 59.960 50.000 15.13 15.85 35.82 4.96
297 300 2.040412 GACTTCCATCAAGACTTGGGGT 59.960 50.000 15.13 4.16 35.82 4.95
298 301 2.040412 ACTTCCATCAAGACTTGGGGTC 59.960 50.000 15.13 0.00 44.80 4.46
299 302 0.991920 TCCATCAAGACTTGGGGTCC 59.008 55.000 15.13 0.00 45.54 4.46
300 303 0.698238 CCATCAAGACTTGGGGTCCA 59.302 55.000 15.13 0.00 45.54 4.02
301 304 1.340405 CCATCAAGACTTGGGGTCCAG 60.340 57.143 15.13 0.00 45.54 3.86
302 305 0.995024 ATCAAGACTTGGGGTCCAGG 59.005 55.000 15.13 0.00 45.54 4.45
303 306 0.104672 TCAAGACTTGGGGTCCAGGA 60.105 55.000 15.13 0.00 45.54 3.86
304 307 0.995024 CAAGACTTGGGGTCCAGGAT 59.005 55.000 7.35 0.00 45.54 3.24
305 308 1.355720 CAAGACTTGGGGTCCAGGATT 59.644 52.381 7.35 0.00 45.54 3.01
306 309 1.760405 AGACTTGGGGTCCAGGATTT 58.240 50.000 3.03 0.00 45.54 2.17
307 310 1.355720 AGACTTGGGGTCCAGGATTTG 59.644 52.381 3.03 0.00 45.54 2.32
308 311 1.075536 GACTTGGGGTCCAGGATTTGT 59.924 52.381 3.03 0.00 38.93 2.83
309 312 1.503347 ACTTGGGGTCCAGGATTTGTT 59.497 47.619 3.03 0.00 34.05 2.83
310 313 2.090775 ACTTGGGGTCCAGGATTTGTTT 60.091 45.455 3.03 0.00 34.05 2.83
311 314 2.785357 TGGGGTCCAGGATTTGTTTT 57.215 45.000 0.00 0.00 0.00 2.43
312 315 3.905493 TGGGGTCCAGGATTTGTTTTA 57.095 42.857 0.00 0.00 0.00 1.52
313 316 4.200447 TGGGGTCCAGGATTTGTTTTAA 57.800 40.909 0.00 0.00 0.00 1.52
314 317 4.557705 TGGGGTCCAGGATTTGTTTTAAA 58.442 39.130 0.00 0.00 0.00 1.52
315 318 4.345547 TGGGGTCCAGGATTTGTTTTAAAC 59.654 41.667 0.20 0.20 0.00 2.01
316 319 4.345547 GGGGTCCAGGATTTGTTTTAAACA 59.654 41.667 6.41 6.41 40.21 2.83
317 320 8.951729 TTGGGGTCCAGGATTTGTTTTAAACAA 61.952 37.037 17.93 17.93 41.33 2.83
331 334 8.539770 TGTTTTAAACAAAATTCAGCACAGAA 57.460 26.923 8.17 0.00 38.72 3.02
332 335 8.655092 TGTTTTAAACAAAATTCAGCACAGAAG 58.345 29.630 8.17 0.00 38.72 2.85
333 336 6.826893 TTAAACAAAATTCAGCACAGAAGC 57.173 33.333 0.00 0.00 0.00 3.86
334 337 4.389890 AACAAAATTCAGCACAGAAGCA 57.610 36.364 0.00 0.00 36.85 3.91
335 338 4.595762 ACAAAATTCAGCACAGAAGCAT 57.404 36.364 0.00 0.00 36.85 3.79
336 339 4.952460 ACAAAATTCAGCACAGAAGCATT 58.048 34.783 0.00 0.00 36.85 3.56
337 340 5.362263 ACAAAATTCAGCACAGAAGCATTT 58.638 33.333 0.00 0.00 36.85 2.32
338 341 5.235616 ACAAAATTCAGCACAGAAGCATTTG 59.764 36.000 13.88 13.88 36.56 2.32
339 342 4.595762 AATTCAGCACAGAAGCATTTGT 57.404 36.364 0.00 0.00 36.85 2.83
340 343 4.595762 ATTCAGCACAGAAGCATTTGTT 57.404 36.364 0.00 0.00 36.85 2.83
341 344 4.389890 TTCAGCACAGAAGCATTTGTTT 57.610 36.364 0.00 0.00 36.85 2.83
342 345 4.389890 TCAGCACAGAAGCATTTGTTTT 57.610 36.364 0.00 0.00 36.85 2.43
343 346 4.757594 TCAGCACAGAAGCATTTGTTTTT 58.242 34.783 0.00 0.00 36.85 1.94
344 347 5.900425 TCAGCACAGAAGCATTTGTTTTTA 58.100 33.333 0.00 0.00 36.85 1.52
345 348 5.748152 TCAGCACAGAAGCATTTGTTTTTAC 59.252 36.000 0.00 0.00 36.85 2.01
346 349 5.049828 AGCACAGAAGCATTTGTTTTTACC 58.950 37.500 0.00 0.00 36.85 2.85
347 350 4.808364 GCACAGAAGCATTTGTTTTTACCA 59.192 37.500 0.00 0.00 0.00 3.25
348 351 5.466393 GCACAGAAGCATTTGTTTTTACCAT 59.534 36.000 0.00 0.00 0.00 3.55
349 352 6.346838 GCACAGAAGCATTTGTTTTTACCATC 60.347 38.462 0.00 0.00 0.00 3.51
350 353 5.920273 ACAGAAGCATTTGTTTTTACCATCG 59.080 36.000 0.00 0.00 0.00 3.84
351 354 6.148948 CAGAAGCATTTGTTTTTACCATCGA 58.851 36.000 0.00 0.00 0.00 3.59
352 355 6.088085 CAGAAGCATTTGTTTTTACCATCGAC 59.912 38.462 0.00 0.00 0.00 4.20
353 356 5.446143 AGCATTTGTTTTTACCATCGACA 57.554 34.783 0.00 0.00 0.00 4.35
354 357 6.024552 AGCATTTGTTTTTACCATCGACAT 57.975 33.333 0.00 0.00 0.00 3.06
355 358 7.151999 AGCATTTGTTTTTACCATCGACATA 57.848 32.000 0.00 0.00 0.00 2.29
356 359 7.598278 AGCATTTGTTTTTACCATCGACATAA 58.402 30.769 0.00 0.00 0.00 1.90
357 360 8.250332 AGCATTTGTTTTTACCATCGACATAAT 58.750 29.630 0.00 0.00 0.00 1.28
358 361 8.868916 GCATTTGTTTTTACCATCGACATAATT 58.131 29.630 0.00 0.00 0.00 1.40
360 363 8.973835 TTTGTTTTTACCATCGACATAATTCC 57.026 30.769 0.00 0.00 0.00 3.01
361 364 7.689446 TGTTTTTACCATCGACATAATTCCA 57.311 32.000 0.00 0.00 0.00 3.53
362 365 7.757526 TGTTTTTACCATCGACATAATTCCAG 58.242 34.615 0.00 0.00 0.00 3.86
363 366 6.371809 TTTTACCATCGACATAATTCCAGC 57.628 37.500 0.00 0.00 0.00 4.85
364 367 3.558931 ACCATCGACATAATTCCAGCA 57.441 42.857 0.00 0.00 0.00 4.41
365 368 3.206150 ACCATCGACATAATTCCAGCAC 58.794 45.455 0.00 0.00 0.00 4.40
366 369 2.221749 CCATCGACATAATTCCAGCACG 59.778 50.000 0.00 0.00 0.00 5.34
367 370 1.934589 TCGACATAATTCCAGCACGG 58.065 50.000 0.00 0.00 0.00 4.94
368 371 1.478916 TCGACATAATTCCAGCACGGA 59.521 47.619 0.00 0.00 44.40 4.69
375 378 4.734652 TCCAGCACGGAATTTCCC 57.265 55.556 9.87 0.00 42.52 3.97
376 379 1.001393 TCCAGCACGGAATTTCCCC 60.001 57.895 9.87 0.00 42.52 4.81
377 380 1.000896 CCAGCACGGAATTTCCCCT 60.001 57.895 9.87 1.51 36.56 4.79
378 381 1.032114 CCAGCACGGAATTTCCCCTC 61.032 60.000 9.87 0.00 36.56 4.30
379 382 0.322456 CAGCACGGAATTTCCCCTCA 60.322 55.000 9.87 0.00 31.13 3.86
380 383 0.404040 AGCACGGAATTTCCCCTCAA 59.596 50.000 9.87 0.00 31.13 3.02
381 384 1.203001 AGCACGGAATTTCCCCTCAAA 60.203 47.619 9.87 0.00 31.13 2.69
382 385 1.824852 GCACGGAATTTCCCCTCAAAT 59.175 47.619 9.87 0.00 31.13 2.32
383 386 3.020984 GCACGGAATTTCCCCTCAAATA 58.979 45.455 9.87 0.00 31.13 1.40
384 387 3.445805 GCACGGAATTTCCCCTCAAATAA 59.554 43.478 9.87 0.00 31.13 1.40
385 388 4.099419 GCACGGAATTTCCCCTCAAATAAT 59.901 41.667 9.87 0.00 31.13 1.28
386 389 5.300792 GCACGGAATTTCCCCTCAAATAATA 59.699 40.000 9.87 0.00 31.13 0.98
387 390 6.515035 GCACGGAATTTCCCCTCAAATAATAG 60.515 42.308 9.87 0.00 31.13 1.73
388 391 6.546034 CACGGAATTTCCCCTCAAATAATAGT 59.454 38.462 9.87 0.00 31.13 2.12
389 392 7.068226 CACGGAATTTCCCCTCAAATAATAGTT 59.932 37.037 9.87 0.00 31.13 2.24
390 393 7.068226 ACGGAATTTCCCCTCAAATAATAGTTG 59.932 37.037 9.87 0.00 31.13 3.16
