Multiple sequence alignment - TraesCS1B01G003400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G003400 | chr1B | 100.000 | 3158 | 0 | 0 | 1 | 3158 | 2111187 | 2108030 | 0.000000e+00 | 5832.0 |
1 | TraesCS1B01G003400 | chr1B | 94.323 | 1286 | 66 | 5 | 1218 | 2497 | 2064587 | 2063303 | 0.000000e+00 | 1964.0 |
2 | TraesCS1B01G003400 | chr1B | 94.163 | 1285 | 69 | 4 | 1218 | 2497 | 2087214 | 2085931 | 0.000000e+00 | 1953.0 |
3 | TraesCS1B01G003400 | chr1B | 90.887 | 1229 | 76 | 8 | 1 | 1203 | 2088416 | 2087198 | 0.000000e+00 | 1616.0 |
4 | TraesCS1B01G003400 | chr1B | 90.992 | 1210 | 73 | 9 | 20 | 1203 | 2065770 | 2064571 | 0.000000e+00 | 1598.0 |
5 | TraesCS1B01G003400 | chr1B | 80.118 | 679 | 114 | 18 | 1225 | 1896 | 2307585 | 2306921 | 1.320000e-133 | 486.0 |
6 | TraesCS1B01G003400 | chr1B | 94.534 | 311 | 16 | 1 | 2848 | 3158 | 2085935 | 2085626 | 2.200000e-131 | 479.0 |
7 | TraesCS1B01G003400 | chr1B | 94.212 | 311 | 17 | 1 | 2848 | 3158 | 2063307 | 2062998 | 1.030000e-129 | 473.0 |
8 | TraesCS1B01G003400 | chr1A | 87.203 | 1305 | 132 | 19 | 1219 | 2497 | 1657308 | 1658603 | 0.000000e+00 | 1452.0 |
9 | TraesCS1B01G003400 | chr1A | 82.125 | 1007 | 103 | 26 | 252 | 1203 | 1656339 | 1657323 | 0.000000e+00 | 791.0 |
10 | TraesCS1B01G003400 | chr1A | 84.123 | 359 | 55 | 1 | 1221 | 1577 | 2391690 | 2392048 | 2.330000e-91 | 346.0 |
11 | TraesCS1B01G003400 | chr1A | 83.713 | 307 | 41 | 8 | 2847 | 3148 | 1658598 | 1658900 | 6.670000e-72 | 281.0 |
12 | TraesCS1B01G003400 | chr6D | 93.855 | 358 | 22 | 0 | 2495 | 2852 | 25849675 | 25849318 | 9.970000e-150 | 540.0 |
13 | TraesCS1B01G003400 | chr3A | 79.301 | 744 | 134 | 15 | 1224 | 1963 | 737797208 | 737797935 | 1.310000e-138 | 503.0 |
14 | TraesCS1B01G003400 | chr3A | 80.335 | 239 | 42 | 4 | 950 | 1184 | 737796964 | 737797201 | 3.240000e-40 | 176.0 |
15 | TraesCS1B01G003400 | chr3B | 83.204 | 387 | 57 | 5 | 1224 | 1604 | 815476710 | 815477094 | 6.480000e-92 | 348.0 |
16 | TraesCS1B01G003400 | chr3B | 82.164 | 342 | 55 | 5 | 1241 | 1578 | 801304672 | 801305011 | 3.990000e-74 | 289.0 |
17 | TraesCS1B01G003400 | chr3B | 79.835 | 243 | 43 | 4 | 950 | 1187 | 815476464 | 815476705 | 4.190000e-39 | 172.0 |
18 | TraesCS1B01G003400 | chr3D | 82.451 | 359 | 59 | 3 | 1229 | 1584 | 596671567 | 596671210 | 8.510000e-81 | 311.0 |
19 | TraesCS1B01G003400 | chr2A | 94.578 | 166 | 8 | 1 | 2692 | 2856 | 313773226 | 313773061 | 4.040000e-64 | 255.0 |
20 | TraesCS1B01G003400 | chr2A | 92.857 | 126 | 8 | 1 | 2496 | 2621 | 313773367 | 313773243 | 6.960000e-42 | 182.0 |
21 | TraesCS1B01G003400 | chr5A | 85.802 | 162 | 16 | 5 | 2685 | 2842 | 555335198 | 555335040 | 7.010000e-37 | 165.0 |
22 | TraesCS1B01G003400 | chr2B | 77.844 | 167 | 36 | 1 | 1732 | 1898 | 40908446 | 40908281 | 5.570000e-18 | 102.0 |
23 | TraesCS1B01G003400 | chr2B | 100.000 | 29 | 0 | 0 | 2824 | 2852 | 439899570 | 439899542 | 2.000000e-03 | 54.7 |
24 | TraesCS1B01G003400 | chr2D | 77.246 | 167 | 37 | 1 | 1732 | 1898 | 25175622 | 25175457 | 2.590000e-16 | 97.1 |
25 | TraesCS1B01G003400 | chr4B | 76.374 | 182 | 33 | 7 | 2058 | 2237 | 604001938 | 604002111 | 4.340000e-14 | 89.8 |
26 | TraesCS1B01G003400 | chr5B | 90.909 | 44 | 2 | 2 | 2817 | 2859 | 605788149 | 605788107 | 1.220000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G003400 | chr1B | 2108030 | 2111187 | 3157 | True | 5832.000000 | 5832 | 100.000000 | 1 | 3158 | 1 | chr1B.!!$R1 | 3157 |
1 | TraesCS1B01G003400 | chr1B | 2085626 | 2088416 | 2790 | True | 1349.333333 | 1953 | 93.194667 | 1 | 3158 | 3 | chr1B.!!$R4 | 3157 |
2 | TraesCS1B01G003400 | chr1B | 2062998 | 2065770 | 2772 | True | 1345.000000 | 1964 | 93.175667 | 20 | 3158 | 3 | chr1B.!!$R3 | 3138 |
3 | TraesCS1B01G003400 | chr1B | 2306921 | 2307585 | 664 | True | 486.000000 | 486 | 80.118000 | 1225 | 1896 | 1 | chr1B.!!$R2 | 671 |
4 | TraesCS1B01G003400 | chr1A | 1656339 | 1658900 | 2561 | False | 841.333333 | 1452 | 84.347000 | 252 | 3148 | 3 | chr1A.!!$F2 | 2896 |
5 | TraesCS1B01G003400 | chr3A | 737796964 | 737797935 | 971 | False | 339.500000 | 503 | 79.818000 | 950 | 1963 | 2 | chr3A.!!$F1 | 1013 |
6 | TraesCS1B01G003400 | chr3B | 815476464 | 815477094 | 630 | False | 260.000000 | 348 | 81.519500 | 950 | 1604 | 2 | chr3B.!!$F2 | 654 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
435 | 439 | 0.179171 | CACTCGCTACCATTCGTCGT | 60.179 | 55.0 | 0.0 | 0.0 | 0.0 | 4.34 | F |
1746 | 1843 | 0.396435 | TTGCGGACTTCACTGGACAT | 59.604 | 50.0 | 0.0 | 0.0 | 0.0 | 3.06 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1999 | 2096 | 0.464373 | CCCCTGCACAATAGATGCGT | 60.464 | 55.0 | 0.00 | 0.00 | 46.49 | 5.24 | R |
2686 | 2787 | 0.035247 | TACTCATGTGCATGCAGCCA | 60.035 | 50.0 | 23.41 | 17.37 | 44.83 | 4.75 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
84 | 85 | 4.911053 | TGCACGACTAAAATTTCGTTTGT | 58.089 | 34.783 | 0.26 | 0.00 | 46.04 | 2.83 |
89 | 90 | 7.317177 | CACGACTAAAATTTCGTTTGTCAAAC | 58.683 | 34.615 | 16.99 | 16.99 | 46.04 | 2.93 |
98 | 99 | 8.496872 | AATTTCGTTTGTCAAACTAATTACCG | 57.503 | 30.769 | 22.69 | 9.84 | 39.23 | 4.02 |
124 | 125 | 9.099454 | GAGACACACAATTATAAACTAGAAGGG | 57.901 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
134 | 135 | 4.453177 | AAACTAGAAGGGAGTTAGTCGC | 57.547 | 45.455 | 0.00 | 0.00 | 36.10 | 5.19 |
141 | 142 | 0.971447 | GGGAGTTAGTCGCTGTCCCT | 60.971 | 60.000 | 12.45 | 0.00 | 43.28 | 4.20 |
142 | 143 | 0.456628 | GGAGTTAGTCGCTGTCCCTC | 59.543 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
180 | 181 | 5.328691 | CAGTAAGCTCTGAGTAAGAAGTCG | 58.671 | 45.833 | 6.53 | 0.00 | 37.61 | 4.18 |
255 | 256 | 7.881775 | ACTTGTGCTAGGAAATTAATTAGGG | 57.118 | 36.000 | 0.01 | 0.00 | 0.00 | 3.53 |
256 | 257 | 7.410991 | ACTTGTGCTAGGAAATTAATTAGGGT | 58.589 | 34.615 | 0.01 | 0.00 | 0.00 | 4.34 |
433 | 437 | 2.288969 | GCACTCGCTACCATTCGTC | 58.711 | 57.895 | 0.00 | 0.00 | 34.30 | 4.20 |
435 | 439 | 0.179171 | CACTCGCTACCATTCGTCGT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
437 | 441 | 0.924363 | CTCGCTACCATTCGTCGTCG | 60.924 | 60.000 | 0.00 | 0.00 | 38.55 | 5.12 |
440 | 444 | 1.432251 | CTACCATTCGTCGTCGGCT | 59.568 | 57.895 | 1.55 | 0.00 | 37.69 | 5.52 |
463 | 467 | 1.404843 | CCGGGTAGAGGAAGAAGAGG | 58.595 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
469 | 473 | 3.383505 | GGTAGAGGAAGAAGAGGAGAAGC | 59.616 | 52.174 | 0.00 | 0.00 | 0.00 | 3.86 |
470 | 474 | 3.473113 | AGAGGAAGAAGAGGAGAAGCT | 57.527 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
487 | 491 | 1.801332 | CTGAGCAGCAGCAACATCC | 59.199 | 57.895 | 3.17 | 0.00 | 45.49 | 3.51 |
540 | 544 | 2.411069 | GGAAAAGCGAAGTCTTCCGTAC | 59.589 | 50.000 | 7.01 | 0.00 | 0.00 | 3.67 |
623 | 654 | 8.790718 | TCACTAGGTAGGCGTTTCTTAATATAG | 58.209 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
694 | 745 | 4.074970 | ACAGCTTGAGAAATCATCCGTTT | 58.925 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
702 | 753 | 6.472887 | TGAGAAATCATCCGTTTTCCTAGTT | 58.527 | 36.000 | 0.00 | 0.00 | 33.18 | 2.24 |
751 | 802 | 1.220749 | GCCTCGCCAGGTAATCACA | 59.779 | 57.895 | 0.00 | 0.00 | 42.74 | 3.58 |
782 | 833 | 4.104738 | TCCTTGACCCAGAAACTTCTTCAT | 59.895 | 41.667 | 0.00 | 0.00 | 34.74 | 2.57 |
783 | 834 | 4.829492 | CCTTGACCCAGAAACTTCTTCATT | 59.171 | 41.667 | 0.00 | 0.00 | 34.74 | 2.57 |
798 | 849 | 8.924511 | ACTTCTTCATTTCTAATTTGTCCTCA | 57.075 | 30.769 | 0.00 | 0.00 | 0.00 | 3.86 |
816 | 867 | 0.530650 | CATTGCCTACGCTCCGTCAT | 60.531 | 55.000 | 0.00 | 0.00 | 41.54 | 3.06 |
821 | 872 | 1.066605 | GCCTACGCTCCGTCATCTTAA | 59.933 | 52.381 | 0.00 | 0.00 | 41.54 | 1.85 |
830 | 881 | 4.462133 | CTCCGTCATCTTAAGGAGGTAGA | 58.538 | 47.826 | 1.85 | 0.00 | 44.78 | 2.59 |
831 | 882 | 4.205587 | TCCGTCATCTTAAGGAGGTAGAC | 58.794 | 47.826 | 1.85 | 2.06 | 0.00 | 2.59 |
846 | 897 | 6.099269 | AGGAGGTAGACTGTGTGTTTCTTTTA | 59.901 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
868 | 919 | 5.695851 | ACTAATCAAAACTGCAACCAGAG | 57.304 | 39.130 | 0.00 | 0.00 | 41.77 | 3.35 |
869 | 920 | 5.133221 | ACTAATCAAAACTGCAACCAGAGT | 58.867 | 37.500 | 0.00 | 0.00 | 41.77 | 3.24 |
932 | 983 | 3.165071 | AGCAAACAACTTTCCCTATGGG | 58.835 | 45.455 | 0.00 | 0.00 | 46.11 | 4.00 |
953 | 1004 | 3.565516 | GAAATGAAGAAGGGCGACAAAC | 58.434 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
1027 | 1083 | 3.990092 | TGCCGATCTATTATCACACCAC | 58.010 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
1110 | 1166 | 8.131100 | TCACTTCTCAAAGAAATCACAAATGAC | 58.869 | 33.333 | 0.00 | 0.00 | 35.47 | 3.06 |
1124 | 1180 | 3.582208 | ACAAATGACTTCTCTCCTGAGCT | 59.418 | 43.478 | 0.00 | 0.00 | 40.03 | 4.09 |
1128 | 1184 | 3.439154 | TGACTTCTCTCCTGAGCTGAAT | 58.561 | 45.455 | 0.00 | 0.00 | 40.03 | 2.57 |
1145 | 1201 | 2.976185 | TGAATATTGGCTCCGGTGGATA | 59.024 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
