Multiple sequence alignment - TraesCS1B01G007600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G007600 chr1B 100.000 3280 0 0 1 3280 4218910 4222189 0.000000e+00 6058.0
1 TraesCS1B01G007600 chr1D 89.529 2779 144 72 533 3280 509296 511958 0.000000e+00 3384.0
2 TraesCS1B01G007600 chr1A 84.744 2812 204 79 544 3275 3116764 3119430 0.000000e+00 2608.0
3 TraesCS1B01G007600 chr1A 90.769 65 0 4 4 65 368812569 368812508 7.540000e-12 82.4
4 TraesCS1B01G007600 chr2A 87.316 678 43 22 982 1621 174025401 174024729 0.000000e+00 736.0
5 TraesCS1B01G007600 chr2A 91.304 46 1 2 17 62 706998140 706998098 3.530000e-05 60.2
6 TraesCS1B01G007600 chr6A 87.021 678 45 22 982 1621 531810051 531810723 0.000000e+00 725.0
7 TraesCS1B01G007600 chr4A 86.795 674 48 18 982 1621 130525325 130525991 0.000000e+00 713.0
8 TraesCS1B01G007600 chr7B 90.444 450 30 8 1964 2409 600816223 600815783 6.100000e-162 580.0
9 TraesCS1B01G007600 chr7B 90.909 330 20 6 2358 2679 637934027 637933700 5.030000e-118 435.0
10 TraesCS1B01G007600 chr7B 86.228 167 21 2 377 542 490207986 490208151 2.600000e-41 180.0
11 TraesCS1B01G007600 chr7B 100.000 39 0 0 2811 2849 637932987 637932949 4.540000e-09 73.1
12 TraesCS1B01G007600 chr2B 90.222 450 31 7 1964 2409 692992108 692992548 2.840000e-160 575.0
13 TraesCS1B01G007600 chr3B 90.200 449 31 7 1965 2409 557930182 557930621 1.020000e-159 573.0
14 TraesCS1B01G007600 chr3B 90.337 445 30 7 1969 2409 43972201 43972636 3.670000e-159 571.0
15 TraesCS1B01G007600 chr3B 90.000 450 32 7 1964 2409 44082694 44083134 1.320000e-158 569.0
16 TraesCS1B01G007600 chr3B 90.135 446 29 9 1968 2409 82507952 82507518 1.710000e-157 566.0
17 TraesCS1B01G007600 chr3B 90.476 357 24 6 2331 2679 782533261 782532907 2.310000e-126 462.0
18 TraesCS1B01G007600 chr3B 85.799 169 23 1 377 545 489979022 489979189 9.350000e-41 178.0
19 TraesCS1B01G007600 chr3B 97.436 39 1 0 2811 2849 782532194 782532156 2.110000e-07 67.6
20 TraesCS1B01G007600 chr3B 100.000 30 0 0 635 664 8802223 8802194 4.570000e-04 56.5
21 TraesCS1B01G007600 chr6B 90.000 450 32 7 1964 2409 387961427 387960987 1.320000e-158 569.0
22 TraesCS1B01G007600 chr6B 90.756 357 23 6 2331 2679 700077913 700078267 4.960000e-128 468.0
23 TraesCS1B01G007600 chr6B 84.211 171 26 1 373 543 585526849 585527018 7.280000e-37 165.0
24 TraesCS1B01G007600 chr5B 90.000 450 32 7 1964 2409 58980002 58979562 1.320000e-158 569.0
25 TraesCS1B01G007600 chr5B 90.511 137 3 9 1088 1215 480409932 480410067 4.350000e-39 172.0
26 TraesCS1B01G007600 chr2D 94.059 202 10 2 2331 2532 60275290 60275489 4.110000e-79 305.0
27 TraesCS1B01G007600 chr2D 93.269 208 12 2 2331 2538 525670292 525670087 4.110000e-79 305.0
28 TraesCS1B01G007600 chr2D 85.714 175 23 2 380 554 318563894 318563722 2.010000e-42 183.0
29 TraesCS1B01G007600 chr2D 100.000 39 0 0 2811 2849 525669603 525669565 4.540000e-09 73.1
30 TraesCS1B01G007600 chr2D 96.875 32 0 1 110 140 611164341 611164372 6.000000e-03 52.8
31 TraesCS1B01G007600 chr4B 92.788 208 13 2 2331 2538 277740523 277740318 1.910000e-77 300.0
32 TraesCS1B01G007600 chr4B 89.062 64 1 1 2786 2849 277739854 277739797 1.260000e-09 75.0
33 TraesCS1B01G007600 chr5D 93.069 202 11 2 2331 2532 438252993 438253191 3.200000e-75 292.0
34 TraesCS1B01G007600 chr5D 100.000 39 0 0 2811 2849 438253681 438253719 4.540000e-09 73.1
35 TraesCS1B01G007600 chr7A 81.266 395 31 19 984 1340 703520838 703520449 2.490000e-71 279.0
36 TraesCS1B01G007600 chr7A 92.350 183 5 6 1088 1261 268850182 268850000 5.430000e-63 252.0
37 TraesCS1B01G007600 chr7A 85.890 163 22 1 380 542 474509067 474509228 4.350000e-39 172.0
38 TraesCS1B01G007600 chr7D 86.792 159 20 1 379 537 31886053 31886210 3.360000e-40 176.0
39 TraesCS1B01G007600 chr7D 85.207 169 21 3 377 542 465477779 465477946 1.560000e-38 171.0
40 TraesCS1B01G007600 chr6D 85.542 166 23 1 377 542 27451724 27451560 4.350000e-39 172.0
41 TraesCS1B01G007600 chr5A 90.511 137 3 8 1088 1215 664782985 664783120 4.350000e-39 172.0
42 TraesCS1B01G007600 chr3D 85.276 163 22 2 380 542 442813072 442812912 2.020000e-37 167.0
43 TraesCS1B01G007600 chr3D 86.667 60 2 4 4 61 430152075 430152020 9.830000e-06 62.1
44 TraesCS1B01G007600 chrUn 92.035 113 9 0 3162 3274 219611454 219611566 3.390000e-35 159.0
45 TraesCS1B01G007600 chrUn 92.035 113 9 0 3162 3274 278033104 278033216 3.390000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G007600 chr1B 4218910 4222189 3279 False 6058.00 6058 100.0000 1 3280 1 chr1B.!!$F1 3279
1 TraesCS1B01G007600 chr1D 509296 511958 2662 False 3384.00 3384 89.5290 533 3280 1 chr1D.!!$F1 2747
2 TraesCS1B01G007600 chr1A 3116764 3119430 2666 False 2608.00 2608 84.7440 544 3275 1 chr1A.!!$F1 2731
3 TraesCS1B01G007600 chr2A 174024729 174025401 672 True 736.00 736 87.3160 982 1621 1 chr2A.!!$R1 639
4 TraesCS1B01G007600 chr6A 531810051 531810723 672 False 725.00 725 87.0210 982 1621 1 chr6A.!!$F1 639
5 TraesCS1B01G007600 chr4A 130525325 130525991 666 False 713.00 713 86.7950 982 1621 1 chr4A.!!$F1 639
6 TraesCS1B01G007600 chr7B 637932949 637934027 1078 True 254.05 435 95.4545 2358 2849 2 chr7B.!!$R2 491
7 TraesCS1B01G007600 chr3B 782532156 782533261 1105 True 264.80 462 93.9560 2331 2849 2 chr3B.!!$R3 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.036388 ACATACCCAGCTTCACACCG 60.036 55.0 0.0 0.0 0.0 4.94 F
80 81 0.036388 CATACCCAGCTTCACACCGT 60.036 55.0 0.0 0.0 0.0 4.83 F
1727 1809 0.179097 GACTCCTGCTAAGCCCGAAG 60.179 60.0 0.0 0.0 0.0 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 1805 0.098025 ACGTGTTGTTGTTGCCTTCG 59.902 50.0 0.0 0.0 0.00 3.79 R
1849 1931 0.318699 TGCTCGTCTTCACGTTCTGG 60.319 55.0 0.0 0.0 46.76 3.86 R
2996 3713 0.816018 GCTGATGCTGATGCTGCTCT 60.816 55.0 0.0 0.0 40.48 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 9.784680 TTTATTAAACTGCAAAAACGTCTTACA 57.215 25.926 0.00 0.00 0.00 2.41
39 40 9.953697 TTATTAAACTGCAAAAACGTCTTACAT 57.046 25.926 0.00 0.00 0.00 2.29
40 41 8.865590 ATTAAACTGCAAAAACGTCTTACATT 57.134 26.923 0.00 0.00 0.00 2.71
41 42 8.690680 TTAAACTGCAAAAACGTCTTACATTT 57.309 26.923 0.00 0.00 0.00 2.32
42 43 6.567769 AACTGCAAAAACGTCTTACATTTG 57.432 33.333 0.00 0.00 34.84 2.32
43 44 5.646606 ACTGCAAAAACGTCTTACATTTGT 58.353 33.333 0.00 0.00 34.37 2.83
44 45 5.514914 ACTGCAAAAACGTCTTACATTTGTG 59.485 36.000 0.00 0.00 34.37 3.33
45 46 5.403246 TGCAAAAACGTCTTACATTTGTGT 58.597 33.333 0.00 0.00 34.37 3.72
46 47 6.552629 TGCAAAAACGTCTTACATTTGTGTA 58.447 32.000 0.00 0.00 34.37 2.90
47 48 6.469595 TGCAAAAACGTCTTACATTTGTGTAC 59.530 34.615 0.00 0.00 34.37 2.90
48 49 6.075257 GCAAAAACGTCTTACATTTGTGTACC 60.075 38.462 0.00 0.00 34.37 3.34
49 50 6.930667 AAAACGTCTTACATTTGTGTACCT 57.069 33.333 0.00 0.00 0.00 3.08
50 51 8.336806 CAAAAACGTCTTACATTTGTGTACCTA 58.663 33.333 0.00 0.00 0.00 3.08
51 52 7.647907 AAACGTCTTACATTTGTGTACCTAG 57.352 36.000 0.00 0.00 0.00 3.02
52 53 6.579666 ACGTCTTACATTTGTGTACCTAGA 57.420 37.500 0.00 0.00 0.00 2.43
53 54 6.618811 ACGTCTTACATTTGTGTACCTAGAG 58.381 40.000 0.00 0.00 0.00 2.43
54 55 6.034591 CGTCTTACATTTGTGTACCTAGAGG 58.965 44.000 0.00 0.00 42.17 3.69
55 56 6.338937 GTCTTACATTTGTGTACCTAGAGGG 58.661 44.000 0.00 0.00 40.27 4.30
76 77 4.730949 GTAGTACATACCCAGCTTCACA 57.269 45.455 0.00 0.00 0.00 3.58
77 78 3.611766 AGTACATACCCAGCTTCACAC 57.388 47.619 0.00 0.00 0.00 3.82
78 79 2.236395 AGTACATACCCAGCTTCACACC 59.764 50.000 0.00 0.00 0.00 4.16
79 80 0.036388 ACATACCCAGCTTCACACCG 60.036 55.000 0.00 0.00 0.00 4.94
80 81 0.036388 CATACCCAGCTTCACACCGT 60.036 55.000 0.00 0.00 0.00 4.83
