Multiple sequence alignment - TraesCS1A01G445600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G445600 chr1A 100.000 6751 0 0 1467 8217 593295693 593302443 0.000000e+00 12467.0
1 TraesCS1A01G445600 chr1A 100.000 1161 0 0 1 1161 593294227 593295387 0.000000e+00 2145.0
2 TraesCS1A01G445600 chr1A 91.228 570 50 0 5 574 3580390 3579821 0.000000e+00 776.0
3 TraesCS1A01G445600 chr1A 90.750 573 53 0 2 574 27214174 27214746 0.000000e+00 765.0
4 TraesCS1A01G445600 chr1A 87.988 333 29 5 6310 6639 593300373 593300697 4.650000e-102 383.0
5 TraesCS1A01G445600 chr1A 87.988 333 29 5 6147 6471 593300536 593300865 4.650000e-102 383.0
6 TraesCS1A01G445600 chr1A 89.416 274 29 0 2390 2663 593296394 593296667 6.100000e-91 346.0
7 TraesCS1A01G445600 chr1A 89.416 274 29 0 2168 2441 593296616 593296889 6.100000e-91 346.0
8 TraesCS1A01G445600 chr1A 83.456 272 25 11 7575 7842 399379979 399380234 1.380000e-57 235.0
9 TraesCS1A01G445600 chr1A 85.572 201 24 3 4517 4716 593298701 593298897 1.080000e-48 206.0
10 TraesCS1A01G445600 chr1A 85.572 201 24 3 4475 4671 593298743 593298942 1.080000e-48 206.0
11 TraesCS1A01G445600 chr1A 82.143 196 11 2 7951 8127 399380370 399380560 6.650000e-31 147.0
12 TraesCS1A01G445600 chr1A 100.000 41 0 0 7907 7947 399380247 399380287 8.840000e-10 76.8
13 TraesCS1A01G445600 chr1D 93.715 1973 82 11 4517 6471 494555019 494556967 0.000000e+00 2918.0
14 TraesCS1A01G445600 chr1D 94.404 1108 32 11 2390 3497 494553036 494554113 0.000000e+00 1676.0
15 TraesCS1A01G445600 chr1D 88.158 1444 58 33 6310 7717 494556640 494558006 0.000000e+00 1615.0
16 TraesCS1A01G445600 chr1D 98.611 576 8 0 1 576 494548932 494549507 0.000000e+00 1020.0
17 TraesCS1A01G445600 chr1D 96.360 577 18 1 4095 4671 494554642 494555215 0.000000e+00 946.0
18 TraesCS1A01G445600 chr1D 90.941 574 50 2 2 574 449226 449798 0.000000e+00 771.0
19 TraesCS1A01G445600 chr1D 96.970 363 10 1 3494 3856 494554026 494554387 7.050000e-170 608.0
20 TraesCS1A01G445600 chr1D 85.913 575 42 9 1934 2478 494552772 494553337 1.990000e-160 577.0
21 TraesCS1A01G445600 chr1D 94.340 265 14 1 3796 4059 494554380 494554644 9.930000e-109 405.0
22 TraesCS1A01G445600 chr1D 83.630 281 17 14 7575 7845 114771760 114771499 3.830000e-58 237.0
23 TraesCS1A01G445600 chr1D 82.927 205 13 8 840 1038 494552177 494552365 1.830000e-36 165.0
24 TraesCS1A01G445600 chr1D 82.126 207 12 6 7940 8127 114771381 114771181 3.970000e-33 154.0
25 TraesCS1A01G445600 chr1D 82.266 203 11 4 7947 8129 494558722 494558919 1.430000e-32 152.0
26 TraesCS1A01G445600 chr1D 86.139 101 8 3 1487 1587 494552598 494552692 4.060000e-18 104.0
27 TraesCS1A01G445600 chr1D 74.757 309 36 20 2449 2755 489725778 489726046 5.250000e-17 100.0
28 TraesCS1A01G445600 chr1D 97.561 41 1 0 7907 7947 114771486 114771446 4.110000e-08 71.3
29 TraesCS1A01G445600 chrUn 92.547 1637 72 13 4517 6145 9571598 9573192 0.000000e+00 2302.0
30 TraesCS1A01G445600 chrUn 95.038 1169 50 6 3507 4671 9570630 9571794 0.000000e+00 1831.0
31 TraesCS1A01G445600 chrUn 93.020 831 49 2 2675 3505 330273145 330272324 0.000000e+00 1205.0
32 TraesCS1A01G445600 chrUn 86.681 961 64 25 6477 7408 9573286 9574211 0.000000e+00 1007.0
33 TraesCS1A01G445600 chrUn 85.895 475 49 12 2020 2478 330273639 330273167 2.670000e-134 490.0
34 TraesCS1A01G445600 chrUn 92.308 286 19 2 2390 2672 330273479 330273194 3.570000e-108 403.0
35 TraesCS1A01G445600 chrUn 83.562 73 10 1 2712 2782 330273176 330273104 5.320000e-07 67.6
36 TraesCS1A01G445600 chr1B 91.474 1642 63 18 4517 6145 687797026 687798603 0.000000e+00 2185.0
37 TraesCS1A01G445600 chr1B 95.336 1265 49 5 3410 4671 687795965 687797222 0.000000e+00 2001.0
38 TraesCS1A01G445600 chr1B 92.743 1185 56 12 2390 3568 687794879 687796039 0.000000e+00 1685.0
39 TraesCS1A01G445600 chr1B 96.875 576 18 0 1 576 687787471 687788046 0.000000e+00 965.0
40 TraesCS1A01G445600 chr1B 89.557 699 47 12 6681 7373 687798892 687799570 0.000000e+00 863.0
41 TraesCS1A01G445600 chr1B 91.274 573 50 0 2 574 4760410 4759838 0.000000e+00 782.0
42 TraesCS1A01G445600 chr1B 91.053 570 51 0 2 571 4116579 4117148 0.000000e+00 771.0
43 TraesCS1A01G445600 chr1B 90.893 571 48 4 6 574 4481622 4481054 0.000000e+00 763.0
44 TraesCS1A01G445600 chr1B 87.273 440 38 13 2020 2441 687794719 687795158 3.450000e-133 486.0
45 TraesCS1A01G445600 chr1B 88.650 326 29 6 7203 7521 212992306 212991982 2.780000e-104 390.0
46 TraesCS1A01G445600 chr1B 81.402 371 51 12 4282 4646 231331135 231331493 3.750000e-73 287.0
47 TraesCS1A01G445600 chr1B 83.636 275 31 5 3149 3417 681991178 681991444 6.370000e-61 246.0
48 TraesCS1A01G445600 chr1B 85.000 240 30 1 3147 3380 682076471 682076232 1.070000e-58 239.0
49 TraesCS1A01G445600 chr1B 78.055 401 23 39 7575 7947 687799670 687800033 8.420000e-45 193.0
50 TraesCS1A01G445600 chr1B 90.099 101 10 0 5141 5241 231331888 231331988 1.860000e-26 132.0
51 TraesCS1A01G445600 chr1B 74.307 397 54 24 2391 2782 682076850 682076497 3.110000e-24 124.0
52 TraesCS1A01G445600 chr1B 79.126 206 24 11 834 1038 687793328 687793515 3.110000e-24 124.0
53 TraesCS1A01G445600 chr1B 90.323 93 8 1 4634 4726 231331346 231331437 4.030000e-23 121.0
54 TraesCS1A01G445600 chr1B 94.667 75 4 0 7439 7513 687799596 687799670 5.210000e-22 117.0
55 TraesCS1A01G445600 chr1B 79.024 205 15 8 7947 8124 687800126 687800329 1.870000e-21 115.0
56 TraesCS1A01G445600 chr1B 83.594 128 9 8 7702 7824 212991879 212991759 8.720000e-20 110.0
57 TraesCS1A01G445600 chr1B 80.263 152 23 4 3866 4011 684580500 684580650 3.140000e-19 108.0
58 TraesCS1A01G445600 chr1B 81.955 133 11 10 7702 7828 190110253 190110128 5.250000e-17 100.0
59 TraesCS1A01G445600 chr1B 77.005 187 25 10 2449 2634 681990855 681991024 3.160000e-14 91.6
60 TraesCS1A01G445600 chr1B 100.000 32 0 0 7612 7643 190110327 190110296 8.910000e-05 60.2
61 TraesCS1A01G445600 chr1B 100.000 32 0 0 7612 7643 212991953 212991922 8.910000e-05 60.2
62 TraesCS1A01G445600 chr3D 90.702 570 53 0 5 574 560056069 560055500 0.000000e+00 760.0
63 TraesCS1A01G445600 chr5B 88.235 323 29 7 7203 7518 317918192 317918512 2.160000e-100 377.0
64 TraesCS1A01G445600 chr5B 85.088 114 7 7 7714 7824 317918633 317918739 3.140000e-19 108.0
65 TraesCS1A01G445600 chr5B 100.000 32 0 0 7612 7643 317918544 317918575 8.910000e-05 60.2
66 TraesCS1A01G445600 chr7B 86.280 328 35 8 7203 7521 652161206 652160880 1.700000e-91 348.0
67 TraesCS1A01G445600 chr7B 82.963 135 6 8 7700 7824 652160785 652160658 1.130000e-18 106.0
68 TraesCS1A01G445600 chr7B 100.000 31 0 0 7613 7643 652160850 652160820 3.200000e-04 58.4
69 TraesCS1A01G445600 chr5D 85.612 278 13 16 7578 7845 44429850 44429590 4.890000e-67 267.0
70 TraesCS1A01G445600 chr4D 84.532 278 17 12 7575 7845 71657324 71657066 1.370000e-62 252.0
71 TraesCS1A01G445600 chr4D 100.000 41 0 0 7907 7947 71657053 71657013 8.840000e-10 76.8
72 TraesCS1A01G445600 chr4A 83.513 279 20 17 7575 7845 315621848 315621588 3.830000e-58 237.0
73 TraesCS1A01G445600 chr7D 78.682 258 15 19 1468 1705 405691628 405691391 1.440000e-27 135.0
74 TraesCS1A01G445600 chr7D 85.000 100 9 1 1799 1898 405690872 405690779 6.790000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G445600 chr1A 593294227 593302443 8216 False 7306.000000 12467 100.000000 1 8217 2 chr1A.!!$F3 8216
1 TraesCS1A01G445600 chr1A 3579821 3580390 569 True 776.000000 776 91.228000 5 574 1 chr1A.!!$R1 569
2 TraesCS1A01G445600 chr1A 27214174 27214746 572 False 765.000000 765 90.750000 2 574 1 chr1A.!!$F1 572
3 TraesCS1A01G445600 chr1A 593296394 593300865 4471 False 311.666667 383 87.658667 2168 6639 6 chr1A.!!$F4 4471
4 TraesCS1A01G445600 chr1D 494548932 494558919 9987 False 926.000000 2918 90.891182 1 8129 11 chr1D.!!$F3 8128
5 TraesCS1A01G445600 chr1D 449226 449798 572 False 771.000000 771 90.941000 2 574 1 chr1D.!!$F1 572