1192 | 1254 | 1.915489 | TCTGAGCTGCCTTGGGATTTA | 59.085 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
1193 | 1255 | 2.308570 | TCTGAGCTGCCTTGGGATTTAA | 59.691 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
1194 | 1256 | 3.053395 | TCTGAGCTGCCTTGGGATTTAAT | 60.053 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
1195 | 1257 | 3.290710 | TGAGCTGCCTTGGGATTTAATC | 58.709 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
1196 | 1258 | 3.290710 | GAGCTGCCTTGGGATTTAATCA | 58.709 | 45.455 | 7.29 | 0.00 | 0.00 | 2.57 |
1197 | 1259 | 3.701040 | GAGCTGCCTTGGGATTTAATCAA | 59.299 | 43.478 | 7.29 | 0.00 | 0.00 | 2.57 |
1198 | 1260 | 4.095946 | AGCTGCCTTGGGATTTAATCAAA | 58.904 | 39.130 | 7.29 | 0.41 | 0.00 | 2.69 |
1199 | 1261 | 4.081476 | AGCTGCCTTGGGATTTAATCAAAC | 60.081 | 41.667 | 7.29 | 0.00 | 0.00 | 2.93 |
1200 | 1262 | 4.081476 | GCTGCCTTGGGATTTAATCAAACT | 60.081 | 41.667 | 7.29 | 0.00 | 0.00 | 2.66 |
1201 | 1263 | 5.569428 | GCTGCCTTGGGATTTAATCAAACTT | 60.569 | 40.000 | 7.29 | 0.00 | 0.00 | 2.66 |
1202 | 1264 | 6.432403 | TGCCTTGGGATTTAATCAAACTTT | 57.568 | 33.333 | 7.29 | 0.00 | 0.00 | 2.66 |
1203 | 1265 | 6.836242 | TGCCTTGGGATTTAATCAAACTTTT | 58.164 | 32.000 | 7.29 | 0.00 | 0.00 | 2.27 |
1204 | 1266 | 7.286313 | TGCCTTGGGATTTAATCAAACTTTTT | 58.714 | 30.769 | 7.29 | 0.00 | 0.00 | 1.94 |
1270 | 1337 | 3.138884 | TGTTGCTGACAAGGCATCTTA | 57.861 | 42.857 | 0.00 | 0.00 | 39.54 | 2.10 |
1420 | 1487 | 4.210331 | GGTTTCTGGGATATTGTGCTGAT | 58.790 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
1521 | 1588 | 2.176889 | TCCTAAAGGGAGTCTTCGTGG | 58.823 | 52.381 | 0.00 | 0.00 | 39.58 | 4.94 |
1652 | 1735 | 9.832445 | ATCTTCTTTTACATAATGACCACGTAT | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
1746 | 1843 | 0.396435 | TTGCGGACTTCACTGGACAT | 59.604 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1789 | 1886 | 4.772100 | AGGAATTTGTCAGGGGTTACATTG | 59.228 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
1926 | 2023 | 3.680458 | GCAGAGCCAGACTTTTACTGTAC | 59.320 | 47.826 | 0.00 | 0.00 | 34.04 | 2.90 |
2023 | 2120 | 3.254166 | GCATCTATTGTGCAGGGGTTATG | 59.746 | 47.826 | 0.00 | 0.00 | 42.08 | 1.90 |
2040 | 2137 | 2.443887 | ATGTTGCACCAGAATGTTGC | 57.556 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2073 | 2170 | 3.123804 | CACACACCGGCTTGATATCTAC | 58.876 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2119 | 2216 | 1.638529 | ACTGACAGGAGAGAGGTTGG | 58.361 | 55.000 | 7.51 | 0.00 | 0.00 | 3.77 |
2216 | 2315 | 8.515414 | ACCAATACATTACTTGCTTCTCTTTTC | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2389 | 2489 | 9.511144 | CAATAGTTTAAAATACCCGAAATGGTC | 57.489 | 33.333 | 0.00 | 0.00 | 39.91 | 4.02 |
2509 | 2610 | 5.971763 | AGTATATAGTACTACCTCGGTCCG | 58.028 | 45.833 | 4.39 | 4.39 | 0.00 | 4.79 |
2510 | 2611 | 2.557920 | ATAGTACTACCTCGGTCCGG | 57.442 | 55.000 | 12.29 | 0.00 | 0.00 | 5.14 |
2511 | 2612 | 0.469917 | TAGTACTACCTCGGTCCGGG | 59.530 | 60.000 | 12.29 | 8.10 | 0.00 | 5.73 |
2512 | 2613 | 1.077429 | GTACTACCTCGGTCCGGGT | 60.077 | 63.158 | 22.78 | 22.78 | 39.40 | 5.28 |
2513 | 2614 | 0.681243 | GTACTACCTCGGTCCGGGTT | 60.681 | 60.000 | 23.91 | 8.10 | 37.07 | 4.11 |
2514 | 2615 | 0.039618 | TACTACCTCGGTCCGGGTTT | 59.960 | 55.000 | 23.91 | 15.92 | 37.07 | 3.27 |
2515 | 2616 | 0.039618 | ACTACCTCGGTCCGGGTTTA | 59.960 | 55.000 | 23.91 | 9.14 | 37.07 | 2.01 |
2516 | 2617 | 1.185315 | CTACCTCGGTCCGGGTTTAA | 58.815 | 55.000 | 23.91 | 10.06 | 37.07 | 1.52 |
2517 | 2618 | 1.550072 | CTACCTCGGTCCGGGTTTAAA | 59.450 | 52.381 | 23.91 | 9.77 | 37.07 | 1.52 |
2518 | 2619 | 0.322648 | ACCTCGGTCCGGGTTTAAAG | 59.677 | 55.000 | 10.99 | 0.00 | 30.80 | 1.85 |
2519 | 2620 | 0.392060 | CCTCGGTCCGGGTTTAAAGG | 60.392 | 60.000 | 10.99 | 4.39 | 0.00 | 3.11 |
2520 | 2621 | 1.003476 | TCGGTCCGGGTTTAAAGGC | 60.003 | 57.895 | 12.29 | 0.00 | 0.00 | 4.35 |
2521 | 2622 | 2.042259 | CGGTCCGGGTTTAAAGGCC | 61.042 | 63.158 | 2.34 | 0.00 | 0.00 | 5.19 |
2522 | 2623 | 1.679977 | GGTCCGGGTTTAAAGGCCC | 60.680 | 63.158 | 0.00 | 4.15 | 41.45 | 5.80 |
2523 | 2624 | 1.679977 | GTCCGGGTTTAAAGGCCCC | 60.680 | 63.158 | 0.00 | 5.49 | 41.85 | 5.80 |
2524 | 2625 | 2.363276 | CCGGGTTTAAAGGCCCCC | 60.363 | 66.667 | 0.00 | 0.00 | 41.85 | 5.40 |
2538 | 2639 | 3.361977 | CCCCCAGACCAAAACGCG | 61.362 | 66.667 | 3.53 | 3.53 | 0.00 | 6.01 |
2539 | 2640 | 2.593436 | CCCCAGACCAAAACGCGT | 60.593 | 61.111 | 5.58 | 5.58 | 0.00 | 6.01 |
2540 | 2641 | 2.637025 | CCCAGACCAAAACGCGTG | 59.363 | 61.111 | 14.98 | 1.65 | 0.00 | 5.34 |
2541 | 2642 | 2.184167 | CCCAGACCAAAACGCGTGT | 61.184 | 57.895 | 14.98 | 3.14 | 0.00 | 4.49 |
2542 | 2643 | 0.881159 | CCCAGACCAAAACGCGTGTA | 60.881 | 55.000 | 14.98 | 0.00 | 0.00 | 2.90 |
2543 | 2644 | 0.233848 | CCAGACCAAAACGCGTGTAC | 59.766 | 55.000 | 14.98 | 0.00 | 0.00 | 2.90 |
2544 | 2645 | 0.233848 | CAGACCAAAACGCGTGTACC | 59.766 | 55.000 | 14.98 | 0.00 | 0.00 | 3.34 |
2545 | 2646 | 0.179078 | AGACCAAAACGCGTGTACCA | 60.179 | 50.000 | 14.98 | 0.00 | 0.00 | 3.25 |
2546 | 2647 | 0.656785 | GACCAAAACGCGTGTACCAA | 59.343 | 50.000 | 14.98 | 0.00 | 0.00 | 3.67 |
2547 | 2648 | 0.658897 | ACCAAAACGCGTGTACCAAG | 59.341 | 50.000 | 14.98 | 0.39 | 0.00 | 3.61 |
2548 | 2649 | 0.938713 | CCAAAACGCGTGTACCAAGA | 59.061 | 50.000 | 14.98 | 0.00 | 0.00 | 3.02 |
2549 | 2650 | 1.333435 | CCAAAACGCGTGTACCAAGAC | 60.333 | 52.381 | 14.98 | 0.00 | 0.00 | 3.01 |
2550 | 2651 | 0.578211 | AAAACGCGTGTACCAAGACG | 59.422 | 50.000 | 14.98 | 0.00 | 44.68 | 4.18 |
2554 | 2655 | 4.164252 | CGTGTACCAAGACGCCTC | 57.836 | 61.111 | 0.00 | 0.00 | 35.46 | 4.70 |
2555 | 2656 | 1.287815 | CGTGTACCAAGACGCCTCA | 59.712 | 57.895 | 0.00 | 0.00 | 35.46 | 3.86 |
2556 | 2657 | 0.732880 | CGTGTACCAAGACGCCTCAG | 60.733 | 60.000 | 0.00 | 0.00 | 35.46 | 3.35 |
2557 | 2658 | 0.317479 | GTGTACCAAGACGCCTCAGT | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2558 | 2659 | 0.317160 | TGTACCAAGACGCCTCAGTG | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2559 | 2660 | 1.014564 | GTACCAAGACGCCTCAGTGC | 61.015 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2560 | 2661 | 1.468506 | TACCAAGACGCCTCAGTGCA | 61.469 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2561 | 2662 | 1.376424 | CCAAGACGCCTCAGTGCAT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.96 |
2562 | 2663 | 0.108186 | CCAAGACGCCTCAGTGCATA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 |
2563 | 2664 | 1.284657 | CAAGACGCCTCAGTGCATAG | 58.715 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2564 | 2665 | 0.898320 | AAGACGCCTCAGTGCATAGT | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2565 | 2666 | 1.763968 | AGACGCCTCAGTGCATAGTA | 58.236 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2566 | 2667 | 2.100197 | AGACGCCTCAGTGCATAGTAA | 58.900 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2567 | 2668 | 2.695666 | AGACGCCTCAGTGCATAGTAAT | 59.304 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
2568 | 2669 | 3.053455 | GACGCCTCAGTGCATAGTAATC | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2569 | 2670 | 2.695666 | ACGCCTCAGTGCATAGTAATCT | 59.304 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
2570 | 2671 | 3.055591 | CGCCTCAGTGCATAGTAATCTG | 58.944 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2571 | 2672 | 2.805099 | GCCTCAGTGCATAGTAATCTGC | 59.195 | 50.000 | 0.00 | 0.00 | 38.87 | 4.26 |
2572 | 2673 | 3.742327 | GCCTCAGTGCATAGTAATCTGCA | 60.742 | 47.826 | 0.00 | 0.00 | 45.60 | 4.41 |
2586 | 2687 | 2.533266 | TCTGCAAGAGTCTGACCAAC | 57.467 | 50.000 | 3.76 | 0.00 | 38.67 | 3.77 |
2587 | 2688 | 1.070758 | TCTGCAAGAGTCTGACCAACC | 59.929 | 52.381 | 3.76 | 0.00 | 38.67 | 3.77 |
2588 | 2689 | 0.836606 | TGCAAGAGTCTGACCAACCA | 59.163 | 50.000 | 3.76 | 0.00 | 0.00 | 3.67 |
2589 | 2690 | 1.421268 | TGCAAGAGTCTGACCAACCAT | 59.579 | 47.619 | 3.76 | 0.00 | 0.00 | 3.55 |
2590 | 2691 | 2.637382 | TGCAAGAGTCTGACCAACCATA | 59.363 | 45.455 | 3.76 | 0.00 | 0.00 | 2.74 |
2591 | 2692 | 3.265791 | GCAAGAGTCTGACCAACCATAG | 58.734 | 50.000 | 3.76 | 0.00 | 0.00 | 2.23 |
2592 | 2693 | 3.307059 | GCAAGAGTCTGACCAACCATAGT | 60.307 | 47.826 | 3.76 | 0.00 | 0.00 | 2.12 |
2593 | 2694 | 4.248859 | CAAGAGTCTGACCAACCATAGTG | 58.751 | 47.826 | 3.76 | 0.00 | 0.00 | 2.74 |
2594 | 2695 | 3.511477 | AGAGTCTGACCAACCATAGTGT | 58.489 | 45.455 | 3.76 | 0.00 | 0.00 | 3.55 |
2595 | 2696 | 3.259374 | AGAGTCTGACCAACCATAGTGTG | 59.741 | 47.826 | 3.76 | 0.00 | 0.00 | 3.82 |
2596 | 2697 | 2.972713 | AGTCTGACCAACCATAGTGTGT | 59.027 | 45.455 | 3.76 | 0.00 | 0.00 | 3.72 |
2597 | 2698 | 4.157246 | AGTCTGACCAACCATAGTGTGTA | 58.843 | 43.478 | 3.76 | 0.00 | 0.00 | 2.90 |
2598 | 2699 | 4.591498 | AGTCTGACCAACCATAGTGTGTAA | 59.409 | 41.667 | 3.76 | 0.00 | 0.00 | 2.41 |
2599 | 2700 | 5.071250 | AGTCTGACCAACCATAGTGTGTAAA | 59.929 | 40.000 | 3.76 | 0.00 | 0.00 | 2.01 |