81 82 0.690762 ATACCCAGCTTCACACCGTT 59.309 50.000 0.00 0.00 0.00 4.44
82 83 0.250124 TACCCAGCTTCACACCGTTG 60.250 55.000 0.00 0.00 0.00 4.10
83 84 2.639286 CCAGCTTCACACCGTTGC 59.361 61.111 0.00 0.00 0.00 4.17
84 85 2.186160 CCAGCTTCACACCGTTGCA 61.186 57.895 0.00 0.00 0.00 4.08
85 86 1.518056 CCAGCTTCACACCGTTGCAT 61.518 55.000 0.00 0.00 0.00 3.96
86 87 0.311790 CAGCTTCACACCGTTGCATT 59.688 50.000 0.00 0.00 0.00 3.56
87 88 1.535028 CAGCTTCACACCGTTGCATTA 59.465 47.619 0.00 0.00 0.00 1.90
88 89 2.162208 CAGCTTCACACCGTTGCATTAT 59.838 45.455 0.00 0.00 0.00 1.28
89 90 2.819608 AGCTTCACACCGTTGCATTATT 59.180 40.909 0.00 0.00 0.00 1.40
90 91 3.255642 AGCTTCACACCGTTGCATTATTT 59.744 39.130 0.00 0.00 0.00 1.40
91 92 3.987220 GCTTCACACCGTTGCATTATTTT 59.013 39.130 0.00 0.00 0.00 1.82
92 93 4.447389 GCTTCACACCGTTGCATTATTTTT 59.553 37.500 0.00 0.00 0.00 1.94
140 141 9.995003 AACTTCCTATCTATTCATCTTCATCAC 57.005 33.333 0.00 0.00 0.00 3.06
141 142 9.152327 ACTTCCTATCTATTCATCTTCATCACA 57.848 33.333 0.00 0.00 0.00 3.58
142 143 9.421806 CTTCCTATCTATTCATCTTCATCACAC 57.578 37.037 0.00 0.00 0.00 3.82
143 144 7.901029 TCCTATCTATTCATCTTCATCACACC 58.099 38.462 0.00 0.00 0.00 4.16
144 145 7.510343 TCCTATCTATTCATCTTCATCACACCA 59.490 37.037 0.00 0.00 0.00 4.17
145 146 8.319881 CCTATCTATTCATCTTCATCACACCAT 58.680 37.037 0.00 0.00 0.00 3.55
146 147 9.722184 CTATCTATTCATCTTCATCACACCATT 57.278 33.333 0.00 0.00 0.00 3.16
147 148 7.797038 TCTATTCATCTTCATCACACCATTG 57.203 36.000 0.00 0.00 0.00 2.82
148 149 4.707030 TTCATCTTCATCACACCATTGC 57.293 40.909 0.00 0.00 0.00 3.56
149 150 3.688235 TCATCTTCATCACACCATTGCA 58.312 40.909 0.00 0.00 0.00 4.08
150 151 4.274978 TCATCTTCATCACACCATTGCAT 58.725 39.130 0.00 0.00 0.00 3.96
151 152 5.438833 TCATCTTCATCACACCATTGCATA 58.561 37.500 0.00 0.00 0.00 3.14
152 153 6.066032 TCATCTTCATCACACCATTGCATAT 58.934 36.000 0.00 0.00 0.00 1.78
153 154 6.548251 TCATCTTCATCACACCATTGCATATT 59.452 34.615 0.00 0.00 0.00 1.28
154 155 6.778834 TCTTCATCACACCATTGCATATTT 57.221 33.333 0.00 0.00 0.00 1.40
155 156 6.798482 TCTTCATCACACCATTGCATATTTC 58.202 36.000 0.00 0.00 0.00 2.17
156 157 5.172460 TCATCACACCATTGCATATTTCG 57.828 39.130 0.00 0.00 0.00 3.46
157 158 4.639755 TCATCACACCATTGCATATTTCGT 59.360 37.500 0.00 0.00 0.00 3.85
158 159 4.354071 TCACACCATTGCATATTTCGTG 57.646 40.909 0.00 0.00 0.00 4.35
159 160 3.755905 TCACACCATTGCATATTTCGTGT 59.244 39.130 0.00 0.00 33.46 4.49
160 161 4.938226 TCACACCATTGCATATTTCGTGTA 59.062 37.500 0.00 0.00 32.08 2.90
161 162 5.064579 TCACACCATTGCATATTTCGTGTAG 59.935 40.000 0.00 0.00 32.08 2.74
162 163 4.335315 ACACCATTGCATATTTCGTGTAGG 59.665 41.667 0.00 0.00 31.57 3.18
163 164 4.574421 CACCATTGCATATTTCGTGTAGGA 59.426 41.667 0.00 0.00 0.00 2.94
164 165 5.065859 CACCATTGCATATTTCGTGTAGGAA 59.934 40.000 0.00 0.00 0.00 3.36
165 166 5.650266 ACCATTGCATATTTCGTGTAGGAAA 59.350 36.000 2.68 2.68 39.96 3.13
166 167 6.151985 ACCATTGCATATTTCGTGTAGGAAAA 59.848 34.615 4.16 0.00 39.19 2.29
167 168 7.032580 CCATTGCATATTTCGTGTAGGAAAAA 58.967 34.615 4.16 0.00 39.19 1.94
168 169 7.706179 CCATTGCATATTTCGTGTAGGAAAAAT 59.294 33.333 4.16 0.00 39.19 1.82
169 170 8.745837 CATTGCATATTTCGTGTAGGAAAAATC 58.254 33.333 4.16 0.00 39.19 2.17
170 171 7.384439 TGCATATTTCGTGTAGGAAAAATCA 57.616 32.000 4.16 0.00 39.19 2.57
171 172 7.821652 TGCATATTTCGTGTAGGAAAAATCAA 58.178 30.769 4.16 0.00 39.19 2.57
172 173 8.300286 TGCATATTTCGTGTAGGAAAAATCAAA 58.700 29.630 4.16 0.00 39.19 2.69
173 174 8.798153 GCATATTTCGTGTAGGAAAAATCAAAG 58.202 33.333 4.16 0.00 39.19 2.77
174 175 9.289303 CATATTTCGTGTAGGAAAAATCAAAGG 57.711 33.333 4.16 0.00 39.19 3.11
175 176 4.759516 TCGTGTAGGAAAAATCAAAGGC 57.240 40.909 0.00 0.00 0.00 4.35
176 177 3.504520 TCGTGTAGGAAAAATCAAAGGCC 59.495 43.478 0.00 0.00 0.00 5.19
177 178 3.254657 CGTGTAGGAAAAATCAAAGGCCA 59.745 43.478 5.01 0.00 0.00 5.36
178 179 4.615912 CGTGTAGGAAAAATCAAAGGCCAG 60.616 45.833 5.01 0.00 0.00 4.85
179 180 3.258123 TGTAGGAAAAATCAAAGGCCAGC 59.742 43.478 5.01 0.00 0.00 4.85
180 181 2.328319 AGGAAAAATCAAAGGCCAGCA 58.672 42.857 5.01 0.00 0.00 4.41
181 182 2.705127 AGGAAAAATCAAAGGCCAGCAA 59.295 40.909 5.01 0.00 0.00 3.91
182 183 3.069289 GGAAAAATCAAAGGCCAGCAAG 58.931 45.455 5.01 0.00 0.00 4.01
183 184 2.845363 AAAATCAAAGGCCAGCAAGG 57.155 45.000 5.01 0.00 41.84 3.61
201 202 3.326210 CGCGCTGCTCGAAGGATC 61.326 66.667 6.08 0.00 41.67 3.36
202 203 2.202797 GCGCTGCTCGAAGGATCA 60.203 61.111 0.00 0.00 41.67 2.92
203 204 1.593750 GCGCTGCTCGAAGGATCAT 60.594 57.895 0.00 0.00 41.67 2.45
204 205 1.829349 GCGCTGCTCGAAGGATCATG 61.829 60.000 0.00 0.00 41.67 3.07
205 206 0.249197 CGCTGCTCGAAGGATCATGA 60.249 55.000 0.00 0.00 41.67 3.07
206 207 1.803998 CGCTGCTCGAAGGATCATGAA 60.804 52.381 0.00 0.00 41.67 2.57
207 208 2.283298 GCTGCTCGAAGGATCATGAAA 58.717 47.619 0.00 0.00 0.00 2.69
208 209 2.679837 GCTGCTCGAAGGATCATGAAAA 59.320 45.455 0.00 0.00 0.00 2.29
209 210 3.127548 GCTGCTCGAAGGATCATGAAAAA 59.872 43.478 0.00 0.00 0.00 1.94
255 256 9.743057 TTTTTGTTTACCTTTCTGACATATGTG 57.257 29.630 14.43 0.00 0.00 3.21
256 257 8.458573 TTTGTTTACCTTTCTGACATATGTGT 57.541 30.769 14.43 5.54 42.49 3.72
257 258 9.562408 TTTGTTTACCTTTCTGACATATGTGTA 57.438 29.630 14.43 4.51 39.09 2.90
258 259 8.771920 TGTTTACCTTTCTGACATATGTGTAG 57.228 34.615 14.43 11.35 39.09 2.74
259 260 7.333423 TGTTTACCTTTCTGACATATGTGTAGC 59.667 37.037 14.43 0.00 39.09 3.58
260 261 5.420725 ACCTTTCTGACATATGTGTAGCA 57.579 39.130 14.43 3.88 39.09 3.49
261 262 5.178797 ACCTTTCTGACATATGTGTAGCAC 58.821 41.667 14.43 0.00 39.09 4.40
274 275 2.992593 TGTAGCACACAACAAGGTTCA 58.007 42.857 0.00 0.00 32.95 3.18
275 276 3.348119 TGTAGCACACAACAAGGTTCAA 58.652 40.909 0.00 0.00 32.95 2.69
276 277 3.759086 TGTAGCACACAACAAGGTTCAAA 59.241 39.130 0.00 0.00 32.95 2.69
277 278 3.951775 AGCACACAACAAGGTTCAAAA 57.048 38.095 0.00 0.00 0.00 2.44
278 279 4.470334 AGCACACAACAAGGTTCAAAAT 57.530 36.364 0.00 0.00 0.00 1.82
279 280 4.831107 AGCACACAACAAGGTTCAAAATT 58.169 34.783 0.00 0.00 0.00 1.82
280 281 5.244755 AGCACACAACAAGGTTCAAAATTT 58.755 33.333 0.00 0.00 0.00 1.82
281 282 5.704978 AGCACACAACAAGGTTCAAAATTTT 59.295 32.000 0.00 0.00 0.00 1.82
282 283 5.794448 GCACACAACAAGGTTCAAAATTTTG 59.206 36.000 22.40 22.40 39.48 2.44
283 284 6.313252 CACACAACAAGGTTCAAAATTTTGG 58.687 36.000 26.45 14.10 38.66 3.28
284 285 6.000840 ACACAACAAGGTTCAAAATTTTGGT 58.999 32.000 26.45 14.67 38.66 3.67
285 286 7.118390 CACACAACAAGGTTCAAAATTTTGGTA 59.882 33.333 26.45 14.67 38.66 3.25
286 287 7.661847 ACACAACAAGGTTCAAAATTTTGGTAA 59.338 29.630 26.45 14.32 38.66 2.85
287 288 7.960195 CACAACAAGGTTCAAAATTTTGGTAAC 59.040 33.333 26.45 22.68 38.66 2.50
313 314 4.035017 CGCATTTCGTACATGGAAATTCC 58.965 43.478 4.79 4.79 40.99 3.01
314 315 4.035017 GCATTTCGTACATGGAAATTCCG 58.965 43.478 7.60 0.00 40.99 4.30
315 316 4.597079 CATTTCGTACATGGAAATTCCGG 58.403 43.478 7.60 0.00 40.99 5.14
316 317 1.658994 TCGTACATGGAAATTCCGGC 58.341 50.000 7.60 0.00 40.17 6.13
317 318 1.066071 TCGTACATGGAAATTCCGGCA 60.066 47.619 7.60 0.00 40.17 5.69
318 319 1.063469 CGTACATGGAAATTCCGGCAC 59.937 52.381 7.60 2.54 40.17 5.01
319 320 1.404035 GTACATGGAAATTCCGGCACC 59.596 52.381 7.60 0.00 40.17 5.01
320 321 0.970427 ACATGGAAATTCCGGCACCC 60.970 55.000 7.60 0.00 40.17 4.61
321 322 0.969917 CATGGAAATTCCGGCACCCA 60.970 55.000 7.60 0.00 40.17 4.51
322 323 0.970427 ATGGAAATTCCGGCACCCAC 60.970 55.000 7.60 0.00 40.17 4.61
323 324 2.348104 GGAAATTCCGGCACCCACC 61.348 63.158 0.00 0.00 0.00 4.61
331 332 4.740822 GGCACCCACCGAAGCCAT 62.741 66.667 0.00 0.00 46.26 4.40
332 333 3.134127 GCACCCACCGAAGCCATC 61.134 66.667 0.00 0.00 0.00 3.51