6 TraesCS1A01G445600 chrUn 9570630 9574211 3581 False 1713.333333 2302 91.422000 3507 7408 3 chrUn.!!$F1 3901
7 TraesCS1A01G445600 chrUn 330272324 330273639 1315 True 541.400000 1205 88.696250 2020 3505 4 chrUn.!!$R1 1485
8 TraesCS1A01G445600 chr1B 687787471 687788046 575 False 965.000000 965 96.875000 1 576 1 chr1B.!!$F3 575
9 TraesCS1A01G445600 chr1B 687793328 687800329 7001 False 863.222222 2185 87.472778 834 8124 9 chr1B.!!$F6 7290
10 TraesCS1A01G445600 chr1B 4759838 4760410 572 True 782.000000 782 91.274000 2 574 1 chr1B.!!$R2 572
11 TraesCS1A01G445600 chr1B 4116579 4117148 569 False 771.000000 771 91.053000 2 571 1 chr1B.!!$F1 569
12 TraesCS1A01G445600 chr1B 4481054 4481622 568 True 763.000000 763 90.893000 6 574 1 chr1B.!!$R1 568
13 TraesCS1A01G445600 chr3D 560055500 560056069 569 True 760.000000 760 90.702000 5 574 1 chr3D.!!$R1 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
807 3185 0.393132 GCGAGGGAGGCTTAGCTTTT 60.393 55.000 3.59 0.0 0.00 2.27 F
1868 4584 0.179018 GAGGTGGTGGAGCAAAGTGT 60.179 55.000 0.00 0.0 0.00 3.55 F
1900 4646 0.385223 CGTTGCTCTTGCTGTTGCTC 60.385 55.000 0.00 0.0 40.48 4.26 F
2708 5707 1.768275 TGAAGAACAAGAGGTGCTGGA 59.232 47.619 0.00 0.0 34.74 3.86 F
6670 9874 3.652869 TCAGTTGTTCCTCCCTGATTTCT 59.347 43.478 0.00 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2704 5703 0.109342 ACAACACCTTGCTCCTCCAG 59.891 55.000 0.00 0.00 0.0 3.86 R
2708 5707 0.687354 ATCGACAACACCTTGCTCCT 59.313 50.000 0.00 0.00 0.0 3.69 R
2713 5712 4.822036 TGGTTAAATCGACAACACCTTG 57.178 40.909 8.21 0.00 0.0 3.61 R
6718 9922 2.726351 CCCCCGAGCCAGTTCTCTC 61.726 68.421 0.00 0.00 0.0 3.20 R
8183 11989 0.037605 ACGACTTGGGGATTGACGTC 60.038 55.000 9.11 9.11 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 1.176527 GCAAGCATGGTGAGCCTTTA 58.823 50.000 10.54 0.00 35.27 1.85
337 338 2.916716 GTTGCCGCAATTGTTGTCATAG 59.083 45.455 9.46 0.00 0.00 2.23
479 480 6.072838 ACAGAAGACTTCGACGATAAGTACAA 60.073 38.462 9.53 0.00 37.31 2.41
513 514 5.222048 GGGTGGATATGGCAAGGTCTATAAA 60.222 44.000 0.00 0.00 0.00 1.40
589 1130 0.887387 GGAGCTTTGGCGTGGTTGTA 60.887 55.000 0.00 0.00 44.37 2.41
596 1137 1.624336 TGGCGTGGTTGTACTAGAGT 58.376 50.000 0.00 0.00 0.00 3.24
601 1142 4.321527 GGCGTGGTTGTACTAGAGTTAGTT 60.322 45.833 0.00 0.00 40.55 2.24
602 1143 4.620184 GCGTGGTTGTACTAGAGTTAGTTG 59.380 45.833 0.00 0.00 40.55 3.16
604 1145 6.568462 GCGTGGTTGTACTAGAGTTAGTTGTA 60.568 42.308 0.00 0.00 40.55 2.41
605 1146 6.798959 CGTGGTTGTACTAGAGTTAGTTGTAC 59.201 42.308 0.00 0.00 40.55 2.90
606 1147 7.087007 GTGGTTGTACTAGAGTTAGTTGTACC 58.913 42.308 0.00 0.00 40.55 3.34
607 1148 7.006509 TGGTTGTACTAGAGTTAGTTGTACCT 58.993 38.462 0.00 0.00 40.55 3.08
608 1149 7.175641 TGGTTGTACTAGAGTTAGTTGTACCTC 59.824 40.741 0.00 0.00 40.55 3.85
609 1150 7.362487 GGTTGTACTAGAGTTAGTTGTACCTCC 60.362 44.444 0.00 0.00 40.55 4.30
610 1151 6.782986 TGTACTAGAGTTAGTTGTACCTCCA 58.217 40.000 0.00 0.00 40.55 3.86
611 1152 7.408543 TGTACTAGAGTTAGTTGTACCTCCAT 58.591 38.462 0.00 0.00 40.55 3.41
641 1182 4.734398 TGATATTGGGATTGGTTTGTGC 57.266 40.909 0.00 0.00 0.00 4.57
642 1183 4.092279 TGATATTGGGATTGGTTTGTGCA 58.908 39.130 0.00 0.00 0.00 4.57
652 3007 2.495084 TGGTTTGTGCAGCGTGTAATA 58.505 42.857 0.00 0.00 0.00 0.98
667 3022 5.116377 GCGTGTAATATGTTGTTGTTGTTGG 59.884 40.000 0.00 0.00 0.00 3.77
674 3029 2.164624 TGTTGTTGTTGTTGGGTAGCAC 59.835 45.455 0.00 0.00 0.00 4.40
685 3040 2.827755 TGGGTAGCACATTCCTCTACA 58.172 47.619 0.00 0.00 35.58 2.74
686 3041 3.178046 TGGGTAGCACATTCCTCTACAA 58.822 45.455 0.00 0.00 35.58 2.41
687 3042 3.197766 TGGGTAGCACATTCCTCTACAAG 59.802 47.826 0.00 0.00 35.58 3.16
688 3043 3.451178 GGGTAGCACATTCCTCTACAAGA 59.549 47.826 0.00 0.00 35.58 3.02
707 3062 9.877178 CTACAAGAAAGATTGACTATACCTTGT 57.123 33.333 0.00 0.00 34.20 3.16
709 3064 9.574516 ACAAGAAAGATTGACTATACCTTGTTT 57.425 29.630 0.00 0.00 34.20 2.83
711 3066 8.794335 AGAAAGATTGACTATACCTTGTTTCC 57.206 34.615 0.00 0.00 0.00 3.13
712 3067 8.383175 AGAAAGATTGACTATACCTTGTTTCCA 58.617 33.333 0.00 0.00 0.00 3.53
713 3068 9.178758 GAAAGATTGACTATACCTTGTTTCCAT 57.821 33.333 0.00 0.00 0.00 3.41
714 3069 9.533831 AAAGATTGACTATACCTTGTTTCCATT 57.466 29.630 0.00 0.00 0.00 3.16
715 3070 9.533831 AAGATTGACTATACCTTGTTTCCATTT 57.466 29.630 0.00 0.00 0.00 2.32
716 3071 8.960591 AGATTGACTATACCTTGTTTCCATTTG 58.039 33.333 0.00 0.00 0.00 2.32
717 3072 6.509418 TGACTATACCTTGTTTCCATTTGC 57.491 37.500 0.00 0.00 0.00 3.68
718 3073 6.007076 TGACTATACCTTGTTTCCATTTGCA 58.993 36.000 0.00 0.00 0.00 4.08
719 3074 6.072175 TGACTATACCTTGTTTCCATTTGCAC 60.072 38.462 0.00 0.00 0.00 4.57
720 3075 6.010219 ACTATACCTTGTTTCCATTTGCACT 58.990 36.000 0.00 0.00 0.00 4.40
722 3077 6.909550 ATACCTTGTTTCCATTTGCACTTA 57.090 33.333 0.00 0.00 0.00 2.24
724 3079 6.909550 ACCTTGTTTCCATTTGCACTTATA 57.090 33.333 0.00 0.00 0.00 0.98
741 3107 7.014518 TGCACTTATATTTTGAGAATGATGGGG 59.985 37.037 0.00 0.00 0.00 4.96
749 3127 1.378514 GAATGATGGGGGCGTGTGT 60.379 57.895 0.00 0.00 0.00 3.72
750 3128 1.656818 GAATGATGGGGGCGTGTGTG 61.657 60.000 0.00 0.00 0.00 3.82
764 3142 4.142708 GGCGTGTGTGTGATTGATTGATTA 60.143 41.667 0.00 0.00 0.00 1.75
766 3144 5.163864 GCGTGTGTGTGATTGATTGATTAGA 60.164 40.000 0.00 0.00 0.00 2.10
767 3145 6.457392 GCGTGTGTGTGATTGATTGATTAGAT 60.457 38.462 0.00 0.00 0.00 1.98
768 3146 7.466805 CGTGTGTGTGATTGATTGATTAGATT 58.533 34.615 0.00 0.00 0.00 2.40
769 3147 7.427318 CGTGTGTGTGATTGATTGATTAGATTG 59.573 37.037 0.00 0.00 0.00 2.67
770 3148 7.699391 GTGTGTGTGATTGATTGATTAGATTGG 59.301 37.037 0.00 0.00 0.00 3.16
771 3149 7.148035 TGTGTGTGATTGATTGATTAGATTGGG 60.148 37.037 0.00 0.00 0.00 4.12
772 3150 6.321945 TGTGTGATTGATTGATTAGATTGGGG 59.678 38.462 0.00 0.00 0.00 4.96
773 3151 5.302568 TGTGATTGATTGATTAGATTGGGGC 59.697 40.000 0.00 0.00 0.00 5.80
774 3152 5.302568 GTGATTGATTGATTAGATTGGGGCA 59.697 40.000 0.00 0.00 0.00 5.36
775 3153 5.898397 TGATTGATTGATTAGATTGGGGCAA 59.102 36.000 0.00 0.00 0.00 4.52
776 3154 6.383436 TGATTGATTGATTAGATTGGGGCAAA 59.617 34.615 0.00 0.00 0.00 3.68
777 3155 6.811634 TTGATTGATTAGATTGGGGCAAAT 57.188 33.333 0.00 0.00 0.00 2.32
778 3156 7.911130 TTGATTGATTAGATTGGGGCAAATA 57.089 32.000 0.00 0.00 0.00 1.40
784 3162 6.550854 TGATTAGATTGGGGCAAATAGGAAAG 59.449 38.462 0.00 0.00 0.00 2.62
798 3176 2.439156 AAAGCATGCGAGGGAGGC 60.439 61.111 13.01 0.00 0.00 4.70
799 3177 2.883267 GAAAGCATGCGAGGGAGGCT 62.883 60.000 13.01 0.00 36.13 4.58
800 3178 2.490270 AAAGCATGCGAGGGAGGCTT 62.490 55.000 13.01 3.22 45.92 4.35
801 3179 1.626356 AAGCATGCGAGGGAGGCTTA 61.626 55.000 13.01 0.00 42.51 3.09
803 3181 1.596477 CATGCGAGGGAGGCTTAGC 60.596 63.158 0.00 0.00 0.00 3.09
804 3182 1.764054 ATGCGAGGGAGGCTTAGCT 60.764 57.895 3.59 0.00 0.00 3.32
805 3183 1.341156 ATGCGAGGGAGGCTTAGCTT 61.341 55.000 3.59 0.00 0.00 3.74
806 3184 1.222113 GCGAGGGAGGCTTAGCTTT 59.778 57.895 3.59 0.00 0.00 3.51
807 3185 0.393132 GCGAGGGAGGCTTAGCTTTT 60.393 55.000 3.59 0.00 0.00 2.27
808 3186 1.950954 GCGAGGGAGGCTTAGCTTTTT 60.951 52.381 3.59 0.00 0.00 1.94
873 3296 2.952310 GCTTCTTCTCCCTCTCTCTCTC 59.048 54.545 0.00 0.00 0.00 3.20
886 3309 1.822990 TCTCTCTCCGTACGCCATTTT 59.177 47.619 10.49 0.00 0.00 1.82
887 3310 2.232941 TCTCTCTCCGTACGCCATTTTT 59.767 45.455 10.49 0.00 0.00 1.94
908 3331 6.439636 TTTTCCAATCCAAAGAGAGAGAGA 57.560 37.500 0.00 0.00 0.00 3.10
909 3332 5.674052 TTCCAATCCAAAGAGAGAGAGAG 57.326 43.478 0.00 0.00 0.00 3.20
910 3333 4.940483 TCCAATCCAAAGAGAGAGAGAGA 58.060 43.478 0.00 0.00 0.00 3.10
911 3334 4.955450 TCCAATCCAAAGAGAGAGAGAGAG 59.045 45.833 0.00 0.00 0.00 3.20
912 3335 4.099881 CCAATCCAAAGAGAGAGAGAGAGG 59.900 50.000 0.00 0.00 0.00 3.69
913 3336 3.380471 TCCAAAGAGAGAGAGAGAGGG 57.620 52.381 0.00 0.00 0.00 4.30
941 3364 3.436924 GGTTGGGTTTAGCGGGCG 61.437 66.667 0.00 0.00 0.00 6.13