2600 | 2701 | 5.761234 | GTCTGACCAACCATAGTGTGTAAAA | 59.239 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2601 | 2702 | 6.430000 | GTCTGACCAACCATAGTGTGTAAAAT | 59.570 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2602 | 2703 | 6.653320 | TCTGACCAACCATAGTGTGTAAAATC | 59.347 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
2603 | 2704 | 5.708230 | TGACCAACCATAGTGTGTAAAATCC | 59.292 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2604 | 2705 | 5.014202 | ACCAACCATAGTGTGTAAAATCCC | 58.986 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
2605 | 2706 | 5.222254 | ACCAACCATAGTGTGTAAAATCCCT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2606 | 2707 | 5.357032 | CCAACCATAGTGTGTAAAATCCCTC | 59.643 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2607 | 2708 | 6.180472 | CAACCATAGTGTGTAAAATCCCTCT | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2608 | 2709 | 5.745227 | ACCATAGTGTGTAAAATCCCTCTG | 58.255 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
2609 | 2710 | 5.250774 | ACCATAGTGTGTAAAATCCCTCTGT | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2610 | 2711 | 5.817816 | CCATAGTGTGTAAAATCCCTCTGTC | 59.182 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2611 | 2712 | 6.352222 | CCATAGTGTGTAAAATCCCTCTGTCT | 60.352 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
2612 | 2713 | 5.153950 | AGTGTGTAAAATCCCTCTGTCTC | 57.846 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2613 | 2714 | 4.020128 | AGTGTGTAAAATCCCTCTGTCTCC | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
2614 | 2715 | 4.020128 | GTGTGTAAAATCCCTCTGTCTCCT | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
2615 | 2716 | 4.597507 | TGTGTAAAATCCCTCTGTCTCCTT | 59.402 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2616 | 2717 | 4.938226 | GTGTAAAATCCCTCTGTCTCCTTG | 59.062 | 45.833 | 0.00 | 0.00 | 0.00 | 3.61 |
2617 | 2718 | 4.597507 | TGTAAAATCCCTCTGTCTCCTTGT | 59.402 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2618 | 2719 | 3.990959 | AAATCCCTCTGTCTCCTTGTC | 57.009 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2619 | 2720 | 1.872773 | ATCCCTCTGTCTCCTTGTCC | 58.127 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2620 | 2721 | 0.252284 | TCCCTCTGTCTCCTTGTCCC | 60.252 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2621 | 2722 | 0.545309 | CCCTCTGTCTCCTTGTCCCA | 60.545 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2622 | 2723 | 1.577736 | CCTCTGTCTCCTTGTCCCAT | 58.422 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2623 | 2724 | 1.912043 | CCTCTGTCTCCTTGTCCCATT | 59.088 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
2624 | 2725 | 2.355513 | CCTCTGTCTCCTTGTCCCATTG | 60.356 | 54.545 | 0.00 | 0.00 | 0.00 | 2.82 |
2625 | 2726 | 2.568956 | CTCTGTCTCCTTGTCCCATTGA | 59.431 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2626 | 2727 | 3.184628 | TCTGTCTCCTTGTCCCATTGAT | 58.815 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2627 | 2728 | 3.588842 | TCTGTCTCCTTGTCCCATTGATT | 59.411 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2628 | 2729 | 4.782691 | TCTGTCTCCTTGTCCCATTGATTA | 59.217 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
2629 | 2730 | 5.429762 | TCTGTCTCCTTGTCCCATTGATTAT | 59.570 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2630 | 2731 | 6.069440 | TCTGTCTCCTTGTCCCATTGATTATT | 60.069 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
2631 | 2732 | 6.122277 | TGTCTCCTTGTCCCATTGATTATTC | 58.878 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2632 | 2733 | 5.237344 | GTCTCCTTGTCCCATTGATTATTCG | 59.763 | 44.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2633 | 2734 | 5.104527 | TCTCCTTGTCCCATTGATTATTCGT | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2634 | 2735 | 5.505780 | TCCTTGTCCCATTGATTATTCGTT | 58.494 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
2635 | 2736 | 5.949354 | TCCTTGTCCCATTGATTATTCGTTT | 59.051 | 36.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2636 | 2737 | 6.035843 | CCTTGTCCCATTGATTATTCGTTTG | 58.964 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2637 | 2738 | 4.992688 | TGTCCCATTGATTATTCGTTTGC | 58.007 | 39.130 | 0.00 | 0.00 | 0.00 | 3.68 |
2638 | 2739 | 4.704540 | TGTCCCATTGATTATTCGTTTGCT | 59.295 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
2639 | 2740 | 5.163663 | TGTCCCATTGATTATTCGTTTGCTC | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2640 | 2741 | 4.338118 | TCCCATTGATTATTCGTTTGCTCC | 59.662 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2641 | 2742 | 4.339247 | CCCATTGATTATTCGTTTGCTCCT | 59.661 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
2642 | 2743 | 5.506317 | CCCATTGATTATTCGTTTGCTCCTC | 60.506 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2643 | 2744 | 5.506317 | CCATTGATTATTCGTTTGCTCCTCC | 60.506 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2644 | 2745 | 4.487714 | TGATTATTCGTTTGCTCCTCCT | 57.512 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
2645 | 2746 | 4.191544 | TGATTATTCGTTTGCTCCTCCTG | 58.808 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
2646 | 2747 | 3.695830 | TTATTCGTTTGCTCCTCCTGT | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
2647 | 2748 | 2.568623 | ATTCGTTTGCTCCTCCTGTT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2648 | 2749 | 3.695830 | ATTCGTTTGCTCCTCCTGTTA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
2649 | 2750 | 3.478857 | TTCGTTTGCTCCTCCTGTTAA | 57.521 | 42.857 | 0.00 | 0.00 | 0.00 | 2.01 |
2650 | 2751 | 3.695830 | TCGTTTGCTCCTCCTGTTAAT | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
2651 | 2752 | 4.015872 | TCGTTTGCTCCTCCTGTTAATT | 57.984 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
2652 | 2753 | 4.394729 | TCGTTTGCTCCTCCTGTTAATTT | 58.605 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
2653 | 2754 | 4.454504 | TCGTTTGCTCCTCCTGTTAATTTC | 59.545 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
2654 | 2755 | 4.379499 | CGTTTGCTCCTCCTGTTAATTTCC | 60.379 | 45.833 | 0.00 | 0.00 | 0.00 | 3.13 |
2655 | 2756 | 4.657814 | TTGCTCCTCCTGTTAATTTCCT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
2656 | 2757 | 3.955471 | TGCTCCTCCTGTTAATTTCCTG | 58.045 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2657 | 2758 | 2.685388 | GCTCCTCCTGTTAATTTCCTGC | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2658 | 2759 | 2.939103 | CTCCTCCTGTTAATTTCCTGCG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2659 | 2760 | 2.017049 | CCTCCTGTTAATTTCCTGCGG | 58.983 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
2660 | 2761 | 1.401905 | CTCCTGTTAATTTCCTGCGGC | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
2661 | 2762 | 0.455815 | CCTGTTAATTTCCTGCGGCC | 59.544 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2662 | 2763 | 0.098728 | CTGTTAATTTCCTGCGGCCG | 59.901 | 55.000 | 24.05 | 24.05 | 0.00 | 6.13 |
2663 | 2764 | 1.226575 | GTTAATTTCCTGCGGCCGC | 60.227 | 57.895 | 42.35 | 42.35 | 42.35 | 6.53 |
2664 | 2765 | 1.377987 | TTAATTTCCTGCGGCCGCT | 60.378 | 52.632 | 45.79 | 28.94 | 42.51 | 5.52 |
2665 | 2766 | 1.373590 | TTAATTTCCTGCGGCCGCTC | 61.374 | 55.000 | 45.79 | 23.37 | 42.51 | 5.03 |
2674 | 2775 | 2.103538 | CGGCCGCTCGCTAAACTA | 59.896 | 61.111 | 14.67 | 0.00 | 37.74 | 2.24 |
2675 | 2776 | 1.517694 | CGGCCGCTCGCTAAACTAA | 60.518 | 57.895 | 14.67 | 0.00 | 37.74 | 2.24 |
2676 | 2777 | 1.079875 | CGGCCGCTCGCTAAACTAAA | 61.080 | 55.000 | 14.67 | 0.00 | 37.74 | 1.85 |
2677 | 2778 | 1.081094 | GGCCGCTCGCTAAACTAAAA | 58.919 | 50.000 | 0.00 | 0.00 | 37.74 | 1.52 |
2678 | 2779 | 1.062148 | GGCCGCTCGCTAAACTAAAAG | 59.938 | 52.381 | 0.00 | 0.00 | 37.74 | 2.27 |
2679 | 2780 | 1.997606 | GCCGCTCGCTAAACTAAAAGA | 59.002 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2680 | 2781 | 2.414138 | GCCGCTCGCTAAACTAAAAGAA | 59.586 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2681 | 2782 | 3.063588 | GCCGCTCGCTAAACTAAAAGAAT | 59.936 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
2682 | 2783 | 4.578601 | CCGCTCGCTAAACTAAAAGAATG | 58.421 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
2683 | 2784 | 4.022475 | CGCTCGCTAAACTAAAAGAATGC | 58.978 | 43.478 | 0.00 | 0.00 | 0.00 | 3.56 |
2684 | 2785 | 4.435518 | CGCTCGCTAAACTAAAAGAATGCA | 60.436 | 41.667 | 0.00 | 0.00 | 0.00 | 3.96 |
2685 | 2786 | 5.573146 | GCTCGCTAAACTAAAAGAATGCAT | 58.427 | 37.500 | 0.00 | 0.00 | 0.00 | 3.96 |
2686 | 2787 | 6.030228 | GCTCGCTAAACTAAAAGAATGCATT | 58.970 | 36.000 | 12.83 | 12.83 | 0.00 | 3.56 |
2687 | 2788 | 6.021153 | GCTCGCTAAACTAAAAGAATGCATTG | 60.021 | 38.462 | 18.59 | 3.47 | 0.00 | 2.82 |
2688 | 2789 | 6.321717 | TCGCTAAACTAAAAGAATGCATTGG | 58.678 | 36.000 | 18.59 | 0.00 | 0.00 | 3.16 |
2689 | 2790 | 5.004726 | CGCTAAACTAAAAGAATGCATTGGC | 59.995 | 40.000 | 18.59 | 2.99 | 41.68 | 4.52 |