345 346 4.220533 GAAGCCATCGAAATTCCATCTG 57.779 45.455 0.00 0.00 0.00 2.90
346 347 3.565764 AGCCATCGAAATTCCATCTGA 57.434 42.857 0.00 0.00 0.00 3.27
347 348 3.889815 AGCCATCGAAATTCCATCTGAA 58.110 40.909 0.00 0.00 37.38 3.02
348 349 3.881688 AGCCATCGAAATTCCATCTGAAG 59.118 43.478 0.00 0.00 36.14 3.02
349 350 3.549625 GCCATCGAAATTCCATCTGAAGC 60.550 47.826 0.00 0.00 36.14 3.86
350 351 3.004106 CCATCGAAATTCCATCTGAAGCC 59.996 47.826 0.00 0.00 36.14 4.35
351 352 3.634397 TCGAAATTCCATCTGAAGCCT 57.366 42.857 0.00 0.00 36.14 4.58
352 353 3.273434 TCGAAATTCCATCTGAAGCCTG 58.727 45.455 0.00 0.00 36.14 4.85
353 354 2.223433 CGAAATTCCATCTGAAGCCTGC 60.223 50.000 0.00 0.00 36.14 4.85
354 355 2.822707 AATTCCATCTGAAGCCTGCT 57.177 45.000 0.00 0.00 36.14 4.24
355 356 2.822707 ATTCCATCTGAAGCCTGCTT 57.177 45.000 3.62 3.62 36.14 3.91
356 357 3.939740 ATTCCATCTGAAGCCTGCTTA 57.060 42.857 4.03 0.00 36.14 3.09
357 358 2.698855 TCCATCTGAAGCCTGCTTAC 57.301 50.000 4.03 0.00 36.26 2.34
358 359 1.134699 TCCATCTGAAGCCTGCTTACG 60.135 52.381 4.03 0.00 36.26 3.18
359 360 1.293924 CATCTGAAGCCTGCTTACGG 58.706 55.000 4.03 4.44 36.26 4.02
371 372 1.756367 GCTTACGGCAGATCGAGTAC 58.244 55.000 0.00 0.00 41.35 2.73
372 373 1.065102 GCTTACGGCAGATCGAGTACA 59.935 52.381 0.00 0.00 41.35 2.90
373 374 2.287668 GCTTACGGCAGATCGAGTACAT 60.288 50.000 0.00 0.00 41.35 2.29
374 375 3.058432 GCTTACGGCAGATCGAGTACATA 60.058 47.826 0.00 0.00 41.35 2.29
375 376 4.465016 CTTACGGCAGATCGAGTACATAC 58.535 47.826 0.00 0.00 0.00 2.39
376 377 2.294979 ACGGCAGATCGAGTACATACA 58.705 47.619 0.00 0.00 0.00 2.29
377 378 2.885266 ACGGCAGATCGAGTACATACAT 59.115 45.455 0.00 0.00 0.00 2.29
378 379 4.070009 ACGGCAGATCGAGTACATACATA 58.930 43.478 0.00 0.00 0.00 2.29
379 380 4.700692 ACGGCAGATCGAGTACATACATAT 59.299 41.667 0.00 0.00 0.00 1.78
380 381 5.878669 ACGGCAGATCGAGTACATACATATA 59.121 40.000 0.00 0.00 0.00 0.86
381 382 6.183360 ACGGCAGATCGAGTACATACATATAC 60.183 42.308 0.00 0.00 0.00 1.47
382 383 6.037281 CGGCAGATCGAGTACATACATATACT 59.963 42.308 0.00 0.00 34.28 2.12
383 384 7.411274 GGCAGATCGAGTACATACATATACTC 58.589 42.308 0.00 0.00 42.58 2.59
384 385 7.411274 GCAGATCGAGTACATACATATACTCC 58.589 42.308 0.00 0.00 42.90 3.85
385 386 7.467539 GCAGATCGAGTACATACATATACTCCC 60.468 44.444 0.00 0.00 42.90 4.30
386 387 7.771361 CAGATCGAGTACATACATATACTCCCT 59.229 40.741 0.00 0.00 42.90 4.20
387 388 7.988599 AGATCGAGTACATACATATACTCCCTC 59.011 40.741 0.00 1.02 42.90 4.30
388 389 6.413052 TCGAGTACATACATATACTCCCTCC 58.587 44.000 0.00 0.00 42.90 4.30
389 390 5.293814 CGAGTACATACATATACTCCCTCCG 59.706 48.000 0.00 0.00 42.90 4.63
390 391 6.137104 AGTACATACATATACTCCCTCCGT 57.863 41.667 0.00 0.00 0.00 4.69
391 392 6.550163 AGTACATACATATACTCCCTCCGTT 58.450 40.000 0.00 0.00 0.00 4.44
392 393 7.008941 AGTACATACATATACTCCCTCCGTTT 58.991 38.462 0.00 0.00 0.00 3.60
393 394 6.342338 ACATACATATACTCCCTCCGTTTC 57.658 41.667 0.00 0.00 0.00 2.78
394 395 6.075984 ACATACATATACTCCCTCCGTTTCT 58.924 40.000 0.00 0.00 0.00 2.52
395 396 7.236529 ACATACATATACTCCCTCCGTTTCTA 58.763 38.462 0.00 0.00 0.00 2.10
396 397 7.727186 ACATACATATACTCCCTCCGTTTCTAA 59.273 37.037 0.00 0.00 0.00 2.10
397 398 8.582437 CATACATATACTCCCTCCGTTTCTAAA 58.418 37.037 0.00 0.00 0.00 1.85
398 399 7.613551 ACATATACTCCCTCCGTTTCTAAAT 57.386 36.000 0.00 0.00 0.00 1.40
399 400 8.716674 ACATATACTCCCTCCGTTTCTAAATA 57.283 34.615 0.00 0.00 0.00 1.40
400 401 8.583296 ACATATACTCCCTCCGTTTCTAAATAC 58.417 37.037 0.00 0.00 0.00 1.89
401 402 8.582437 CATATACTCCCTCCGTTTCTAAATACA 58.418 37.037 0.00 0.00 0.00 2.29
402 403 5.750352 ACTCCCTCCGTTTCTAAATACAA 57.250 39.130 0.00 0.00 0.00 2.41
403 404 5.731591 ACTCCCTCCGTTTCTAAATACAAG 58.268 41.667 0.00 0.00 0.00 3.16
404 405 5.247792 ACTCCCTCCGTTTCTAAATACAAGT 59.752 40.000 0.00 0.00 0.00 3.16
405 406 5.727434 TCCCTCCGTTTCTAAATACAAGTC 58.273 41.667 0.00 0.00 0.00 3.01
406 407 4.874396 CCCTCCGTTTCTAAATACAAGTCC 59.126 45.833 0.00 0.00 0.00 3.85
407 408 5.338137 CCCTCCGTTTCTAAATACAAGTCCT 60.338 44.000 0.00 0.00 0.00 3.85
408 409 6.171213 CCTCCGTTTCTAAATACAAGTCCTT 58.829 40.000 0.00 0.00 0.00 3.36
409 410 6.653740 CCTCCGTTTCTAAATACAAGTCCTTT 59.346 38.462 0.00 0.00 0.00 3.11
410 411 7.174426 CCTCCGTTTCTAAATACAAGTCCTTTT 59.826 37.037 0.00 0.00 0.00 2.27
411 412 8.454570 TCCGTTTCTAAATACAAGTCCTTTTT 57.545 30.769 0.00 0.00 0.00 1.94
412 413 9.558396 TCCGTTTCTAAATACAAGTCCTTTTTA 57.442 29.630 0.00 0.00 0.00 1.52
413 414 9.821662 CCGTTTCTAAATACAAGTCCTTTTTAG 57.178 33.333 0.00 0.00 33.31 1.85
414 415 9.821662 CGTTTCTAAATACAAGTCCTTTTTAGG 57.178 33.333 8.66 0.00 33.02 2.69
421 422 8.950007 AATACAAGTCCTTTTTAGGGATTTCA 57.050 30.769 0.00 0.00 35.15 2.69
422 423 8.950007 ATACAAGTCCTTTTTAGGGATTTCAA 57.050 30.769 0.00 0.00 35.15 2.69
423 424 7.855784 ACAAGTCCTTTTTAGGGATTTCAAT 57.144 32.000 0.00 0.00 35.15 2.57
424 425 8.950007 ACAAGTCCTTTTTAGGGATTTCAATA 57.050 30.769 0.00 0.00 35.15 1.90
425 426 9.374711 ACAAGTCCTTTTTAGGGATTTCAATAA 57.625 29.630 0.00 0.00 35.15 1.40
428 429 9.822727 AGTCCTTTTTAGGGATTTCAATAAAGA 57.177 29.630 0.00 0.00 35.15 2.52
429 430 9.856488 GTCCTTTTTAGGGATTTCAATAAAGAC 57.144 33.333 0.00 0.00 35.15 3.01
430 431 9.822727 TCCTTTTTAGGGATTTCAATAAAGACT 57.177 29.630 0.00 0.00 0.00 3.24
438 439 9.838339 AGGGATTTCAATAAAGACTACATACAG 57.162 33.333 0.00 0.00 0.00 2.74
439 440 9.832445 GGGATTTCAATAAAGACTACATACAGA 57.168 33.333 0.00 0.00 0.00 3.41
454 455 9.163899 ACTACATACAGATGTATATAGACACGG 57.836 37.037 19.96 1.28 45.42 4.94
455 456 7.997773 ACATACAGATGTATATAGACACGGT 57.002 36.000 1.52 6.70 44.77 4.83
456 457 8.405418 ACATACAGATGTATATAGACACGGTT 57.595 34.615 1.52 0.00 44.77 4.44
457 458 8.857098 ACATACAGATGTATATAGACACGGTTT 58.143 33.333 1.52 0.00 44.77 3.27
460 461 8.687292 ACAGATGTATATAGACACGGTTTAGA 57.313 34.615 1.52 0.00 30.52 2.10
461 462 9.128404 ACAGATGTATATAGACACGGTTTAGAA 57.872 33.333 1.52 0.00 30.52 2.10
464 465 9.909644 GATGTATATAGACACGGTTTAGAATGT 57.090 33.333 1.52 0.00 30.52 2.71
471 472 6.931838 AGACACGGTTTAGAATGTAGATTCA 58.068 36.000 14.46 0.00 40.59 2.57
472 473 7.383687 AGACACGGTTTAGAATGTAGATTCAA 58.616 34.615 14.46 4.79 40.59 2.69
473 474 8.041323 AGACACGGTTTAGAATGTAGATTCAAT 58.959 33.333 14.46 0.00 40.59 2.57
474 475 8.197988 ACACGGTTTAGAATGTAGATTCAATC 57.802 34.615 14.46 1.44 40.59 2.67
475 476 7.822334 ACACGGTTTAGAATGTAGATTCAATCA 59.178 33.333 14.46 0.00 40.59 2.57
476 477 8.830580 CACGGTTTAGAATGTAGATTCAATCAT 58.169 33.333 14.46 0.00 40.59 2.45
477 478 9.396022 ACGGTTTAGAATGTAGATTCAATCATT 57.604 29.630 14.46 0.00 40.59 2.57
484 485 8.411683 AGAATGTAGATTCAATCATTTTGCTCC 58.588 33.333 14.46 0.00 40.59 4.70
485 486 6.122850 TGTAGATTCAATCATTTTGCTCCG 57.877 37.500 0.00 0.00 0.00 4.63
486 487 5.647658 TGTAGATTCAATCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
487 488 6.821160 TGTAGATTCAATCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
488 489 6.949352 AGATTCAATCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
489 490 6.732154 AGATTCAATCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
490 491 5.895636 TTCAATCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
491 492 6.993786 TTCAATCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
492 493 6.603237 TCAATCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
493 494 6.112734 TCAATCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
494 495 6.597672 TCAATCATTTTGCTCCGTATGTAGTT 59.402 34.615 0.00 0.00 0.00 2.24
495 496 7.120579 TCAATCATTTTGCTCCGTATGTAGTTT 59.879 33.333 0.00 0.00 0.00 2.66