391 394 7.068226 CGGAATTTCCCCTCAAATAATAGTTGT 59.932 37.037 9.87 0.00 31.13 3.32
392 395 8.197439 GGAATTTCCCCTCAAATAATAGTTGTG 58.803 37.037 3.89 0.00 0.00 3.33
393 396 8.664669 AATTTCCCCTCAAATAATAGTTGTGT 57.335 30.769 0.29 0.00 0.00 3.72
394 397 8.664669 ATTTCCCCTCAAATAATAGTTGTGTT 57.335 30.769 0.29 0.00 0.00 3.32
395 398 7.461182 TTCCCCTCAAATAATAGTTGTGTTG 57.539 36.000 0.29 0.00 0.00 3.33
396 399 6.548321 TCCCCTCAAATAATAGTTGTGTTGT 58.452 36.000 0.29 0.00 0.00 3.32
397 400 6.432783 TCCCCTCAAATAATAGTTGTGTTGTG 59.567 38.462 0.29 0.00 0.00 3.33
398 401 6.092748 CCCTCAAATAATAGTTGTGTTGTGC 58.907 40.000 0.29 0.00 0.00 4.57
399 402 6.071952 CCCTCAAATAATAGTTGTGTTGTGCT 60.072 38.462 0.29 0.00 0.00 4.40
400 403 7.120579 CCCTCAAATAATAGTTGTGTTGTGCTA 59.879 37.037 0.29 0.00 0.00 3.49
401 404 7.962918 CCTCAAATAATAGTTGTGTTGTGCTAC 59.037 37.037 0.29 0.00 0.00 3.58
402 405 7.812648 TCAAATAATAGTTGTGTTGTGCTACC 58.187 34.615 0.29 0.00 0.00 3.18
403 406 6.417191 AATAATAGTTGTGTTGTGCTACCG 57.583 37.500 0.00 0.00 0.00 4.02
404 407 2.157834 TAGTTGTGTTGTGCTACCGG 57.842 50.000 0.00 0.00 0.00 5.28
405 408 0.179468 AGTTGTGTTGTGCTACCGGT 59.821 50.000 13.98 13.98 0.00 5.28
406 409 0.584876 GTTGTGTTGTGCTACCGGTC 59.415 55.000 12.40 0.00 0.00 4.79
407 410 0.178301 TTGTGTTGTGCTACCGGTCA 59.822 50.000 12.40 0.00 0.00 4.02
408 411 0.394938 TGTGTTGTGCTACCGGTCAT 59.605 50.000 12.40 0.00 0.00 3.06
409 412 0.796312 GTGTTGTGCTACCGGTCATG 59.204 55.000 12.40 3.73 0.00 3.07
410 413 0.682292 TGTTGTGCTACCGGTCATGA 59.318 50.000 12.40 0.00 0.00 3.07
411 414 1.337728 TGTTGTGCTACCGGTCATGAG 60.338 52.381 12.40 3.40 0.00 2.90
412 415 0.973632 TTGTGCTACCGGTCATGAGT 59.026 50.000 12.40 0.00 0.00 3.41
413 416 0.530744 TGTGCTACCGGTCATGAGTC 59.469 55.000 12.40 0.00 0.00 3.36
414 417 0.525668 GTGCTACCGGTCATGAGTCG 60.526 60.000 12.40 3.32 0.00 4.18
415 418 0.963856 TGCTACCGGTCATGAGTCGT 60.964 55.000 12.40 5.87 0.00 4.34
416 419 0.172803 GCTACCGGTCATGAGTCGTT 59.827 55.000 12.40 5.85 0.00 3.85
417 420 1.909376 CTACCGGTCATGAGTCGTTG 58.091 55.000 12.40 5.71 0.00 4.10
418 421 1.471287 CTACCGGTCATGAGTCGTTGA 59.529 52.381 12.40 0.00 0.00 3.18
419 422 0.243907 ACCGGTCATGAGTCGTTGAG 59.756 55.000 0.00 4.88 0.00 3.02
420 423 1.078759 CCGGTCATGAGTCGTTGAGC 61.079 60.000 14.68 12.62 37.09 4.26
421 424 0.109086 CGGTCATGAGTCGTTGAGCT 60.109 55.000 17.69 0.00 38.03 4.09
422 425 1.132453 CGGTCATGAGTCGTTGAGCTA 59.868 52.381 17.69 0.00 38.03 3.32
423 426 2.415491 CGGTCATGAGTCGTTGAGCTAA 60.415 50.000 17.69 0.00 38.03 3.09
424 427 3.585862 GGTCATGAGTCGTTGAGCTAAA 58.414 45.455 14.48 0.00 37.38 1.85
425 428 4.184629 GGTCATGAGTCGTTGAGCTAAAT 58.815 43.478 14.48 0.00 37.38 1.40
426 429 4.268884 GGTCATGAGTCGTTGAGCTAAATC 59.731 45.833 14.48 0.00 37.38 2.17
427 430 5.105752 GTCATGAGTCGTTGAGCTAAATCT 58.894 41.667 0.00 0.00 0.00 2.40
428 431 5.578727 GTCATGAGTCGTTGAGCTAAATCTT 59.421 40.000 0.00 0.00 0.00 2.40
429 432 6.091441 GTCATGAGTCGTTGAGCTAAATCTTT 59.909 38.462 0.00 0.00 0.00 2.52
430 433 6.650807 TCATGAGTCGTTGAGCTAAATCTTTT 59.349 34.615 0.00 0.00 0.00 2.27
431 434 6.228273 TGAGTCGTTGAGCTAAATCTTTTG 57.772 37.500 0.00 0.00 0.00 2.44
432 435 5.035784 AGTCGTTGAGCTAAATCTTTTGC 57.964 39.130 0.00 1.59 38.81 3.68
444 447 9.757227 AGCTAAATCTTTTGCTCTATGTACTAG 57.243 33.333 5.90 0.00 43.83 2.57
445 448 8.491950 GCTAAATCTTTTGCTCTATGTACTAGC 58.508 37.037 0.00 0.00 36.28 3.42
446 449 9.757227 CTAAATCTTTTGCTCTATGTACTAGCT 57.243 33.333 0.00 0.00 37.16 3.32
447 450 8.430801 AAATCTTTTGCTCTATGTACTAGCTG 57.569 34.615 0.00 0.00 37.16 4.24
448 451 6.775594 TCTTTTGCTCTATGTACTAGCTGA 57.224 37.500 0.00 0.00 37.16 4.26
449 452 7.170393 TCTTTTGCTCTATGTACTAGCTGAA 57.830 36.000 0.00 4.61 37.16 3.02
450 453 7.036220 TCTTTTGCTCTATGTACTAGCTGAAC 58.964 38.462 0.00 0.00 37.16 3.18
451 454 5.914898 TTGCTCTATGTACTAGCTGAACA 57.085 39.130 0.00 0.00 37.16 3.18
452 455 5.506686 TGCTCTATGTACTAGCTGAACAG 57.493 43.478 0.00 0.00 37.16 3.16
462 465 2.629002 GCTGAACAGCGAAAAGGGA 58.371 52.632 10.99 0.00 45.29 4.20
463 466 0.951558 GCTGAACAGCGAAAAGGGAA 59.048 50.000 10.99 0.00 45.29 3.97
464 467 1.068954 GCTGAACAGCGAAAAGGGAAG 60.069 52.381 10.99 0.00 45.29 3.46
465 468 0.951558 TGAACAGCGAAAAGGGAAGC 59.048 50.000 0.00 0.00 0.00 3.86
466 469 0.951558 GAACAGCGAAAAGGGAAGCA 59.048 50.000 0.00 0.00 0.00 3.91
467 470 1.541588 GAACAGCGAAAAGGGAAGCAT 59.458 47.619 0.00 0.00 0.00 3.79
468 471 1.620822 ACAGCGAAAAGGGAAGCATT 58.379 45.000 0.00 0.00 0.00 3.56
469 472 1.963515 ACAGCGAAAAGGGAAGCATTT 59.036 42.857 0.00 0.00 0.00 2.32
470 473 2.365293 ACAGCGAAAAGGGAAGCATTTT 59.635 40.909 0.00 0.00 0.00 1.82
471 474 3.572255 ACAGCGAAAAGGGAAGCATTTTA 59.428 39.130 0.00 0.00 0.00 1.52
472 475 4.168760 CAGCGAAAAGGGAAGCATTTTAG 58.831 43.478 0.00 0.00 0.00 1.85
473 476 4.079253 AGCGAAAAGGGAAGCATTTTAGA 58.921 39.130 0.00 0.00 0.00 2.10
474 477 4.522789 AGCGAAAAGGGAAGCATTTTAGAA 59.477 37.500 0.00 0.00 0.00 2.10
475 478 5.010617 AGCGAAAAGGGAAGCATTTTAGAAA 59.989 36.000 0.00 0.00 0.00 2.52
476 479 5.694458 GCGAAAAGGGAAGCATTTTAGAAAA 59.306 36.000 0.00 0.00 0.00 2.29
477 480 6.368791 GCGAAAAGGGAAGCATTTTAGAAAAT 59.631 34.615 0.00 0.00 39.07 1.82
478 481 7.544217 GCGAAAAGGGAAGCATTTTAGAAAATA 59.456 33.333 0.05 0.00 36.52 1.40
479 482 9.586435 CGAAAAGGGAAGCATTTTAGAAAATAT 57.414 29.630 0.05 0.00 36.52 1.28
494 497 9.840427 TTTAGAAAATATAACACAAGCTGCTTC 57.160 29.630 12.82 0.00 0.00 3.86
495 498 7.452880 AGAAAATATAACACAAGCTGCTTCA 57.547 32.000 12.82 0.00 0.00 3.02
496 499 7.533426 AGAAAATATAACACAAGCTGCTTCAG 58.467 34.615 12.82 10.28 34.12 3.02
497 500 6.824305 AAATATAACACAAGCTGCTTCAGT 57.176 33.333 12.82 10.95 33.43 3.41
498 501 6.824305 AATATAACACAAGCTGCTTCAGTT 57.176 33.333 23.76 23.76 33.43 3.16