2690 | 2791 | 6.101997 | GCTAAACTAAAAGAATGCATTGGCT | 58.898 | 36.000 | 18.59 | 5.67 | 41.91 | 4.75 |
2691 | 2792 | 6.035327 | GCTAAACTAAAAGAATGCATTGGCTG | 59.965 | 38.462 | 18.59 | 4.59 | 41.91 | 4.85 |
2701 | 2802 | 2.676744 | CATTGGCTGCATGCACATG | 58.323 | 52.632 | 18.46 | 12.50 | 45.15 | 3.21 |
2702 | 2803 | 0.174617 | CATTGGCTGCATGCACATGA | 59.825 | 50.000 | 18.46 | 3.80 | 45.15 | 3.07 |
2703 | 2804 | 0.459899 | ATTGGCTGCATGCACATGAG | 59.540 | 50.000 | 18.46 | 8.01 | 45.15 | 2.90 |
2704 | 2805 | 0.896479 | TTGGCTGCATGCACATGAGT | 60.896 | 50.000 | 18.46 | 0.00 | 45.15 | 3.41 |
2705 | 2806 | 0.035247 | TGGCTGCATGCACATGAGTA | 60.035 | 50.000 | 18.46 | 0.00 | 45.15 | 2.59 |
2706 | 2807 | 1.315690 | GGCTGCATGCACATGAGTAT | 58.684 | 50.000 | 18.46 | 0.00 | 45.15 | 2.12 |
2707 | 2808 | 1.266175 | GGCTGCATGCACATGAGTATC | 59.734 | 52.381 | 18.46 | 0.00 | 45.15 | 2.24 |
2708 | 2809 | 2.219458 | GCTGCATGCACATGAGTATCT | 58.781 | 47.619 | 18.46 | 0.00 | 41.20 | 1.98 |
2709 | 2810 | 2.031944 | GCTGCATGCACATGAGTATCTG | 60.032 | 50.000 | 18.46 | 3.34 | 41.20 | 2.90 |
2710 | 2811 | 1.944709 | TGCATGCACATGAGTATCTGC | 59.055 | 47.619 | 18.46 | 0.00 | 41.20 | 4.26 |
2711 | 2812 | 2.219458 | GCATGCACATGAGTATCTGCT | 58.781 | 47.619 | 14.21 | 0.00 | 41.20 | 4.24 |
2712 | 2813 | 2.223611 | GCATGCACATGAGTATCTGCTC | 59.776 | 50.000 | 14.21 | 0.00 | 41.20 | 4.26 |
2714 | 2815 | 2.897436 | TGCACATGAGTATCTGCTCAC | 58.103 | 47.619 | 0.00 | 0.00 | 46.72 | 3.51 |
2715 | 2816 | 2.208431 | GCACATGAGTATCTGCTCACC | 58.792 | 52.381 | 0.00 | 0.00 | 46.72 | 4.02 |
2716 | 2817 | 2.158986 | GCACATGAGTATCTGCTCACCT | 60.159 | 50.000 | 0.00 | 0.00 | 46.72 | 4.00 |
2717 | 2818 | 3.068732 | GCACATGAGTATCTGCTCACCTA | 59.931 | 47.826 | 0.00 | 0.00 | 46.72 | 3.08 |
2718 | 2819 | 4.795635 | GCACATGAGTATCTGCTCACCTAG | 60.796 | 50.000 | 0.00 | 0.00 | 46.72 | 3.02 |
2719 | 2820 | 4.340666 | CACATGAGTATCTGCTCACCTAGT | 59.659 | 45.833 | 0.00 | 0.00 | 46.72 | 2.57 |
2720 | 2821 | 4.959210 | ACATGAGTATCTGCTCACCTAGTT | 59.041 | 41.667 | 0.00 | 0.00 | 46.72 | 2.24 |
2721 | 2822 | 4.991153 | TGAGTATCTGCTCACCTAGTTG | 57.009 | 45.455 | 0.00 | 0.00 | 40.23 | 3.16 |
2722 | 2823 | 3.131223 | TGAGTATCTGCTCACCTAGTTGC | 59.869 | 47.826 | 0.00 | 0.00 | 40.23 | 4.17 |
2723 | 2824 | 2.099921 | AGTATCTGCTCACCTAGTTGCG | 59.900 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2724 | 2825 | 0.898320 | ATCTGCTCACCTAGTTGCGT | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2725 | 2826 | 0.038251 | TCTGCTCACCTAGTTGCGTG | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2726 | 2827 | 1.630244 | CTGCTCACCTAGTTGCGTGC | 61.630 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2727 | 2828 | 2.391389 | GCTCACCTAGTTGCGTGCC | 61.391 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
2728 | 2829 | 1.293498 | CTCACCTAGTTGCGTGCCT | 59.707 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
2729 | 2830 | 0.320771 | CTCACCTAGTTGCGTGCCTT | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2730 | 2831 | 0.320421 | TCACCTAGTTGCGTGCCTTC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2731 | 2832 | 1.374252 | ACCTAGTTGCGTGCCTTCG | 60.374 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
2732 | 2833 | 1.374252 | CCTAGTTGCGTGCCTTCGT | 60.374 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
2733 | 2834 | 0.108992 | CCTAGTTGCGTGCCTTCGTA | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.43 |
2734 | 2835 | 1.269166 | CTAGTTGCGTGCCTTCGTAG | 58.731 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2735 | 2836 | 0.108992 | TAGTTGCGTGCCTTCGTAGG | 60.109 | 55.000 | 3.26 | 3.26 | 45.02 | 3.18 |
2747 | 2848 | 3.378339 | CCTTCGTAGGCAATAACTACCG | 58.622 | 50.000 | 0.00 | 0.00 | 38.00 | 4.02 |
2748 | 2849 | 2.497107 | TCGTAGGCAATAACTACCGC | 57.503 | 50.000 | 0.00 | 0.00 | 38.00 | 5.68 |
2749 | 2850 | 1.126079 | CGTAGGCAATAACTACCGCG | 58.874 | 55.000 | 0.00 | 0.00 | 38.00 | 6.46 |
2750 | 2851 | 1.268692 | CGTAGGCAATAACTACCGCGA | 60.269 | 52.381 | 8.23 | 0.00 | 38.00 | 5.87 |
2751 | 2852 | 2.391879 | GTAGGCAATAACTACCGCGAG | 58.608 | 52.381 | 8.23 | 0.00 | 35.83 | 5.03 |
2752 | 2853 | 1.108776 | AGGCAATAACTACCGCGAGA | 58.891 | 50.000 | 8.23 | 0.00 | 0.00 | 4.04 |
2753 | 2854 | 1.479323 | AGGCAATAACTACCGCGAGAA | 59.521 | 47.619 | 8.23 | 0.00 | 0.00 | 2.87 |
2754 | 2855 | 1.591619 | GGCAATAACTACCGCGAGAAC | 59.408 | 52.381 | 8.23 | 0.00 | 0.00 | 3.01 |
2755 | 2856 | 1.591619 | GCAATAACTACCGCGAGAACC | 59.408 | 52.381 | 8.23 | 0.00 | 0.00 | 3.62 |
2756 | 2857 | 2.883574 | CAATAACTACCGCGAGAACCA | 58.116 | 47.619 | 8.23 | 0.00 | 0.00 | 3.67 |
2757 | 2858 | 2.858344 | CAATAACTACCGCGAGAACCAG | 59.142 | 50.000 | 8.23 | 0.00 | 0.00 | 4.00 |
2758 | 2859 | 0.171903 | TAACTACCGCGAGAACCAGC | 59.828 | 55.000 | 8.23 | 0.00 | 0.00 | 4.85 |
2759 | 2860 | 2.202756 | CTACCGCGAGAACCAGCC | 60.203 | 66.667 | 8.23 | 0.00 | 0.00 | 4.85 |
2760 | 2861 | 2.992689 | TACCGCGAGAACCAGCCA | 60.993 | 61.111 | 8.23 | 0.00 | 0.00 | 4.75 |
2761 | 2862 | 2.501223 | CTACCGCGAGAACCAGCCAA | 62.501 | 60.000 | 8.23 | 0.00 | 0.00 | 4.52 |
2762 | 2863 | 1.895020 | TACCGCGAGAACCAGCCAAT | 61.895 | 55.000 | 8.23 | 0.00 | 0.00 | 3.16 |
2763 | 2864 | 1.153449 | CCGCGAGAACCAGCCAATA | 60.153 | 57.895 | 8.23 | 0.00 | 0.00 | 1.90 |
2764 | 2865 | 1.154205 | CCGCGAGAACCAGCCAATAG | 61.154 | 60.000 | 8.23 | 0.00 | 0.00 | 1.73 |
2765 | 2866 | 0.179111 | CGCGAGAACCAGCCAATAGA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2766 | 2867 | 1.739035 | CGCGAGAACCAGCCAATAGAA | 60.739 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
2767 | 2868 | 2.356135 | GCGAGAACCAGCCAATAGAAA | 58.644 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2768 | 2869 | 2.747446 | GCGAGAACCAGCCAATAGAAAA | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
2769 | 2870 | 3.181506 | GCGAGAACCAGCCAATAGAAAAG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
2770 | 2871 | 3.375299 | CGAGAACCAGCCAATAGAAAAGG | 59.625 | 47.826 | 0.00 | 0.00 | 0.00 | 3.11 |
2771 | 2872 | 4.336280 | GAGAACCAGCCAATAGAAAAGGT | 58.664 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
2772 | 2873 | 4.336280 | AGAACCAGCCAATAGAAAAGGTC | 58.664 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
2773 | 2874 | 2.711542 | ACCAGCCAATAGAAAAGGTCG | 58.288 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
2774 | 2875 | 2.304761 | ACCAGCCAATAGAAAAGGTCGA | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2775 | 2876 | 2.939103 | CCAGCCAATAGAAAAGGTCGAG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
2776 | 2877 | 2.352960 | CAGCCAATAGAAAAGGTCGAGC | 59.647 | 50.000 | 6.48 | 6.48 | 0.00 | 5.03 |
2777 | 2878 | 1.327764 | GCCAATAGAAAAGGTCGAGCG | 59.672 | 52.381 | 9.28 | 0.00 | 0.00 | 5.03 |
2778 | 2879 | 2.618053 | CCAATAGAAAAGGTCGAGCGT | 58.382 | 47.619 | 9.28 | 2.41 | 0.00 | 5.07 |
2779 | 2880 | 3.000727 | CCAATAGAAAAGGTCGAGCGTT | 58.999 | 45.455 | 10.03 | 10.03 | 0.00 | 4.84 |
2780 | 2881 | 3.435671 | CCAATAGAAAAGGTCGAGCGTTT | 59.564 | 43.478 | 24.80 | 24.80 | 36.83 | 3.60 |
2781 | 2882 | 4.083484 | CCAATAGAAAAGGTCGAGCGTTTT | 60.083 | 41.667 | 25.18 | 21.36 | 44.69 | 2.43 |
2782 | 2883 | 4.663636 | ATAGAAAAGGTCGAGCGTTTTG | 57.336 | 40.909 | 25.18 | 0.00 | 42.86 | 2.44 |
2783 | 2884 | 1.002792 | AGAAAAGGTCGAGCGTTTTGC | 60.003 | 47.619 | 25.18 | 15.59 | 42.86 | 3.68 |
2793 | 2894 | 4.054825 | CGTTTTGCATGCGGCCCT | 62.055 | 61.111 | 14.09 | 0.00 | 43.89 | 5.19 |
2794 | 2895 | 2.125952 | GTTTTGCATGCGGCCCTC | 60.126 | 61.111 | 14.09 | 0.00 | 43.89 | 4.30 |
2795 | 2896 | 2.283101 | TTTTGCATGCGGCCCTCT | 60.283 | 55.556 | 14.09 | 0.00 | 43.89 | 3.69 |
2796 | 2897 | 1.001517 | TTTTGCATGCGGCCCTCTA | 60.002 | 52.632 | 14.09 | 0.00 | 43.89 | 2.43 |
2797 | 2898 | 0.610509 | TTTTGCATGCGGCCCTCTAA | 60.611 | 50.000 | 14.09 | 0.00 | 43.89 | 2.10 |
2798 | 2899 | 0.395586 | TTTGCATGCGGCCCTCTAAT | 60.396 | 50.000 | 14.09 | 0.00 | 43.89 | 1.73 |
2799 | 2900 | 0.395586 | TTGCATGCGGCCCTCTAATT | 60.396 | 50.000 | 14.09 | 0.00 | 43.89 | 1.40 |
2800 | 2901 | 0.819259 | TGCATGCGGCCCTCTAATTC | 60.819 | 55.000 | 14.09 | 0.00 | 43.89 | 2.17 |
2801 | 2902 | 0.819259 | GCATGCGGCCCTCTAATTCA | 60.819 | 55.000 | 0.00 | 0.00 | 36.11 | 2.57 |
2802 | 2903 | 1.233019 | CATGCGGCCCTCTAATTCAG | 58.767 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2803 | 2904 | 0.109342 | ATGCGGCCCTCTAATTCAGG | 59.891 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2804 | 2905 | 0.980754 | TGCGGCCCTCTAATTCAGGA | 60.981 | 55.000 | 0.00 | 0.00 | 31.91 | 3.86 |
2805 | 2906 | 0.533085 | GCGGCCCTCTAATTCAGGAC | 60.533 | 60.000 | 0.00 | 0.00 | 31.91 | 3.85 |
2806 | 2907 | 0.249489 | CGGCCCTCTAATTCAGGACG | 60.249 | 60.000 | 0.00 | 1.47 | 31.91 | 4.79 |
2807 | 2908 | 0.533085 | GGCCCTCTAATTCAGGACGC | 60.533 | 60.000 | 5.12 | 1.72 | 31.91 | 5.19 |