942 3365 3.436924 GTTGGGTTTAGCGGGCGG 61.437 66.667 0.00 0.00 0.00 6.13
955 3378 4.501285 GGCGGGCTAGGGTTTCCC 62.501 72.222 0.00 0.00 45.90 3.97
1105 3581 4.841617 TCTCCTCCGCCATCGCCT 62.842 66.667 0.00 0.00 0.00 5.52
1147 3623 2.612251 CCTCCTCCTCCTCCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
1509 3988 2.430367 GACCAGGACCACCACCAC 59.570 66.667 0.00 0.00 38.94 4.16
1510 3989 3.175710 ACCAGGACCACCACCACC 61.176 66.667 0.00 0.00 38.94 4.61
1511 3990 3.174987 CCAGGACCACCACCACCA 61.175 66.667 0.00 0.00 38.94 4.17
1512 3991 2.113139 CAGGACCACCACCACCAC 59.887 66.667 0.00 0.00 38.94 4.16
1514 3993 3.494254 GGACCACCACCACCACCA 61.494 66.667 0.00 0.00 35.97 4.17
1515 3994 2.203294 GACCACCACCACCACCAC 60.203 66.667 0.00 0.00 0.00 4.16
1517 3996 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1518 3997 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1519 3998 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1520 3999 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1521 4000 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1522 4001 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1523 4002 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1524 4003 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1525 4004 4.183858 ACCACCACCACCACCACG 62.184 66.667 0.00 0.00 0.00 4.94
1526 4005 3.867783 CCACCACCACCACCACGA 61.868 66.667 0.00 0.00 0.00 4.35
1635 4153 2.750350 CACCACCAGGACCAGGAC 59.250 66.667 10.44 0.00 38.69 3.85
1636 4154 2.529389 ACCACCAGGACCAGGACC 60.529 66.667 10.44 0.00 38.69 4.46
1637 4155 2.529136 CCACCAGGACCAGGACCA 60.529 66.667 10.44 0.00 36.89 4.02
1638 4156 2.596851 CCACCAGGACCAGGACCAG 61.597 68.421 10.44 1.76 36.89 4.00
1639 4157 2.203998 ACCAGGACCAGGACCAGG 60.204 66.667 16.54 16.54 39.50 4.45
1640 4158 2.203998 CCAGGACCAGGACCAGGT 60.204 66.667 8.59 8.59 43.46 4.00
1679 4197 3.056313 GCCTGTTGGATGAAGCCGC 62.056 63.158 0.00 0.00 34.57 6.53
1689 4207 4.475135 GAAGCCGCCCTCCACCTC 62.475 72.222 0.00 0.00 0.00 3.85
1695 4213 3.403558 GCCCTCCACCTCCACCTC 61.404 72.222 0.00 0.00 0.00 3.85
1696 4214 2.689034 CCCTCCACCTCCACCTCC 60.689 72.222 0.00 0.00 0.00 4.30
1698 4216 2.294078 CCTCCACCTCCACCTCCAC 61.294 68.421 0.00 0.00 0.00 4.02
1699 4217 2.203938 TCCACCTCCACCTCCACC 60.204 66.667 0.00 0.00 0.00 4.61
1700 4218 2.203998 CCACCTCCACCTCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
1701 4219 2.294078 CCACCTCCACCTCCACCTC 61.294 68.421 0.00 0.00 0.00 3.85
1702 4220 2.122954 ACCTCCACCTCCACCTCC 59.877 66.667 0.00 0.00 0.00 4.30
1703 4221 2.122729 CCTCCACCTCCACCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
1705 4223 2.203938 TCCACCTCCACCTCCACC 60.204 66.667 0.00 0.00 0.00 4.61
1706 4224 2.203998 CCACCTCCACCTCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
1707 4225 2.294078 CCACCTCCACCTCCACCTC 61.294 68.421 0.00 0.00 0.00 3.85
1708 4226 2.122954 ACCTCCACCTCCACCTCC 59.877 66.667 0.00 0.00 0.00 4.30
1709 4227 2.122729 CCTCCACCTCCACCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
1711 4229 2.203938 TCCACCTCCACCTCCACC 60.204 66.667 0.00 0.00 0.00 4.61
1713 4231 2.596851 CCACCTCCACCTCCACCAG 61.597 68.421 0.00 0.00 0.00 4.00
1722 4240 3.393360 CTCCACCAGGACCAGGAC 58.607 66.667 10.44 0.00 39.61 3.85
1723 4241 2.203938 TCCACCAGGACCAGGACC 60.204 66.667 10.44 0.00 39.61 4.46
1724 4242 2.529136 CCACCAGGACCAGGACCA 60.529 66.667 10.44 0.00 36.89 4.02
1726 4244 2.203998 ACCAGGACCAGGACCAGG 60.204 66.667 16.54 16.54 39.50 4.45
1738 4265 2.936032 ACCAGGAGGGCCTCAACC 60.936 66.667 33.27 18.41 44.80 3.77
1771 4349 0.460811 CAAGGACGATGCTGCTGCTA 60.461 55.000 17.00 3.79 40.48 3.49
1772 4350 0.250234 AAGGACGATGCTGCTGCTAA 59.750 50.000 17.00 0.00 40.48 3.09
1773 4351 0.179089 AGGACGATGCTGCTGCTAAG 60.179 55.000 17.00 9.67 40.48 2.18
1775 4353 0.179100 GACGATGCTGCTGCTAAGGA 60.179 55.000 17.00 0.00 40.48 3.36
1776 4354 0.467384 ACGATGCTGCTGCTAAGGAT 59.533 50.000 17.00 0.96 40.48 3.24
1779 4357 2.780714 GATGCTGCTGCTAAGGATGAT 58.219 47.619 17.00 0.00 40.48 2.45
1782 4360 1.872313 GCTGCTGCTAAGGATGATCAC 59.128 52.381 8.53 0.00 36.03 3.06
1783 4361 2.133553 CTGCTGCTAAGGATGATCACG 58.866 52.381 0.00 0.00 0.00 4.35
1785 4363 2.223900 TGCTGCTAAGGATGATCACGAG 60.224 50.000 0.00 0.00 0.00 4.18
1786 4364 2.865670 GCTGCTAAGGATGATCACGAGG 60.866 54.545 0.00 0.00 0.00 4.63
1787 4365 2.625314 CTGCTAAGGATGATCACGAGGA 59.375 50.000 0.00 0.00 0.00 3.71
1791 4369 1.993956 AGGATGATCACGAGGAGGAG 58.006 55.000 0.00 0.00 0.00 3.69
1792 4370 0.965439 GGATGATCACGAGGAGGAGG 59.035 60.000 0.00 0.00 0.00 4.30
1793 4371 1.698506 GATGATCACGAGGAGGAGGT 58.301 55.000 0.00 0.00 0.00 3.85
1795 4373 0.684479 TGATCACGAGGAGGAGGTGG 60.684 60.000 0.00 0.00 32.65 4.61
1796 4374 0.395862 GATCACGAGGAGGAGGTGGA 60.396 60.000 0.00 0.00 32.65 4.02
1800 4378 1.984570 CGAGGAGGAGGTGGAGCAA 60.985 63.158 0.00 0.00 0.00 3.91
1801 4379 1.904032 GAGGAGGAGGTGGAGCAAG 59.096 63.158 0.00 0.00 0.00 4.01
1803 4381 2.674220 GGAGGAGGTGGAGCAAGGG 61.674 68.421 0.00 0.00 0.00 3.95
1804 4382 2.612115 AGGAGGTGGAGCAAGGGG 60.612 66.667 0.00 0.00 0.00 4.79
1805 4383 2.610859 GGAGGTGGAGCAAGGGGA 60.611 66.667 0.00 0.00 0.00 4.81
1806 4384 2.003548 GGAGGTGGAGCAAGGGGAT 61.004 63.158 0.00 0.00 0.00 3.85
1807 4385 1.225704 GAGGTGGAGCAAGGGGATG 59.774 63.158 0.00 0.00 0.00 3.51
1808 4386 2.440980 GGTGGAGCAAGGGGATGC 60.441 66.667 0.00 0.00 46.78 3.91
1814 4392 4.039042 GCAAGGGGATGCAACCAT 57.961 55.556 15.68 3.54 45.70 3.55
1815 4393 3.205815 GCAAGGGGATGCAACCATA 57.794 52.632 15.68 0.00 45.70 2.74
1820 4536 2.421725 AGGGGATGCAACCATAGATGA 58.578 47.619 15.68 0.00 0.00 2.92
1823 4539 3.245016 GGGGATGCAACCATAGATGATGA 60.245 47.826 15.68 0.00 37.82 2.92
1825 4541 5.339447 GGGGATGCAACCATAGATGATGATA 60.339 44.000 15.68 0.00 37.82 2.15
1834 4550 7.012661 ACCATAGATGATGATAATGCTGTCA 57.987 36.000 0.00 0.00 37.82 3.58
1835 4551 7.455891 ACCATAGATGATGATAATGCTGTCAA 58.544 34.615 0.00 0.00 37.82 3.18
1836 4552 7.940688 ACCATAGATGATGATAATGCTGTCAAA 59.059 33.333 0.00 0.00 37.82 2.69
1837 4553 8.235226 CCATAGATGATGATAATGCTGTCAAAC 58.765 37.037 0.00 0.00 37.82 2.93
1838 4554 8.780249 CATAGATGATGATAATGCTGTCAAACA 58.220 33.333 0.00 0.00 37.82 2.83
1839 4555 7.818997 AGATGATGATAATGCTGTCAAACAT 57.181 32.000 0.00 0.00 31.65 2.71
1840 4556 7.872881 AGATGATGATAATGCTGTCAAACATC 58.127 34.615 0.00 0.00 38.81 3.06
1842 4558 7.576861 TGATGATAATGCTGTCAAACATCAT 57.423 32.000 0.00 0.00 36.61 2.45
1843 4559 7.645402 TGATGATAATGCTGTCAAACATCATC 58.355 34.615 12.49 12.49 40.70 2.92
1844 4560 7.283580 TGATGATAATGCTGTCAAACATCATCA 59.716 33.333 16.36 16.36 43.47 3.07
1848 4564 6.465439 AATGCTGTCAAACATCATCATCAT 57.535 33.333 0.00 0.00 34.25 2.45
1864 4580 0.770499 TCATGAGGTGGTGGAGCAAA 59.230 50.000 0.00 0.00 0.00 3.68
1868 4584 0.179018 GAGGTGGTGGAGCAAAGTGT 60.179 55.000 0.00 0.00 0.00 3.55
1869 4585 1.071699 GAGGTGGTGGAGCAAAGTGTA 59.928 52.381 0.00 0.00 0.00 2.90
1870 4586 1.493022 AGGTGGTGGAGCAAAGTGTAA 59.507 47.619 0.00 0.00 0.00 2.41
1875 4621 4.700213 GTGGTGGAGCAAAGTGTAATACAT 59.300 41.667 0.00 0.00 0.00 2.29
1882 4628 4.035558 AGCAAAGTGTAATACATGATGCCG 59.964 41.667 17.43 0.00 34.96 5.69
1883 4629 4.201910 GCAAAGTGTAATACATGATGCCGT 60.202 41.667 0.00 0.00 31.13 5.68
1888 4634 3.559655 TGTAATACATGATGCCGTTGCTC 59.440 43.478 0.00 0.00 38.71 4.26
1896 4642 1.174712 ATGCCGTTGCTCTTGCTGTT 61.175 50.000 0.00 0.00 40.48 3.16
1900 4646 0.385223 CGTTGCTCTTGCTGTTGCTC 60.385 55.000 0.00 0.00 40.48 4.26
1917 4666 4.069300 TGCTCTTGATGATGATCAGGAC 57.931 45.455 2.81 2.35 39.21 3.85
1929 4678 2.373169 TGATCAGGACAAGAAGCCACTT 59.627 45.455 0.00 0.00 0.00 3.16
1930 4679 3.582647 TGATCAGGACAAGAAGCCACTTA 59.417 43.478 0.00 0.00 0.00 2.24
1931 4680 4.225942 TGATCAGGACAAGAAGCCACTTAT 59.774 41.667 0.00 0.00 0.00 1.73