499 502 6.824305 ATATAACACAAGCTGCTTCAGTTT 57.176 33.333 24.80 17.52 35.40 2.66
500 503 3.427161 AACACAAGCTGCTTCAGTTTC 57.573 42.857 12.82 0.00 32.86 2.78
501 504 2.648059 ACACAAGCTGCTTCAGTTTCT 58.352 42.857 12.82 0.00 32.86 2.52
502 505 3.019564 ACACAAGCTGCTTCAGTTTCTT 58.980 40.909 12.82 0.00 32.86 2.52
503 506 3.065925 ACACAAGCTGCTTCAGTTTCTTC 59.934 43.478 12.82 0.00 32.86 2.87
504 507 3.065786 CACAAGCTGCTTCAGTTTCTTCA 59.934 43.478 12.82 0.00 32.86 3.02
505 508 3.887716 ACAAGCTGCTTCAGTTTCTTCAT 59.112 39.130 12.82 0.00 32.86 2.57
506 509 5.049198 CACAAGCTGCTTCAGTTTCTTCATA 60.049 40.000 12.82 0.00 32.86 2.15
507 510 5.532406 ACAAGCTGCTTCAGTTTCTTCATAA 59.468 36.000 12.82 0.00 32.86 1.90
508 511 6.208204 ACAAGCTGCTTCAGTTTCTTCATAAT 59.792 34.615 12.82 0.00 32.86 1.28
509 512 6.830873 AGCTGCTTCAGTTTCTTCATAATT 57.169 33.333 0.00 0.00 33.43 1.40
510 513 6.618811 AGCTGCTTCAGTTTCTTCATAATTG 58.381 36.000 0.00 0.00 33.43 2.32
511 514 6.432162 AGCTGCTTCAGTTTCTTCATAATTGA 59.568 34.615 0.00 0.00 33.43 2.57
512 515 7.040201 AGCTGCTTCAGTTTCTTCATAATTGAA 60.040 33.333 0.00 0.00 35.82 2.69
513 516 7.272948 GCTGCTTCAGTTTCTTCATAATTGAAG 59.727 37.037 13.28 13.28 45.01 3.02
540 543 8.402472 CAGTTACCAAAGAAATACTGTCAAACA 58.598 33.333 0.00 0.00 0.00 2.83
541 544 8.962679 AGTTACCAAAGAAATACTGTCAAACAA 58.037 29.630 0.00 0.00 0.00 2.83
542 545 9.575783 GTTACCAAAGAAATACTGTCAAACAAA 57.424 29.630 0.00 0.00 0.00 2.83
544 547 8.871686 ACCAAAGAAATACTGTCAAACAAATC 57.128 30.769 0.00 0.00 0.00 2.17
545 548 8.474025 ACCAAAGAAATACTGTCAAACAAATCA 58.526 29.630 0.00 0.00 0.00 2.57
546 549 8.755018 CCAAAGAAATACTGTCAAACAAATCAC 58.245 33.333 0.00 0.00 0.00 3.06
547 550 9.299963 CAAAGAAATACTGTCAAACAAATCACA 57.700 29.630 0.00 0.00 0.00 3.58
548 551 9.520204 AAAGAAATACTGTCAAACAAATCACAG 57.480 29.630 0.00 0.00 41.77 3.66
549 552 7.651808 AGAAATACTGTCAAACAAATCACAGG 58.348 34.615 3.18 0.00 40.57 4.00
550 553 7.502226 AGAAATACTGTCAAACAAATCACAGGA 59.498 33.333 3.18 0.00 40.57 3.86
551 554 6.808008 ATACTGTCAAACAAATCACAGGAG 57.192 37.500 3.18 0.00 40.57 3.69
552 555 4.780815 ACTGTCAAACAAATCACAGGAGA 58.219 39.130 3.18 0.00 40.57 3.71
553 556 5.192927 ACTGTCAAACAAATCACAGGAGAA 58.807 37.500 3.18 0.00 40.57 2.87
554 557 5.652014 ACTGTCAAACAAATCACAGGAGAAA 59.348 36.000 3.18 0.00 40.57 2.52
555 558 5.890334 TGTCAAACAAATCACAGGAGAAAC 58.110 37.500 0.00 0.00 0.00 2.78
556 559 5.163561 TGTCAAACAAATCACAGGAGAAACC 60.164 40.000 0.00 0.00 39.35 3.27
570 573 7.925483 CACAGGAGAAACCATCAAATAAACAAA 59.075 33.333 0.00 0.00 42.04 2.83
608 612 8.599624 AAAAATCACAGGAGATACCATCAAAT 57.400 30.769 0.00 0.00 42.04 2.32
609 613 7.578310 AAATCACAGGAGATACCATCAAATG 57.422 36.000 0.00 0.00 42.04 2.32
618 622 8.772250 AGGAGATACCATCAAATGAAAACTCTA 58.228 33.333 0.00 0.00 42.04 2.43
619 623 9.396022 GGAGATACCATCAAATGAAAACTCTAA 57.604 33.333 0.00 0.00 38.79 2.10
624 628 7.844009 ACCATCAAATGAAAACTCTAATGCAT 58.156 30.769 0.00 0.00 0.00 3.96
625 629 8.316214 ACCATCAAATGAAAACTCTAATGCATT 58.684 29.630 17.56 17.56 0.00 3.56
626 630 9.806203 CCATCAAATGAAAACTCTAATGCATTA 57.194 29.630 17.94 17.94 0.00 1.90
664 668 4.697352 AGTCCATTGAGTGCATAAGTTGTC 59.303 41.667 0.00 0.00 0.00 3.18
677 684 2.080286 AGTTGTCGACGGAGAATTGG 57.920 50.000 11.62 0.00 0.00 3.16
682 689 2.000447 GTCGACGGAGAATTGGGAAAG 59.000 52.381 0.00 0.00 0.00 2.62
686 693 4.344102 TCGACGGAGAATTGGGAAAGATAT 59.656 41.667 0.00 0.00 0.00 1.63
688 695 4.137543 ACGGAGAATTGGGAAAGATATGC 58.862 43.478 0.00 0.00 0.00 3.14
690 697 4.137543 GGAGAATTGGGAAAGATATGCGT 58.862 43.478 0.00 0.00 0.00 5.24
723 730 6.292919 CGCCATAGGTATTGCTTTCTAAGAAC 60.293 42.308 0.00 0.00 0.00 3.01
729 736 8.635765 AGGTATTGCTTTCTAAGAACAATTCA 57.364 30.769 0.00 0.00 33.31 2.57
735 742 7.140705 TGCTTTCTAAGAACAATTCATGTGTG 58.859 34.615 0.00 0.00 42.99 3.82
736 743 7.141363 GCTTTCTAAGAACAATTCATGTGTGT 58.859 34.615 0.00 0.00 42.99 3.72
737 744 7.113965 GCTTTCTAAGAACAATTCATGTGTGTG 59.886 37.037 0.00 0.00 42.99 3.82
740 747 7.639039 TCTAAGAACAATTCATGTGTGTGTTC 58.361 34.615 18.23 18.23 42.99 3.18
756 763 1.001974 TGTTCTCCACAGGAATGACGG 59.998 52.381 0.00 0.00 0.00 4.79
810 1114 1.076995 GGAAAATAGGCGGCCCAGT 60.077 57.895 17.02 0.00 0.00 4.00
812 1116 1.594331 GAAAATAGGCGGCCCAGTAG 58.406 55.000 17.02 0.00 0.00 2.57
892 5662 4.800993 CGACACTCAAGAATAGTCATCCAC 59.199 45.833 0.00 0.00 0.00 4.02
978 5859 8.177663 AGTAGAGTTGCAATTTGTATTGAATCG 58.822 33.333 0.59 0.00 43.12 3.34
1226 6123 2.202236 ATCAGCCCGTGCAACTGGAT 62.202 55.000 2.58 0.00 45.00 3.41
1681 6966 3.758554 CCAAAACAAGGTATCAGGTCCTG 59.241 47.826 13.21 13.21 33.97 3.86
2058 7631 3.798202 CTCAATACCCACAGAACTAGGC 58.202 50.000 0.00 0.00 0.00 3.93
2075 7648 1.065854 AGGCAACCTCACTATGCTCAC 60.066 52.381 0.00 0.00 39.94 3.51
2086 7659 5.865085 TCACTATGCTCACTAACCTTGTTT 58.135 37.500 0.00 0.00 0.00 2.83
2088 7661 6.204688 TCACTATGCTCACTAACCTTGTTTTG 59.795 38.462 0.00 0.00 0.00 2.44
2208 8141 4.090761 TCCTGCCAGCTTAGGAAATATG 57.909 45.455 8.34 0.00 40.03 1.78
2235 8312 5.245584 ACCTAGTAGCACTATCCCTCTAC 57.754 47.826 0.00 0.00 29.08 2.59
2286 8508 4.038271 AGAGATTGGCAACCTGATGAAA 57.962 40.909 0.00 0.00 0.00 2.69
2296 8518 4.978580 GCAACCTGATGAAACTCAAAACTC 59.021 41.667 0.00 0.00 0.00 3.01
2298 8520 6.204359 CAACCTGATGAAACTCAAAACTCTG 58.796 40.000 0.00 0.00 0.00 3.35
2310 8532 4.713553 TCAAAACTCTGTGGTTGCATCTA 58.286 39.130 0.00 0.00 0.00 1.98
2326 8548 6.024552 TGCATCTAAACCAAATTTCAGGAC 57.975 37.500 1.72 0.00 0.00 3.85
2358 8580 2.387757 ACTTTTGGGAAGCTGCAAAGA 58.612 42.857 9.44 0.00 0.00 2.52
2381 8603 9.558396 AAGAATCCATGATCTAAGAATCTTCAC 57.442 33.333 0.00 0.00 0.00 3.18
2442 8664 6.635030 AACCTCACAAACCTTGTTAATCTC 57.365 37.500 0.00 0.00 43.23 2.75