2808 | 2909 | 0.533085 | GCCCTCTAATTCAGGACGCC | 60.533 | 60.000 | 5.12 | 0.00 | 31.91 | 5.68 |
2809 | 2910 | 1.123928 | CCCTCTAATTCAGGACGCCT | 58.876 | 55.000 | 5.12 | 0.00 | 31.91 | 5.52 |
2817 | 2918 | 4.598257 | CAGGACGCCTGTAACCTG | 57.402 | 61.111 | 15.27 | 0.00 | 45.82 | 4.00 |
2818 | 2919 | 1.741770 | CAGGACGCCTGTAACCTGC | 60.742 | 63.158 | 15.27 | 0.00 | 45.82 | 4.85 |
2819 | 2920 | 1.913762 | AGGACGCCTGTAACCTGCT | 60.914 | 57.895 | 0.00 | 0.00 | 29.57 | 4.24 |
2820 | 2921 | 1.448013 | GGACGCCTGTAACCTGCTC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
2821 | 2922 | 1.292223 | GACGCCTGTAACCTGCTCA | 59.708 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
2822 | 2923 | 1.004918 | ACGCCTGTAACCTGCTCAC | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
2823 | 2924 | 2.094659 | CGCCTGTAACCTGCTCACG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
2824 | 2925 | 1.741770 | GCCTGTAACCTGCTCACGG | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
2826 | 2927 | 1.541310 | CCTGTAACCTGCTCACGGGA | 61.541 | 60.000 | 0.00 | 0.00 | 46.41 | 5.14 |
2827 | 2928 | 0.389948 | CTGTAACCTGCTCACGGGAC | 60.390 | 60.000 | 0.00 | 0.00 | 46.41 | 4.46 |
2828 | 2929 | 0.830444 | TGTAACCTGCTCACGGGACT | 60.830 | 55.000 | 0.00 | 0.00 | 46.41 | 3.85 |
2829 | 2930 | 0.320697 | GTAACCTGCTCACGGGACTT | 59.679 | 55.000 | 0.00 | 0.00 | 46.41 | 3.01 |
2830 | 2931 | 1.547372 | GTAACCTGCTCACGGGACTTA | 59.453 | 52.381 | 0.00 | 0.00 | 46.41 | 2.24 |
2831 | 2932 | 1.053424 | AACCTGCTCACGGGACTTAA | 58.947 | 50.000 | 0.00 | 0.00 | 46.41 | 1.85 |
2832 | 2933 | 1.053424 | ACCTGCTCACGGGACTTAAA | 58.947 | 50.000 | 0.00 | 0.00 | 46.41 | 1.52 |
2833 | 2934 | 1.418637 | ACCTGCTCACGGGACTTAAAA | 59.581 | 47.619 | 0.00 | 0.00 | 46.41 | 1.52 |
2834 | 2935 | 2.039879 | ACCTGCTCACGGGACTTAAAAT | 59.960 | 45.455 | 0.00 | 0.00 | 46.41 | 1.82 |
2835 | 2936 | 2.678336 | CCTGCTCACGGGACTTAAAATC | 59.322 | 50.000 | 0.00 | 0.00 | 46.41 | 2.17 |
2836 | 2937 | 2.678336 | CTGCTCACGGGACTTAAAATCC | 59.322 | 50.000 | 0.00 | 0.00 | 35.28 | 3.01 |
2842 | 2943 | 1.660167 | GGGACTTAAAATCCCGGACG | 58.340 | 55.000 | 0.73 | 0.00 | 46.51 | 4.79 |
2843 | 2944 | 1.660167 | GGACTTAAAATCCCGGACGG | 58.340 | 55.000 | 0.73 | 3.25 | 0.00 | 4.79 |
2844 | 2945 | 4.062704 | GGGACTTAAAATCCCGGACGGA | 62.063 | 54.545 | 13.13 | 0.00 | 46.51 | 4.69 |
2845 | 2946 | 2.547826 | GACTTAAAATCCCGGACGGAG | 58.452 | 52.381 | 13.13 | 2.05 | 46.60 | 4.63 |
2886 | 2987 | 8.958175 | TTTGTACTGAAAATGGTTAAATAGCG | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
2891 | 2992 | 6.861055 | ACTGAAAATGGTTAAATAGCGTTGTG | 59.139 | 34.615 | 0.00 | 0.00 | 33.89 | 3.33 |
2960 | 3061 | 0.527817 | GGTACGGCGGATGACTCAAG | 60.528 | 60.000 | 13.24 | 0.00 | 0.00 | 3.02 |
3019 | 3121 | 2.107378 | TGGGCTTCATTGTGTTCACCTA | 59.893 | 45.455 | 0.37 | 0.00 | 0.00 | 3.08 |
3022 | 3124 | 3.146066 | GCTTCATTGTGTTCACCTACCA | 58.854 | 45.455 | 0.37 | 0.00 | 0.00 | 3.25 |
3097 | 3199 | 0.611200 | TAATGGTGGGACGGTCTGTG | 59.389 | 55.000 | 8.23 | 0.00 | 0.00 | 3.66 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
66 | 67 | 7.659290 | AGTTTGACAAACGAAATTTTAGTCG | 57.341 | 32.000 | 22.06 | 0.00 | 45.88 | 4.18 |
84 | 85 | 5.845103 | TGTGTGTCTCGGTAATTAGTTTGA | 58.155 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
94 | 95 | 8.959548 | TCTAGTTTATAATTGTGTGTCTCGGTA | 58.040 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
98 | 99 | 9.099454 | CCCTTCTAGTTTATAATTGTGTGTCTC | 57.901 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
124 | 125 | 1.133407 | CTGAGGGACAGCGACTAACTC | 59.867 | 57.143 | 0.00 | 0.00 | 39.86 | 3.01 |
133 | 134 | 2.509549 | TGGCTCTAACTGAGGGACAGC | 61.510 | 57.143 | 0.00 | 0.00 | 39.58 | 4.40 |
134 | 135 | 1.561643 | TGGCTCTAACTGAGGGACAG | 58.438 | 55.000 | 0.00 | 0.00 | 39.58 | 3.51 |
141 | 142 | 2.310779 | ACTGGACTGGCTCTAACTGA | 57.689 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
142 | 143 | 3.677424 | GCTTACTGGACTGGCTCTAACTG | 60.677 | 52.174 | 0.00 | 0.00 | 0.00 | 3.16 |
180 | 181 | 8.246180 | TCAGAACTCAATTAATTGATTGAAGCC | 58.754 | 33.333 | 26.83 | 14.57 | 44.92 | 4.35 |
196 | 197 | 5.297547 | ACGTAGCTTTCATTCAGAACTCAA | 58.702 | 37.500 | 0.00 | 0.00 | 35.56 | 3.02 |
212 | 213 | 1.134560 | GTTGGAGGATCGAACGTAGCT | 59.865 | 52.381 | 0.00 | 0.00 | 43.65 | 3.32 |
255 | 256 | 4.751098 | TGGCAAAGAAGAAAAATGATGCAC | 59.249 | 37.500 | 0.00 | 0.00 | 34.37 | 4.57 |
256 | 257 | 4.958509 | TGGCAAAGAAGAAAAATGATGCA | 58.041 | 34.783 | 0.00 | 0.00 | 34.37 | 3.96 |
440 | 444 | 0.612732 | TTCTTCCTCTACCCGGCGAA | 60.613 | 55.000 | 9.30 | 0.00 | 0.00 | 4.70 |
469 | 473 | 0.958876 | TGGATGTTGCTGCTGCTCAG | 60.959 | 55.000 | 17.00 | 2.74 | 45.62 | 3.35 |
470 | 474 | 0.323087 | ATGGATGTTGCTGCTGCTCA | 60.323 | 50.000 | 17.00 | 15.08 | 40.48 | 4.26 |
487 | 491 | 1.602851 | GTGCTGCAGCTTCCTATGATG | 59.397 | 52.381 | 36.61 | 0.00 | 42.66 | 3.07 |
540 | 544 | 2.507102 | CACCGCTACTGCTCGTGG | 60.507 | 66.667 | 0.00 | 0.00 | 35.11 | 4.94 |
608 | 639 | 5.539048 | TGGGAGAGCTATATTAAGAAACGC | 58.461 | 41.667 | 0.00 | 0.00 | 0.00 | 4.84 |
623 | 654 | 0.104671 | GTGAGAGAGCATGGGAGAGC | 59.895 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
694 | 745 | 8.704849 | TGAAATGATTTCTTCCAAACTAGGAA | 57.295 | 30.769 | 17.76 | 0.00 | 44.72 | 3.36 |
702 | 753 | 5.279607 | CCAGGCTTGAAATGATTTCTTCCAA | 60.280 | 40.000 | 17.76 | 4.83 | 40.32 | 3.53 |
782 | 833 | 6.093495 | CGTAGGCAATGAGGACAAATTAGAAA | 59.907 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
783 | 834 | 5.584649 | CGTAGGCAATGAGGACAAATTAGAA | 59.415 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
798 | 849 | 0.249489 | GATGACGGAGCGTAGGCAAT | 60.249 | 55.000 | 10.48 | 0.00 | 41.37 | 3.56 |
816 | 867 | 4.737578 | ACACACAGTCTACCTCCTTAAGA | 58.262 | 43.478 | 3.36 | 0.00 | 0.00 | 2.10 |
821 | 872 | 3.577919 | AGAAACACACAGTCTACCTCCT | 58.422 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
828 | 879 | 8.958119 | TGATTAGTAAAAGAAACACACAGTCT | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
846 | 897 | 5.133221 | ACTCTGGTTGCAGTTTTGATTAGT | 58.867 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
868 | 919 | 7.723324 | TGTCAAATCATAGGCCTACTACTAAC | 58.277 | 38.462 | 16.61 | 9.06 | 33.70 | 2.34 |
869 | 920 | 7.907841 | TGTCAAATCATAGGCCTACTACTAA | 57.092 | 36.000 | 16.61 | 0.00 | 33.70 | 2.24 |
932 | 983 | 3.004315 | TGTTTGTCGCCCTTCTTCATTTC | 59.996 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
953 | 1004 | 1.717645 | GAAACAAGAGCAAGCGCATTG | 59.282 | 47.619 | 11.47 | 12.57 | 42.27 | 2.82 |
1069 | 1125 | 4.994471 | TGACAGTGGCAGCGGCTG | 62.994 | 66.667 | 25.21 | 25.21 | 40.87 | 4.85 |
1110 | 1166 | 5.299148 | CCAATATTCAGCTCAGGAGAGAAG | 58.701 | 45.833 | 0.00 | 0.00 | 44.98 | 2.85 |
1124 | 1180 | 1.208706 | TCCACCGGAGCCAATATTCA | 58.791 | 50.000 | 9.46 | 0.00 | 0.00 | 2.57 |
1128 | 1184 | 1.003118 | GCATATCCACCGGAGCCAATA | 59.997 | 52.381 | 9.46 | 0.00 | 34.05 | 1.90 |
1145 | 1201 | 4.407945 | ACTGTACCTTATAAACCTCCGCAT | 59.592 | 41.667 | 0.00 | 0.00 | 0.00 | 4.73 |
1205 | 1267 | 7.713073 | AGTTTGATTAAATCCTTTCCGCAAAAA | 59.287 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
1206 | 1268 | 7.213678 | AGTTTGATTAAATCCTTTCCGCAAAA | 58.786 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
1207 | 1269 | 6.754193 | AGTTTGATTAAATCCTTTCCGCAAA | 58.246 | 32.000 | 0.00 | 0.00 | 0.00 | 3.68 |
1208 | 1270 | 6.339587 | AGTTTGATTAAATCCTTTCCGCAA | 57.660 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
1209 | 1271 | 5.975693 | AGTTTGATTAAATCCTTTCCGCA | 57.024 | 34.783 | 0.00 | 0.00 | 0.00 | 5.69 |
1210 | 1272 | 8.926715 | ATAAAGTTTGATTAAATCCTTTCCGC | 57.073 | 30.769 | 0.00 | 0.00 | 29.91 | 5.54 |
1270 | 1337 | 6.485830 | TTCTCAAGAATTCCCTACATCGAT | 57.514 | 37.500 | 0.65 | 0.00 | 0.00 | 3.59 |
1354 | 1421 | 5.413523 | CACCATCATGAGACATTCAACTTCA | 59.586 | 40.000 | 0.09 | 0.00 | 39.77 | 3.02 |
1420 | 1487 | 4.571919 | ACTTTAACATACTGCCTTGCGTA | 58.428 | 39.130 | 0.00 | 0.00 | 0.00 | 4.42 |
1521 | 1588 | 6.015350 | CCATATGATCCTACCCGTGATATACC | 60.015 | 46.154 | 3.65 | 0.00 | 0.00 | 2.73 |
1589 | 1664 | 5.702670 | GTGATATGTGGGATACTGAACCATG | 59.297 | 44.000 | 0.00 | 0.00 | 36.54 | 3.66 |
1999 | 2096 | 0.464373 | CCCCTGCACAATAGATGCGT | 60.464 | 55.000 | 0.00 | 0.00 | 46.49 | 5.24 |
2003 | 2100 | 4.796110 | ACATAACCCCTGCACAATAGAT | 57.204 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
2010 | 2107 | 2.652313 | TGCAACATAACCCCTGCAC | 58.348 | 52.632 | 0.00 | 0.00 | 39.77 | 4.57 |
2040 | 2137 | 2.399396 | GGTGTGTGATTTCACCGTTG | 57.601 | 50.000 | 8.16 | 0.00 | 45.88 | 4.10 |
2073 | 2170 | 5.466819 | TCCGCGATTATTATACCAAGACTG | 58.533 | 41.667 | 8.23 | 0.00 | 0.00 | 3.51 |
2092 | 2189 | 0.680280 | TCTCCTGTCAGTACCTCCGC | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2137 | 2234 | 4.648651 | ACCTAAATCGTGCTTACCTTGTT | 58.351 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