496 497 6.176975 TCATTTTGCTCCGTATGTAGTTTG 57.823 37.500 0.00 0.00 0.00 2.93
497 498 5.703592 TCATTTTGCTCCGTATGTAGTTTGT 59.296 36.000 0.00 0.00 0.00 2.83
498 499 6.874664 TCATTTTGCTCCGTATGTAGTTTGTA 59.125 34.615 0.00 0.00 0.00 2.41
499 500 7.551262 TCATTTTGCTCCGTATGTAGTTTGTAT 59.449 33.333 0.00 0.00 0.00 2.29
500 501 7.675962 TTTTGCTCCGTATGTAGTTTGTATT 57.324 32.000 0.00 0.00 0.00 1.89
501 502 6.656314 TTGCTCCGTATGTAGTTTGTATTG 57.344 37.500 0.00 0.00 0.00 1.90
502 503 5.968254 TGCTCCGTATGTAGTTTGTATTGA 58.032 37.500 0.00 0.00 0.00 2.57
503 504 6.399743 TGCTCCGTATGTAGTTTGTATTGAA 58.600 36.000 0.00 0.00 0.00 2.69
504 505 6.874664 TGCTCCGTATGTAGTTTGTATTGAAA 59.125 34.615 0.00 0.00 0.00 2.69
505 506 7.551262 TGCTCCGTATGTAGTTTGTATTGAAAT 59.449 33.333 0.00 0.00 0.00 2.17
506 507 9.037737 GCTCCGTATGTAGTTTGTATTGAAATA 57.962 33.333 0.00 0.00 0.00 1.40
538 539 6.071320 AGATTTGTATTTAGGAATGGAGGGC 58.929 40.000 0.00 0.00 0.00 5.19
582 583 5.126707 CCATTTGATGGGAAGAAGAAAGGAG 59.873 44.000 0.00 0.00 46.86 3.69
610 611 1.992557 TGAAATGGGCTCTTGGTAGGT 59.007 47.619 0.00 0.00 0.00 3.08
611 612 2.290896 TGAAATGGGCTCTTGGTAGGTG 60.291 50.000 0.00 0.00 0.00 4.00
612 613 0.625849 AATGGGCTCTTGGTAGGTGG 59.374 55.000 0.00 0.00 0.00 4.61
666 668 5.350633 TGCTTGTGAAACTTGGAATCTTTG 58.649 37.500 0.00 0.00 38.04 2.77
674 676 5.712152 AACTTGGAATCTTTGATCCACAC 57.288 39.130 0.00 0.00 45.14 3.82
676 678 3.085952 TGGAATCTTTGATCCACACCC 57.914 47.619 0.00 0.00 40.74 4.61
678 680 3.011595 TGGAATCTTTGATCCACACCCAT 59.988 43.478 0.00 0.00 40.74 4.00
679 681 3.382546 GGAATCTTTGATCCACACCCATG 59.617 47.826 0.00 0.00 35.71 3.66
681 683 3.524095 TCTTTGATCCACACCCATGTT 57.476 42.857 0.00 0.00 36.72 2.71
682 684 3.843422 TCTTTGATCCACACCCATGTTT 58.157 40.909 0.00 0.00 36.72 2.83
703 705 3.743521 TGAGAGTTGGTTGAGATGTTGG 58.256 45.455 0.00 0.00 0.00 3.77
735 737 3.146104 ACTCAACTAACTTGCATGCCT 57.854 42.857 16.68 0.00 0.00 4.75
804 813 2.029918 GTCCCCAAGCACAAAACTCATC 60.030 50.000 0.00 0.00 0.00 2.92
838 851 1.306568 GCAACCCCTCTCCTCTCCT 60.307 63.158 0.00 0.00 0.00 3.69
842 855 1.293683 ACCCCTCTCCTCTCCTCTCC 61.294 65.000 0.00 0.00 0.00 3.71
860 873 0.392998 CCCCATGGAGGAGTTCAACG 60.393 60.000 15.22 0.00 41.22 4.10
900 913 6.070881 TCCTCATCTTCCTCTTCTTCTTCTTG 60.071 42.308 0.00 0.00 0.00 3.02
904 917 4.349342 TCTTCCTCTTCTTCTTCTTGCCTT 59.651 41.667 0.00 0.00 0.00 4.35
913 926 3.213206 TCTTCTTGCCTTTCAGCTCAA 57.787 42.857 0.00 0.00 0.00 3.02
920 933 2.075338 GCCTTTCAGCTCAACTCTCTG 58.925 52.381 0.00 0.00 0.00 3.35
921 934 2.697654 CCTTTCAGCTCAACTCTCTGG 58.302 52.381 0.00 0.00 0.00 3.86
922 935 2.075338 CTTTCAGCTCAACTCTCTGGC 58.925 52.381 0.00 0.00 0.00 4.85
923 936 1.346062 TTCAGCTCAACTCTCTGGCT 58.654 50.000 0.00 0.00 0.00 4.75
924 937 1.346062 TCAGCTCAACTCTCTGGCTT 58.654 50.000 0.00 0.00 0.00 4.35
925 938 2.529632 TCAGCTCAACTCTCTGGCTTA 58.470 47.619 0.00 0.00 0.00 3.09
926 939 2.232452 TCAGCTCAACTCTCTGGCTTAC 59.768 50.000 0.00 0.00 0.00 2.34
927 940 1.552792 AGCTCAACTCTCTGGCTTACC 59.447 52.381 0.00 0.00 0.00 2.85
928 941 1.276421 GCTCAACTCTCTGGCTTACCA 59.724 52.381 0.00 0.00 46.51 3.25
936 949 3.512035 TGGCTTACCATGCATGCG 58.488 55.556 21.69 16.19 42.67 4.73
937 950 1.378382 TGGCTTACCATGCATGCGT 60.378 52.632 21.69 20.70 42.67 5.24
957 988 1.595382 CTCCCGCCATTGATCGTCC 60.595 63.158 0.00 0.00 0.00 4.79
976 1007 4.561606 CGTCCAAGCTTATATATACACGGC 59.438 45.833 0.00 0.00 0.00 5.68
1026 1064 0.725133 TCCCTTCTCCCATCCCTCTT 59.275 55.000 0.00 0.00 0.00 2.85
1056 1094 2.238521 TCCATTCCCACAAGCAAGAAC 58.761 47.619 0.00 0.00 0.00 3.01
1069 1115 1.069636 GCAAGAACCAAACAGAGCTCG 60.070 52.381 8.37 6.04 0.00 5.03
1719 1801 4.143333 GGCGGCGACTCCTGCTAA 62.143 66.667 12.98 0.00 35.61 3.09
1720 1802 2.583593 GCGGCGACTCCTGCTAAG 60.584 66.667 12.98 0.00 33.56 2.18
1721 1803 2.583593 CGGCGACTCCTGCTAAGC 60.584 66.667 0.00 0.00 0.00 3.09
1722 1804 2.202946 GGCGACTCCTGCTAAGCC 60.203 66.667 0.00 0.00 37.61 4.35
1723 1805 2.202946 GCGACTCCTGCTAAGCCC 60.203 66.667 0.00 0.00 0.00 5.19
1724 1806 2.105128 CGACTCCTGCTAAGCCCG 59.895 66.667 0.00 0.00 0.00 6.13
1725 1807 2.415608 CGACTCCTGCTAAGCCCGA 61.416 63.158 0.00 0.00 0.00 5.14
1726 1808 1.898154 GACTCCTGCTAAGCCCGAA 59.102 57.895 0.00 0.00 0.00 4.30
1727 1809 0.179097 GACTCCTGCTAAGCCCGAAG 60.179 60.000 0.00 0.00 0.00 3.79
1783 1865 3.115892 GCGGCCAAATCGACGACA 61.116 61.111 2.24 0.00 0.00 4.35
1819 1901 4.467107 GCCCCTCCTCCTCCGTCT 62.467 72.222 0.00 0.00 0.00 4.18
1820 1902 2.123640 CCCCTCCTCCTCCGTCTC 60.124 72.222 0.00 0.00 0.00 3.36
1823 1905 1.454847 CCTCCTCCTCCGTCTCCTG 60.455 68.421 0.00 0.00 0.00 3.86
1829 1911 2.654079 CCTCCGTCTCCTGCTGCTT 61.654 63.158 0.00 0.00 0.00 3.91
1832 1914 0.323451 TCCGTCTCCTGCTGCTTCTA 60.323 55.000 0.00 0.00 0.00 2.10
1849 1931 2.615262 CTACTTCTCCGGCGGCTGTC 62.615 65.000 23.83 0.00 0.00 3.51
1900 1982 3.175710 AGCACGGGGAAGGTGGTT 61.176 61.111 0.00 0.00 42.96 3.67
1906 1988 1.770749 CGGGGAAGGTGGTTGTGGTA 61.771 60.000 0.00 0.00 0.00 3.25
1908 1990 0.608308 GGGAAGGTGGTTGTGGTAGC 60.608 60.000 0.00 0.00 0.00 3.58
1997 2079 3.803082 CGCCACCGTTCAGCATGG 61.803 66.667 0.00 0.00 36.16 3.66
2011 2093 1.985614 CATGGTCCTCAGGCACTCA 59.014 57.895 0.00 0.00 34.60 3.41
2104 2191 8.127327 CAGCTTAATTGTAGTTCTGATCCATTG 58.873 37.037 0.00 0.00 0.00 2.82
2109 2196 6.908870 TTGTAGTTCTGATCCATTGATTCG 57.091 37.500 0.00 0.00 0.00 3.34
2113 2200 1.490069 TCTGATCCATTGATTCGCCCA 59.510 47.619 0.00 0.00 0.00 5.36
2120 2207 3.119173 TCCATTGATTCGCCCAAATTCAC 60.119 43.478 0.00 0.00 0.00 3.18
2176 2288 6.140303 TGTACATCATAGTTAACCTCGACC 57.860 41.667 0.88 0.00 0.00 4.79
2215 2327 6.434028 ACAGCAATGTTTAGTGTAACCATCAT 59.566 34.615 0.00 0.00 37.80 2.45
2241 2356 8.849168 TCATCATCATGTTGTAAAAAGACAGTT 58.151 29.630 3.76 0.00 0.00 3.16
2245 2360 9.121517 CATCATGTTGTAAAAAGACAGTTCATC 57.878 33.333 0.00 0.00 0.00 2.92
2560 2680 0.742281 CCCTCAACTGGAGCATCACG 60.742 60.000 0.00 0.00 42.62 4.35
2693 3029 5.102953 TGGACTGTATGATTTCTTCCTGG 57.897 43.478 0.00 0.00 0.00 4.45
2697 3033 6.352222 GGACTGTATGATTTCTTCCTGGAGAA 60.352 42.308 0.00 0.62 34.00 2.87
2762 3101 5.906073 AGATTGAACCCAGACAAAACAAAG 58.094 37.500 0.00 0.00 0.00 2.77
2905 3622 7.622713 ACAAGAATTCTTCATCTCATCTCACT 58.377 34.615 17.91 0.00 33.11 3.41
2907 3624 7.664552 AGAATTCTTCATCTCATCTCACTCT 57.335 36.000 0.88 0.00 0.00 3.24
2908 3625 8.081517 AGAATTCTTCATCTCATCTCACTCTT 57.918 34.615 0.88 0.00 0.00 2.85
2912 3629 6.404708 TCTTCATCTCATCTCACTCTTTTGG 58.595 40.000 0.00 0.00 0.00 3.28
2932 3649 3.676093 GGTTGGGACCAAACAAAACAAA 58.324 40.909 13.92 0.00 45.77 2.83
2994 3711 7.404671 AAAGTTTCATTTCACTACACCAACT 57.595 32.000 0.00 0.00 0.00 3.16
2995 3712 7.404671 AAGTTTCATTTCACTACACCAACTT 57.595 32.000 0.00 0.00 0.00 2.66
2996 3713 8.514330 AAGTTTCATTTCACTACACCAACTTA 57.486 30.769 0.00 0.00 31.74 2.24
2997 3714 8.154649 AGTTTCATTTCACTACACCAACTTAG 57.845 34.615 0.00 0.00 0.00 2.18
2998 3715 7.990886 AGTTTCATTTCACTACACCAACTTAGA 59.009 33.333 0.00 0.00 0.00 2.10
2999 3716 7.962964 TTCATTTCACTACACCAACTTAGAG 57.037 36.000 0.00 0.00 0.00 2.43
3000 3717 5.932303 TCATTTCACTACACCAACTTAGAGC 59.068 40.000 0.00 0.00 0.00 4.09
3001 3718 4.948341 TTCACTACACCAACTTAGAGCA 57.052 40.909 0.00 0.00 0.00 4.26
3002 3719 4.521130 TCACTACACCAACTTAGAGCAG 57.479 45.455 0.00 0.00 0.00 4.24
3003 3720 2.996621 CACTACACCAACTTAGAGCAGC 59.003 50.000 0.00 0.00 0.00 5.25
3046 3768 2.893424 ACATCCAAAGGGCAACAAGAT 58.107 42.857 0.00 0.00 39.74 2.40
3048 3770 3.007182 ACATCCAAAGGGCAACAAGATTG 59.993 43.478 0.00 0.00 39.74 2.67