2444 8666 4.755123 CCTCACAAACCTTGTTAATCTCGT 59.245 41.667 0.00 0.00 43.23 4.18
2451 8673 7.442969 ACAAACCTTGTTAATCTCGTGATAACA 59.557 33.333 0.00 8.78 42.22 2.41
2509 8731 4.981806 TGTTCAGGTGGAAAACTTCAAG 57.018 40.909 0.00 0.00 37.23 3.02
2525 8747 5.014858 ACTTCAAGATCTCCATGTTGCATT 58.985 37.500 0.00 0.00 34.03 3.56
2526 8748 4.976224 TCAAGATCTCCATGTTGCATTG 57.024 40.909 0.00 0.00 34.03 2.82
2582 8804 0.515564 ACATGCGCGAGTTTGGTTAC 59.484 50.000 12.10 0.00 0.00 2.50
2644 8866 2.752354 CAGGATTTTGGTGCGTATCCAA 59.248 45.455 0.00 4.05 42.29 3.53
2662 8884 4.272489 TCCAAATCTCACATGGATGAACC 58.728 43.478 0.00 0.00 38.30 3.62
2706 8928 4.162320 GGTCACATCTCACCAAATCTAGGA 59.838 45.833 0.00 0.00 32.33 2.94
2722 8944 1.710816 AGGAGCATCTACCCAGCTAC 58.289 55.000 0.00 0.00 39.02 3.58
2733 8959 6.770746 TCTACCCAGCTACAAGTACTAAAG 57.229 41.667 0.00 0.00 0.00 1.85
2941 9168 5.079689 AGAAAAGCTAAGCAGTCTAGGAC 57.920 43.478 0.00 0.00 0.00 3.85
3163 9391 6.069673 TGGGAAGTTGGAGATGCTAGAATTTA 60.070 38.462 0.00 0.00 0.00 1.40
3225 9453 0.245539 CCTTTGCAAGCATGGTGAGG 59.754 55.000 0.00 0.00 0.00 3.86
3355 9589 7.634817 GTCACGTTAATGCATATTCACTTGTAC 59.365 37.037 0.00 0.00 0.00 2.90
3443 9681 2.924757 CTGATCAGCAGCTATCCCAA 57.075 50.000 10.38 0.00 37.90 4.12
3522 9761 7.097342 AGTTGGACGCGTATATATTTAAACG 57.903 36.000 13.97 2.10 38.34 3.60
3851 10126 3.148412 CATCTCACCACCATTCAACACA 58.852 45.455 0.00 0.00 0.00 3.72
3854 10129 2.687425 CTCACCACCATTCAACACACAA 59.313 45.455 0.00 0.00 0.00 3.33
3862 10137 4.240888 CCATTCAACACACAAACACACAA 58.759 39.130 0.00 0.00 0.00 3.33
3976 11447 2.847234 TGGCACTTCCCTCCGTGT 60.847 61.111 0.00 0.00 33.78 4.49
4099 11572 1.153369 GGCATCTTGCGGCTCTACA 60.153 57.895 0.00 0.00 46.21 2.74
4100 11573 0.533755 GGCATCTTGCGGCTCTACAT 60.534 55.000 0.00 0.00 46.21 2.29
4101 11574 0.585357 GCATCTTGCGGCTCTACATG 59.415 55.000 0.00 0.00 31.71 3.21
4102 11575 1.224075 CATCTTGCGGCTCTACATGG 58.776 55.000 0.00 0.00 0.00 3.66
4103 11576 0.533755 ATCTTGCGGCTCTACATGGC 60.534 55.000 0.00 0.00 0.00 4.40
4108 11581 4.683432 GGCTCTACATGGCGATCC 57.317 61.111 0.00 0.00 0.00 3.36
4121 11594 3.692367 GATCCAATCGTCGCCGCG 61.692 66.667 6.39 6.39 0.00 6.46
4125 11598 3.988385 CAATCGTCGCCGCGGATG 61.988 66.667 33.48 21.11 0.00 3.51
4126 11599 4.508128 AATCGTCGCCGCGGATGT 62.508 61.111 33.48 4.51 0.00 3.06
4127 11600 4.508128 ATCGTCGCCGCGGATGTT 62.508 61.111 33.48 6.56 0.00 2.71
4131 11604 4.155733 TCGCCGCGGATGTTCCAT 62.156 61.111 33.48 0.00 35.91 3.41
4132 11605 3.202001 CGCCGCGGATGTTCCATT 61.202 61.111 33.48 0.00 35.91 3.16
4133 11606 2.408835 GCCGCGGATGTTCCATTG 59.591 61.111 33.48 0.00 35.91 2.82
4134 11607 2.406616 GCCGCGGATGTTCCATTGT 61.407 57.895 33.48 0.00 35.91 2.71
4135 11608 1.933115 GCCGCGGATGTTCCATTGTT 61.933 55.000 33.48 0.00 35.91 2.83
4136 11609 0.525761 CCGCGGATGTTCCATTGTTT 59.474 50.000 24.07 0.00 35.91 2.83
4137 11610 1.616620 CGCGGATGTTCCATTGTTTG 58.383 50.000 0.00 0.00 35.91 2.93
4138 11611 1.198867 CGCGGATGTTCCATTGTTTGA 59.801 47.619 0.00 0.00 35.91 2.69
4139 11612 2.159393 CGCGGATGTTCCATTGTTTGAT 60.159 45.455 0.00 0.00 35.91 2.57
4140 11613 3.438360 GCGGATGTTCCATTGTTTGATC 58.562 45.455 0.00 0.00 35.91 2.92
4141 11614 3.129287 GCGGATGTTCCATTGTTTGATCT 59.871 43.478 0.00 0.00 35.91 2.75
4142 11615 4.335315 GCGGATGTTCCATTGTTTGATCTA 59.665 41.667 0.00 0.00 35.91 1.98
4143 11616 5.504665 GCGGATGTTCCATTGTTTGATCTAG 60.505 44.000 0.00 0.00 35.91 2.43
4144 11617 5.008019 CGGATGTTCCATTGTTTGATCTAGG 59.992 44.000 0.00 0.00 35.91 3.02
4145 11618 6.122277 GGATGTTCCATTGTTTGATCTAGGA 58.878 40.000 0.00 0.00 36.28 2.94
4146 11619 6.038714 GGATGTTCCATTGTTTGATCTAGGAC 59.961 42.308 0.00 0.00 36.28 3.85
4147 11620 4.935205 TGTTCCATTGTTTGATCTAGGACG 59.065 41.667 0.00 0.00 0.00 4.79
4148 11621 4.137116 TCCATTGTTTGATCTAGGACGG 57.863 45.455 0.00 0.00 0.00 4.79
4149 11622 2.614057 CCATTGTTTGATCTAGGACGGC 59.386 50.000 0.00 0.00 0.00 5.68
4150 11623 2.004583 TTGTTTGATCTAGGACGGCG 57.995 50.000 4.80 4.80 0.00 6.46
4151 11624 0.892755 TGTTTGATCTAGGACGGCGT 59.107 50.000 14.65 14.65 0.00 5.68
4152 11625 1.135199 TGTTTGATCTAGGACGGCGTC 60.135 52.381 30.72 30.72 0.00 5.19
4355 11907 1.514087 GCGGACGTTCTATGACCCA 59.486 57.895 0.00 0.00 0.00 4.51
4362 11914 4.501058 GGACGTTCTATGACCCAATCTACC 60.501 50.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.348213 CGGTAGTGGTGAAATAAAGGTTTCAG 60.348 42.308 2.59 0.00 45.71 3.02
6 7 5.470777 CGGTAGTGGTGAAATAAAGGTTTCA 59.529 40.000 0.00 0.00 43.66 2.69
10 11 3.328637 ACCGGTAGTGGTGAAATAAAGGT 59.671 43.478 4.49 0.00 41.85 3.50
11 12 3.946606 ACCGGTAGTGGTGAAATAAAGG 58.053 45.455 4.49 0.00 41.85 3.11
24 25 5.365605 TGATGGAATTCTATTCACCGGTAGT 59.634 40.000 6.87 0.00 0.00 2.73
25 26 5.696724 GTGATGGAATTCTATTCACCGGTAG 59.303 44.000 6.87 0.00 0.00 3.18
26 27 5.454187 GGTGATGGAATTCTATTCACCGGTA 60.454 44.000 25.23 0.00 37.10 4.02
27 28 4.451900 GTGATGGAATTCTATTCACCGGT 58.548 43.478 0.00 0.00 0.00 5.28
28 29 3.815401 GGTGATGGAATTCTATTCACCGG 59.185 47.826 25.23 0.00 37.10 5.28
30 31 8.697507 AATTAGGTGATGGAATTCTATTCACC 57.302 34.615 28.54 28.54 44.48 4.02
31 32 9.956720 CAAATTAGGTGATGGAATTCTATTCAC 57.043 33.333 19.07 19.07 0.00 3.18
32 33 9.699410 ACAAATTAGGTGATGGAATTCTATTCA 57.301 29.630 5.71 3.95 0.00 2.57
34 35 8.840321 CGACAAATTAGGTGATGGAATTCTATT 58.160 33.333 5.71 0.00 0.00 1.73
35 36 7.993183 ACGACAAATTAGGTGATGGAATTCTAT 59.007 33.333 3.64 3.64 0.00 1.98
36 37 7.335627 ACGACAAATTAGGTGATGGAATTCTA 58.664 34.615 5.23 0.00 0.00 2.10
37 38 6.180472 ACGACAAATTAGGTGATGGAATTCT 58.820 36.000 5.23 0.00 0.00 2.40
38 39 6.436843 ACGACAAATTAGGTGATGGAATTC 57.563 37.500 0.00 0.00 0.00 2.17
39 40 6.208599 ACAACGACAAATTAGGTGATGGAATT 59.791 34.615 0.00 0.00 0.00 2.17
40 41 5.710099 ACAACGACAAATTAGGTGATGGAAT 59.290 36.000 0.00 0.00 0.00 3.01