2216 | 2315 | 6.236409 | AGGGAGTGATATTATGTTGCATCTG | 58.764 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2333 | 2433 | 6.322712 | AGGTGACTTCCATCTACTAGATGTTC | 59.677 | 42.308 | 20.21 | 12.93 | 44.26 | 3.18 |
2376 | 2476 | 0.975135 | TTCGGTGACCATTTCGGGTA | 59.025 | 50.000 | 1.11 | 0.00 | 42.53 | 3.69 |
2490 | 2591 | 2.303022 | CCCGGACCGAGGTAGTACTATA | 59.697 | 54.545 | 17.49 | 0.00 | 0.00 | 1.31 |
2492 | 2593 | 0.469917 | CCCGGACCGAGGTAGTACTA | 59.530 | 60.000 | 17.49 | 0.00 | 0.00 | 1.82 |
2493 | 2594 | 1.225704 | CCCGGACCGAGGTAGTACT | 59.774 | 63.158 | 17.49 | 0.00 | 0.00 | 2.73 |
2494 | 2595 | 0.681243 | AACCCGGACCGAGGTAGTAC | 60.681 | 60.000 | 22.40 | 0.00 | 34.45 | 2.73 |
2495 | 2596 | 0.039618 | AAACCCGGACCGAGGTAGTA | 59.960 | 55.000 | 22.40 | 0.00 | 34.45 | 1.82 |
2496 | 2597 | 0.039618 | TAAACCCGGACCGAGGTAGT | 59.960 | 55.000 | 22.40 | 16.82 | 34.45 | 2.73 |
2497 | 2598 | 1.185315 | TTAAACCCGGACCGAGGTAG | 58.815 | 55.000 | 22.40 | 4.05 | 34.45 | 3.18 |
2498 | 2599 | 1.550072 | CTTTAAACCCGGACCGAGGTA | 59.450 | 52.381 | 22.40 | 9.41 | 34.45 | 3.08 |
2499 | 2600 | 0.322648 | CTTTAAACCCGGACCGAGGT | 59.677 | 55.000 | 17.49 | 17.88 | 38.27 | 3.85 |
2500 | 2601 | 0.392060 | CCTTTAAACCCGGACCGAGG | 60.392 | 60.000 | 17.49 | 17.18 | 0.00 | 4.63 |
2501 | 2602 | 1.022982 | GCCTTTAAACCCGGACCGAG | 61.023 | 60.000 | 17.49 | 4.05 | 0.00 | 4.63 |
2502 | 2603 | 1.003476 | GCCTTTAAACCCGGACCGA | 60.003 | 57.895 | 17.49 | 0.00 | 0.00 | 4.69 |
2503 | 2604 | 2.042259 | GGCCTTTAAACCCGGACCG | 61.042 | 63.158 | 6.99 | 6.99 | 0.00 | 4.79 |
2504 | 2605 | 1.679977 | GGGCCTTTAAACCCGGACC | 60.680 | 63.158 | 0.73 | 1.24 | 39.20 | 4.46 |
2505 | 2606 | 4.007457 | GGGCCTTTAAACCCGGAC | 57.993 | 61.111 | 0.73 | 0.00 | 36.07 | 4.79 |
2521 | 2622 | 3.361977 | CGCGTTTTGGTCTGGGGG | 61.362 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
2522 | 2623 | 2.593436 | ACGCGTTTTGGTCTGGGG | 60.593 | 61.111 | 5.58 | 0.00 | 0.00 | 4.96 |
2523 | 2624 | 0.881159 | TACACGCGTTTTGGTCTGGG | 60.881 | 55.000 | 10.22 | 0.00 | 0.00 | 4.45 |
2524 | 2625 | 0.233848 | GTACACGCGTTTTGGTCTGG | 59.766 | 55.000 | 10.22 | 0.00 | 0.00 | 3.86 |
2525 | 2626 | 0.233848 | GGTACACGCGTTTTGGTCTG | 59.766 | 55.000 | 10.22 | 0.00 | 0.00 | 3.51 |
2526 | 2627 | 0.179078 | TGGTACACGCGTTTTGGTCT | 60.179 | 50.000 | 10.22 | 0.00 | 0.00 | 3.85 |
2527 | 2628 | 0.656785 | TTGGTACACGCGTTTTGGTC | 59.343 | 50.000 | 10.22 | 0.00 | 39.29 | 4.02 |
2528 | 2629 | 0.658897 | CTTGGTACACGCGTTTTGGT | 59.341 | 50.000 | 10.22 | 7.18 | 39.29 | 3.67 |
2529 | 2630 | 0.938713 | TCTTGGTACACGCGTTTTGG | 59.061 | 50.000 | 10.22 | 0.00 | 39.29 | 3.28 |
2530 | 2631 | 1.655325 | CGTCTTGGTACACGCGTTTTG | 60.655 | 52.381 | 10.22 | 0.00 | 39.29 | 2.44 |
2531 | 2632 | 0.578211 | CGTCTTGGTACACGCGTTTT | 59.422 | 50.000 | 10.22 | 1.15 | 39.29 | 2.43 |
2532 | 2633 | 2.218934 | CGTCTTGGTACACGCGTTT | 58.781 | 52.632 | 10.22 | 5.90 | 39.29 | 3.60 |
2533 | 2634 | 3.926497 | CGTCTTGGTACACGCGTT | 58.074 | 55.556 | 10.22 | 3.81 | 39.29 | 4.84 |
2537 | 2638 | 0.732880 | CTGAGGCGTCTTGGTACACG | 60.733 | 60.000 | 8.06 | 0.00 | 39.29 | 4.49 |
2538 | 2639 | 0.317479 | ACTGAGGCGTCTTGGTACAC | 59.683 | 55.000 | 8.06 | 0.00 | 39.29 | 2.90 |
2539 | 2640 | 0.317160 | CACTGAGGCGTCTTGGTACA | 59.683 | 55.000 | 8.06 | 0.00 | 0.00 | 2.90 |
2540 | 2641 | 1.014564 | GCACTGAGGCGTCTTGGTAC | 61.015 | 60.000 | 8.06 | 0.00 | 0.00 | 3.34 |
2541 | 2642 | 1.292223 | GCACTGAGGCGTCTTGGTA | 59.708 | 57.895 | 8.06 | 0.00 | 0.00 | 3.25 |
2542 | 2643 | 2.031163 | GCACTGAGGCGTCTTGGT | 59.969 | 61.111 | 8.06 | 1.66 | 0.00 | 3.67 |
2543 | 2644 | 0.108186 | TATGCACTGAGGCGTCTTGG | 60.108 | 55.000 | 8.06 | 1.06 | 36.28 | 3.61 |
2544 | 2645 | 1.284657 | CTATGCACTGAGGCGTCTTG | 58.715 | 55.000 | 8.06 | 6.14 | 36.28 | 3.02 |
2545 | 2646 | 0.898320 | ACTATGCACTGAGGCGTCTT | 59.102 | 50.000 | 8.06 | 0.00 | 36.28 | 3.01 |
2546 | 2647 | 1.763968 | TACTATGCACTGAGGCGTCT | 58.236 | 50.000 | 8.06 | 0.00 | 36.28 | 4.18 |
2547 | 2648 | 2.579207 | TTACTATGCACTGAGGCGTC | 57.421 | 50.000 | 0.00 | 0.00 | 36.28 | 5.19 |
2548 | 2649 | 2.695666 | AGATTACTATGCACTGAGGCGT | 59.304 | 45.455 | 0.00 | 0.00 | 36.28 | 5.68 |
2549 | 2650 | 3.055591 | CAGATTACTATGCACTGAGGCG | 58.944 | 50.000 | 0.00 | 0.00 | 36.28 | 5.52 |
2550 | 2651 | 2.805099 | GCAGATTACTATGCACTGAGGC | 59.195 | 50.000 | 2.66 | 0.00 | 42.11 | 4.70 |
2551 | 2652 | 4.063998 | TGCAGATTACTATGCACTGAGG | 57.936 | 45.455 | 0.00 | 0.00 | 46.97 | 3.86 |
2558 | 2659 | 5.461737 | GTCAGACTCTTGCAGATTACTATGC | 59.538 | 44.000 | 0.00 | 0.00 | 42.86 | 3.14 |
2559 | 2660 | 5.982516 | GGTCAGACTCTTGCAGATTACTATG | 59.017 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2560 | 2661 | 5.658634 | TGGTCAGACTCTTGCAGATTACTAT | 59.341 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2561 | 2662 | 5.016831 | TGGTCAGACTCTTGCAGATTACTA | 58.983 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
2562 | 2663 | 3.834813 | TGGTCAGACTCTTGCAGATTACT | 59.165 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
2563 | 2664 | 4.193826 | TGGTCAGACTCTTGCAGATTAC | 57.806 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
2564 | 2665 | 4.563580 | GGTTGGTCAGACTCTTGCAGATTA | 60.564 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
2565 | 2666 | 3.406764 | GTTGGTCAGACTCTTGCAGATT | 58.593 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
2566 | 2667 | 2.289945 | GGTTGGTCAGACTCTTGCAGAT | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2567 | 2668 | 1.070758 | GGTTGGTCAGACTCTTGCAGA | 59.929 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2568 | 2669 | 1.202687 | TGGTTGGTCAGACTCTTGCAG | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
2569 | 2670 | 0.836606 | TGGTTGGTCAGACTCTTGCA | 59.163 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
2570 | 2671 | 2.191128 | ATGGTTGGTCAGACTCTTGC | 57.809 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2571 | 2672 | 4.248859 | CACTATGGTTGGTCAGACTCTTG | 58.751 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
2572 | 2673 | 3.904339 | ACACTATGGTTGGTCAGACTCTT | 59.096 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2573 | 2674 | 3.259374 | CACACTATGGTTGGTCAGACTCT | 59.741 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
2574 | 2675 | 3.006967 | ACACACTATGGTTGGTCAGACTC | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
2575 | 2676 | 2.972713 | ACACACTATGGTTGGTCAGACT | 59.027 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
2576 | 2677 | 3.402628 | ACACACTATGGTTGGTCAGAC | 57.597 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
2577 | 2678 | 5.554437 | TTTACACACTATGGTTGGTCAGA | 57.446 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
2578 | 2679 | 6.128007 | GGATTTTACACACTATGGTTGGTCAG | 60.128 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
2579 | 2680 | 5.708230 | GGATTTTACACACTATGGTTGGTCA | 59.292 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2580 | 2681 | 5.124936 | GGGATTTTACACACTATGGTTGGTC | 59.875 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2581 | 2682 | 5.014202 | GGGATTTTACACACTATGGTTGGT | 58.986 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2582 | 2683 | 5.261216 | AGGGATTTTACACACTATGGTTGG | 58.739 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
2583 | 2684 | 6.094048 | CAGAGGGATTTTACACACTATGGTTG | 59.906 | 42.308 | 0.00 | 0.00 | 0.00 | 3.77 |
2584 | 2685 | 6.180472 | CAGAGGGATTTTACACACTATGGTT | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2585 | 2686 | 5.250774 | ACAGAGGGATTTTACACACTATGGT | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2586 | 2687 | 5.745227 | ACAGAGGGATTTTACACACTATGG | 58.255 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2587 | 2688 | 6.644347 | AGACAGAGGGATTTTACACACTATG | 58.356 | 40.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2588 | 2689 | 6.127026 | GGAGACAGAGGGATTTTACACACTAT | 60.127 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
2589 | 2690 | 5.187186 | GGAGACAGAGGGATTTTACACACTA | 59.813 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2590 | 2691 | 4.020128 | GGAGACAGAGGGATTTTACACACT | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.55 |
2591 | 2692 | 4.020128 | AGGAGACAGAGGGATTTTACACAC | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.82 |
2592 | 2693 | 4.168101 | AGGAGACAGAGGGATTTTACACA | 58.832 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
2593 | 2694 | 4.828072 | AGGAGACAGAGGGATTTTACAC | 57.172 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2594 | 2695 | 4.597507 | ACAAGGAGACAGAGGGATTTTACA | 59.402 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
2595 | 2696 | 5.167303 | ACAAGGAGACAGAGGGATTTTAC | 57.833 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