1932 4681 4.640771 TCAGGACAAGAAGCCACTTATT 57.359 40.909 0.00 0.00 0.00 1.40
1966 4715 3.166679 AGTACCACCTCTTCCTCTTGTC 58.833 50.000 0.00 0.00 0.00 3.18
1969 4718 2.104963 ACCACCTCTTCCTCTTGTCAAC 59.895 50.000 0.00 0.00 0.00 3.18
2005 4922 4.396478 CCATGGAGAATGATGATGATGCTC 59.604 45.833 5.56 0.00 38.72 4.26
2007 4924 5.306114 TGGAGAATGATGATGATGCTCTT 57.694 39.130 0.00 0.00 0.00 2.85
2008 4925 5.063880 TGGAGAATGATGATGATGCTCTTG 58.936 41.667 0.00 0.00 0.00 3.02
2009 4926 5.064558 GGAGAATGATGATGATGCTCTTGT 58.935 41.667 0.00 0.00 0.00 3.16
2010 4927 5.049336 GGAGAATGATGATGATGCTCTTGTG 60.049 44.000 0.00 0.00 0.00 3.33
2011 4928 4.276183 AGAATGATGATGATGCTCTTGTGC 59.724 41.667 0.00 0.00 0.00 4.57
2013 4930 3.349022 TGATGATGATGCTCTTGTGCAA 58.651 40.909 1.50 0.00 46.61 4.08
2014 4931 3.377172 TGATGATGATGCTCTTGTGCAAG 59.623 43.478 5.63 5.63 46.61 4.01
2015 4932 2.786777 TGATGATGCTCTTGTGCAAGT 58.213 42.857 11.17 0.00 46.61 3.16
2016 4933 3.151554 TGATGATGCTCTTGTGCAAGTT 58.848 40.909 11.17 0.00 46.61 2.66
2046 4981 3.577389 CCACCCAAGGGATCAAGAC 57.423 57.895 13.15 0.00 38.96 3.01
2704 5703 3.615849 CTGTTGAAGAACAAGAGGTGC 57.384 47.619 0.00 0.00 43.34 5.01
2708 5707 1.768275 TGAAGAACAAGAGGTGCTGGA 59.232 47.619 0.00 0.00 34.74 3.86
6670 9874 3.652869 TCAGTTGTTCCTCCCTGATTTCT 59.347 43.478 0.00 0.00 0.00 2.52
6718 9922 3.645884 CTGTTTCAGGAAGCATTTGGTG 58.354 45.455 0.00 0.00 31.28 4.17
6804 10008 5.244402 AGAAGAGAGCATCATGTATCCTGAG 59.756 44.000 0.00 0.00 37.82 3.35
6819 10023 3.003763 GAGAGGCCCGGTGAACCT 61.004 66.667 0.00 0.71 36.19 3.50
7113 10322 1.467734 CTCTTGTGCAGTGATCTTGCC 59.532 52.381 16.63 10.47 0.00 4.52
7154 10363 5.776744 CTTTGCAATTCTCCTAAAACAGCT 58.223 37.500 0.00 0.00 0.00 4.24
7164 10373 3.333680 TCCTAAAACAGCTTCCCCTTGAT 59.666 43.478 0.00 0.00 0.00 2.57
7188 10397 1.338389 GCCGACTTAACTTGGTGCCTA 60.338 52.381 0.00 0.00 0.00 3.93
7247 10461 1.543429 GGTGTTGTTAGAGCAGGCTGT 60.543 52.381 17.16 2.59 0.00 4.40
7310 10535 4.898861 GGAGTAGGAGGATTCTGATGAACT 59.101 45.833 0.00 0.00 34.71 3.01
7373 10610 4.043073 GCGAGTAGTTGCTAGTTATGTCC 58.957 47.826 2.21 0.00 0.00 4.02
7412 10649 1.334869 CTGTGTTGGTGAAAGGCACTC 59.665 52.381 0.00 0.00 46.86 3.51
7413 10650 0.668535 GTGTTGGTGAAAGGCACTCC 59.331 55.000 0.00 0.00 46.86 3.85
7414 10651 0.467290 TGTTGGTGAAAGGCACTCCC 60.467 55.000 0.00 0.00 46.86 4.30
7416 10653 0.110486 TTGGTGAAAGGCACTCCCTC 59.890 55.000 0.00 0.00 45.62 4.30
7417 10654 1.002011 GGTGAAAGGCACTCCCTCC 60.002 63.158 0.00 0.00 45.62 4.30
7419 10656 1.151810 TGAAAGGCACTCCCTCCCT 60.152 57.895 0.00 0.00 45.62 4.20
7420 10657 1.201429 TGAAAGGCACTCCCTCCCTC 61.201 60.000 0.00 0.00 45.62 4.30
7421 10658 1.916206 GAAAGGCACTCCCTCCCTCC 61.916 65.000 0.00 0.00 45.62 4.30
7422 10659 3.952799 AAGGCACTCCCTCCCTCCC 62.953 68.421 0.00 0.00 45.62 4.30
7423 10660 4.423209 GGCACTCCCTCCCTCCCT 62.423 72.222 0.00 0.00 0.00 4.20
7424 10661 2.766229 GCACTCCCTCCCTCCCTC 60.766 72.222 0.00 0.00 0.00 4.30
7425 10662 2.041405 CACTCCCTCCCTCCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
7426 10663 2.540910 ACTCCCTCCCTCCCTCCA 60.541 66.667 0.00 0.00 0.00 3.86
7427 10664 1.949449 ACTCCCTCCCTCCCTCCAT 60.949 63.158 0.00 0.00 0.00 3.41
7428 10665 1.319799 CTCCCTCCCTCCCTCCATT 59.680 63.158 0.00 0.00 0.00 3.16
7429 10666 0.327964 CTCCCTCCCTCCCTCCATTT 60.328 60.000 0.00 0.00 0.00 2.32
7430 10667 0.624500 TCCCTCCCTCCCTCCATTTG 60.625 60.000 0.00 0.00 0.00 2.32
7431 10668 1.228510 CCTCCCTCCCTCCATTTGC 59.771 63.158 0.00 0.00 0.00 3.68
7432 10669 1.284841 CCTCCCTCCCTCCATTTGCT 61.285 60.000 0.00 0.00 0.00 3.91
7433 10670 1.511613 CTCCCTCCCTCCATTTGCTA 58.488 55.000 0.00 0.00 0.00 3.49
7434 10671 2.061061 CTCCCTCCCTCCATTTGCTAT 58.939 52.381 0.00 0.00 0.00 2.97
7445 10682 3.125146 TCCATTTGCTATCGATTATGCGC 59.875 43.478 1.71 0.00 0.00 6.09
7450 10687 1.525784 GCTATCGATTATGCGCTTGCG 60.526 52.381 9.73 10.90 43.34 4.85
7518 10755 3.641437 TGCAAACTGTAATCTTGGCAC 57.359 42.857 0.00 0.00 0.00 5.01
7521 10758 3.304391 GCAAACTGTAATCTTGGCACGAA 60.304 43.478 0.00 0.00 0.00 3.85
7522 10759 4.219033 CAAACTGTAATCTTGGCACGAAC 58.781 43.478 0.00 0.00 0.00 3.95
7523 10760 3.402628 ACTGTAATCTTGGCACGAACT 57.597 42.857 0.00 0.00 0.00 3.01
7524 10761 4.530710 ACTGTAATCTTGGCACGAACTA 57.469 40.909 0.00 0.00 0.00 2.24
7526 10763 4.242475 CTGTAATCTTGGCACGAACTACA 58.758 43.478 14.46 14.46 0.00 2.74
7527 10764 4.633175 TGTAATCTTGGCACGAACTACAA 58.367 39.130 13.45 0.00 0.00 2.41
7528 10765 5.242434 TGTAATCTTGGCACGAACTACAAT 58.758 37.500 13.45 0.00 0.00 2.71
7529 10766 4.946784 AATCTTGGCACGAACTACAATC 57.053 40.909 0.00 0.00 0.00 2.67
7530 10767 3.678056 TCTTGGCACGAACTACAATCT 57.322 42.857 0.00 0.00 0.00 2.40
7531 10768 3.585862 TCTTGGCACGAACTACAATCTC 58.414 45.455 0.00 0.00 0.00 2.75
7532 10769 3.006430 TCTTGGCACGAACTACAATCTCA 59.994 43.478 0.00 0.00 0.00 3.27
7533 10770 3.394674 TGGCACGAACTACAATCTCAA 57.605 42.857 0.00 0.00 0.00 3.02
7534 10771 3.325870 TGGCACGAACTACAATCTCAAG 58.674 45.455 0.00 0.00 0.00 3.02
7535 10772 3.244078 TGGCACGAACTACAATCTCAAGT 60.244 43.478 0.00 0.00 0.00 3.16
7536 10773 3.123621 GGCACGAACTACAATCTCAAGTG 59.876 47.826 0.00 0.00 0.00 3.16
7537 10774 3.987868 GCACGAACTACAATCTCAAGTGA 59.012 43.478 0.00 0.00 0.00 3.41
7538 10775 4.447724 GCACGAACTACAATCTCAAGTGAA 59.552 41.667 0.00 0.00 0.00 3.18
7539 10776 5.120830 GCACGAACTACAATCTCAAGTGAAT 59.879 40.000 0.00 0.00 0.00 2.57
7540 10777 6.528826 CACGAACTACAATCTCAAGTGAATG 58.471 40.000 0.00 0.00 0.00 2.67
7541 10778 5.120830 ACGAACTACAATCTCAAGTGAATGC 59.879 40.000 0.00 0.00 0.00 3.56
7542 10779 5.349817 CGAACTACAATCTCAAGTGAATGCT 59.650 40.000 0.00 0.00 0.00 3.79
7543 10780 6.492007 AACTACAATCTCAAGTGAATGCTG 57.508 37.500 0.00 0.00 0.00 4.41
7544 10781 5.555017 ACTACAATCTCAAGTGAATGCTGT 58.445 37.500 0.00 0.00 0.00 4.40
7545 10782 5.641209 ACTACAATCTCAAGTGAATGCTGTC 59.359 40.000 0.00 0.00 0.00 3.51
7546 10783 4.649692 ACAATCTCAAGTGAATGCTGTCT 58.350 39.130 0.00 0.00 0.00 3.41
7547 10784 4.694509 ACAATCTCAAGTGAATGCTGTCTC 59.305 41.667 0.00 0.00 0.00 3.36
7554 10791 4.077300 AGTGAATGCTGTCTCAAGTGAA 57.923 40.909 0.00 0.00 0.00 3.18
7577 10814 3.510719 GCTGTCTAGCTAGCATGATAGC 58.489 50.000 30.87 30.87 46.57 2.97
7586 10823 4.573900 GCTAGCATGATAGCAAGGTGTAT 58.426 43.478 32.42 0.00 46.12 2.29
7606 10843 6.203530 GTGTATCATGAATGAACACCGATGAT 59.796 38.462 16.89 0.00 39.75 2.45
7698 10959 6.696148 GCTTAGCTTTCTTGGATCATTTCATG 59.304 38.462 0.00 0.00 0.00 3.07
7699 10960 5.007385 AGCTTTCTTGGATCATTTCATGC 57.993 39.130 0.00 0.00 0.00 4.06
7700 10961 4.464951 AGCTTTCTTGGATCATTTCATGCA 59.535 37.500 0.00 0.00 0.00 3.96
7701 10962 5.128827 AGCTTTCTTGGATCATTTCATGCAT 59.871 36.000 0.00 0.00 0.00 3.96
7726 10987 1.068055 GTTATTGTGCTGCTGCTGCTT 60.068 47.619 27.67 14.68 40.48 3.91
7729 10990 0.176219 TTGTGCTGCTGCTGCTTTTT 59.824 45.000 27.67 0.00 40.48 1.94
7768 11045 6.709281 AGAGAAGAGAAGAAAGATGAATGCA 58.291 36.000 0.00 0.00 0.00 3.96
7769 11046 7.166851 AGAGAAGAGAAGAAAGATGAATGCAA 58.833 34.615 0.00 0.00 0.00 4.08
7770 11047 7.830201 AGAGAAGAGAAGAAAGATGAATGCAAT 59.170 33.333 0.00 0.00 0.00 3.56
7771 11048 9.107177 GAGAAGAGAAGAAAGATGAATGCAATA 57.893 33.333 0.00 0.00 0.00 1.90
7800 11473 8.738199 ATAGGTGTCGTGATTATTACGTATTG 57.262 34.615 9.23 0.00 41.91 1.90
7801 11474 6.798482 AGGTGTCGTGATTATTACGTATTGA 58.202 36.000 9.23 0.00 41.91 2.57
7806 11479 9.955208 TGTCGTGATTATTACGTATTGATTAGT 57.045 29.630 9.23 0.00 41.91 2.24
7839 11512 1.998315 CTGCTAGTACAAGTGCTGCTG 59.002 52.381 0.00 3.93 0.00 4.41
7840 11513 0.723981 GCTAGTACAAGTGCTGCTGC 59.276 55.000 8.89 8.89 40.20 5.25
7841 11514 1.674221 GCTAGTACAAGTGCTGCTGCT 60.674 52.381 17.00 0.00 40.48 4.24
7842 11515 1.998315 CTAGTACAAGTGCTGCTGCTG 59.002 52.381 17.00 9.24 40.48 4.41