41 42 5.049060 CACAACGACAAATTAGGTGATGGAA 60.049 40.000 0.00 0.00 0.00 3.53
42 43 4.454161 CACAACGACAAATTAGGTGATGGA 59.546 41.667 0.00 0.00 0.00 3.41
43 44 4.722194 CACAACGACAAATTAGGTGATGG 58.278 43.478 0.00 0.00 0.00 3.51
44 45 4.083324 AGCACAACGACAAATTAGGTGATG 60.083 41.667 0.00 0.00 0.00 3.07
45 46 4.072131 AGCACAACGACAAATTAGGTGAT 58.928 39.130 0.00 0.00 0.00 3.06
46 47 3.249799 CAGCACAACGACAAATTAGGTGA 59.750 43.478 0.00 0.00 0.00 4.02
47 48 3.554524 CAGCACAACGACAAATTAGGTG 58.445 45.455 0.00 0.00 0.00 4.00
48 49 2.031157 GCAGCACAACGACAAATTAGGT 60.031 45.455 0.00 0.00 0.00 3.08
49 50 2.584791 GCAGCACAACGACAAATTAGG 58.415 47.619 0.00 0.00 0.00 2.69
50 51 2.233355 CGCAGCACAACGACAAATTAG 58.767 47.619 0.00 0.00 0.00 1.73
51 52 2.308347 CGCAGCACAACGACAAATTA 57.692 45.000 0.00 0.00 0.00 1.40
52 53 3.162499 CGCAGCACAACGACAAATT 57.838 47.368 0.00 0.00 0.00 1.82
53 54 4.920662 CGCAGCACAACGACAAAT 57.079 50.000 0.00 0.00 0.00 2.32
69 70 3.414700 GACTCGTGGCTGGTTGCG 61.415 66.667 0.00 0.00 44.05 4.85
70 71 3.050275 GGACTCGTGGCTGGTTGC 61.050 66.667 0.00 0.00 41.94 4.17
71 72 1.071471 AAGGACTCGTGGCTGGTTG 59.929 57.895 0.00 0.00 0.00 3.77
72 73 1.071471 CAAGGACTCGTGGCTGGTT 59.929 57.895 0.00 0.00 0.00 3.67
73 74 1.821061 CTCAAGGACTCGTGGCTGGT 61.821 60.000 0.00 0.00 0.00 4.00
74 75 1.079543 CTCAAGGACTCGTGGCTGG 60.080 63.158 0.00 0.00 0.00 4.85
75 76 1.739562 GCTCAAGGACTCGTGGCTG 60.740 63.158 0.00 0.00 0.00 4.85
76 77 1.758440 TTGCTCAAGGACTCGTGGCT 61.758 55.000 0.00 0.00 0.00 4.75
77 78 0.884704 TTTGCTCAAGGACTCGTGGC 60.885 55.000 0.00 0.00 0.00 5.01
78 79 1.593196 TTTTGCTCAAGGACTCGTGG 58.407 50.000 0.00 0.00 0.00 4.94
125 127 2.301870 ACGTCTGTTGGTCCATGTATGT 59.698 45.455 0.00 0.00 0.00 2.29
135 137 2.480845 GCTTTCTGTACGTCTGTTGGT 58.519 47.619 0.00 0.00 0.00 3.67
138 140 1.137513 GCGCTTTCTGTACGTCTGTT 58.862 50.000 0.00 0.00 0.00 3.16
148 150 2.000447 GTGGGTTACTAGCGCTTTCTG 59.000 52.381 18.68 6.54 0.00 3.02
159 161 5.763876 AATCTTAGCTCAAGTGGGTTACT 57.236 39.130 0.00 0.00 42.89 2.24
165 167 8.099364 TGAAGTAAAAATCTTAGCTCAAGTGG 57.901 34.615 0.00 0.00 35.58 4.00
176 178 6.096846 ACCACACAAGCTGAAGTAAAAATCTT 59.903 34.615 0.00 0.00 0.00 2.40
255 258 0.613260 TGTGTCGAGGGGAAATGAGG 59.387 55.000 0.00 0.00 0.00 3.86
286 289 1.760405 AATCCTGGACCCCAAGTCTT 58.240 50.000 0.00 0.00 45.54 3.01
294 297 5.538849 TGTTTAAAACAAATCCTGGACCC 57.461 39.130 0.00 0.00 38.72 4.46
306 309 8.539770 TTCTGTGCTGAATTTTGTTTAAAACA 57.460 26.923 0.00 0.00 38.50 2.83
307 310 7.635973 GCTTCTGTGCTGAATTTTGTTTAAAAC 59.364 33.333 0.00 0.00 38.50 2.43
308 311 7.332926 TGCTTCTGTGCTGAATTTTGTTTAAAA 59.667 29.630 0.00 0.00 39.86 1.52
309 312 6.815641 TGCTTCTGTGCTGAATTTTGTTTAAA 59.184 30.769 0.00 0.00 0.00 1.52
310 313 6.336566 TGCTTCTGTGCTGAATTTTGTTTAA 58.663 32.000 0.00 0.00 0.00 1.52
311 314 5.900425 TGCTTCTGTGCTGAATTTTGTTTA 58.100 33.333 0.00 0.00 0.00 2.01
312 315 4.757594 TGCTTCTGTGCTGAATTTTGTTT 58.242 34.783 0.00 0.00 0.00 2.83
313 316 4.389890 TGCTTCTGTGCTGAATTTTGTT 57.610 36.364 0.00 0.00 0.00 2.83
314 317 4.595762 ATGCTTCTGTGCTGAATTTTGT 57.404 36.364 0.00 0.00 0.00 2.83
315 318 5.235616 ACAAATGCTTCTGTGCTGAATTTTG 59.764 36.000 13.59 13.59 32.62 2.44
316 319 5.362263 ACAAATGCTTCTGTGCTGAATTTT 58.638 33.333 0.00 0.00 0.00 1.82
317 320 4.952460 ACAAATGCTTCTGTGCTGAATTT 58.048 34.783 0.00 0.00 0.00 1.82
318 321 4.595762 ACAAATGCTTCTGTGCTGAATT 57.404 36.364 0.00 0.00 0.00 2.17
319 322 4.595762 AACAAATGCTTCTGTGCTGAAT 57.404 36.364 0.00 0.00 0.00 2.57
320 323 4.389890 AAACAAATGCTTCTGTGCTGAA 57.610 36.364 0.00 0.00 0.00 3.02
321 324 4.389890 AAAACAAATGCTTCTGTGCTGA 57.610 36.364 0.00 0.00 0.00 4.26
322 325 5.050837 GGTAAAAACAAATGCTTCTGTGCTG 60.051 40.000 0.00 0.00 0.00 4.41
323 326 5.049828 GGTAAAAACAAATGCTTCTGTGCT 58.950 37.500 0.00 0.00 0.00 4.40
324 327 4.808364 TGGTAAAAACAAATGCTTCTGTGC 59.192 37.500 0.00 0.00 0.00 4.57
325 328 6.129115 CGATGGTAAAAACAAATGCTTCTGTG 60.129 38.462 0.00 0.00 0.00 3.66
326 329 5.920273 CGATGGTAAAAACAAATGCTTCTGT 59.080 36.000 0.00 0.00 0.00 3.41
327 330 6.088085 GTCGATGGTAAAAACAAATGCTTCTG 59.912 38.462 0.00 0.00 0.00 3.02
328 331 6.149633 GTCGATGGTAAAAACAAATGCTTCT 58.850 36.000 0.00 0.00 0.00 2.85
329 332 5.918011 TGTCGATGGTAAAAACAAATGCTTC 59.082 36.000 0.00 0.00 0.00 3.86
330 333 5.837437 TGTCGATGGTAAAAACAAATGCTT 58.163 33.333 0.00 0.00 0.00 3.91
331 334 5.446143 TGTCGATGGTAAAAACAAATGCT 57.554 34.783 0.00 0.00 0.00 3.79
332 335 7.804614 TTATGTCGATGGTAAAAACAAATGC 57.195 32.000 0.00 0.00 0.00 3.56
334 337 9.581099 GGAATTATGTCGATGGTAAAAACAAAT 57.419 29.630 0.00 0.00 0.00 2.32
335 338 8.577296 TGGAATTATGTCGATGGTAAAAACAAA 58.423 29.630 0.00 0.00 0.00 2.83
336 339 8.112016 TGGAATTATGTCGATGGTAAAAACAA 57.888 30.769 0.00 0.00 0.00 2.83
337 340 7.627513 GCTGGAATTATGTCGATGGTAAAAACA 60.628 37.037 0.00 0.00 0.00 2.83
338 341 6.691388 GCTGGAATTATGTCGATGGTAAAAAC 59.309 38.462 0.00 0.00 0.00 2.43
339 342 6.375736 TGCTGGAATTATGTCGATGGTAAAAA 59.624 34.615 0.00 0.00 0.00 1.94
340 343 5.883115 TGCTGGAATTATGTCGATGGTAAAA 59.117 36.000 0.00 0.00 0.00 1.52
341 344 5.295787 GTGCTGGAATTATGTCGATGGTAAA 59.704 40.000 0.00 0.00 0.00 2.01
342 345 4.814234 GTGCTGGAATTATGTCGATGGTAA 59.186 41.667 0.00 0.00 0.00 2.85
343 346 4.377021 GTGCTGGAATTATGTCGATGGTA 58.623 43.478 0.00 0.00 0.00 3.25
344 347 3.206150 GTGCTGGAATTATGTCGATGGT 58.794 45.455 0.00 0.00 0.00 3.55
345 348 2.221749 CGTGCTGGAATTATGTCGATGG 59.778 50.000 0.00 0.00 0.00 3.51
346 349 2.221749 CCGTGCTGGAATTATGTCGATG 59.778 50.000 0.00 0.00 42.00 3.84
347 350 2.102420 TCCGTGCTGGAATTATGTCGAT 59.898 45.455 0.00 0.00 46.38 3.59
348 351 1.478916 TCCGTGCTGGAATTATGTCGA 59.521 47.619 0.00 0.00 46.38 4.20