3049 3771 1.344114 TCCAAAGGGCAACAAGATTGC 59.656 47.619 3.00 3.00 44.22 3.56
3050 3772 1.345415 CCAAAGGGCAACAAGATTGCT 59.655 47.619 11.12 0.00 44.36 3.91
3051 3773 2.562298 CCAAAGGGCAACAAGATTGCTA 59.438 45.455 11.12 0.00 44.36 3.49
3053 3775 4.502950 CCAAAGGGCAACAAGATTGCTAAA 60.503 41.667 11.12 0.00 44.36 1.85
3054 3776 4.953940 AAGGGCAACAAGATTGCTAAAA 57.046 36.364 11.12 0.00 44.36 1.52
3074 3797 5.606348 AAATCTTGGCCAACAACACTTTA 57.394 34.783 16.05 0.00 34.76 1.85
3075 3798 4.853924 ATCTTGGCCAACAACACTTTAG 57.146 40.909 16.05 0.00 34.76 1.85
3076 3799 2.360801 TCTTGGCCAACAACACTTTAGC 59.639 45.455 16.05 0.00 34.76 3.09
3082 3805 3.796717 GCCAACAACACTTTAGCTTCAAC 59.203 43.478 0.00 0.00 0.00 3.18
3083 3806 4.440112 GCCAACAACACTTTAGCTTCAACT 60.440 41.667 0.00 0.00 0.00 3.16
3089 3812 6.992715 ACAACACTTTAGCTTCAACTAGATGT 59.007 34.615 0.00 0.00 0.00 3.06
3124 3847 5.362430 AGACAAAGTACAATTCAAGGGCAAA 59.638 36.000 0.00 0.00 0.00 3.68
3129 3852 4.588528 AGTACAATTCAAGGGCAAACACAT 59.411 37.500 0.00 0.00 0.00 3.21
3147 3870 5.319453 ACACATGATTGTCAATCTCTTGGT 58.681 37.500 22.89 13.27 38.72 3.67
3157 3880 4.576463 GTCAATCTCTTGGTCAACAACACT 59.424 41.667 0.00 0.00 34.76 3.55
3171 3894 6.020678 GTCAACAACACTTCATTTGCTACAAC 60.021 38.462 0.00 0.00 0.00 3.32
3183 3906 6.544197 TCATTTGCTACAACAAGAGGTTAACA 59.456 34.615 8.10 0.00 37.72 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.784680 TGTAAGACGTTTTTGCAGTTTAATAAA 57.215 25.926 0.00 0.00 0.00 1.40
13 14 9.953697 ATGTAAGACGTTTTTGCAGTTTAATAA 57.046 25.926 0.00 0.00 0.00 1.40
14 15 9.953697 AATGTAAGACGTTTTTGCAGTTTAATA 57.046 25.926 0.00 0.00 0.00 0.98
15 16 8.865590 AATGTAAGACGTTTTTGCAGTTTAAT 57.134 26.923 0.00 0.00 0.00 1.40
16 17 8.587950 CAAATGTAAGACGTTTTTGCAGTTTAA 58.412 29.630 12.23 0.00 35.31 1.52
17 18 7.755822 ACAAATGTAAGACGTTTTTGCAGTTTA 59.244 29.630 12.23 0.00 35.31 2.01
18 19 6.588373 ACAAATGTAAGACGTTTTTGCAGTTT 59.412 30.769 12.23 9.00 35.31 2.66
19 20 6.034470 CACAAATGTAAGACGTTTTTGCAGTT 59.966 34.615 10.13 10.13 35.31 3.16
20 21 5.514914 CACAAATGTAAGACGTTTTTGCAGT 59.485 36.000 0.00 0.00 35.31 4.40
21 22 5.514914 ACACAAATGTAAGACGTTTTTGCAG 59.485 36.000 0.00 0.00 37.95 4.41
22 23 5.403246 ACACAAATGTAAGACGTTTTTGCA 58.597 33.333 0.00 1.87 37.95 4.08
23 24 5.942325 ACACAAATGTAAGACGTTTTTGC 57.058 34.783 0.00 0.00 37.95 3.68
24 25 7.190871 AGGTACACAAATGTAAGACGTTTTTG 58.809 34.615 0.00 8.27 42.99 2.44
25 26 7.324354 AGGTACACAAATGTAAGACGTTTTT 57.676 32.000 0.00 0.00 42.99 1.94
26 27 6.930667 AGGTACACAAATGTAAGACGTTTT 57.069 33.333 0.00 0.00 42.99 2.43
27 28 7.436118 TCTAGGTACACAAATGTAAGACGTTT 58.564 34.615 0.00 0.00 42.99 3.60
28 29 6.985117 TCTAGGTACACAAATGTAAGACGTT 58.015 36.000 0.00 0.00 42.99 3.99
29 30 6.349944 CCTCTAGGTACACAAATGTAAGACGT 60.350 42.308 0.00 0.00 42.99 4.34
30 31 6.034591 CCTCTAGGTACACAAATGTAAGACG 58.965 44.000 0.00 0.00 42.99 4.18
31 32 6.338937 CCCTCTAGGTACACAAATGTAAGAC 58.661 44.000 0.00 0.00 42.99 3.01
32 33 6.540438 CCCTCTAGGTACACAAATGTAAGA 57.460 41.667 0.00 0.00 42.99 2.10
55 56 4.430908 GTGTGAAGCTGGGTATGTACTAC 58.569 47.826 0.00 0.00 0.00 2.73
56 57 3.449737 GGTGTGAAGCTGGGTATGTACTA 59.550 47.826 0.00 0.00 0.00 1.82
57 58 2.236395 GGTGTGAAGCTGGGTATGTACT 59.764 50.000 0.00 0.00 0.00 2.73
58 59 2.629051 GGTGTGAAGCTGGGTATGTAC 58.371 52.381 0.00 0.00 0.00 2.90
59 60 1.206132 CGGTGTGAAGCTGGGTATGTA 59.794 52.381 0.00 0.00 0.00 2.29
60 61 0.036388 CGGTGTGAAGCTGGGTATGT 60.036 55.000 0.00 0.00 0.00 2.29
61 62 0.036388 ACGGTGTGAAGCTGGGTATG 60.036 55.000 0.00 0.00 0.00 2.39
62 63 0.690762 AACGGTGTGAAGCTGGGTAT 59.309 50.000 0.00 0.00 0.00 2.73
63 64 0.250124 CAACGGTGTGAAGCTGGGTA 60.250 55.000 0.00 0.00 0.00 3.69
64 65 1.525995 CAACGGTGTGAAGCTGGGT 60.526 57.895 0.00 0.00 0.00 4.51
65 66 2.908073 GCAACGGTGTGAAGCTGGG 61.908 63.158 0.66 0.00 0.00 4.45
66 67 1.518056 ATGCAACGGTGTGAAGCTGG 61.518 55.000 0.66 0.00 0.00 4.85
67 68 0.311790 AATGCAACGGTGTGAAGCTG 59.688 50.000 0.66 0.00 0.00 4.24
68 69 1.890876 TAATGCAACGGTGTGAAGCT 58.109 45.000 0.66 0.00 0.00 3.74
69 70 2.919666 ATAATGCAACGGTGTGAAGC 57.080 45.000 0.66 0.00 0.00 3.86
114 115 9.995003 GTGATGAAGATGAATAGATAGGAAGTT 57.005 33.333 0.00 0.00 0.00 2.66
115 116 9.152327 TGTGATGAAGATGAATAGATAGGAAGT 57.848 33.333 0.00 0.00 0.00 3.01
116 117 9.421806 GTGTGATGAAGATGAATAGATAGGAAG 57.578 37.037 0.00 0.00 0.00 3.46
117 118 8.370940 GGTGTGATGAAGATGAATAGATAGGAA 58.629 37.037 0.00 0.00 0.00 3.36
118 119 7.510343 TGGTGTGATGAAGATGAATAGATAGGA 59.490 37.037 0.00 0.00 0.00 2.94
119 120 7.674120 TGGTGTGATGAAGATGAATAGATAGG 58.326 38.462 0.00 0.00 0.00 2.57
120 121 9.722184 AATGGTGTGATGAAGATGAATAGATAG 57.278 33.333 0.00 0.00 0.00 2.08
121 122 9.498176 CAATGGTGTGATGAAGATGAATAGATA 57.502 33.333 0.00 0.00 0.00 1.98
122 123 7.040617 GCAATGGTGTGATGAAGATGAATAGAT 60.041 37.037 0.00 0.00 0.00 1.98
123 124 6.261603 GCAATGGTGTGATGAAGATGAATAGA 59.738 38.462 0.00 0.00 0.00 1.98
124 125 6.038936 TGCAATGGTGTGATGAAGATGAATAG 59.961 38.462 0.00 0.00 0.00 1.73
125 126 5.887035 TGCAATGGTGTGATGAAGATGAATA 59.113 36.000 0.00 0.00 0.00 1.75
126 127 4.707934 TGCAATGGTGTGATGAAGATGAAT 59.292 37.500 0.00 0.00 0.00 2.57
127 128 4.080687 TGCAATGGTGTGATGAAGATGAA 58.919 39.130 0.00 0.00 0.00 2.57
128 129 3.688235 TGCAATGGTGTGATGAAGATGA 58.312 40.909 0.00 0.00 0.00 2.92
129 130 4.649088 ATGCAATGGTGTGATGAAGATG 57.351 40.909 0.00 0.00 0.00 2.90
130 131 6.971726 AATATGCAATGGTGTGATGAAGAT 57.028 33.333 0.00 0.00 0.00 2.40
131 132 6.458615 CGAAATATGCAATGGTGTGATGAAGA 60.459 38.462 0.00 0.00 0.00 2.87
132 133 5.684184 CGAAATATGCAATGGTGTGATGAAG 59.316 40.000 0.00 0.00 0.00 3.02
133 134 5.125257 ACGAAATATGCAATGGTGTGATGAA 59.875 36.000 0.00 0.00 0.00 2.57
134 135 4.639755 ACGAAATATGCAATGGTGTGATGA 59.360 37.500 0.00 0.00 0.00 2.92
135 136 4.736307 CACGAAATATGCAATGGTGTGATG 59.264 41.667 0.00 0.00 0.00 3.07
136 137 4.398988 ACACGAAATATGCAATGGTGTGAT 59.601 37.500 13.10 0.00 35.97 3.06
137 138 3.755905 ACACGAAATATGCAATGGTGTGA 59.244 39.130 13.10 0.00 35.97 3.58
138 139 4.095410 ACACGAAATATGCAATGGTGTG 57.905 40.909 10.52 8.71 35.97 3.82
139 140 4.335315 CCTACACGAAATATGCAATGGTGT 59.665 41.667 14.04 14.04 40.01 4.16
140 141 4.574421 TCCTACACGAAATATGCAATGGTG 59.426 41.667 0.00 0.00 0.00 4.17
141 142 4.776349 TCCTACACGAAATATGCAATGGT 58.224 39.130 0.00 0.00 0.00 3.55
142 143 5.749596 TTCCTACACGAAATATGCAATGG 57.250 39.130 0.00 0.00 0.00 3.16
143 144 8.633075 ATTTTTCCTACACGAAATATGCAATG 57.367 30.769 0.00 0.00 32.00 2.82
144 145 8.465999 TGATTTTTCCTACACGAAATATGCAAT 58.534 29.630 0.00 0.00 32.00 3.56
145 146 7.821652 TGATTTTTCCTACACGAAATATGCAA 58.178 30.769 0.00 0.00 32.00 4.08
146 147 7.384439 TGATTTTTCCTACACGAAATATGCA 57.616 32.000 0.00 0.00 32.00 3.96
147 148 8.682128 TTTGATTTTTCCTACACGAAATATGC 57.318 30.769 0.00 0.00 32.00 3.14
148 149 9.289303 CCTTTGATTTTTCCTACACGAAATATG 57.711 33.333 0.00 0.00 32.00 1.78
149 150 7.973944 GCCTTTGATTTTTCCTACACGAAATAT 59.026 33.333 0.00 0.00 32.00 1.28
150 151 7.309920 GCCTTTGATTTTTCCTACACGAAATA 58.690 34.615 0.00 0.00 32.00 1.40
151 152 6.156519 GCCTTTGATTTTTCCTACACGAAAT 58.843 36.000 0.00 0.00 32.00 2.17
152 153 5.508320 GGCCTTTGATTTTTCCTACACGAAA 60.508 40.000 0.00 0.00 0.00 3.46
153 154 4.022676 GGCCTTTGATTTTTCCTACACGAA 60.023 41.667 0.00 0.00 0.00 3.85
154 155 3.504520 GGCCTTTGATTTTTCCTACACGA 59.495 43.478 0.00 0.00 0.00 4.35
155 156 3.254657 TGGCCTTTGATTTTTCCTACACG 59.745 43.478 3.32 0.00 0.00 4.49
156 157 4.809673 CTGGCCTTTGATTTTTCCTACAC 58.190 43.478 3.32 0.00 0.00 2.90
157 158 3.258123 GCTGGCCTTTGATTTTTCCTACA 59.742 43.478 3.32 0.00 0.00 2.74