7843 11516 1.208614 GTACAAGTGCTGCTGCTGC 59.791 57.895 22.51 22.51 40.48 5.25
7844 11517 1.071987 TACAAGTGCTGCTGCTGCT 59.928 52.632 27.67 12.94 40.48 4.24
7845 11518 1.232621 TACAAGTGCTGCTGCTGCTG 61.233 55.000 27.67 20.81 40.48 4.41
7874 11547 4.741837 GCTGCTGCTAGTTAAGATGGATGA 60.742 45.833 8.53 0.00 36.03 2.92
7875 11548 5.357742 TGCTGCTAGTTAAGATGGATGAA 57.642 39.130 0.00 0.00 0.00 2.57
7876 11549 5.744171 TGCTGCTAGTTAAGATGGATGAAA 58.256 37.500 0.00 0.00 0.00 2.69
7877 11550 5.586243 TGCTGCTAGTTAAGATGGATGAAAC 59.414 40.000 0.00 0.00 0.00 2.78
7878 11551 5.586243 GCTGCTAGTTAAGATGGATGAAACA 59.414 40.000 0.00 0.00 0.00 2.83
7879 11552 6.238320 GCTGCTAGTTAAGATGGATGAAACAG 60.238 42.308 0.00 0.00 0.00 3.16
7880 11553 5.586243 TGCTAGTTAAGATGGATGAAACAGC 59.414 40.000 0.00 0.00 0.00 4.40
7974 11749 5.690997 AGTTTCTTCCGAGGAACAAAATC 57.309 39.130 6.83 0.00 42.83 2.17
8008 11787 7.667219 AGGAGAAGAAGCTAAATGTTGATGAAA 59.333 33.333 0.00 0.00 0.00 2.69
8037 11835 6.206243 AGTTTGTTCCAGATCATCAACTCTTG 59.794 38.462 0.00 0.00 0.00 3.02
8055 11853 2.643995 TGTGATGGTGATATGCTGGG 57.356 50.000 0.00 0.00 0.00 4.45
8093 11899 1.369091 CGAATTCCTCGCAAGGTGGG 61.369 60.000 0.00 0.00 43.82 4.61
8094 11900 1.000896 AATTCCTCGCAAGGTGGGG 60.001 57.895 0.00 0.00 43.82 4.96
8095 11901 1.789576 AATTCCTCGCAAGGTGGGGT 61.790 55.000 0.00 0.00 43.82 4.95
8096 11902 2.484287 ATTCCTCGCAAGGTGGGGTG 62.484 60.000 0.00 0.00 43.82 4.61
8097 11903 4.722700 CCTCGCAAGGTGGGGTGG 62.723 72.222 0.00 0.00 37.94 4.61
8110 11916 1.001503 GGGTGGATGGGGATTTGCA 59.998 57.895 0.00 0.00 0.00 4.08
8114 11920 2.239402 GGTGGATGGGGATTTGCAATTT 59.761 45.455 0.00 0.00 0.00 1.82
8125 11931 4.933400 GGATTTGCAATTTGACATGCTTCT 59.067 37.500 0.00 0.00 42.97 2.85
8129 11935 6.768029 TTGCAATTTGACATGCTTCTTAAC 57.232 33.333 0.00 0.00 42.97 2.01
8130 11936 5.840715 TGCAATTTGACATGCTTCTTAACA 58.159 33.333 0.00 0.00 42.97 2.41
8131 11937 6.457355 TGCAATTTGACATGCTTCTTAACAT 58.543 32.000 0.00 0.00 42.97 2.71
8132 11938 6.930164 TGCAATTTGACATGCTTCTTAACATT 59.070 30.769 0.00 0.00 42.97 2.71
8133 11939 7.441760 TGCAATTTGACATGCTTCTTAACATTT 59.558 29.630 0.00 0.00 42.97 2.32
8134 11940 8.284693 GCAATTTGACATGCTTCTTAACATTTT 58.715 29.630 0.00 0.00 39.46 1.82
8137 11943 9.768662 ATTTGACATGCTTCTTAACATTTTTCT 57.231 25.926 0.00 0.00 0.00 2.52
8138 11944 8.578308 TTGACATGCTTCTTAACATTTTTCTG 57.422 30.769 0.00 0.00 0.00 3.02
8139 11945 7.715657 TGACATGCTTCTTAACATTTTTCTGT 58.284 30.769 0.00 0.00 0.00 3.41
8140 11946 8.196771 TGACATGCTTCTTAACATTTTTCTGTT 58.803 29.630 0.00 0.00 41.95 3.16
8141 11947 8.947055 ACATGCTTCTTAACATTTTTCTGTTT 57.053 26.923 0.00 0.00 39.88 2.83
8142 11948 9.382275 ACATGCTTCTTAACATTTTTCTGTTTT 57.618 25.926 0.00 0.00 39.88 2.43
8150 11956 9.914923 CTTAACATTTTTCTGTTTTAAGGTTGC 57.085 29.630 0.00 0.00 39.88 4.17
8151 11957 6.582437 ACATTTTTCTGTTTTAAGGTTGCG 57.418 33.333 0.00 0.00 0.00 4.85
8152 11958 5.522097 ACATTTTTCTGTTTTAAGGTTGCGG 59.478 36.000 0.00 0.00 0.00 5.69
8153 11959 3.719173 TTTCTGTTTTAAGGTTGCGGG 57.281 42.857 0.00 0.00 0.00 6.13
8154 11960 2.642154 TCTGTTTTAAGGTTGCGGGA 57.358 45.000 0.00 0.00 0.00 5.14
8155 11961 3.149005 TCTGTTTTAAGGTTGCGGGAT 57.851 42.857 0.00 0.00 0.00 3.85
8156 11962 3.492337 TCTGTTTTAAGGTTGCGGGATT 58.508 40.909 0.00 0.00 0.00 3.01
8157 11963 3.892588 TCTGTTTTAAGGTTGCGGGATTT 59.107 39.130 0.00 0.00 0.00 2.17
8158 11964 4.022676 TCTGTTTTAAGGTTGCGGGATTTC 60.023 41.667 0.00 0.00 0.00 2.17
8159 11965 3.637229 TGTTTTAAGGTTGCGGGATTTCA 59.363 39.130 0.00 0.00 0.00 2.69
8160 11966 4.234574 GTTTTAAGGTTGCGGGATTTCAG 58.765 43.478 0.00 0.00 0.00 3.02
8161 11967 1.459450 TAAGGTTGCGGGATTTCAGC 58.541 50.000 0.00 0.00 0.00 4.26
8162 11968 0.539438 AAGGTTGCGGGATTTCAGCA 60.539 50.000 0.00 0.00 39.33 4.41
8163 11969 0.323725 AGGTTGCGGGATTTCAGCAT 60.324 50.000 0.00 0.00 40.83 3.79
8164 11970 0.532115 GGTTGCGGGATTTCAGCATT 59.468 50.000 0.00 0.00 40.83 3.56
8165 11971 1.469767 GGTTGCGGGATTTCAGCATTC 60.470 52.381 0.00 0.00 40.83 2.67
8166 11972 1.202114 GTTGCGGGATTTCAGCATTCA 59.798 47.619 0.00 0.00 40.83 2.57
8167 11973 1.543607 TGCGGGATTTCAGCATTCAA 58.456 45.000 0.00 0.00 35.81 2.69
8168 11974 2.101783 TGCGGGATTTCAGCATTCAAT 58.898 42.857 0.00 0.00 35.81 2.57
8169 11975 2.496871 TGCGGGATTTCAGCATTCAATT 59.503 40.909 0.00 0.00 35.81 2.32
8170 11976 3.118542 GCGGGATTTCAGCATTCAATTC 58.881 45.455 0.00 0.00 0.00 2.17
8171 11977 3.181483 GCGGGATTTCAGCATTCAATTCT 60.181 43.478 0.00 0.00 0.00 2.40
8172 11978 4.357142 CGGGATTTCAGCATTCAATTCTG 58.643 43.478 0.00 0.00 0.00 3.02
8173 11979 4.142315 CGGGATTTCAGCATTCAATTCTGT 60.142 41.667 0.00 0.00 0.00 3.41
8174 11980 5.107133 GGGATTTCAGCATTCAATTCTGTG 58.893 41.667 0.00 0.00 0.00 3.66
8175 11981 4.565564 GGATTTCAGCATTCAATTCTGTGC 59.434 41.667 0.00 0.00 37.84 4.57
8176 11982 4.587584 TTTCAGCATTCAATTCTGTGCA 57.412 36.364 0.00 0.00 39.94 4.57
8177 11983 4.587584 TTCAGCATTCAATTCTGTGCAA 57.412 36.364 0.00 0.00 39.94 4.08
8178 11984 4.587584 TCAGCATTCAATTCTGTGCAAA 57.412 36.364 0.00 0.00 39.94 3.68
8179 11985 4.300803 TCAGCATTCAATTCTGTGCAAAC 58.699 39.130 0.00 0.00 39.94 2.93
8180 11986 4.052608 CAGCATTCAATTCTGTGCAAACA 58.947 39.130 0.00 0.00 39.94 2.83
8181 11987 4.688879 CAGCATTCAATTCTGTGCAAACAT 59.311 37.500 0.00 0.00 39.94 2.71
8182 11988 4.688879 AGCATTCAATTCTGTGCAAACATG 59.311 37.500 0.00 0.00 39.94 3.21
8183 11989 4.142988 GCATTCAATTCTGTGCAAACATGG 60.143 41.667 0.00 0.00 37.52 3.66
8184 11990 4.933505 TTCAATTCTGTGCAAACATGGA 57.066 36.364 0.00 0.00 0.00 3.41
8185 11991 4.241590 TCAATTCTGTGCAAACATGGAC 57.758 40.909 0.00 0.00 0.00 4.02
8186 11992 2.981805 CAATTCTGTGCAAACATGGACG 59.018 45.455 0.00 0.00 32.58 4.79
8187 11993 1.674359 TTCTGTGCAAACATGGACGT 58.326 45.000 0.00 0.00 32.58 4.34
8188 11994 1.225855 TCTGTGCAAACATGGACGTC 58.774 50.000 7.13 7.13 32.58 4.34
8189 11995 0.943673 CTGTGCAAACATGGACGTCA 59.056 50.000 18.91 3.91 32.58 4.35
8190 11996 1.333308 CTGTGCAAACATGGACGTCAA 59.667 47.619 18.91 6.46 32.58 3.18
8191 11997 1.952990 TGTGCAAACATGGACGTCAAT 59.047 42.857 18.91 9.15 32.58 2.57
8192 11998 2.031245 TGTGCAAACATGGACGTCAATC 60.031 45.455 18.91 0.00 32.58 2.67
8193 11999 1.539388 TGCAAACATGGACGTCAATCC 59.461 47.619 18.91 0.11 39.45 3.01
8194 12000 1.135402 GCAAACATGGACGTCAATCCC 60.135 52.381 18.91 0.00 38.06 3.85
8195 12001 1.472480 CAAACATGGACGTCAATCCCC 59.528 52.381 18.91 0.00 38.06 4.81
8196 12002 0.695924 AACATGGACGTCAATCCCCA 59.304 50.000 18.91 5.81 38.06 4.96
8197 12003 0.695924 ACATGGACGTCAATCCCCAA 59.304 50.000 18.91 0.00 38.06 4.12
8198 12004 1.340017 ACATGGACGTCAATCCCCAAG 60.340 52.381 18.91 5.14 38.06 3.61
8199 12005 0.991920 ATGGACGTCAATCCCCAAGT 59.008 50.000 18.91 0.00 38.06 3.16
8200 12006 0.323629 TGGACGTCAATCCCCAAGTC 59.676 55.000 18.91 0.00 38.06 3.01
8201 12007 0.739813 GGACGTCAATCCCCAAGTCG 60.740 60.000 18.91 0.00 31.94 4.18
8202 12008 0.037605 GACGTCAATCCCCAAGTCGT 60.038 55.000 11.55 0.00 0.00 4.34
8203 12009 1.203052 GACGTCAATCCCCAAGTCGTA 59.797 52.381 11.55 0.00 0.00 3.43
8204 12010 1.829222 ACGTCAATCCCCAAGTCGTAT 59.171 47.619 0.00 0.00 0.00 3.06
8205 12011 2.201732 CGTCAATCCCCAAGTCGTATG 58.798 52.381 0.00 0.00 0.00 2.39
8206 12012 2.561569 GTCAATCCCCAAGTCGTATGG 58.438 52.381 0.00 0.00 37.71 2.74
8207 12013 2.093128 GTCAATCCCCAAGTCGTATGGT 60.093 50.000 3.84 0.00 36.14 3.55
8208 12014 2.169769 TCAATCCCCAAGTCGTATGGTC 59.830 50.000 3.84 0.00 36.14 4.02
8209 12015 1.129058 ATCCCCAAGTCGTATGGTCC 58.871 55.000 3.84 0.00 36.14 4.46
8210 12016 0.252330 TCCCCAAGTCGTATGGTCCA 60.252 55.000 0.00 0.00 36.14 4.02
8211 12017 0.616371 CCCCAAGTCGTATGGTCCAA 59.384 55.000 0.00 0.00 36.14 3.53
8212 12018 1.406887 CCCCAAGTCGTATGGTCCAAG 60.407 57.143 0.00 0.00 36.14 3.61
8213 12019 1.553248 CCCAAGTCGTATGGTCCAAGA 59.447 52.381 0.00 0.00 36.14 3.02