2596 | 2697 | 4.225267 | GGACAAGGAGACAGAGGGATTTTA | 59.775 | 45.833 | 0.00 | 0.00 | 0.00 | 1.52 |
2597 | 2698 | 3.009584 | GGACAAGGAGACAGAGGGATTTT | 59.990 | 47.826 | 0.00 | 0.00 | 0.00 | 1.82 |
2598 | 2699 | 2.573915 | GGACAAGGAGACAGAGGGATTT | 59.426 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2599 | 2700 | 2.192263 | GGACAAGGAGACAGAGGGATT | 58.808 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
2600 | 2701 | 1.623834 | GGGACAAGGAGACAGAGGGAT | 60.624 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
2601 | 2702 | 0.252284 | GGGACAAGGAGACAGAGGGA | 60.252 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2602 | 2703 | 0.545309 | TGGGACAAGGAGACAGAGGG | 60.545 | 60.000 | 0.00 | 0.00 | 31.92 | 4.30 |
2603 | 2704 | 3.073228 | TGGGACAAGGAGACAGAGG | 57.927 | 57.895 | 0.00 | 0.00 | 31.92 | 3.69 |
2616 | 2717 | 5.248870 | AGCAAACGAATAATCAATGGGAC | 57.751 | 39.130 | 0.00 | 0.00 | 0.00 | 4.46 |
2617 | 2718 | 4.338118 | GGAGCAAACGAATAATCAATGGGA | 59.662 | 41.667 | 0.00 | 0.00 | 0.00 | 4.37 |
2618 | 2719 | 4.339247 | AGGAGCAAACGAATAATCAATGGG | 59.661 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2619 | 2720 | 5.505173 | AGGAGCAAACGAATAATCAATGG | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2620 | 2721 | 5.297776 | AGGAGGAGCAAACGAATAATCAATG | 59.702 | 40.000 | 0.00 | 0.00 | 0.00 | 2.82 |
2621 | 2722 | 5.297776 | CAGGAGGAGCAAACGAATAATCAAT | 59.702 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2622 | 2723 | 4.635765 | CAGGAGGAGCAAACGAATAATCAA | 59.364 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2623 | 2724 | 4.191544 | CAGGAGGAGCAAACGAATAATCA | 58.808 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2624 | 2725 | 4.192317 | ACAGGAGGAGCAAACGAATAATC | 58.808 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
2625 | 2726 | 4.222124 | ACAGGAGGAGCAAACGAATAAT | 57.778 | 40.909 | 0.00 | 0.00 | 0.00 | 1.28 |
2626 | 2727 | 3.695830 | ACAGGAGGAGCAAACGAATAA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
2627 | 2728 | 3.695830 | AACAGGAGGAGCAAACGAATA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
2628 | 2729 | 2.568623 | AACAGGAGGAGCAAACGAAT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2629 | 2730 | 3.478857 | TTAACAGGAGGAGCAAACGAA | 57.521 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2630 | 2731 | 3.695830 | ATTAACAGGAGGAGCAAACGA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2631 | 2732 | 4.379499 | GGAAATTAACAGGAGGAGCAAACG | 60.379 | 45.833 | 0.00 | 0.00 | 0.00 | 3.60 |
2632 | 2733 | 4.767409 | AGGAAATTAACAGGAGGAGCAAAC | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
2633 | 2734 | 4.766891 | CAGGAAATTAACAGGAGGAGCAAA | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 3.68 |
2634 | 2735 | 4.335416 | CAGGAAATTAACAGGAGGAGCAA | 58.665 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
2635 | 2736 | 3.873801 | GCAGGAAATTAACAGGAGGAGCA | 60.874 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
2636 | 2737 | 2.685388 | GCAGGAAATTAACAGGAGGAGC | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2637 | 2738 | 2.939103 | CGCAGGAAATTAACAGGAGGAG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2638 | 2739 | 2.985896 | CGCAGGAAATTAACAGGAGGA | 58.014 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
2657 | 2758 | 1.079875 | TTTAGTTTAGCGAGCGGCCG | 61.080 | 55.000 | 24.05 | 24.05 | 45.17 | 6.13 |
2658 | 2759 | 1.062148 | CTTTTAGTTTAGCGAGCGGCC | 59.938 | 52.381 | 0.00 | 0.00 | 45.17 | 6.13 |
2659 | 2760 | 1.997606 | TCTTTTAGTTTAGCGAGCGGC | 59.002 | 47.619 | 0.00 | 0.00 | 44.05 | 6.53 |
2660 | 2761 | 4.578601 | CATTCTTTTAGTTTAGCGAGCGG | 58.421 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
2661 | 2762 | 4.022475 | GCATTCTTTTAGTTTAGCGAGCG | 58.978 | 43.478 | 0.00 | 0.00 | 0.00 | 5.03 |
2662 | 2763 | 4.969816 | TGCATTCTTTTAGTTTAGCGAGC | 58.030 | 39.130 | 0.00 | 0.00 | 0.00 | 5.03 |
2663 | 2764 | 6.470235 | CCAATGCATTCTTTTAGTTTAGCGAG | 59.530 | 38.462 | 9.53 | 0.00 | 0.00 | 5.03 |
2664 | 2765 | 6.321717 | CCAATGCATTCTTTTAGTTTAGCGA | 58.678 | 36.000 | 9.53 | 0.00 | 0.00 | 4.93 |
2665 | 2766 | 5.004726 | GCCAATGCATTCTTTTAGTTTAGCG | 59.995 | 40.000 | 9.53 | 0.00 | 37.47 | 4.26 |
2666 | 2767 | 6.035327 | CAGCCAATGCATTCTTTTAGTTTAGC | 59.965 | 38.462 | 9.53 | 0.00 | 41.13 | 3.09 |
2667 | 2768 | 7.515957 | CAGCCAATGCATTCTTTTAGTTTAG | 57.484 | 36.000 | 9.53 | 0.00 | 41.13 | 1.85 |
2683 | 2784 | 0.174617 | TCATGTGCATGCAGCCAATG | 59.825 | 50.000 | 23.41 | 20.73 | 44.83 | 2.82 |
2684 | 2785 | 0.459899 | CTCATGTGCATGCAGCCAAT | 59.540 | 50.000 | 23.41 | 9.89 | 44.83 | 3.16 |
2685 | 2786 | 0.896479 | ACTCATGTGCATGCAGCCAA | 60.896 | 50.000 | 23.41 | 7.74 | 44.83 | 4.52 |
2686 | 2787 | 0.035247 | TACTCATGTGCATGCAGCCA | 60.035 | 50.000 | 23.41 | 17.37 | 44.83 | 4.75 |
2687 | 2788 | 1.266175 | GATACTCATGTGCATGCAGCC | 59.734 | 52.381 | 23.41 | 11.34 | 44.83 | 4.85 |
2688 | 2789 | 2.031944 | CAGATACTCATGTGCATGCAGC | 60.032 | 50.000 | 23.41 | 16.34 | 45.96 | 5.25 |
2689 | 2790 | 3.879932 | CAGATACTCATGTGCATGCAG | 57.120 | 47.619 | 23.41 | 11.76 | 38.65 | 4.41 |
2700 | 2801 | 3.131223 | GCAACTAGGTGAGCAGATACTCA | 59.869 | 47.826 | 13.29 | 0.00 | 44.32 | 3.41 |
2701 | 2802 | 3.712187 | GCAACTAGGTGAGCAGATACTC | 58.288 | 50.000 | 13.29 | 0.00 | 37.19 | 2.59 |
2702 | 2803 | 2.099921 | CGCAACTAGGTGAGCAGATACT | 59.900 | 50.000 | 13.29 | 0.00 | 0.00 | 2.12 |
2703 | 2804 | 2.159226 | ACGCAACTAGGTGAGCAGATAC | 60.159 | 50.000 | 13.29 | 0.00 | 0.00 | 2.24 |
2704 | 2805 | 2.100197 | ACGCAACTAGGTGAGCAGATA | 58.900 | 47.619 | 13.29 | 0.00 | 0.00 | 1.98 |
2705 | 2806 | 0.898320 | ACGCAACTAGGTGAGCAGAT | 59.102 | 50.000 | 13.29 | 0.00 | 0.00 | 2.90 |
2706 | 2807 | 0.038251 | CACGCAACTAGGTGAGCAGA | 60.038 | 55.000 | 13.29 | 0.00 | 36.25 | 4.26 |
2707 | 2808 | 1.630244 | GCACGCAACTAGGTGAGCAG | 61.630 | 60.000 | 13.29 | 6.07 | 36.25 | 4.24 |
2708 | 2809 | 1.667830 | GCACGCAACTAGGTGAGCA | 60.668 | 57.895 | 13.29 | 0.00 | 36.25 | 4.26 |
2709 | 2810 | 2.391389 | GGCACGCAACTAGGTGAGC | 61.391 | 63.158 | 13.29 | 11.70 | 36.25 | 4.26 |
2710 | 2811 | 0.320771 | AAGGCACGCAACTAGGTGAG | 60.321 | 55.000 | 13.29 | 11.67 | 36.25 | 3.51 |
2711 | 2812 | 0.320421 | GAAGGCACGCAACTAGGTGA | 60.320 | 55.000 | 13.29 | 0.00 | 36.25 | 4.02 |
2712 | 2813 | 1.626654 | CGAAGGCACGCAACTAGGTG | 61.627 | 60.000 | 2.45 | 2.45 | 37.22 | 4.00 |
2713 | 2814 | 1.374252 | CGAAGGCACGCAACTAGGT | 60.374 | 57.895 | 0.00 | 0.00 | 0.00 | 3.08 |
2714 | 2815 | 0.108992 | TACGAAGGCACGCAACTAGG | 60.109 | 55.000 | 0.00 | 0.00 | 36.70 | 3.02 |
2715 | 2816 | 1.269166 | CTACGAAGGCACGCAACTAG | 58.731 | 55.000 | 0.00 | 0.00 | 36.70 | 2.57 |
2716 | 2817 | 0.108992 | CCTACGAAGGCACGCAACTA | 60.109 | 55.000 | 0.00 | 0.00 | 35.64 | 2.24 |
2717 | 2818 | 1.374252 | CCTACGAAGGCACGCAACT | 60.374 | 57.895 | 0.00 | 0.00 | 35.64 | 3.16 |
2718 | 2819 | 3.165498 | CCTACGAAGGCACGCAAC | 58.835 | 61.111 | 0.00 | 0.00 | 35.64 | 4.17 |
2726 | 2827 | 3.378339 | CGGTAGTTATTGCCTACGAAGG | 58.622 | 50.000 | 0.00 | 0.00 | 46.76 | 3.46 |
2727 | 2828 | 2.793232 | GCGGTAGTTATTGCCTACGAAG | 59.207 | 50.000 | 0.00 | 0.00 | 36.48 | 3.79 |
2728 | 2829 | 2.795681 | CGCGGTAGTTATTGCCTACGAA | 60.796 | 50.000 | 0.00 | 0.00 | 36.48 | 3.85 |
2729 | 2830 | 1.268692 | CGCGGTAGTTATTGCCTACGA | 60.269 | 52.381 | 0.00 | 0.00 | 36.48 | 3.43 |
2730 | 2831 | 1.126079 | CGCGGTAGTTATTGCCTACG | 58.874 | 55.000 | 0.00 | 0.00 | 36.48 | 3.51 |
2731 | 2832 | 2.033801 | TCTCGCGGTAGTTATTGCCTAC | 59.966 | 50.000 | 6.13 | 0.00 | 35.18 | 3.18 |
2732 | 2833 | 2.300433 | TCTCGCGGTAGTTATTGCCTA | 58.700 | 47.619 | 6.13 | 0.00 | 0.00 | 3.93 |
2733 | 2834 | 1.108776 | TCTCGCGGTAGTTATTGCCT | 58.891 | 50.000 | 6.13 | 0.00 | 0.00 | 4.75 |
2734 | 2835 | 1.591619 | GTTCTCGCGGTAGTTATTGCC | 59.408 | 52.381 | 6.13 | 0.00 | 0.00 | 4.52 |
2735 | 2836 | 1.591619 | GGTTCTCGCGGTAGTTATTGC | 59.408 | 52.381 | 6.13 | 0.00 | 0.00 | 3.56 |
2736 | 2837 | 2.858344 | CTGGTTCTCGCGGTAGTTATTG | 59.142 | 50.000 | 6.13 | 0.00 | 0.00 | 1.90 |
2737 | 2838 | 2.737679 | GCTGGTTCTCGCGGTAGTTATT | 60.738 | 50.000 | 6.13 | 0.00 | 0.00 | 1.40 |
2738 | 2839 | 1.202382 | GCTGGTTCTCGCGGTAGTTAT | 60.202 | 52.381 | 6.13 | 0.00 | 0.00 | 1.89 |
2739 | 2840 | 0.171903 | GCTGGTTCTCGCGGTAGTTA | 59.828 | 55.000 | 6.13 | 0.00 | 0.00 | 2.24 |
2740 | 2841 | 1.080025 | GCTGGTTCTCGCGGTAGTT | 60.080 | 57.895 | 6.13 | 0.00 | 0.00 | 2.24 |
2741 | 2842 | 2.572284 | GCTGGTTCTCGCGGTAGT | 59.428 | 61.111 | 6.13 | 0.00 | 0.00 | 2.73 |
2742 | 2843 | 2.202756 | GGCTGGTTCTCGCGGTAG | 60.203 | 66.667 | 6.13 | 0.00 | 0.00 | 3.18 |
2743 | 2844 | 1.895020 | ATTGGCTGGTTCTCGCGGTA | 61.895 | 55.000 | 6.13 | 0.00 | 0.00 | 4.02 |
2744 | 2845 | 1.895020 | TATTGGCTGGTTCTCGCGGT | 61.895 | 55.000 | 6.13 | 0.00 | 0.00 | 5.68 |
2745 | 2846 | 1.153449 | TATTGGCTGGTTCTCGCGG | 60.153 | 57.895 | 6.13 | 0.00 | 0.00 | 6.46 |