349 352 1.934589 TCCGTGCTGGAATTATGTCG 58.065 50.000 0.00 0.00 46.38 4.35
359 362 1.000896 AGGGGAAATTCCGTGCTGG 60.001 57.895 5.87 0.00 37.43 4.85
360 363 0.322456 TGAGGGGAAATTCCGTGCTG 60.322 55.000 5.87 0.00 37.43 4.41
361 364 0.404040 TTGAGGGGAAATTCCGTGCT 59.596 50.000 5.87 0.00 37.43 4.40
362 365 1.253100 TTTGAGGGGAAATTCCGTGC 58.747 50.000 5.87 0.00 37.43 5.34
363 366 5.852282 ATTATTTGAGGGGAAATTCCGTG 57.148 39.130 5.87 0.00 37.43 4.94
364 367 6.669631 ACTATTATTTGAGGGGAAATTCCGT 58.330 36.000 5.87 0.00 37.43 4.69
365 368 7.068226 ACAACTATTATTTGAGGGGAAATTCCG 59.932 37.037 5.87 0.00 37.43 4.30
366 369 8.197439 CACAACTATTATTTGAGGGGAAATTCC 58.803 37.037 2.79 2.79 35.23 3.01
367 370 8.749354 ACACAACTATTATTTGAGGGGAAATTC 58.251 33.333 1.23 0.00 0.00 2.17
368 371 8.664669 ACACAACTATTATTTGAGGGGAAATT 57.335 30.769 1.23 0.00 0.00 1.82
369 372 8.531146 CAACACAACTATTATTTGAGGGGAAAT 58.469 33.333 1.23 0.00 0.00 2.17
370 373 7.507616 ACAACACAACTATTATTTGAGGGGAAA 59.492 33.333 1.23 0.00 0.00 3.13
371 374 7.007723 ACAACACAACTATTATTTGAGGGGAA 58.992 34.615 1.23 0.00 0.00 3.97
372 375 6.432783 CACAACACAACTATTATTTGAGGGGA 59.567 38.462 1.23 0.00 0.00 4.81
373 376 6.620678 CACAACACAACTATTATTTGAGGGG 58.379 40.000 1.23 0.00 0.00 4.79
374 377 6.071952 AGCACAACACAACTATTATTTGAGGG 60.072 38.462 1.23 0.00 0.00 4.30
375 378 6.913170 AGCACAACACAACTATTATTTGAGG 58.087 36.000 1.23 0.00 0.00 3.86
376 379 7.962918 GGTAGCACAACACAACTATTATTTGAG 59.037 37.037 1.23 0.00 0.00 3.02
377 380 7.360522 CGGTAGCACAACACAACTATTATTTGA 60.361 37.037 1.23 0.00 0.00 2.69
378 381 6.740905 CGGTAGCACAACACAACTATTATTTG 59.259 38.462 0.00 0.00 0.00 2.32
379 382 6.128117 CCGGTAGCACAACACAACTATTATTT 60.128 38.462 0.00 0.00 0.00 1.40
380 383 5.353123 CCGGTAGCACAACACAACTATTATT 59.647 40.000 0.00 0.00 0.00 1.40
381 384 4.873827 CCGGTAGCACAACACAACTATTAT 59.126 41.667 0.00 0.00 0.00 1.28
382 385 4.247258 CCGGTAGCACAACACAACTATTA 58.753 43.478 0.00 0.00 0.00 0.98
383 386 3.071479 CCGGTAGCACAACACAACTATT 58.929 45.455 0.00 0.00 0.00 1.73
384 387 2.038033 ACCGGTAGCACAACACAACTAT 59.962 45.455 4.49 0.00 0.00 2.12
385 388 1.413445 ACCGGTAGCACAACACAACTA 59.587 47.619 4.49 0.00 0.00 2.24
386 389 0.179468 ACCGGTAGCACAACACAACT 59.821 50.000 4.49 0.00 0.00 3.16
387 390 0.584876 GACCGGTAGCACAACACAAC 59.415 55.000 7.34 0.00 0.00 3.32
388 391 0.178301 TGACCGGTAGCACAACACAA 59.822 50.000 7.34 0.00 0.00 3.33
389 392 0.394938 ATGACCGGTAGCACAACACA 59.605 50.000 7.34 0.00 0.00 3.72
390 393 0.796312 CATGACCGGTAGCACAACAC 59.204 55.000 7.34 0.00 0.00 3.32
391 394 0.682292 TCATGACCGGTAGCACAACA 59.318 50.000 7.34 0.00 0.00 3.33
392 395 1.337823 ACTCATGACCGGTAGCACAAC 60.338 52.381 7.34 0.00 0.00 3.32
393 396 0.973632 ACTCATGACCGGTAGCACAA 59.026 50.000 7.34 0.00 0.00 3.33
394 397 0.530744 GACTCATGACCGGTAGCACA 59.469 55.000 7.34 0.18 0.00 4.57
395 398 0.525668 CGACTCATGACCGGTAGCAC 60.526 60.000 7.34 0.00 0.00 4.40
396 399 0.963856 ACGACTCATGACCGGTAGCA 60.964 55.000 7.34 1.62 0.00 3.49
397 400 0.172803 AACGACTCATGACCGGTAGC 59.827 55.000 7.34 0.00 0.00 3.58
398 401 1.471287 TCAACGACTCATGACCGGTAG 59.529 52.381 7.34 3.15 0.00 3.18
399 402 1.471287 CTCAACGACTCATGACCGGTA 59.529 52.381 7.34 0.00 0.00 4.02
400 403 0.243907 CTCAACGACTCATGACCGGT 59.756 55.000 6.92 6.92 0.00 5.28
401 404 1.078759 GCTCAACGACTCATGACCGG 61.079 60.000 14.79 0.00 0.00 5.28
402 405 0.109086 AGCTCAACGACTCATGACCG 60.109 55.000 10.25 10.25 0.00 4.79
403 406 2.941453 TAGCTCAACGACTCATGACC 57.059 50.000 0.00 0.00 0.00 4.02
404 407 5.105752 AGATTTAGCTCAACGACTCATGAC 58.894 41.667 0.00 0.00 0.00 3.06
405 408 5.330455 AGATTTAGCTCAACGACTCATGA 57.670 39.130 0.00 0.00 0.00 3.07
406 409 6.414408 AAAGATTTAGCTCAACGACTCATG 57.586 37.500 0.00 0.00 0.00 3.07
407 410 6.621596 GCAAAAGATTTAGCTCAACGACTCAT 60.622 38.462 0.00 0.00 0.00 2.90
408 411 5.334105 GCAAAAGATTTAGCTCAACGACTCA 60.334 40.000 0.00 0.00 0.00 3.41
409 412 5.082723 GCAAAAGATTTAGCTCAACGACTC 58.917 41.667 0.00 0.00 0.00 3.36
410 413 4.757149 AGCAAAAGATTTAGCTCAACGACT 59.243 37.500 0.00 0.00 30.05 4.18
411 414 5.035784 AGCAAAAGATTTAGCTCAACGAC 57.964 39.130 0.00 0.00 30.05 4.34
418 421 9.757227 CTAGTACATAGAGCAAAAGATTTAGCT 57.243 33.333 0.00 0.00 40.60 3.32
419 422 8.491950 GCTAGTACATAGAGCAAAAGATTTAGC 58.508 37.037 0.00 0.00 36.20 3.09
420 423 9.757227 AGCTAGTACATAGAGCAAAAGATTTAG 57.243 33.333 10.48 0.00 38.73 1.85
421 424 9.534565 CAGCTAGTACATAGAGCAAAAGATTTA 57.465 33.333 10.48 0.00 38.73 1.40
422 425 8.260818 TCAGCTAGTACATAGAGCAAAAGATTT 58.739 33.333 10.48 0.00 38.73 2.17
423 426 7.786030 TCAGCTAGTACATAGAGCAAAAGATT 58.214 34.615 10.48 0.00 38.73 2.40
424 427 7.353414 TCAGCTAGTACATAGAGCAAAAGAT 57.647 36.000 10.48 0.00 38.73 2.40
425 428 6.775594 TCAGCTAGTACATAGAGCAAAAGA 57.224 37.500 10.48 2.57 38.73 2.52
426 429 6.813649 TGTTCAGCTAGTACATAGAGCAAAAG 59.186 38.462 10.48 0.80 38.73 2.27
427 430 6.697395 TGTTCAGCTAGTACATAGAGCAAAA 58.303 36.000 10.48 3.38 38.73 2.44
428 431 6.280855 TGTTCAGCTAGTACATAGAGCAAA 57.719 37.500 10.48 3.64 38.73 3.68
429 432 5.679894 GCTGTTCAGCTAGTACATAGAGCAA 60.680 44.000 16.29 0.00 38.73 3.91
430 433 4.202060 GCTGTTCAGCTAGTACATAGAGCA 60.202 45.833 16.29 2.47 38.73 4.26
431 434 4.295051 GCTGTTCAGCTAGTACATAGAGC 58.705 47.826 16.29 0.00 32.76 4.09
432 435 4.273724 TCGCTGTTCAGCTAGTACATAGAG 59.726 45.833 20.12 3.18 32.76 2.43
433 436 4.196971 TCGCTGTTCAGCTAGTACATAGA 58.803 43.478 20.12 6.27 32.76 1.98
434 437 4.553756 TCGCTGTTCAGCTAGTACATAG 57.446 45.455 20.12 4.25 34.31 2.23
435 438 4.976224 TTCGCTGTTCAGCTAGTACATA 57.024 40.909 20.12 0.00 0.00 2.29
436 439 3.868757 TTCGCTGTTCAGCTAGTACAT 57.131 42.857 20.12 0.00 0.00 2.29
437 440 3.653539 TTTCGCTGTTCAGCTAGTACA 57.346 42.857 20.12 0.00 0.00 2.90