8214 12020 2.618053 CCAAGTCGTATGGTCCAAGAC 58.382 52.381 14.23 14.23 33.08 3.01
8215 12021 2.233922 CCAAGTCGTATGGTCCAAGACT 59.766 50.000 17.32 17.32 43.16 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
479 480 2.422803 CCATATCCACCCGTTCCAATGT 60.423 50.000 0.00 0.00 0.00 2.71
513 514 1.067295 TCCCATCTTGGAGTTGTGCT 58.933 50.000 0.00 0.00 40.96 4.40
580 1121 5.766222 ACAACTAACTCTAGTACAACCACG 58.234 41.667 0.00 0.00 37.39 4.94
604 1145 9.574577 TCCCAATATCATTAGTTATATGGAGGT 57.425 33.333 0.00 0.00 0.00 3.85
614 1155 8.477256 CACAAACCAATCCCAATATCATTAGTT 58.523 33.333 0.00 0.00 0.00 2.24
615 1156 7.417797 GCACAAACCAATCCCAATATCATTAGT 60.418 37.037 0.00 0.00 0.00 2.24
616 1157 6.925165 GCACAAACCAATCCCAATATCATTAG 59.075 38.462 0.00 0.00 0.00 1.73
617 1158 6.382282 TGCACAAACCAATCCCAATATCATTA 59.618 34.615 0.00 0.00 0.00 1.90
618 1159 5.189342 TGCACAAACCAATCCCAATATCATT 59.811 36.000 0.00 0.00 0.00 2.57
620 1161 4.092279 TGCACAAACCAATCCCAATATCA 58.908 39.130 0.00 0.00 0.00 2.15
621 1162 4.685924 CTGCACAAACCAATCCCAATATC 58.314 43.478 0.00 0.00 0.00 1.63
622 1163 3.118665 GCTGCACAAACCAATCCCAATAT 60.119 43.478 0.00 0.00 0.00 1.28
623 1164 2.233431 GCTGCACAAACCAATCCCAATA 59.767 45.455 0.00 0.00 0.00 1.90
624 1165 1.002315 GCTGCACAAACCAATCCCAAT 59.998 47.619 0.00 0.00 0.00 3.16
625 1166 0.392336 GCTGCACAAACCAATCCCAA 59.608 50.000 0.00 0.00 0.00 4.12
627 1168 1.080569 CGCTGCACAAACCAATCCC 60.081 57.895 0.00 0.00 0.00 3.85
628 1169 0.664166 CACGCTGCACAAACCAATCC 60.664 55.000 0.00 0.00 0.00 3.01
632 1173 1.313772 ATTACACGCTGCACAAACCA 58.686 45.000 0.00 0.00 0.00 3.67
634 1175 4.078363 ACATATTACACGCTGCACAAAC 57.922 40.909 0.00 0.00 0.00 2.93
635 1176 4.023622 ACAACATATTACACGCTGCACAAA 60.024 37.500 0.00 0.00 0.00 2.83
636 1177 3.500299 ACAACATATTACACGCTGCACAA 59.500 39.130 0.00 0.00 0.00 3.33
638 1179 3.740044 ACAACATATTACACGCTGCAC 57.260 42.857 0.00 0.00 0.00 4.57
641 1182 5.448438 ACAACAACAACATATTACACGCTG 58.552 37.500 0.00 0.00 0.00 5.18
642 1183 5.682943 ACAACAACAACATATTACACGCT 57.317 34.783 0.00 0.00 0.00 5.07
652 3007 3.027412 TGCTACCCAACAACAACAACAT 58.973 40.909 0.00 0.00 0.00 2.71
667 3022 4.737855 TCTTGTAGAGGAATGTGCTACC 57.262 45.455 0.00 0.00 34.94 3.18
674 3029 9.829507 ATAGTCAATCTTTCTTGTAGAGGAATG 57.170 33.333 0.00 0.00 0.00 2.67
685 3040 9.232473 GGAAACAAGGTATAGTCAATCTTTCTT 57.768 33.333 0.00 0.00 0.00 2.52
686 3041 8.383175 TGGAAACAAGGTATAGTCAATCTTTCT 58.617 33.333 0.00 0.00 37.44 2.52
687 3042 8.561738 TGGAAACAAGGTATAGTCAATCTTTC 57.438 34.615 0.00 0.00 37.44 2.62
706 3061 9.638239 TCTCAAAATATAAGTGCAAATGGAAAC 57.362 29.630 0.00 0.00 0.00 2.78
709 3064 9.806203 CATTCTCAAAATATAAGTGCAAATGGA 57.194 29.630 0.00 0.00 0.00 3.41
710 3065 9.806203 TCATTCTCAAAATATAAGTGCAAATGG 57.194 29.630 0.00 0.00 0.00 3.16
713 3068 9.806203 CCATCATTCTCAAAATATAAGTGCAAA 57.194 29.630 0.00 0.00 0.00 3.68
714 3069 8.415553 CCCATCATTCTCAAAATATAAGTGCAA 58.584 33.333 0.00 0.00 0.00 4.08
715 3070 7.014518 CCCCATCATTCTCAAAATATAAGTGCA 59.985 37.037 0.00 0.00 0.00 4.57
716 3071 7.373493 CCCCATCATTCTCAAAATATAAGTGC 58.627 38.462 0.00 0.00 0.00 4.40
717 3072 7.524367 GCCCCCATCATTCTCAAAATATAAGTG 60.524 40.741 0.00 0.00 0.00 3.16
718 3073 6.494835 GCCCCCATCATTCTCAAAATATAAGT 59.505 38.462 0.00 0.00 0.00 2.24
719 3074 6.349611 CGCCCCCATCATTCTCAAAATATAAG 60.350 42.308 0.00 0.00 0.00 1.73
720 3075 5.476599 CGCCCCCATCATTCTCAAAATATAA 59.523 40.000 0.00 0.00 0.00 0.98
722 3077 3.828451 CGCCCCCATCATTCTCAAAATAT 59.172 43.478 0.00 0.00 0.00 1.28
724 3079 2.034124 CGCCCCCATCATTCTCAAAAT 58.966 47.619 0.00 0.00 0.00 1.82
741 3107 1.535028 TCAATCAATCACACACACGCC 59.465 47.619 0.00 0.00 0.00 5.68
749 3127 5.302568 GCCCCAATCTAATCAATCAATCACA 59.697 40.000 0.00 0.00 0.00 3.58
750 3128 5.302568 TGCCCCAATCTAATCAATCAATCAC 59.697 40.000 0.00 0.00 0.00 3.06
764 3142 3.033909 GCTTTCCTATTTGCCCCAATCT 58.966 45.455 0.00 0.00 0.00 2.40
766 3144 2.831565 TGCTTTCCTATTTGCCCCAAT 58.168 42.857 0.00 0.00 0.00 3.16
767 3145 2.317371 TGCTTTCCTATTTGCCCCAA 57.683 45.000 0.00 0.00 0.00 4.12
768 3146 2.109774 CATGCTTTCCTATTTGCCCCA 58.890 47.619 0.00 0.00 0.00 4.96
769 3147 1.202568 GCATGCTTTCCTATTTGCCCC 60.203 52.381 11.37 0.00 0.00 5.80
770 3148 1.536709 CGCATGCTTTCCTATTTGCCC 60.537 52.381 17.13 0.00 0.00 5.36
771 3149 1.405105 TCGCATGCTTTCCTATTTGCC 59.595 47.619 17.13 0.00 0.00 4.52
772 3150 2.542411 CCTCGCATGCTTTCCTATTTGC 60.542 50.000 17.13 0.00 0.00 3.68
773 3151 2.033801 CCCTCGCATGCTTTCCTATTTG 59.966 50.000 17.13 0.00 0.00 2.32
774 3152 2.092429 TCCCTCGCATGCTTTCCTATTT 60.092 45.455 17.13 0.00 0.00 1.40
775 3153 1.490490 TCCCTCGCATGCTTTCCTATT 59.510 47.619 17.13 0.00 0.00 1.73
776 3154 1.071385 CTCCCTCGCATGCTTTCCTAT 59.929 52.381 17.13 0.00 0.00 2.57
777 3155 0.465705 CTCCCTCGCATGCTTTCCTA 59.534 55.000 17.13 0.00 0.00 2.94
778 3156 1.222936 CTCCCTCGCATGCTTTCCT 59.777 57.895 17.13 0.00 0.00 3.36
784 3162 1.596477 CTAAGCCTCCCTCGCATGC 60.596 63.158 7.91 7.91 0.00 4.06
820 3198 1.821216 CTAAGCCTCCCTCGCAAAAA 58.179 50.000 0.00 0.00 0.00 1.94
821 3199 0.676782 GCTAAGCCTCCCTCGCAAAA 60.677 55.000 0.00 0.00 0.00 2.44
822 3200 1.078426 GCTAAGCCTCCCTCGCAAA 60.078 57.895 0.00 0.00 0.00 3.68
824 3202 0.686441 TAAGCTAAGCCTCCCTCGCA 60.686 55.000 0.00 0.00 0.00 5.10
825 3203 0.032815 CTAAGCTAAGCCTCCCTCGC 59.967 60.000 0.00 0.00 0.00 5.03
826 3204 0.676736 CCTAAGCTAAGCCTCCCTCG 59.323 60.000 0.00 0.00 0.00 4.63
827 3205 1.967779 CTCCTAAGCTAAGCCTCCCTC 59.032 57.143 0.00 0.00 0.00 4.30
829 3207 1.052617 CCTCCTAAGCTAAGCCTCCC 58.947 60.000 0.00 0.00 0.00 4.30
831 3209 1.689813 GTCCCTCCTAAGCTAAGCCTC 59.310 57.143 0.00 0.00 0.00 4.70
835 3213 1.404843 AGCGTCCCTCCTAAGCTAAG 58.595 55.000 0.00 0.00 36.28 2.18
886 3309 5.782331 TCTCTCTCTCTCTTTGGATTGGAAA 59.218 40.000 0.00 0.00 0.00 3.13
887 3310 5.336945 TCTCTCTCTCTCTTTGGATTGGAA 58.663 41.667 0.00 0.00 0.00 3.53
888 3311 4.940483 TCTCTCTCTCTCTTTGGATTGGA 58.060 43.478 0.00 0.00 0.00 3.53
890 3313 4.099881 CCCTCTCTCTCTCTCTTTGGATTG 59.900 50.000 0.00 0.00 0.00 2.67
891 3314 4.289245 CCCTCTCTCTCTCTCTTTGGATT 58.711 47.826 0.00 0.00 0.00 3.01
892 3315 3.374098 CCCCTCTCTCTCTCTCTTTGGAT 60.374 52.174 0.00 0.00 0.00 3.41
893 3316 2.024464 CCCCTCTCTCTCTCTCTTTGGA 60.024 54.545 0.00 0.00 0.00 3.53
894 3317 2.024464 TCCCCTCTCTCTCTCTCTTTGG 60.024 54.545 0.00 0.00 0.00 3.28
903 3326 0.478507 CTCCCTCTCCCCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
904 3327 0.254107 ACTCCCTCTCCCCTCTCTCT 60.254 60.000 0.00 0.00 0.00 3.10
905 3328 0.106217 CACTCCCTCTCCCCTCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
906 3329 1.589399 CCACTCCCTCTCCCCTCTCT 61.589 65.000 0.00 0.00 0.00 3.10
907 3330 1.075600 CCACTCCCTCTCCCCTCTC 60.076 68.421 0.00 0.00 0.00 3.20
908 3331 1.456518 AACCACTCCCTCTCCCCTCT 61.457 60.000 0.00 0.00 0.00 3.69
909 3332 1.081277 AACCACTCCCTCTCCCCTC 59.919 63.158 0.00 0.00 0.00 4.30
910 3333 1.229658 CAACCACTCCCTCTCCCCT 60.230 63.158 0.00 0.00 0.00 4.79
911 3334 2.301738 CCAACCACTCCCTCTCCCC 61.302 68.421 0.00 0.00 0.00 4.81
912 3335 2.301738 CCCAACCACTCCCTCTCCC 61.302 68.421 0.00 0.00 0.00 4.30
913 3336 1.134438 AACCCAACCACTCCCTCTCC 61.134 60.000 0.00 0.00 0.00 3.71
955 3378 1.466526 GGATGGGGATGGGGAATGG 59.533 63.158 0.00 0.00 0.00 3.16
956 3379 1.466526 GGGATGGGGATGGGGAATG 59.533 63.158 0.00 0.00 0.00 2.67
957 3380 1.784315 GGGGATGGGGATGGGGAAT 60.784 63.158 0.00 0.00 0.00 3.01
958 3381 2.370963 GGGGATGGGGATGGGGAA 60.371 66.667 0.00 0.00 0.00 3.97
959 3382 3.078909 ATGGGGATGGGGATGGGGA 62.079 63.158 0.00 0.00 0.00 4.81
960 3383 2.455122 ATGGGGATGGGGATGGGG 60.455 66.667 0.00 0.00 0.00 4.96
961 3384 2.551413 GGATGGGGATGGGGATGGG 61.551 68.421 0.00 0.00 0.00 4.00
962 3385 2.551413 GGGATGGGGATGGGGATGG 61.551 68.421 0.00 0.00 0.00 3.51
963 3386 2.551413 GGGGATGGGGATGGGGATG 61.551 68.421 0.00 0.00 0.00 3.51