158 159 3.258123 TGCTGGCCTTTGATTTTTCCTAC 59.742 43.478 3.32 0.00 0.00 3.18
159 160 3.505386 TGCTGGCCTTTGATTTTTCCTA 58.495 40.909 3.32 0.00 0.00 2.94
160 161 2.328319 TGCTGGCCTTTGATTTTTCCT 58.672 42.857 3.32 0.00 0.00 3.36
161 162 2.837532 TGCTGGCCTTTGATTTTTCC 57.162 45.000 3.32 0.00 0.00 3.13
162 163 3.069289 CCTTGCTGGCCTTTGATTTTTC 58.931 45.455 3.32 0.00 0.00 2.29
163 164 3.130280 CCTTGCTGGCCTTTGATTTTT 57.870 42.857 3.32 0.00 0.00 1.94
164 165 2.845363 CCTTGCTGGCCTTTGATTTT 57.155 45.000 3.32 0.00 0.00 1.82
184 185 3.326210 GATCCTTCGAGCAGCGCG 61.326 66.667 12.95 12.95 40.61 6.86
185 186 1.593750 ATGATCCTTCGAGCAGCGC 60.594 57.895 0.00 0.00 37.93 5.92
186 187 0.249197 TCATGATCCTTCGAGCAGCG 60.249 55.000 0.00 0.00 37.93 5.18
187 188 1.945387 TTCATGATCCTTCGAGCAGC 58.055 50.000 0.00 0.00 37.93 5.25
188 189 4.952262 TTTTTCATGATCCTTCGAGCAG 57.048 40.909 0.00 0.00 37.93 4.24
229 230 9.743057 CACATATGTCAGAAAGGTAAACAAAAA 57.257 29.630 5.07 0.00 0.00 1.94
230 231 8.908903 ACACATATGTCAGAAAGGTAAACAAAA 58.091 29.630 5.07 0.00 31.55 2.44
231 232 8.458573 ACACATATGTCAGAAAGGTAAACAAA 57.541 30.769 5.07 0.00 31.55 2.83
232 233 9.214957 CTACACATATGTCAGAAAGGTAAACAA 57.785 33.333 5.07 0.00 40.48 2.83
233 234 7.333423 GCTACACATATGTCAGAAAGGTAAACA 59.667 37.037 5.07 0.00 40.48 2.83
234 235 7.333423 TGCTACACATATGTCAGAAAGGTAAAC 59.667 37.037 5.07 0.37 40.48 2.01
235 236 7.333423 GTGCTACACATATGTCAGAAAGGTAAA 59.667 37.037 5.07 0.00 40.48 2.01
236 237 6.816640 GTGCTACACATATGTCAGAAAGGTAA 59.183 38.462 5.07 0.00 40.48 2.85
237 238 6.071051 TGTGCTACACATATGTCAGAAAGGTA 60.071 38.462 5.07 2.81 39.62 3.08
238 239 5.178797 GTGCTACACATATGTCAGAAAGGT 58.821 41.667 5.07 1.66 40.48 3.50
239 240 5.178061 TGTGCTACACATATGTCAGAAAGG 58.822 41.667 5.07 0.00 39.62 3.11
254 255 2.992593 TGAACCTTGTTGTGTGCTACA 58.007 42.857 0.00 0.00 37.56 2.74
255 256 4.364415 TTTGAACCTTGTTGTGTGCTAC 57.636 40.909 0.00 0.00 0.00 3.58
256 257 5.590530 ATTTTGAACCTTGTTGTGTGCTA 57.409 34.783 0.00 0.00 0.00 3.49
257 258 3.951775 TTTTGAACCTTGTTGTGTGCT 57.048 38.095 0.00 0.00 0.00 4.40
258 259 5.544136 AAATTTTGAACCTTGTTGTGTGC 57.456 34.783 0.00 0.00 0.00 4.57
259 260 6.072783 ACCAAAATTTTGAACCTTGTTGTGTG 60.073 34.615 28.44 11.30 40.55 3.82
260 261 6.000840 ACCAAAATTTTGAACCTTGTTGTGT 58.999 32.000 28.44 12.41 40.55 3.72
261 262 6.493449 ACCAAAATTTTGAACCTTGTTGTG 57.507 33.333 28.44 11.85 40.55 3.33
262 263 7.661847 TGTTACCAAAATTTTGAACCTTGTTGT 59.338 29.630 28.44 17.22 40.55 3.32
263 264 8.034058 TGTTACCAAAATTTTGAACCTTGTTG 57.966 30.769 28.44 12.92 40.55 3.33
264 265 8.800370 ATGTTACCAAAATTTTGAACCTTGTT 57.200 26.923 28.44 6.87 40.55 2.83
265 266 9.320352 GTATGTTACCAAAATTTTGAACCTTGT 57.680 29.630 28.44 19.02 40.55 3.16
266 267 8.484008 CGTATGTTACCAAAATTTTGAACCTTG 58.516 33.333 28.44 14.81 40.55 3.61
267 268 7.170151 GCGTATGTTACCAAAATTTTGAACCTT 59.830 33.333 28.44 17.52 40.55 3.50
268 269 6.643360 GCGTATGTTACCAAAATTTTGAACCT 59.357 34.615 28.44 19.85 40.55 3.50
269 270 6.421202 TGCGTATGTTACCAAAATTTTGAACC 59.579 34.615 28.44 14.91 40.55 3.62
270 271 7.396190 TGCGTATGTTACCAAAATTTTGAAC 57.604 32.000 28.44 23.91 40.55 3.18
271 272 8.594881 AATGCGTATGTTACCAAAATTTTGAA 57.405 26.923 28.44 15.06 40.55 2.69
272 273 8.594881 AAATGCGTATGTTACCAAAATTTTGA 57.405 26.923 28.44 11.44 40.55 2.69
273 274 7.682055 CGAAATGCGTATGTTACCAAAATTTTG 59.318 33.333 21.65 21.65 35.08 2.44
274 275 7.725142 CGAAATGCGTATGTTACCAAAATTTT 58.275 30.769 0.00 0.00 34.64 1.82
275 276 7.271936 CGAAATGCGTATGTTACCAAAATTT 57.728 32.000 0.00 0.00 34.64 1.82
276 277 6.862944 CGAAATGCGTATGTTACCAAAATT 57.137 33.333 0.00 0.00 34.64 1.82
287 288 8.456286 GGAATTTCCATGTACGAAATGCGTATG 61.456 40.741 10.67 0.00 45.76 2.39
288 289 6.512741 GGAATTTCCATGTACGAAATGCGTAT 60.513 38.462 10.67 0.00 45.76 3.06
289 290 5.220700 GGAATTTCCATGTACGAAATGCGTA 60.221 40.000 10.67 0.00 43.84 4.42
290 291 4.438200 GGAATTTCCATGTACGAAATGCGT 60.438 41.667 10.67 0.00 46.01 5.24
291 292 4.035017 GGAATTTCCATGTACGAAATGCG 58.965 43.478 10.67 0.00 39.34 4.73
292 293 4.035017 CGGAATTTCCATGTACGAAATGC 58.965 43.478 15.58 7.10 39.34 3.56
293 294 4.597079 CCGGAATTTCCATGTACGAAATG 58.403 43.478 15.58 0.00 39.34 2.32
294 295 3.066203 GCCGGAATTTCCATGTACGAAAT 59.934 43.478 15.58 3.41 40.76 2.17
295 296 2.420722 GCCGGAATTTCCATGTACGAAA 59.579 45.455 15.58 0.00 35.91 3.46
296 297 2.011222 GCCGGAATTTCCATGTACGAA 58.989 47.619 15.58 0.00 35.91 3.85
297 298 1.066071 TGCCGGAATTTCCATGTACGA 60.066 47.619 15.58 0.00 35.91 3.43
298 299 1.063469 GTGCCGGAATTTCCATGTACG 59.937 52.381 15.58 0.43 35.91 3.67
299 300 1.404035 GGTGCCGGAATTTCCATGTAC 59.596 52.381 15.58 13.57 35.91 2.90
300 301 1.683629 GGGTGCCGGAATTTCCATGTA 60.684 52.381 15.58 2.81 35.91 2.29
301 302 0.970427 GGGTGCCGGAATTTCCATGT 60.970 55.000 15.58 0.00 35.91 3.21
302 303 0.969917 TGGGTGCCGGAATTTCCATG 60.970 55.000 15.58 6.89 35.91 3.66
303 304 0.970427 GTGGGTGCCGGAATTTCCAT 60.970 55.000 15.58 0.00 35.91 3.41
304 305 1.605165 GTGGGTGCCGGAATTTCCA 60.605 57.895 15.58 0.96 35.91 3.53
305 306 2.348104 GGTGGGTGCCGGAATTTCC 61.348 63.158 5.05 5.28 0.00 3.13
306 307 3.284336 GGTGGGTGCCGGAATTTC 58.716 61.111 5.05 0.00 0.00 2.17
314 315 4.740822 ATGGCTTCGGTGGGTGCC 62.741 66.667 0.00 0.00 45.10 5.01
315 316 3.134127 GATGGCTTCGGTGGGTGC 61.134 66.667 0.00 0.00 0.00 5.01
316 317 2.819595 CGATGGCTTCGGTGGGTG 60.820 66.667 14.35 0.00 44.28 4.61
323 324 8.628348 CTTCAGATGGAATTTCGATGGCTTCG 62.628 46.154 15.83 15.83 41.12 3.79
324 325 3.879295 TCAGATGGAATTTCGATGGCTTC 59.121 43.478 0.00 0.00 0.00 3.86
325 326 3.889815 TCAGATGGAATTTCGATGGCTT 58.110 40.909 0.00 0.00 0.00 4.35
326 327 3.565764 TCAGATGGAATTTCGATGGCT 57.434 42.857 0.00 0.00 0.00 4.75
327 328 3.549625 GCTTCAGATGGAATTTCGATGGC 60.550 47.826 0.00 0.00 34.32 4.40
328 329 3.004106 GGCTTCAGATGGAATTTCGATGG 59.996 47.826 0.00 0.00 34.32 3.51
329 330 3.881688 AGGCTTCAGATGGAATTTCGATG 59.118 43.478 0.00 0.00 34.32 3.84
330 331 3.881688 CAGGCTTCAGATGGAATTTCGAT 59.118 43.478 0.00 0.00 34.32 3.59
331 332 3.273434 CAGGCTTCAGATGGAATTTCGA 58.727 45.455 0.00 0.00 34.32 3.71
332 333 2.223433 GCAGGCTTCAGATGGAATTTCG 60.223 50.000 0.00 0.00 34.32 3.46
333 334 3.022406 AGCAGGCTTCAGATGGAATTTC 58.978 45.455 0.00 0.00 34.32 2.17
334 335 3.097342 AGCAGGCTTCAGATGGAATTT 57.903 42.857 0.00 0.00 34.32 1.82
335 336 2.822707 AGCAGGCTTCAGATGGAATT 57.177 45.000 0.00 0.00 34.32 2.17
336 337 2.822707 AAGCAGGCTTCAGATGGAAT 57.177 45.000 0.00 0.00 34.32 3.01
337 338 2.677902 CGTAAGCAGGCTTCAGATGGAA 60.678 50.000 10.21 0.00 37.47 3.53
338 339 1.134699 CGTAAGCAGGCTTCAGATGGA 60.135 52.381 10.21 0.00 37.47 3.41
339 340 1.293924 CGTAAGCAGGCTTCAGATGG 58.706 55.000 10.21 0.00 37.47 3.51
340 341 1.293924 CCGTAAGCAGGCTTCAGATG 58.706 55.000 10.21 0.00 37.47 2.90
341 342 3.768633 CCGTAAGCAGGCTTCAGAT 57.231 52.632 10.21 0.00 37.47 2.90
352 353 1.065102 TGTACTCGATCTGCCGTAAGC 59.935 52.381 0.00 0.00 44.14 3.09
353 354 3.627732 ATGTACTCGATCTGCCGTAAG 57.372 47.619 0.00 0.00 0.00 2.34
354 355 3.878699 TGTATGTACTCGATCTGCCGTAA 59.121 43.478 0.00 0.00 0.00 3.18
355 356 3.469739 TGTATGTACTCGATCTGCCGTA 58.530 45.455 0.00 0.00 0.00 4.02
356 357 2.294979 TGTATGTACTCGATCTGCCGT 58.705 47.619 0.00 0.00 0.00 5.68
357 358 3.560902 ATGTATGTACTCGATCTGCCG 57.439 47.619 0.00 0.00 0.00 5.69
358 359 7.323049 AGTATATGTATGTACTCGATCTGCC 57.677 40.000 0.00 0.00 30.17 4.85
359 360 7.411274 GGAGTATATGTATGTACTCGATCTGC 58.589 42.308 17.15 4.66 46.30 4.26
360 361 7.771361 AGGGAGTATATGTATGTACTCGATCTG 59.229 40.741 17.15 0.00 46.30 2.90