2746 | 2847 | 0.179111 | TCTATTGGCTGGTTCTCGCG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.87 |
2747 | 2848 | 2.024176 | TTCTATTGGCTGGTTCTCGC | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2748 | 2849 | 3.375299 | CCTTTTCTATTGGCTGGTTCTCG | 59.625 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
2749 | 2850 | 4.336280 | ACCTTTTCTATTGGCTGGTTCTC | 58.664 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
2750 | 2851 | 4.336280 | GACCTTTTCTATTGGCTGGTTCT | 58.664 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2751 | 2852 | 3.127030 | CGACCTTTTCTATTGGCTGGTTC | 59.873 | 47.826 | 0.00 | 0.00 | 0.00 | 3.62 |
2752 | 2853 | 3.081804 | CGACCTTTTCTATTGGCTGGTT | 58.918 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
2753 | 2854 | 2.304761 | TCGACCTTTTCTATTGGCTGGT | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2754 | 2855 | 2.939103 | CTCGACCTTTTCTATTGGCTGG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2755 | 2856 | 2.352960 | GCTCGACCTTTTCTATTGGCTG | 59.647 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2756 | 2857 | 2.633488 | GCTCGACCTTTTCTATTGGCT | 58.367 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
2757 | 2858 | 1.327764 | CGCTCGACCTTTTCTATTGGC | 59.672 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
2758 | 2859 | 2.618053 | ACGCTCGACCTTTTCTATTGG | 58.382 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2759 | 2860 | 4.663636 | AAACGCTCGACCTTTTCTATTG | 57.336 | 40.909 | 0.00 | 0.00 | 0.00 | 1.90 |
2760 | 2861 | 4.612939 | GCAAAACGCTCGACCTTTTCTATT | 60.613 | 41.667 | 0.00 | 0.00 | 37.77 | 1.73 |
2761 | 2862 | 3.120304 | GCAAAACGCTCGACCTTTTCTAT | 60.120 | 43.478 | 0.00 | 0.00 | 37.77 | 1.98 |
2762 | 2863 | 2.222445 | GCAAAACGCTCGACCTTTTCTA | 59.778 | 45.455 | 0.00 | 0.00 | 37.77 | 2.10 |
2763 | 2864 | 1.002792 | GCAAAACGCTCGACCTTTTCT | 60.003 | 47.619 | 0.00 | 0.00 | 37.77 | 2.52 |
2764 | 2865 | 1.268335 | TGCAAAACGCTCGACCTTTTC | 60.268 | 47.619 | 0.00 | 0.00 | 43.06 | 2.29 |
2765 | 2866 | 0.736053 | TGCAAAACGCTCGACCTTTT | 59.264 | 45.000 | 0.00 | 0.00 | 43.06 | 2.27 |
2766 | 2867 | 0.951558 | ATGCAAAACGCTCGACCTTT | 59.048 | 45.000 | 0.00 | 0.00 | 43.06 | 3.11 |
2767 | 2868 | 0.238289 | CATGCAAAACGCTCGACCTT | 59.762 | 50.000 | 0.00 | 0.00 | 43.06 | 3.50 |
2768 | 2869 | 1.868997 | CATGCAAAACGCTCGACCT | 59.131 | 52.632 | 0.00 | 0.00 | 43.06 | 3.85 |
2769 | 2870 | 1.797537 | GCATGCAAAACGCTCGACC | 60.798 | 57.895 | 14.21 | 0.00 | 43.06 | 4.79 |
2770 | 2871 | 2.139811 | CGCATGCAAAACGCTCGAC | 61.140 | 57.895 | 19.57 | 0.00 | 43.06 | 4.20 |
2771 | 2872 | 2.173141 | CGCATGCAAAACGCTCGA | 59.827 | 55.556 | 19.57 | 0.00 | 43.06 | 4.04 |
2772 | 2873 | 2.871080 | CCGCATGCAAAACGCTCG | 60.871 | 61.111 | 19.57 | 0.00 | 43.06 | 5.03 |
2773 | 2874 | 3.174573 | GCCGCATGCAAAACGCTC | 61.175 | 61.111 | 19.57 | 0.00 | 43.06 | 5.03 |
2774 | 2875 | 4.722855 | GGCCGCATGCAAAACGCT | 62.723 | 61.111 | 19.57 | 0.00 | 43.89 | 5.07 |
2776 | 2877 | 3.969642 | GAGGGCCGCATGCAAAACG | 62.970 | 63.158 | 19.57 | 0.00 | 43.89 | 3.60 |
2777 | 2878 | 1.312371 | TAGAGGGCCGCATGCAAAAC | 61.312 | 55.000 | 19.57 | 4.88 | 43.89 | 2.43 |
2778 | 2879 | 0.610509 | TTAGAGGGCCGCATGCAAAA | 60.611 | 50.000 | 19.57 | 0.00 | 43.89 | 2.44 |
2779 | 2880 | 0.395586 | ATTAGAGGGCCGCATGCAAA | 60.396 | 50.000 | 19.57 | 0.00 | 43.89 | 3.68 |
2780 | 2881 | 0.395586 | AATTAGAGGGCCGCATGCAA | 60.396 | 50.000 | 19.57 | 1.51 | 43.89 | 4.08 |
2781 | 2882 | 0.819259 | GAATTAGAGGGCCGCATGCA | 60.819 | 55.000 | 19.57 | 0.00 | 43.89 | 3.96 |
2782 | 2883 | 0.819259 | TGAATTAGAGGGCCGCATGC | 60.819 | 55.000 | 10.70 | 7.91 | 40.16 | 4.06 |
2783 | 2884 | 1.233019 | CTGAATTAGAGGGCCGCATG | 58.767 | 55.000 | 10.70 | 0.00 | 0.00 | 4.06 |
2784 | 2885 | 0.109342 | CCTGAATTAGAGGGCCGCAT | 59.891 | 55.000 | 10.70 | 0.00 | 0.00 | 4.73 |
2785 | 2886 | 0.980754 | TCCTGAATTAGAGGGCCGCA | 60.981 | 55.000 | 10.70 | 0.00 | 0.00 | 5.69 |
2786 | 2887 | 0.533085 | GTCCTGAATTAGAGGGCCGC | 60.533 | 60.000 | 0.00 | 0.00 | 0.00 | 6.53 |
2787 | 2888 | 0.249489 | CGTCCTGAATTAGAGGGCCG | 60.249 | 60.000 | 0.00 | 3.03 | 30.76 | 6.13 |
2788 | 2889 | 0.533085 | GCGTCCTGAATTAGAGGGCC | 60.533 | 60.000 | 0.00 | 0.00 | 30.76 | 5.80 |
2789 | 2890 | 0.533085 | GGCGTCCTGAATTAGAGGGC | 60.533 | 60.000 | 3.65 | 1.09 | 36.50 | 5.19 |
2790 | 2891 | 1.123928 | AGGCGTCCTGAATTAGAGGG | 58.876 | 55.000 | 3.65 | 0.00 | 29.57 | 4.30 |
2801 | 2902 | 1.889530 | GAGCAGGTTACAGGCGTCCT | 61.890 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2802 | 2903 | 1.448013 | GAGCAGGTTACAGGCGTCC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2803 | 2904 | 1.014564 | GTGAGCAGGTTACAGGCGTC | 61.015 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2804 | 2905 | 1.004918 | GTGAGCAGGTTACAGGCGT | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
2805 | 2906 | 2.094659 | CGTGAGCAGGTTACAGGCG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
2806 | 2907 | 1.741770 | CCGTGAGCAGGTTACAGGC | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2807 | 2908 | 1.079127 | CCCGTGAGCAGGTTACAGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
2808 | 2909 | 0.389948 | GTCCCGTGAGCAGGTTACAG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2809 | 2910 | 0.830444 | AGTCCCGTGAGCAGGTTACA | 60.830 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2810 | 2911 | 0.320697 | AAGTCCCGTGAGCAGGTTAC | 59.679 | 55.000 | 0.00 | 0.00 | 0.00 | 2.50 |
2811 | 2912 | 1.927487 | TAAGTCCCGTGAGCAGGTTA | 58.073 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2812 | 2913 | 1.053424 | TTAAGTCCCGTGAGCAGGTT | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
2813 | 2914 | 1.053424 | TTTAAGTCCCGTGAGCAGGT | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2814 | 2915 | 2.178912 | TTTTAAGTCCCGTGAGCAGG | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2815 | 2916 | 2.678336 | GGATTTTAAGTCCCGTGAGCAG | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2816 | 2917 | 2.617021 | GGGATTTTAAGTCCCGTGAGCA | 60.617 | 50.000 | 9.79 | 0.00 | 45.47 | 4.26 |
2817 | 2918 | 2.014857 | GGGATTTTAAGTCCCGTGAGC | 58.985 | 52.381 | 9.79 | 0.00 | 45.47 | 4.26 |
2824 | 2925 | 1.207811 | TCCGTCCGGGATTTTAAGTCC | 59.792 | 52.381 | 0.00 | 0.00 | 40.94 | 3.85 |
2825 | 2926 | 2.547826 | CTCCGTCCGGGATTTTAAGTC | 58.452 | 52.381 | 0.00 | 0.00 | 46.04 | 3.01 |
2826 | 2927 | 1.208776 | CCTCCGTCCGGGATTTTAAGT | 59.791 | 52.381 | 0.00 | 0.00 | 46.04 | 2.24 |
2827 | 2928 | 1.208776 | ACCTCCGTCCGGGATTTTAAG | 59.791 | 52.381 | 0.00 | 0.00 | 46.04 | 1.85 |
2828 | 2929 | 1.278537 | ACCTCCGTCCGGGATTTTAA | 58.721 | 50.000 | 0.00 | 0.00 | 46.04 | 1.52 |
2829 | 2930 | 2.034124 | CTACCTCCGTCCGGGATTTTA | 58.966 | 52.381 | 0.00 | 0.00 | 46.04 | 1.52 |
2830 | 2931 | 0.828677 | CTACCTCCGTCCGGGATTTT | 59.171 | 55.000 | 0.00 | 0.00 | 46.04 | 1.82 |
2831 | 2932 | 0.325016 | ACTACCTCCGTCCGGGATTT | 60.325 | 55.000 | 0.00 | 0.00 | 46.04 | 2.17 |
2832 | 2933 | 0.552848 | TACTACCTCCGTCCGGGATT | 59.447 | 55.000 | 0.00 | 0.00 | 46.04 | 3.01 |
2833 | 2934 | 0.776176 | ATACTACCTCCGTCCGGGAT | 59.224 | 55.000 | 0.00 | 0.00 | 46.04 | 3.85 |
2834 | 2935 | 1.434188 | TATACTACCTCCGTCCGGGA | 58.566 | 55.000 | 0.00 | 0.00 | 44.68 | 5.14 |
2835 | 2936 | 2.089980 | CATATACTACCTCCGTCCGGG | 58.910 | 57.143 | 0.00 | 0.00 | 35.59 | 5.73 |
2836 | 2937 | 1.471684 | GCATATACTACCTCCGTCCGG | 59.528 | 57.143 | 0.00 | 0.00 | 0.00 | 5.14 |
2837 | 2938 | 2.434428 | AGCATATACTACCTCCGTCCG | 58.566 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2838 | 2939 | 6.527057 | AATTAGCATATACTACCTCCGTCC | 57.473 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2839 | 2940 | 7.871463 | ACAAAATTAGCATATACTACCTCCGTC | 59.129 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
2840 | 2941 | 7.732996 | ACAAAATTAGCATATACTACCTCCGT | 58.267 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
2841 | 2942 | 9.136952 | GTACAAAATTAGCATATACTACCTCCG | 57.863 | 37.037 | 0.00 | 0.00 | 0.00 | 4.63 |
2886 | 2987 | 8.492673 | TTTGATGTCTATTATGAGGACACAAC | 57.507 | 34.615 | 0.00 | 0.00 | 41.75 | 3.32 |
2891 | 2992 | 8.778358 | GGTCATTTTGATGTCTATTATGAGGAC | 58.222 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2998 | 3099 | 1.133513 | AGGTGAACACAATGAAGCCCA | 60.134 | 47.619 | 7.25 | 0.00 | 0.00 | 5.36 |
3019 | 3121 | 6.825721 | TGCAAAATTGGTCAATAAACTTTGGT | 59.174 | 30.769 | 14.85 | 0.00 | 30.97 | 3.67 |
3022 | 3124 | 8.729805 | TTCTGCAAAATTGGTCAATAAACTTT | 57.270 | 26.923 | 0.00 | 0.00 | 0.00 | 2.66 |
3053 | 3155 | 1.239347 | GTGAAACCAGCTGAACCTCC | 58.761 | 55.000 | 17.39 | 0.00 | 0.00 | 4.30 |
3097 | 3199 | 3.181500 | GGCCCGTCTGTTCATTATGTTTC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 2.78 |
3123 | 3227 | 6.141685 | CGTTTGAATGGAAAAGACTAAAACCG | 59.858 | 38.462 | 0.00 | 0.00 | 0.00 | 4.44 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.