964 3387 2.120854 GGGGATGGGGATGGGGAT 60.121 66.667 0.00 0.00 0.00 3.85
965 3388 3.728081 TGGGGATGGGGATGGGGA 61.728 66.667 0.00 0.00 0.00 4.81
1472 3951 2.203938 GGTCCTGGTCCTGGTGGA 60.204 66.667 14.11 2.52 40.69 4.02
1485 3964 2.203938 TGGTCCTGGTCCTGGTCC 60.204 66.667 19.96 19.96 33.07 4.46
1509 3988 3.867783 TCGTGGTGGTGGTGGTGG 61.868 66.667 0.00 0.00 0.00 4.61
1510 3989 2.590575 GTCGTGGTGGTGGTGGTG 60.591 66.667 0.00 0.00 0.00 4.17
1511 3990 3.868985 GGTCGTGGTGGTGGTGGT 61.869 66.667 0.00 0.00 0.00 4.16
1512 3991 3.867783 TGGTCGTGGTGGTGGTGG 61.868 66.667 0.00 0.00 0.00 4.61
1514 3993 4.230002 CGTGGTCGTGGTGGTGGT 62.230 66.667 0.00 0.00 0.00 4.16
1525 4004 4.717313 GGCCCTGGGAACGTGGTC 62.717 72.222 19.27 0.00 0.00 4.02
1532 4011 2.941025 CCCTCTTGGCCCTGGGAA 60.941 66.667 19.27 1.11 42.11 3.97
1617 4135 3.249189 TCCTGGTCCTGGTGGTGC 61.249 66.667 14.11 0.00 34.23 5.01
1635 4153 3.086600 GGCTCCTCCTGGACCTGG 61.087 72.222 11.18 11.18 37.46 4.45
1636 4154 3.086600 GGGCTCCTCCTGGACCTG 61.087 72.222 0.00 0.00 37.46 4.00
1637 4155 3.288381 AGGGCTCCTCCTGGACCT 61.288 66.667 0.00 0.00 37.46 3.85
1659 4177 1.304381 GGCTTCATCCAACAGGCCA 60.304 57.895 5.01 0.00 39.38 5.36
1660 4178 2.409870 CGGCTTCATCCAACAGGCC 61.410 63.158 0.00 0.00 36.60 5.19
1661 4179 3.056313 GCGGCTTCATCCAACAGGC 62.056 63.158 0.00 0.00 0.00 4.85
1679 4197 2.689034 GGAGGTGGAGGTGGAGGG 60.689 72.222 0.00 0.00 0.00 4.30
1689 4207 2.203998 AGGTGGAGGTGGAGGTGG 60.204 66.667 0.00 0.00 0.00 4.61
1694 4212 2.203938 GGTGGAGGTGGAGGTGGA 60.204 66.667 0.00 0.00 0.00 4.02
1695 4213 2.529136 TGGTGGAGGTGGAGGTGG 60.529 66.667 0.00 0.00 0.00 4.61
1696 4214 2.596851 CCTGGTGGAGGTGGAGGTG 61.597 68.421 0.00 0.00 37.02 4.00
1698 4216 2.122729 TCCTGGTGGAGGTGGAGG 59.877 66.667 0.00 0.00 43.37 4.30
1699 4217 2.294078 GGTCCTGGTGGAGGTGGAG 61.294 68.421 0.00 0.00 44.16 3.86
1700 4218 2.203938 GGTCCTGGTGGAGGTGGA 60.204 66.667 0.00 0.00 44.16 4.02
1701 4219 2.529136 TGGTCCTGGTGGAGGTGG 60.529 66.667 0.00 0.00 44.16 4.61
1702 4220 2.596851 CCTGGTCCTGGTGGAGGTG 61.597 68.421 6.63 0.00 44.16 4.00
1703 4221 2.203998 CCTGGTCCTGGTGGAGGT 60.204 66.667 6.63 0.00 44.16 3.85
1705 4223 2.294078 GGTCCTGGTCCTGGTGGAG 61.294 68.421 14.11 0.00 44.16 3.86
1706 4224 2.203938 GGTCCTGGTCCTGGTGGA 60.204 66.667 14.11 2.52 40.69 4.02
1707 4225 2.529136 TGGTCCTGGTCCTGGTGG 60.529 66.667 14.11 0.19 0.00 4.61
1708 4226 2.596851 CCTGGTCCTGGTCCTGGTG 61.597 68.421 22.04 6.75 38.64 4.17
1709 4227 2.203998 CCTGGTCCTGGTCCTGGT 60.204 66.667 22.04 0.00 38.64 4.00
1711 4229 1.992277 CCTCCTGGTCCTGGTCCTG 60.992 68.421 14.11 10.26 0.00 3.86
1713 4231 2.689034 CCCTCCTGGTCCTGGTCC 60.689 72.222 14.11 2.75 0.00 4.46
1717 4235 3.086600 GAGGCCCTCCTGGTCCTG 61.087 72.222 0.00 0.00 44.46 3.86
1720 4238 2.671682 GTTGAGGCCCTCCTGGTC 59.328 66.667 8.62 0.00 44.46 4.02
1721 4239 2.936032 GGTTGAGGCCCTCCTGGT 60.936 66.667 8.62 0.00 44.46 4.00
1722 4240 2.612115 AGGTTGAGGCCCTCCTGG 60.612 66.667 8.62 0.00 44.46 4.45
1723 4241 2.993853 GAGGTTGAGGCCCTCCTG 59.006 66.667 8.62 0.00 44.46 3.86
1726 4244 2.674220 CCAGGAGGTTGAGGCCCTC 61.674 68.421 2.98 2.98 46.49 4.30
1738 4265 0.397941 TCCTTGTGTTGCTCCAGGAG 59.602 55.000 12.81 12.81 0.00 3.69
1771 4349 2.315176 CTCCTCCTCGTGATCATCCTT 58.685 52.381 0.00 0.00 0.00 3.36
1772 4350 1.480312 CCTCCTCCTCGTGATCATCCT 60.480 57.143 0.00 0.00 0.00 3.24
1773 4351 0.965439 CCTCCTCCTCGTGATCATCC 59.035 60.000 0.00 0.00 0.00 3.51
1775 4353 1.407936 CACCTCCTCCTCGTGATCAT 58.592 55.000 0.00 0.00 0.00 2.45
1776 4354 0.684479 CCACCTCCTCCTCGTGATCA 60.684 60.000 0.00 0.00 0.00 2.92
1779 4357 1.000771 CTCCACCTCCTCCTCGTGA 60.001 63.158 0.00 0.00 0.00 4.35
1782 4360 1.954362 CTTGCTCCACCTCCTCCTCG 61.954 65.000 0.00 0.00 0.00 4.63
1783 4361 1.621672 CCTTGCTCCACCTCCTCCTC 61.622 65.000 0.00 0.00 0.00 3.71
1785 4363 2.674220 CCCTTGCTCCACCTCCTCC 61.674 68.421 0.00 0.00 0.00 4.30
1786 4364 2.674220 CCCCTTGCTCCACCTCCTC 61.674 68.421 0.00 0.00 0.00 3.71
1787 4365 2.498820 ATCCCCTTGCTCCACCTCCT 62.499 60.000 0.00 0.00 0.00 3.69
1791 4369 2.440980 GCATCCCCTTGCTCCACC 60.441 66.667 0.00 0.00 39.57 4.61
1792 4370 1.304381 TTGCATCCCCTTGCTCCAC 60.304 57.895 0.00 0.00 43.18 4.02
1793 4371 1.304381 GTTGCATCCCCTTGCTCCA 60.304 57.895 0.00 0.00 43.18 3.86
1795 4373 0.685458 ATGGTTGCATCCCCTTGCTC 60.685 55.000 11.33 0.00 43.18 4.26
1796 4374 0.630673 TATGGTTGCATCCCCTTGCT 59.369 50.000 11.33 0.00 43.18 3.91
1800 4378 2.421725 TCATCTATGGTTGCATCCCCT 58.578 47.619 11.33 1.68 0.00 4.79
1801 4379 2.957402 TCATCTATGGTTGCATCCCC 57.043 50.000 11.33 1.04 0.00 4.81
1803 4381 7.681304 GCATTATCATCATCTATGGTTGCATCC 60.681 40.741 6.88 6.88 36.15 3.51
1804 4382 7.067129 AGCATTATCATCATCTATGGTTGCATC 59.933 37.037 0.00 0.00 36.15 3.91
1805 4383 6.890268 AGCATTATCATCATCTATGGTTGCAT 59.110 34.615 0.00 0.00 36.15 3.96
1806 4384 6.150474 CAGCATTATCATCATCTATGGTTGCA 59.850 38.462 0.00 0.00 36.15 4.08
1807 4385 6.150641 ACAGCATTATCATCATCTATGGTTGC 59.849 38.462 0.00 0.00 36.15 4.17
1808 4386 7.389607 TGACAGCATTATCATCATCTATGGTTG 59.610 37.037 0.00 0.00 36.15 3.77
1809 4387 7.455891 TGACAGCATTATCATCATCTATGGTT 58.544 34.615 0.00 0.00 36.15 3.67
1810 4388 7.012661 TGACAGCATTATCATCATCTATGGT 57.987 36.000 0.00 0.00 36.15 3.55
1811 4389 7.916914 TTGACAGCATTATCATCATCTATGG 57.083 36.000 0.00 0.00 36.15 2.74
1812 4390 8.780249 TGTTTGACAGCATTATCATCATCTATG 58.220 33.333 0.00 0.00 36.88 2.23
1813 4391 8.913487 TGTTTGACAGCATTATCATCATCTAT 57.087 30.769 0.00 0.00 0.00 1.98
1814 4392 8.913487 ATGTTTGACAGCATTATCATCATCTA 57.087 30.769 0.00 0.00 0.00 1.98
1815 4393 7.501225 TGATGTTTGACAGCATTATCATCATCT 59.499 33.333 14.73 0.00 39.86 2.90
1834 4550 4.643334 CACCACCTCATGATGATGATGTTT 59.357 41.667 4.88 0.00 35.83 2.83
1835 4551 4.204799 CACCACCTCATGATGATGATGTT 58.795 43.478 4.88 0.00 35.83 2.71
1836 4552 3.434596 CCACCACCTCATGATGATGATGT 60.435 47.826 4.88 0.00 37.79 3.06
1837 4553 3.146847 CCACCACCTCATGATGATGATG 58.853 50.000 4.88 0.00 37.97 3.07
1838 4554 3.050835 TCCACCACCTCATGATGATGAT 58.949 45.455 4.88 0.00 37.97 2.45
1839 4555 2.436911 CTCCACCACCTCATGATGATGA 59.563 50.000 4.88 0.00 37.07 2.92
1840 4556 2.847441 CTCCACCACCTCATGATGATG 58.153 52.381 4.88 0.00 0.00 3.07
1842 4558 0.543277 GCTCCACCACCTCATGATGA 59.457 55.000 4.88 0.00 0.00 2.92
1843 4559 0.253894 TGCTCCACCACCTCATGATG 59.746 55.000 0.00 0.00 0.00 3.07
1844 4560 0.994247 TTGCTCCACCACCTCATGAT 59.006 50.000 0.00 0.00 0.00 2.45
1848 4564 0.179020 CACTTTGCTCCACCACCTCA 60.179 55.000 0.00 0.00 0.00 3.86
1855 4571 6.489675 CATCATGTATTACACTTTGCTCCAC 58.510 40.000 0.00 0.00 0.00 4.02
1864 4580 3.312421 GCAACGGCATCATGTATTACACT 59.688 43.478 0.00 0.00 40.72 3.55
1868 4584 4.071961 AGAGCAACGGCATCATGTATTA 57.928 40.909 0.00 0.00 44.61 0.98
1869 4585 2.923121 AGAGCAACGGCATCATGTATT 58.077 42.857 0.00 0.00 44.61 1.89
1870 4586 2.615447 CAAGAGCAACGGCATCATGTAT 59.385 45.455 0.00 0.00 44.61 2.29
1875 4621 1.302752 AGCAAGAGCAACGGCATCA 60.303 52.632 0.00 0.00 45.49 3.07
1882 4628 0.950116 AGAGCAACAGCAAGAGCAAC 59.050 50.000 0.00 0.00 45.49 4.17
1883 4629 1.335810 CAAGAGCAACAGCAAGAGCAA 59.664 47.619 0.00 0.00 45.49 3.91
1888 4634 3.439129 TCATCATCAAGAGCAACAGCAAG 59.561 43.478 0.00 0.00 0.00 4.01
1896 4642 3.453353 TGTCCTGATCATCATCAAGAGCA 59.547 43.478 0.00 0.00 38.63 4.26
1900 4646 5.007823 GCTTCTTGTCCTGATCATCATCAAG 59.992 44.000 15.44 15.44 38.63 3.02
1917 4666 4.771590 TTGCTCAATAAGTGGCTTCTTG 57.228 40.909 5.94 2.00 31.64 3.02
1929 4678 6.610020 AGGTGGTACTAGTACATTGCTCAATA 59.390 38.462 29.38 4.64 37.78 1.90
1930 4679 5.425539 AGGTGGTACTAGTACATTGCTCAAT 59.574 40.000 29.38 10.29 37.78 2.57
1931 4680 4.775780 AGGTGGTACTAGTACATTGCTCAA 59.224 41.667 29.38 6.21 37.78 3.02
1932 4681 4.350245 AGGTGGTACTAGTACATTGCTCA 58.650 43.478 29.38 16.66 37.78 4.26