361 362 7.863722 AGGGAGTATATGTATGTACTCGATCT 58.136 38.462 17.15 13.09 46.30 2.75
362 363 7.227116 GGAGGGAGTATATGTATGTACTCGATC 59.773 44.444 17.15 16.28 46.30 3.69
363 364 7.055378 GGAGGGAGTATATGTATGTACTCGAT 58.945 42.308 17.15 11.04 46.30 3.59
364 365 6.413052 GGAGGGAGTATATGTATGTACTCGA 58.587 44.000 17.15 0.00 46.30 4.04
365 366 5.293814 CGGAGGGAGTATATGTATGTACTCG 59.706 48.000 17.15 7.26 46.30 4.18
366 367 6.179040 ACGGAGGGAGTATATGTATGTACTC 58.821 44.000 16.09 16.09 45.30 2.59
367 368 6.137104 ACGGAGGGAGTATATGTATGTACT 57.863 41.667 1.54 1.54 37.41 2.73
368 369 6.830873 AACGGAGGGAGTATATGTATGTAC 57.169 41.667 0.00 0.00 0.00 2.90
369 370 7.236529 AGAAACGGAGGGAGTATATGTATGTA 58.763 38.462 0.00 0.00 0.00 2.29
370 371 6.075984 AGAAACGGAGGGAGTATATGTATGT 58.924 40.000 0.00 0.00 0.00 2.29
371 372 6.591750 AGAAACGGAGGGAGTATATGTATG 57.408 41.667 0.00 0.00 0.00 2.39
372 373 8.716674 TTTAGAAACGGAGGGAGTATATGTAT 57.283 34.615 0.00 0.00 0.00 2.29
373 374 8.716674 ATTTAGAAACGGAGGGAGTATATGTA 57.283 34.615 0.00 0.00 0.00 2.29
374 375 7.613551 ATTTAGAAACGGAGGGAGTATATGT 57.386 36.000 0.00 0.00 0.00 2.29
375 376 8.582437 TGTATTTAGAAACGGAGGGAGTATATG 58.418 37.037 0.00 0.00 0.00 1.78
376 377 8.716674 TGTATTTAGAAACGGAGGGAGTATAT 57.283 34.615 0.00 0.00 0.00 0.86
377 378 8.537728 TTGTATTTAGAAACGGAGGGAGTATA 57.462 34.615 0.00 0.00 0.00 1.47
378 379 7.125356 ACTTGTATTTAGAAACGGAGGGAGTAT 59.875 37.037 0.00 0.00 0.00 2.12
379 380 6.438425 ACTTGTATTTAGAAACGGAGGGAGTA 59.562 38.462 0.00 0.00 0.00 2.59
380 381 5.247792 ACTTGTATTTAGAAACGGAGGGAGT 59.752 40.000 0.00 0.00 0.00 3.85
381 382 5.731591 ACTTGTATTTAGAAACGGAGGGAG 58.268 41.667 0.00 0.00 0.00 4.30
382 383 5.337813 GGACTTGTATTTAGAAACGGAGGGA 60.338 44.000 0.00 0.00 0.00 4.20
383 384 4.874396 GGACTTGTATTTAGAAACGGAGGG 59.126 45.833 0.00 0.00 0.00 4.30
384 385 5.731591 AGGACTTGTATTTAGAAACGGAGG 58.268 41.667 0.00 0.00 0.00 4.30
385 386 7.668525 AAAGGACTTGTATTTAGAAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
386 387 8.454570 AAAAAGGACTTGTATTTAGAAACGGA 57.545 30.769 0.00 0.00 0.00 4.69
387 388 9.821662 CTAAAAAGGACTTGTATTTAGAAACGG 57.178 33.333 8.17 0.00 36.25 4.44
388 389 9.821662 CCTAAAAAGGACTTGTATTTAGAAACG 57.178 33.333 12.77 0.00 36.25 3.60
395 396 9.374711 TGAAATCCCTAAAAAGGACTTGTATTT 57.625 29.630 0.00 0.00 35.85 1.40
396 397 8.950007 TGAAATCCCTAAAAAGGACTTGTATT 57.050 30.769 0.00 0.00 35.85 1.89
397 398 8.950007 TTGAAATCCCTAAAAAGGACTTGTAT 57.050 30.769 0.00 0.00 35.85 2.29
398 399 8.950007 ATTGAAATCCCTAAAAAGGACTTGTA 57.050 30.769 0.00 0.00 35.85 2.41
399 400 7.855784 ATTGAAATCCCTAAAAAGGACTTGT 57.144 32.000 0.00 0.00 35.85 3.16
402 403 9.822727 TCTTTATTGAAATCCCTAAAAAGGACT 57.177 29.630 0.00 0.00 35.85 3.85
403 404 9.856488 GTCTTTATTGAAATCCCTAAAAAGGAC 57.144 33.333 0.00 0.00 35.85 3.85
404 405 9.822727 AGTCTTTATTGAAATCCCTAAAAAGGA 57.177 29.630 0.00 0.00 37.93 3.36
412 413 9.838339 CTGTATGTAGTCTTTATTGAAATCCCT 57.162 33.333 0.00 0.00 0.00 4.20
413 414 9.832445 TCTGTATGTAGTCTTTATTGAAATCCC 57.168 33.333 0.00 0.00 0.00 3.85
434 435 9.783081 TCTAAACCGTGTCTATATACATCTGTA 57.217 33.333 0.00 0.00 34.67 2.74
435 436 8.687292 TCTAAACCGTGTCTATATACATCTGT 57.313 34.615 0.00 0.00 0.00 3.41
438 439 9.909644 ACATTCTAAACCGTGTCTATATACATC 57.090 33.333 0.00 0.00 0.00 3.06
445 446 8.692710 TGAATCTACATTCTAAACCGTGTCTAT 58.307 33.333 0.00 0.00 39.49 1.98
446 447 8.058667 TGAATCTACATTCTAAACCGTGTCTA 57.941 34.615 0.00 0.00 39.49 2.59
447 448 6.931838 TGAATCTACATTCTAAACCGTGTCT 58.068 36.000 0.00 0.00 39.49 3.41
448 449 7.591006 TTGAATCTACATTCTAAACCGTGTC 57.409 36.000 0.00 0.00 39.49 3.67
449 450 7.822334 TGATTGAATCTACATTCTAAACCGTGT 59.178 33.333 6.73 0.00 39.49 4.49
450 451 8.196802 TGATTGAATCTACATTCTAAACCGTG 57.803 34.615 6.73 0.00 39.49 4.94
451 452 8.964476 ATGATTGAATCTACATTCTAAACCGT 57.036 30.769 6.73 0.00 39.49 4.83
458 459 8.411683 GGAGCAAAATGATTGAATCTACATTCT 58.588 33.333 6.73 0.00 39.49 2.40
459 460 7.377928 CGGAGCAAAATGATTGAATCTACATTC 59.622 37.037 6.73 0.00 39.24 2.67
460 461 7.148018 ACGGAGCAAAATGATTGAATCTACATT 60.148 33.333 6.73 0.00 34.99 2.71
461 462 6.319658 ACGGAGCAAAATGATTGAATCTACAT 59.680 34.615 6.73 0.00 0.00 2.29
462 463 5.647658 ACGGAGCAAAATGATTGAATCTACA 59.352 36.000 6.73 0.00 0.00 2.74
463 464 6.124088 ACGGAGCAAAATGATTGAATCTAC 57.876 37.500 6.73 0.00 0.00 2.59
464 465 7.498900 ACATACGGAGCAAAATGATTGAATCTA 59.501 33.333 6.73 0.00 0.00 1.98
465 466 6.319658 ACATACGGAGCAAAATGATTGAATCT 59.680 34.615 6.73 0.00 0.00 2.40
466 467 6.498304 ACATACGGAGCAAAATGATTGAATC 58.502 36.000 0.00 0.00 0.00 2.52
467 468 6.455360 ACATACGGAGCAAAATGATTGAAT 57.545 33.333 0.00 0.00 0.00 2.57
468 469 5.895636 ACATACGGAGCAAAATGATTGAA 57.104 34.783 0.00 0.00 0.00 2.69
469 470 6.112734 ACTACATACGGAGCAAAATGATTGA 58.887 36.000 0.00 0.00 0.00 2.57
470 471 6.363577 ACTACATACGGAGCAAAATGATTG 57.636 37.500 0.00 0.00 0.00 2.67
471 472 7.094377 ACAAACTACATACGGAGCAAAATGATT 60.094 33.333 0.00 0.00 0.00 2.57
472 473 6.374333 ACAAACTACATACGGAGCAAAATGAT 59.626 34.615 0.00 0.00 0.00 2.45
473 474 5.703592 ACAAACTACATACGGAGCAAAATGA 59.296 36.000 0.00 0.00 0.00 2.57
474 475 5.938322 ACAAACTACATACGGAGCAAAATG 58.062 37.500 0.00 0.00 0.00 2.32
475 476 7.859325 ATACAAACTACATACGGAGCAAAAT 57.141 32.000 0.00 0.00 0.00 1.82
476 477 7.388224 TCAATACAAACTACATACGGAGCAAAA 59.612 33.333 0.00 0.00 0.00 2.44
477 478 6.874664 TCAATACAAACTACATACGGAGCAAA 59.125 34.615 0.00 0.00 0.00 3.68
478 479 6.399743 TCAATACAAACTACATACGGAGCAA 58.600 36.000 0.00 0.00 0.00 3.91
479 480 5.968254 TCAATACAAACTACATACGGAGCA 58.032 37.500 0.00 0.00 0.00 4.26
480 481 6.897259 TTCAATACAAACTACATACGGAGC 57.103 37.500 0.00 0.00 0.00 4.70
511 512 8.981659 CCCTCCATTCCTAAATACAAATCTTTT 58.018 33.333 0.00 0.00 0.00 2.27
512 513 7.069950 GCCCTCCATTCCTAAATACAAATCTTT 59.930 37.037 0.00 0.00 0.00 2.52
513 514 6.551227 GCCCTCCATTCCTAAATACAAATCTT 59.449 38.462 0.00 0.00 0.00 2.40
514 515 6.071320 GCCCTCCATTCCTAAATACAAATCT 58.929 40.000 0.00 0.00 0.00 2.40
515 516 5.048713 CGCCCTCCATTCCTAAATACAAATC 60.049 44.000 0.00 0.00 0.00 2.17
516 517 4.827284 CGCCCTCCATTCCTAAATACAAAT 59.173 41.667 0.00 0.00 0.00 2.32
517 518 4.204012 CGCCCTCCATTCCTAAATACAAA 58.796 43.478 0.00 0.00 0.00 2.83
518 519 3.201266 ACGCCCTCCATTCCTAAATACAA 59.799 43.478 0.00 0.00 0.00 2.41
519 520 2.775384 ACGCCCTCCATTCCTAAATACA 59.225 45.455 0.00 0.00 0.00 2.29
520 521 3.487120 ACGCCCTCCATTCCTAAATAC 57.513 47.619 0.00 0.00 0.00 1.89
521 522 4.485875 TCTACGCCCTCCATTCCTAAATA 58.514 43.478 0.00 0.00 0.00 1.40
522 523 3.314693 TCTACGCCCTCCATTCCTAAAT 58.685 45.455 0.00 0.00 0.00 1.40
523 524 2.754465 TCTACGCCCTCCATTCCTAAA 58.246 47.619 0.00 0.00 0.00 1.85
524 525 2.464796 TCTACGCCCTCCATTCCTAA 57.535 50.000 0.00 0.00 0.00 2.69
525 526 2.464796 TTCTACGCCCTCCATTCCTA 57.535 50.000 0.00 0.00 0.00 2.94
526 527 1.580059 TTTCTACGCCCTCCATTCCT 58.420 50.000 0.00 0.00 0.00 3.36
527 528 2.093128 TCTTTTCTACGCCCTCCATTCC 60.093 50.000 0.00 0.00 0.00 3.01
528 529 3.261981 TCTTTTCTACGCCCTCCATTC 57.738 47.619 0.00 0.00 0.00 2.67
529 530 3.263425 TCTTCTTTTCTACGCCCTCCATT 59.737 43.478 0.00 0.00 0.00 3.16
530 531 2.838202 TCTTCTTTTCTACGCCCTCCAT 59.162 45.455 0.00 0.00 0.00 3.41
531 532 2.253610 TCTTCTTTTCTACGCCCTCCA 58.746 47.619 0.00 0.00 0.00 3.86
538 539 6.743575 ATGGACCAATTCTTCTTTTCTACG 57.256 37.500 0.00 0.00 0.00 3.51
582 583 4.382362 CCAAGAGCCCATTTCATTTTCTCC 60.382 45.833 0.00 0.00 0.00 3.71
610 611 1.152777 CCACCTTGGCAAGTCACCA 60.153 57.895 24.57 0.00 34.65 4.17
611 612 0.251341 ATCCACCTTGGCAAGTCACC 60.251 55.000 24.57 0.00 37.47 4.02