438 441 3.368236 CCTTTTCGCTGTTCAGCTAGTAC 59.632 47.826 20.12 0.00 0.00 2.73
439 442 3.585862 CCTTTTCGCTGTTCAGCTAGTA 58.414 45.455 20.12 5.21 0.00 1.82
440 443 2.417719 CCTTTTCGCTGTTCAGCTAGT 58.582 47.619 20.12 0.00 0.00 2.57
441 444 1.734465 CCCTTTTCGCTGTTCAGCTAG 59.266 52.381 20.12 12.31 0.00 3.42
442 445 1.346395 TCCCTTTTCGCTGTTCAGCTA 59.654 47.619 20.12 8.83 0.00 3.32
443 446 0.108585 TCCCTTTTCGCTGTTCAGCT 59.891 50.000 20.12 0.00 0.00 4.24
444 447 0.951558 TTCCCTTTTCGCTGTTCAGC 59.048 50.000 13.97 13.97 0.00 4.26
445 448 1.068954 GCTTCCCTTTTCGCTGTTCAG 60.069 52.381 0.00 0.00 0.00 3.02
446 449 0.951558 GCTTCCCTTTTCGCTGTTCA 59.048 50.000 0.00 0.00 0.00 3.18
447 450 0.951558 TGCTTCCCTTTTCGCTGTTC 59.048 50.000 0.00 0.00 0.00 3.18
448 451 1.620822 ATGCTTCCCTTTTCGCTGTT 58.379 45.000 0.00 0.00 0.00 3.16
449 452 1.620822 AATGCTTCCCTTTTCGCTGT 58.379 45.000 0.00 0.00 0.00 4.40
450 453 2.730550 AAATGCTTCCCTTTTCGCTG 57.269 45.000 0.00 0.00 0.00 5.18
451 454 4.079253 TCTAAAATGCTTCCCTTTTCGCT 58.921 39.130 0.00 0.00 0.00 4.93
452 455 4.434713 TCTAAAATGCTTCCCTTTTCGC 57.565 40.909 0.00 0.00 0.00 4.70
453 456 7.889589 ATTTTCTAAAATGCTTCCCTTTTCG 57.110 32.000 0.00 0.00 37.24 3.46
468 471 9.840427 GAAGCAGCTTGTGTTATATTTTCTAAA 57.160 29.630 13.91 0.00 0.00 1.85
469 472 9.008965 TGAAGCAGCTTGTGTTATATTTTCTAA 57.991 29.630 13.91 0.00 0.00 2.10
470 473 8.560355 TGAAGCAGCTTGTGTTATATTTTCTA 57.440 30.769 13.91 0.00 0.00 2.10
471 474 7.175641 ACTGAAGCAGCTTGTGTTATATTTTCT 59.824 33.333 13.91 0.00 34.37 2.52
472 475 7.308435 ACTGAAGCAGCTTGTGTTATATTTTC 58.692 34.615 13.91 0.00 34.37 2.29
473 476 7.219484 ACTGAAGCAGCTTGTGTTATATTTT 57.781 32.000 13.91 0.00 34.37 1.82
474 477 6.824305 ACTGAAGCAGCTTGTGTTATATTT 57.176 33.333 13.91 0.00 34.37 1.40
475 478 6.824305 AACTGAAGCAGCTTGTGTTATATT 57.176 33.333 13.91 0.00 34.37 1.28
476 479 6.656693 AGAAACTGAAGCAGCTTGTGTTATAT 59.343 34.615 13.91 2.67 34.37 0.86
477 480 5.997746 AGAAACTGAAGCAGCTTGTGTTATA 59.002 36.000 13.91 0.00 34.37 0.98
478 481 4.823989 AGAAACTGAAGCAGCTTGTGTTAT 59.176 37.500 13.91 6.96 34.37 1.89
479 482 4.199310 AGAAACTGAAGCAGCTTGTGTTA 58.801 39.130 13.91 0.00 34.37 2.41
480 483 3.019564 AGAAACTGAAGCAGCTTGTGTT 58.980 40.909 13.91 13.76 34.37 3.32
481 484 2.648059 AGAAACTGAAGCAGCTTGTGT 58.352 42.857 13.91 8.09 34.37 3.72
482 485 3.065786 TGAAGAAACTGAAGCAGCTTGTG 59.934 43.478 13.91 7.40 34.37 3.33
483 486 3.282021 TGAAGAAACTGAAGCAGCTTGT 58.718 40.909 13.91 1.76 34.37 3.16
484 487 3.976793 TGAAGAAACTGAAGCAGCTTG 57.023 42.857 13.91 1.01 34.37 4.01
485 488 6.830873 ATTATGAAGAAACTGAAGCAGCTT 57.169 33.333 7.60 7.60 34.37 3.74
486 489 6.432162 TCAATTATGAAGAAACTGAAGCAGCT 59.568 34.615 0.00 0.00 31.09 4.24
487 490 6.615088 TCAATTATGAAGAAACTGAAGCAGC 58.385 36.000 0.00 0.00 31.09 5.25
501 504 8.402798 TCTTTGGTAACTGCTTCAATTATGAA 57.597 30.769 0.00 0.00 39.62 2.57
502 505 7.994425 TCTTTGGTAACTGCTTCAATTATGA 57.006 32.000 0.00 0.00 37.61 2.15
503 506 9.643693 ATTTCTTTGGTAACTGCTTCAATTATG 57.356 29.630 0.00 0.00 37.61 1.90
506 509 8.860088 AGTATTTCTTTGGTAACTGCTTCAATT 58.140 29.630 0.00 0.00 37.61 2.32
507 510 8.299570 CAGTATTTCTTTGGTAACTGCTTCAAT 58.700 33.333 0.00 0.00 37.61 2.57
508 511 7.284489 ACAGTATTTCTTTGGTAACTGCTTCAA 59.716 33.333 0.00 0.00 38.27 2.69
509 512 6.770785 ACAGTATTTCTTTGGTAACTGCTTCA 59.229 34.615 0.00 0.00 38.27 3.02
510 513 7.041372 TGACAGTATTTCTTTGGTAACTGCTTC 60.041 37.037 0.00 0.00 38.27 3.86
511 514 6.770785 TGACAGTATTTCTTTGGTAACTGCTT 59.229 34.615 0.00 0.00 38.27 3.91
512 515 6.296026 TGACAGTATTTCTTTGGTAACTGCT 58.704 36.000 0.00 0.00 38.27 4.24
513 516 6.554334 TGACAGTATTTCTTTGGTAACTGC 57.446 37.500 0.00 0.00 38.27 4.40
514 517 8.402472 TGTTTGACAGTATTTCTTTGGTAACTG 58.598 33.333 0.00 0.00 40.08 3.16
515 518 8.514330 TGTTTGACAGTATTTCTTTGGTAACT 57.486 30.769 0.00 0.00 37.61 2.24
516 519 9.575783 TTTGTTTGACAGTATTTCTTTGGTAAC 57.424 29.630 0.00 0.00 0.00 2.50
518 521 9.959749 GATTTGTTTGACAGTATTTCTTTGGTA 57.040 29.630 0.00 0.00 0.00 3.25
519 522 8.474025 TGATTTGTTTGACAGTATTTCTTTGGT 58.526 29.630 0.00 0.00 0.00 3.67
520 523 8.755018 GTGATTTGTTTGACAGTATTTCTTTGG 58.245 33.333 0.00 0.00 0.00 3.28
540 543 6.923199 ATTTGATGGTTTCTCCTGTGATTT 57.077 33.333 0.00 0.00 37.07 2.17
541 544 8.306761 GTTTATTTGATGGTTTCTCCTGTGATT 58.693 33.333 0.00 0.00 37.07 2.57
542 545 7.451255 TGTTTATTTGATGGTTTCTCCTGTGAT 59.549 33.333 0.00 0.00 37.07 3.06
543 546 6.775142 TGTTTATTTGATGGTTTCTCCTGTGA 59.225 34.615 0.00 0.00 37.07 3.58
544 547 6.980593 TGTTTATTTGATGGTTTCTCCTGTG 58.019 36.000 0.00 0.00 37.07 3.66
545 548 7.595819 TTGTTTATTTGATGGTTTCTCCTGT 57.404 32.000 0.00 0.00 37.07 4.00
546 549 8.359642 TCTTTGTTTATTTGATGGTTTCTCCTG 58.640 33.333 0.00 0.00 37.07 3.86
547 550 8.477419 TCTTTGTTTATTTGATGGTTTCTCCT 57.523 30.769 0.00 0.00 37.07 3.69
548 551 9.541143 TTTCTTTGTTTATTTGATGGTTTCTCC 57.459 29.630 0.00 0.00 0.00 3.71
598 602 8.347004 TGCATTAGAGTTTTCATTTGATGGTA 57.653 30.769 0.00 0.00 0.00 3.25
608 612 9.979578 AACAACAATAATGCATTAGAGTTTTCA 57.020 25.926 25.04 6.03 0.00 2.69
619 623 9.369904 GGACTTGAATTAACAACAATAATGCAT 57.630 29.630 0.00 0.00 30.29 3.96
626 630 8.641541 ACTCAATGGACTTGAATTAACAACAAT 58.358 29.630 0.00 0.00 43.20 2.71
627 631 7.920151 CACTCAATGGACTTGAATTAACAACAA 59.080 33.333 0.00 0.00 43.20 2.83
628 632 7.424803 CACTCAATGGACTTGAATTAACAACA 58.575 34.615 0.00 0.00 43.20 3.33
629 633 6.363357 GCACTCAATGGACTTGAATTAACAAC 59.637 38.462 0.00 0.00 43.20 3.32
630 634 6.040278 TGCACTCAATGGACTTGAATTAACAA 59.960 34.615 0.00 0.00 43.20 2.83
637 641 5.316167 ACTTATGCACTCAATGGACTTGAA 58.684 37.500 0.00 0.00 43.20 2.69
649 653 1.654105 CCGTCGACAACTTATGCACTC 59.346 52.381 17.16 0.00 0.00 3.51
657 661 2.413837 CCAATTCTCCGTCGACAACTT 58.586 47.619 17.16 0.00 0.00 2.66