612 613 2.489938 TATCCACCTTGGCAAGTCAC 57.510 50.000 24.57 0.00 37.47 3.67
666 668 3.012518 CTCTCAAACATGGGTGTGGATC 58.987 50.000 0.00 0.00 38.92 3.36
674 676 3.221771 TCAACCAACTCTCAAACATGGG 58.778 45.455 0.00 0.00 35.44 4.00
676 678 5.240183 ACATCTCAACCAACTCTCAAACATG 59.760 40.000 0.00 0.00 0.00 3.21
678 680 4.780815 ACATCTCAACCAACTCTCAAACA 58.219 39.130 0.00 0.00 0.00 2.83
679 681 5.506317 CCAACATCTCAACCAACTCTCAAAC 60.506 44.000 0.00 0.00 0.00 2.93
681 683 4.136796 CCAACATCTCAACCAACTCTCAA 58.863 43.478 0.00 0.00 0.00 3.02
682 684 3.496692 CCCAACATCTCAACCAACTCTCA 60.497 47.826 0.00 0.00 0.00 3.27
703 705 7.330454 GCAAGTTAGTTGAGTAGTTAGTTACCC 59.670 40.741 3.69 0.00 38.60 3.69
842 855 0.613260 TCGTTGAACTCCTCCATGGG 59.387 55.000 13.02 2.26 36.20 4.00
880 893 4.535692 AGGCAAGAAGAAGAAGAGGAAGAT 59.464 41.667 0.00 0.00 0.00 2.40
881 894 3.906846 AGGCAAGAAGAAGAAGAGGAAGA 59.093 43.478 0.00 0.00 0.00 2.87
882 895 4.284829 AGGCAAGAAGAAGAAGAGGAAG 57.715 45.455 0.00 0.00 0.00 3.46
886 899 4.083377 GCTGAAAGGCAAGAAGAAGAAGAG 60.083 45.833 0.00 0.00 0.00 2.85
900 913 2.075338 CAGAGAGTTGAGCTGAAAGGC 58.925 52.381 0.00 0.00 0.00 4.35
904 917 1.346062 AGCCAGAGAGTTGAGCTGAA 58.654 50.000 0.00 0.00 31.23 3.02
920 933 1.064621 CACGCATGCATGGTAAGCC 59.935 57.895 27.34 9.08 0.00 4.35
921 934 4.696078 CACGCATGCATGGTAAGC 57.304 55.556 27.34 12.13 0.00 3.09
957 988 5.120208 GGTGTGCCGTGTATATATAAGCTTG 59.880 44.000 9.86 0.00 0.00 4.01
976 1007 2.997315 TCGGAGGAGCCTGGTGTG 60.997 66.667 0.00 0.00 0.00 3.82
1026 1064 2.851821 TGTGGGAATGGATCAATGGAGA 59.148 45.455 0.00 0.00 0.00 3.71
1056 1094 2.383527 GCGGTCGAGCTCTGTTTGG 61.384 63.158 12.85 0.00 0.00 3.28
1069 1115 1.072505 TGGAGGTTTCTTGGCGGTC 59.927 57.895 0.00 0.00 0.00 4.79
1097 1161 0.915364 ATCTCCCTCTTCTTGGTGGC 59.085 55.000 0.00 0.00 0.00 5.01
1711 1793 3.309582 CCTTCGGGCTTAGCAGGA 58.690 61.111 6.53 0.00 0.00 3.86
1721 1803 0.248866 GTGTTGTTGTTGCCTTCGGG 60.249 55.000 0.00 0.00 38.37 5.14
1722 1804 0.591236 CGTGTTGTTGTTGCCTTCGG 60.591 55.000 0.00 0.00 0.00 4.30
1723 1805 0.098025 ACGTGTTGTTGTTGCCTTCG 59.902 50.000 0.00 0.00 0.00 3.79
1724 1806 2.271821 AACGTGTTGTTGTTGCCTTC 57.728 45.000 0.00 0.00 40.00 3.46
1774 1856 3.678717 CTTCGCCGGTGTCGTCGAT 62.679 63.158 16.01 0.00 45.87 3.59
1775 1857 4.394078 CTTCGCCGGTGTCGTCGA 62.394 66.667 16.01 5.06 44.95 4.20
1818 1900 2.159114 GGAGAAGTAGAAGCAGCAGGAG 60.159 54.545 0.00 0.00 0.00 3.69
1819 1901 1.827969 GGAGAAGTAGAAGCAGCAGGA 59.172 52.381 0.00 0.00 0.00 3.86
1820 1902 1.470632 CGGAGAAGTAGAAGCAGCAGG 60.471 57.143 0.00 0.00 0.00 4.85
1823 1905 0.808060 GCCGGAGAAGTAGAAGCAGC 60.808 60.000 5.05 0.00 0.00 5.25
1829 1911 2.044252 AGCCGCCGGAGAAGTAGA 60.044 61.111 7.68 0.00 0.00 2.59
1832 1914 4.070552 GACAGCCGCCGGAGAAGT 62.071 66.667 7.68 0.28 0.00 3.01
1849 1931 0.318699 TGCTCGTCTTCACGTTCTGG 60.319 55.000 0.00 0.00 46.76 3.86
1900 1982 0.895530 CTCCCTTCTTCGCTACCACA 59.104 55.000 0.00 0.00 0.00 4.17
1906 1988 2.574399 GTCGCTCCCTTCTTCGCT 59.426 61.111 0.00 0.00 0.00 4.93
1908 1990 2.202623 CCGTCGCTCCCTTCTTCG 60.203 66.667 0.00 0.00 0.00 3.79
1984 2066 1.296715 GAGGACCATGCTGAACGGT 59.703 57.895 0.00 0.00 35.12 4.83
1997 2079 1.298014 CCCTTGAGTGCCTGAGGAC 59.702 63.158 0.65 0.00 0.00 3.85
2011 2093 0.467384 CTCATCTGATGACGGCCCTT 59.533 55.000 16.06 0.00 35.06 3.95
2058 2145 3.346315 TGTGCAATAATCAGTGGTGAGG 58.654 45.455 0.00 0.00 35.66 3.86
2104 2191 5.695851 ATATGAGTGAATTTGGGCGAATC 57.304 39.130 0.00 0.00 0.00 2.52
2109 2196 4.757594 TGCAAATATGAGTGAATTTGGGC 58.242 39.130 9.18 0.00 41.35 5.36
2113 2200 8.533657 TGAAGGAATGCAAATATGAGTGAATTT 58.466 29.630 0.00 0.00 0.00 1.82
2120 2207 9.542462 AAATGAATGAAGGAATGCAAATATGAG 57.458 29.630 0.00 0.00 0.00 2.90
2172 2284 2.806244 CTGTCAAACTAAACCTGGGTCG 59.194 50.000 0.00 0.00 0.00 4.79
2176 2288 4.037923 ACATTGCTGTCAAACTAAACCTGG 59.962 41.667 0.00 0.00 35.56 4.45
2215 2327 8.394971 ACTGTCTTTTTACAACATGATGATGA 57.605 30.769 10.29 0.00 33.36 2.92
2279 2394 5.407502 GCCTCTTTTGTACAACAACAGTTT 58.592 37.500 8.07 0.00 37.90 2.66
2282 2397 3.243401 GGGCCTCTTTTGTACAACAACAG 60.243 47.826 8.07 2.59 37.90 3.16
2283 2398 2.691011 GGGCCTCTTTTGTACAACAACA 59.309 45.455 8.07 0.00 37.90 3.33
2284 2399 2.956333 AGGGCCTCTTTTGTACAACAAC 59.044 45.455 8.07 0.00 37.90 3.32
2295 2410 2.982026 GGCAAATGAGGGCCTCTTT 58.018 52.632 32.28 28.28 46.74 2.52
2336 2453 6.986250 AGAACAAGAAACCCAGAAATGAATC 58.014 36.000 0.00 0.00 0.00 2.52
2428 2545 7.588497 ATTCTTATTGTAGGAATCAAAGGGC 57.412 36.000 0.00 0.00 29.67 5.19
2469 2588 5.401550 TGTGTTCTTTGTTCTTGCTTCTTG 58.598 37.500 0.00 0.00 0.00 3.02
2470 2589 5.643379 TGTGTTCTTTGTTCTTGCTTCTT 57.357 34.783 0.00 0.00 0.00 2.52
2471 2590 5.643379 TTGTGTTCTTTGTTCTTGCTTCT 57.357 34.783 0.00 0.00 0.00 2.85
2483 2602 7.500141 ACAATTGCCTCTAATTTGTGTTCTTT 58.500 30.769 5.05 0.00 0.00 2.52
2656 2784 9.159254 TCATACAGTCCATCTGAATAACCTAAT 57.841 33.333 1.79 0.00 46.27 1.73
2669 2798 5.762218 CCAGGAAGAAATCATACAGTCCATC 59.238 44.000 0.00 0.00 0.00 3.51
2762 3101 5.235305 TGTTCTTGTTCTTGTTCTTGCTC 57.765 39.130 0.00 0.00 0.00 4.26
2912 3629 4.757657 AGTTTTGTTTTGTTTGGTCCCAAC 59.242 37.500 0.00 0.00 35.46 3.77
2990 3707 2.353323 TGCTGATGCTGCTCTAAGTTG 58.647 47.619 0.00 0.00 40.48 3.16
2991 3708 2.775911 TGCTGATGCTGCTCTAAGTT 57.224 45.000 0.00 0.00 40.48 2.66
2992 3709 2.169978 TGATGCTGATGCTGCTCTAAGT 59.830 45.455 0.00 0.00 40.48 2.24
2993 3710 2.803386 CTGATGCTGATGCTGCTCTAAG 59.197 50.000 0.00 0.00 40.48 2.18
2994 3711 2.835027 CTGATGCTGATGCTGCTCTAA 58.165 47.619 0.00 0.00 40.48 2.10
2995 3712 1.540580 GCTGATGCTGATGCTGCTCTA 60.541 52.381 0.00 0.00 40.48 2.43
2996 3713 0.816018 GCTGATGCTGATGCTGCTCT 60.816 55.000 0.00 0.00 40.48 4.09
2997 3714 1.649815 GCTGATGCTGATGCTGCTC 59.350 57.895 0.00 0.00 40.48 4.26
2998 3715 3.829048 GCTGATGCTGATGCTGCT 58.171 55.556 0.00 0.00 40.48 4.24
3019 3736 4.346418 TGTTGCCCTTTGGATGTTTATTGT 59.654 37.500 0.00 0.00 0.00 2.71
3023 3740 4.219115 TCTTGTTGCCCTTTGGATGTTTA 58.781 39.130 0.00 0.00 0.00 2.01
3046 3768 4.141846 TGTTGTTGGCCAAGATTTTAGCAA 60.142 37.500 21.21 13.94 32.51 3.91
3048 3770 3.740832 GTGTTGTTGGCCAAGATTTTAGC 59.259 43.478 21.21 4.81 32.51 3.09
3049 3771 5.200368 AGTGTTGTTGGCCAAGATTTTAG 57.800 39.130 21.21 0.00 32.51 1.85
3050 3772 5.606348 AAGTGTTGTTGGCCAAGATTTTA 57.394 34.783 21.21 0.00 32.51 1.52
3051 3773 4.486125 AAGTGTTGTTGGCCAAGATTTT 57.514 36.364 21.21 6.99 32.51 1.82
3053 3775 4.501400 GCTAAAGTGTTGTTGGCCAAGATT 60.501 41.667 21.21 11.04 32.51 2.40
3054 3776 3.005791 GCTAAAGTGTTGTTGGCCAAGAT 59.994 43.478 21.21 3.62 32.51 2.40
3074 3797 5.181748 CCTTGCTAACATCTAGTTGAAGCT 58.818 41.667 22.04 0.00 40.73 3.74
3075 3798 4.201861 GCCTTGCTAACATCTAGTTGAAGC 60.202 45.833 18.14 18.14 41.50 3.86
3076 3799 4.333926 GGCCTTGCTAACATCTAGTTGAAG 59.666 45.833 7.81 5.86 41.50 3.02
3082 3805 3.118629 TGTCTGGCCTTGCTAACATCTAG 60.119 47.826 3.32 0.00 0.00 2.43
3083 3806 2.837591 TGTCTGGCCTTGCTAACATCTA 59.162 45.455 3.32 0.00 0.00 1.98
3089 3812 2.656947 ACTTTGTCTGGCCTTGCTAA 57.343 45.000 3.32 0.00 0.00 3.09
3124 3847 5.319453 ACCAAGAGATTGACAATCATGTGT 58.681 37.500 26.05 17.53 40.74 3.72
3129 3852 5.375773 TGTTGACCAAGAGATTGACAATCA 58.624 37.500 26.05 5.48 40.42 2.57
3147 3870 5.826601 TGTAGCAAATGAAGTGTTGTTGA 57.173 34.783 0.00 0.00 0.00 3.18
3157 3880 7.067615 TGTTAACCTCTTGTTGTAGCAAATGAA 59.932 33.333 2.48 0.00 37.83 2.57
3171 3894 4.338118 TGTCTGGCTTTTGTTAACCTCTTG 59.662 41.667 2.48 0.00 0.00 3.02
3183 3906 4.892934 TGAATTGTACCTTGTCTGGCTTTT 59.107 37.500 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.