664 668 2.380084 TCTTTCCCAATTCTCCGTCG 57.620 50.000 0.00 0.00 0.00 5.12
677 684 2.150397 ACGCCTACGCATATCTTTCC 57.850 50.000 0.00 0.00 45.53 3.13
700 707 8.506168 TTGTTCTTAGAAAGCAATACCTATGG 57.494 34.615 0.00 0.00 0.00 2.74
704 711 8.635765 TGAATTGTTCTTAGAAAGCAATACCT 57.364 30.769 10.02 0.00 0.00 3.08
723 730 4.834357 TGGAGAACACACACATGAATTG 57.166 40.909 0.00 0.00 0.00 2.32
736 743 1.001974 CCGTCATTCCTGTGGAGAACA 59.998 52.381 0.00 0.00 37.22 3.18
737 744 1.275291 TCCGTCATTCCTGTGGAGAAC 59.725 52.381 0.00 0.00 31.21 3.01
740 747 1.550524 TCTTCCGTCATTCCTGTGGAG 59.449 52.381 0.00 0.00 32.34 3.86
754 761 5.988561 CCATCTCTTCCTCTATTTTCTTCCG 59.011 44.000 0.00 0.00 0.00 4.30
756 763 5.465056 CGCCATCTCTTCCTCTATTTTCTTC 59.535 44.000 0.00 0.00 0.00 2.87
810 1114 0.178964 AACCCTTTTGGCAGCTGCTA 60.179 50.000 35.82 29.61 41.70 3.49
812 1116 0.601046 GAAACCCTTTTGGCAGCTGC 60.601 55.000 30.88 30.88 37.83 5.25
858 5616 0.323816 TGAGTGTCGCCATCTCTCCT 60.324 55.000 0.00 0.00 0.00 3.69
876 5638 3.875727 CTGCTGGTGGATGACTATTCTTG 59.124 47.826 0.00 0.00 0.00 3.02
892 5662 0.250640 AGTTGAGTGGAAGCTGCTGG 60.251 55.000 1.35 0.00 0.00 4.85
978 5859 1.533625 TGTGTTTGGCTAGGTGATGC 58.466 50.000 0.00 0.00 0.00 3.91
1615 6513 5.250774 ACATTGTTAGGTTACCCAGAGATGT 59.749 40.000 0.00 1.29 0.00 3.06
1681 6966 2.682269 GCCTTCCAATCTCCTCAGGAAC 60.682 54.545 0.00 0.00 35.35 3.62
1868 7153 6.808212 ACCTGAAAAATCATTTACATGAAGCG 59.192 34.615 0.00 0.00 42.93 4.68
2058 7631 4.081420 AGGTTAGTGAGCATAGTGAGGTTG 60.081 45.833 0.00 0.00 0.00 3.77
2088 7661 3.554129 GGCCTGTGATTTGGTTTTGGTAC 60.554 47.826 0.00 0.00 0.00 3.34
2208 8141 3.321396 GGGATAGTGCTACTAGGTTGGTC 59.679 52.174 0.00 0.00 33.66 4.02
2235 8312 6.204882 GGATGGAACCGTTTATCTGATTTAGG 59.795 42.308 0.00 0.00 0.00 2.69
2249 8326 0.328258 CTCTTTGGGGATGGAACCGT 59.672 55.000 0.00 0.00 0.00 4.83
2277 8499 5.278169 CCACAGAGTTTTGAGTTTCATCAGG 60.278 44.000 0.00 0.00 0.00 3.86
2286 8508 2.722094 TGCAACCACAGAGTTTTGAGT 58.278 42.857 0.00 0.00 0.00 3.41
2310 8532 5.604650 TGGTATTGGTCCTGAAATTTGGTTT 59.395 36.000 0.00 0.00 0.00 3.27
2381 8603 9.103861 GAGGAAGAGAACCTGATAATTTGTTAG 57.896 37.037 0.00 0.00 37.93 2.34
2421 8643 4.755123 ACGAGATTAACAAGGTTTGTGAGG 59.245 41.667 0.00 0.00 44.59 3.86
2442 8664 6.482835 TGAAAGTGAGTTGTTTGTTATCACG 58.517 36.000 0.00 0.00 43.87 4.35
2444 8666 6.826231 TCCTGAAAGTGAGTTGTTTGTTATCA 59.174 34.615 0.00 0.00 0.00 2.15
2451 8673 4.236527 AGGTCCTGAAAGTGAGTTGTTT 57.763 40.909 0.00 0.00 0.00 2.83
2509 8731 6.978338 ACATATTCAATGCAACATGGAGATC 58.022 36.000 0.00 0.00 0.00 2.75
2525 8747 3.395054 TGGGGCCATTGAACATATTCA 57.605 42.857 4.39 0.00 43.28 2.57
2526 8748 4.262592 GGAATGGGGCCATTGAACATATTC 60.263 45.833 4.39 0.63 45.50 1.75
2582 8804 4.747540 TGGTTCGACTGAATGTCAATTG 57.252 40.909 0.00 0.00 45.60 2.32
2644 8866 3.894759 CCAGGTTCATCCATGTGAGATT 58.105 45.455 0.00 0.00 39.02 2.40
2662 8884 3.819337 CCAGTGATTCTATTGGATGCCAG 59.181 47.826 0.00 0.00 33.81 4.85
2706 8928 2.472029 ACTTGTAGCTGGGTAGATGCT 58.528 47.619 0.00 0.00 40.43 3.79
2733 8959 6.590068 ACCCATGATCATATTATCTGCTAGC 58.410 40.000 8.15 8.10 0.00 3.42
2941 9168 9.258826 CAGTCTGTTCCAAGATATATCAAGAAG 57.741 37.037 15.08 4.40 0.00 2.85
3091 9319 4.446371 AGGTTATTGCTGCTCACATCTAC 58.554 43.478 0.00 0.00 0.00 2.59
3163 9391 9.438163 ACCAAACTGATTATGGGATAAATTCAT 57.562 29.630 0.00 0.00 38.58 2.57
3339 9573 3.055747 TGACCCGTACAAGTGAATATGCA 60.056 43.478 0.00 0.00 0.00 3.96
3355 9589 5.960113 TGATCCAATAAACAATTTGACCCG 58.040 37.500 2.79 0.00 0.00 5.28
3443 9681 2.728690 TACGCACCAGACGTTATTGT 57.271 45.000 0.00 0.00 41.93 2.71
3522 9761 1.687563 ACACACCTTGCTTTGTACCC 58.312 50.000 0.00 0.00 0.00 3.69
3851 10126 3.181486 TGTGTGTGTGTTTGTGTGTTTGT 60.181 39.130 0.00 0.00 0.00 2.83
3854 10129 2.359214 TGTGTGTGTGTGTTTGTGTGTT 59.641 40.909 0.00 0.00 0.00 3.32
3862 10137 1.265635 GTGTGTGTGTGTGTGTGTGTT 59.734 47.619 0.00 0.00 0.00 3.32
4058 11531 6.128729 CCGCAAAAATGAAATGAACAAAGAC 58.871 36.000 0.00 0.00 0.00 3.01
4073 11546 0.737019 CCGCAAGATGCCGCAAAAAT 60.737 50.000 0.00 0.00 41.12 1.82
4125 11598 4.332819 CCGTCCTAGATCAAACAATGGAAC 59.667 45.833 0.00 0.00 0.00 3.62
4126 11599 4.513442 CCGTCCTAGATCAAACAATGGAA 58.487 43.478 0.00 0.00 0.00 3.53
4127 11600 3.681594 GCCGTCCTAGATCAAACAATGGA 60.682 47.826 0.00 0.00 0.00 3.41
4128 11601 2.614057 GCCGTCCTAGATCAAACAATGG 59.386 50.000 0.00 0.00 0.00 3.16
4129 11602 2.285220 CGCCGTCCTAGATCAAACAATG 59.715 50.000 0.00 0.00 0.00 2.82
4130 11603 2.093658 ACGCCGTCCTAGATCAAACAAT 60.094 45.455 0.00 0.00 0.00 2.71
4131 11604 1.274167 ACGCCGTCCTAGATCAAACAA 59.726 47.619 0.00 0.00 0.00 2.83
4132 11605 0.892755 ACGCCGTCCTAGATCAAACA 59.107 50.000 0.00 0.00 0.00 2.83
4133 11606 1.557651 GACGCCGTCCTAGATCAAAC 58.442 55.000 5.81 0.00 0.00 2.93
4148 11621 3.537874 ATGTAGAGCCCCGGACGC 61.538 66.667 0.73 3.67 0.00 5.19
4149 11622 2.417516 CATGTAGAGCCCCGGACG 59.582 66.667 0.73 0.00 0.00 4.79
4150 11623 2.822399 CCATGTAGAGCCCCGGAC 59.178 66.667 0.73 0.00 0.00 4.79
4151 11624 3.161450 GCCATGTAGAGCCCCGGA 61.161 66.667 0.73 0.00 0.00 5.14
4152 11625 4.609018 CGCCATGTAGAGCCCCGG 62.609 72.222 0.00 0.00 0.00 5.73
4153 11626 2.771763 GATCGCCATGTAGAGCCCCG 62.772 65.000 0.00 0.00 0.00 5.73
4154 11627 1.004440 GATCGCCATGTAGAGCCCC 60.004 63.158 0.00 0.00 0.00 5.80
4155 11628 1.004440 GGATCGCCATGTAGAGCCC 60.004 63.158 9.92 3.03 36.98 5.19
4156 11629 0.106708 TTGGATCGCCATGTAGAGCC 59.893 55.000 13.14 13.14 45.46 4.70
4157 11630 2.072298 GATTGGATCGCCATGTAGAGC 58.928 52.381 0.00 0.00 45.46 4.09
4158 11631 2.332104 CGATTGGATCGCCATGTAGAG 58.668 52.381 0.00 0.00 46.55 2.43
4159 11632 2.438868 CGATTGGATCGCCATGTAGA 57.561 50.000 0.00 0.00 46.55 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.