1966 4715 3.317711 TCCATGGCTGTTGTTAGTTGTTG 59.682 43.478 6.96 0.00 0.00 3.33
1969 4718 3.411446 TCTCCATGGCTGTTGTTAGTTG 58.589 45.455 6.96 0.00 0.00 3.16
2005 4922 2.034939 TGGCATCTTGAACTTGCACAAG 59.965 45.455 8.82 8.82 43.03 3.16
2007 4924 1.337703 GTGGCATCTTGAACTTGCACA 59.662 47.619 0.00 0.00 38.12 4.57
2008 4925 1.336240 GGTGGCATCTTGAACTTGCAC 60.336 52.381 0.00 0.00 38.12 4.57
2009 4926 0.961019 GGTGGCATCTTGAACTTGCA 59.039 50.000 0.00 0.00 38.12 4.08
2010 4927 0.244721 GGGTGGCATCTTGAACTTGC 59.755 55.000 0.00 0.00 35.64 4.01
2011 4928 1.270550 GTGGGTGGCATCTTGAACTTG 59.729 52.381 0.00 0.00 0.00 3.16
2012 4929 1.620822 GTGGGTGGCATCTTGAACTT 58.379 50.000 0.00 0.00 0.00 2.66
2013 4930 0.251341 GGTGGGTGGCATCTTGAACT 60.251 55.000 0.00 0.00 0.00 3.01
2014 4931 1.250840 GGGTGGGTGGCATCTTGAAC 61.251 60.000 0.00 0.00 0.00 3.18
2015 4932 1.076549 GGGTGGGTGGCATCTTGAA 59.923 57.895 0.00 0.00 0.00 2.69
2016 4933 1.724148 TTGGGTGGGTGGCATCTTGA 61.724 55.000 0.00 0.00 0.00 3.02
2041 4976 0.809385 CCCTCAGCAGCAATGTCTTG 59.191 55.000 0.00 0.00 35.36 3.02
2046 4981 0.809385 CTTGTCCCTCAGCAGCAATG 59.191 55.000 0.00 0.00 0.00 2.82
2704 5703 0.109342 ACAACACCTTGCTCCTCCAG 59.891 55.000 0.00 0.00 0.00 3.86
2708 5707 0.687354 ATCGACAACACCTTGCTCCT 59.313 50.000 0.00 0.00 0.00 3.69
2713 5712 4.822036 TGGTTAAATCGACAACACCTTG 57.178 40.909 8.21 0.00 0.00 3.61
6718 9922 2.726351 CCCCCGAGCCAGTTCTCTC 61.726 68.421 0.00 0.00 0.00 3.20
6804 10008 3.316573 CTCAGGTTCACCGGGCCTC 62.317 68.421 6.32 0.00 42.08 4.70
6941 10145 2.930040 CAGCGGAATCGAGCTTTTTCTA 59.070 45.455 0.00 0.00 42.52 2.10
7113 10322 4.553547 GCAAAGCAATAGCAACTCCTATCG 60.554 45.833 0.00 0.00 45.49 2.92
7164 10373 0.470766 ACCAAGTTAAGTCGGCCACA 59.529 50.000 2.24 0.00 0.00 4.17
7188 10397 5.952033 ACAATGCTGCAAAACAAAACAAAT 58.048 29.167 6.36 0.00 0.00 2.32
7268 10493 2.303311 TCCTCTCTCTTCAGTCGTCAGA 59.697 50.000 0.00 0.00 0.00 3.27
7373 10610 1.588305 GCTCAAACGCGCTCAAAACG 61.588 55.000 5.73 0.00 0.00 3.60
7412 10649 1.925888 CAAATGGAGGGAGGGAGGG 59.074 63.158 0.00 0.00 0.00 4.30
7413 10650 1.228510 GCAAATGGAGGGAGGGAGG 59.771 63.158 0.00 0.00 0.00 4.30
7414 10651 1.511613 TAGCAAATGGAGGGAGGGAG 58.488 55.000 0.00 0.00 0.00 4.30
7415 10652 2.057922 GATAGCAAATGGAGGGAGGGA 58.942 52.381 0.00 0.00 0.00 4.20
7416 10653 1.271054 CGATAGCAAATGGAGGGAGGG 60.271 57.143 0.00 0.00 0.00 4.30
7417 10654 1.694150 TCGATAGCAAATGGAGGGAGG 59.306 52.381 0.00 0.00 0.00 4.30
7419 10656 5.491070 CATAATCGATAGCAAATGGAGGGA 58.509 41.667 0.00 0.00 0.00 4.20
7420 10657 4.095483 GCATAATCGATAGCAAATGGAGGG 59.905 45.833 0.00 0.00 0.00 4.30
7421 10658 4.201753 CGCATAATCGATAGCAAATGGAGG 60.202 45.833 14.99 0.00 0.00 4.30
7422 10659 4.726021 GCGCATAATCGATAGCAAATGGAG 60.726 45.833 0.30 1.84 0.00 3.86
7423 10660 3.125146 GCGCATAATCGATAGCAAATGGA 59.875 43.478 0.30 0.00 0.00 3.41
7424 10661 3.125829 AGCGCATAATCGATAGCAAATGG 59.874 43.478 11.47 2.92 0.00 3.16
7425 10662 4.332186 AGCGCATAATCGATAGCAAATG 57.668 40.909 11.47 8.47 0.00 2.32
7426 10663 4.715896 CAAGCGCATAATCGATAGCAAAT 58.284 39.130 11.47 0.00 0.00 2.32
7427 10664 3.606846 GCAAGCGCATAATCGATAGCAAA 60.607 43.478 11.47 0.00 38.36 3.68
7428 10665 2.096268 GCAAGCGCATAATCGATAGCAA 60.096 45.455 11.47 0.00 38.36 3.91
7429 10666 1.460743 GCAAGCGCATAATCGATAGCA 59.539 47.619 11.47 0.00 38.36 3.49
7430 10667 1.525784 CGCAAGCGCATAATCGATAGC 60.526 52.381 11.47 2.66 38.40 2.97
7431 10668 1.985684 TCGCAAGCGCATAATCGATAG 59.014 47.619 11.47 0.00 38.40 2.08
7432 10669 1.719246 GTCGCAAGCGCATAATCGATA 59.281 47.619 11.47 0.00 38.40 2.92
7433 10670 0.508641 GTCGCAAGCGCATAATCGAT 59.491 50.000 11.47 0.00 38.40 3.59
7434 10671 0.804156 TGTCGCAAGCGCATAATCGA 60.804 50.000 11.47 8.19 38.40 3.59
7445 10682 5.220472 CCACACAAATAGAGTATGTCGCAAG 60.220 44.000 0.00 0.00 0.00 4.01
7450 10687 6.313905 CCTTGTCCACACAAATAGAGTATGTC 59.686 42.308 0.00 0.00 42.13 3.06
7518 10755 5.349817 AGCATTCACTTGAGATTGTAGTTCG 59.650 40.000 0.00 0.00 0.00 3.95
7521 10758 5.555017 ACAGCATTCACTTGAGATTGTAGT 58.445 37.500 0.00 0.00 0.00 2.73
7522 10759 5.873712 AGACAGCATTCACTTGAGATTGTAG 59.126 40.000 0.00 0.00 0.00 2.74
7523 10760 5.798132 AGACAGCATTCACTTGAGATTGTA 58.202 37.500 0.00 0.00 0.00 2.41
7524 10761 4.649692 AGACAGCATTCACTTGAGATTGT 58.350 39.130 0.00 0.00 0.00 2.71
7526 10763 4.903054 TGAGACAGCATTCACTTGAGATT 58.097 39.130 0.00 0.00 0.00 2.40
7527 10764 4.548451 TGAGACAGCATTCACTTGAGAT 57.452 40.909 0.00 0.00 0.00 2.75
7528 10765 4.202295 ACTTGAGACAGCATTCACTTGAGA 60.202 41.667 0.00 0.00 0.00 3.27
7529 10766 4.063689 ACTTGAGACAGCATTCACTTGAG 58.936 43.478 0.00 0.00 0.00 3.02
7530 10767 3.811497 CACTTGAGACAGCATTCACTTGA 59.189 43.478 0.00 0.00 0.00 3.02
7531 10768 3.811497 TCACTTGAGACAGCATTCACTTG 59.189 43.478 0.00 0.00 0.00 3.16
7532 10769 4.077300 TCACTTGAGACAGCATTCACTT 57.923 40.909 0.00 0.00 0.00 3.16
7533 10770 3.758755 TCACTTGAGACAGCATTCACT 57.241 42.857 0.00 0.00 0.00 3.41
7534 10771 4.720090 CATTCACTTGAGACAGCATTCAC 58.280 43.478 0.00 0.00 0.00 3.18
7535 10772 3.189910 GCATTCACTTGAGACAGCATTCA 59.810 43.478 0.00 0.00 0.00 2.57
7536 10773 3.439476 AGCATTCACTTGAGACAGCATTC 59.561 43.478 0.00 0.00 0.00 2.67
7537 10774 3.190744 CAGCATTCACTTGAGACAGCATT 59.809 43.478 0.00 0.00 0.00 3.56
7538 10775 2.747989 CAGCATTCACTTGAGACAGCAT 59.252 45.455 0.00 0.00 0.00 3.79
7539 10776 2.148768 CAGCATTCACTTGAGACAGCA 58.851 47.619 0.00 0.00 0.00 4.41
7540 10777 2.149578 ACAGCATTCACTTGAGACAGC 58.850 47.619 0.00 0.00 0.00 4.40
7541 10778 3.661944 AGACAGCATTCACTTGAGACAG 58.338 45.455 0.00 0.00 0.00 3.51
7542 10779 3.758755 AGACAGCATTCACTTGAGACA 57.241 42.857 0.00 0.00 0.00 3.41
7570 10807 7.455891 TCATTCATGATACACCTTGCTATCAT 58.544 34.615 0.00 0.00 39.62 2.45
7571 10808 6.829849 TCATTCATGATACACCTTGCTATCA 58.170 36.000 0.00 0.00 34.60 2.15
7572 10809 7.227314 TGTTCATTCATGATACACCTTGCTATC 59.773 37.037 0.00 0.00 36.56 2.08
7573 10810 7.012704 GTGTTCATTCATGATACACCTTGCTAT 59.987 37.037 16.46 0.00 39.75 2.97
7574 10811 6.316140 GTGTTCATTCATGATACACCTTGCTA 59.684 38.462 16.46 0.00 39.75 3.49
7575 10812 5.124457 GTGTTCATTCATGATACACCTTGCT 59.876 40.000 16.46 0.00 39.75 3.91
7586 10823 6.523840 TCATATCATCGGTGTTCATTCATGA 58.476 36.000 0.00 0.00 34.44 3.07
7698 10959 4.026310 GCAGCAGCACAATAACAATAATGC 60.026 41.667 0.00 0.00 41.58 3.56
7699 10960 5.231357 CAGCAGCAGCACAATAACAATAATG 59.769 40.000 3.17 0.00 45.49 1.90
7700 10961 5.345702 CAGCAGCAGCACAATAACAATAAT 58.654 37.500 3.17 0.00 45.49 1.28
7701 10962 4.735985 CAGCAGCAGCACAATAACAATAA 58.264 39.130 3.17 0.00 45.49 1.40
7729 10990 9.331282 CTTCTCTTCTCTACAAAAGGAGAAAAA 57.669 33.333 6.81 2.54 44.55 1.94
7730 10991 8.705594 TCTTCTCTTCTCTACAAAAGGAGAAAA 58.294 33.333 6.81 0.00 44.55 2.29
7734 10995 8.364142 TCTTTCTTCTCTTCTCTACAAAAGGAG 58.636 37.037 0.00 0.00 0.00 3.69
7735 10996 8.251383 TCTTTCTTCTCTTCTCTACAAAAGGA 57.749 34.615 0.00 0.00 0.00 3.36
7736 10997 8.934825 CATCTTTCTTCTCTTCTCTACAAAAGG 58.065 37.037 0.00 0.00 0.00 3.11
7737 10998 9.703892 TCATCTTTCTTCTCTTCTCTACAAAAG 57.296 33.333 0.00 0.00 0.00 2.27
7805 11478 9.719279 CTTGTACTAGCAGTAGACACTAATAAC 57.281 37.037 0.00 0.00 30.12 1.89
7806 11479 9.458727 ACTTGTACTAGCAGTAGACACTAATAA 57.541 33.333 4.10 0.00 30.12 1.40
7812 11485 4.082679 AGCACTTGTACTAGCAGTAGACAC 60.083 45.833 4.10 0.00 30.12 3.67
7846 11519 1.664659 CTTAACTAGCAGCAGCAGCAG 59.335 52.381 12.92 9.67 45.49 4.24
7847 11520 1.276138 TCTTAACTAGCAGCAGCAGCA 59.724 47.619 12.92 0.00 45.49 4.41
7848 11521 2.015736 TCTTAACTAGCAGCAGCAGC 57.984 50.000 3.17 0.46 45.49 5.25
7849 11522 2.871022 CCATCTTAACTAGCAGCAGCAG 59.129 50.000 3.17 1.45 45.49 4.24
7850 11523 2.501316 TCCATCTTAACTAGCAGCAGCA 59.499 45.455 3.17 0.00 45.49 4.41
7851 11524 3.185246 TCCATCTTAACTAGCAGCAGC 57.815 47.619 0.00 0.00 42.56 5.25
7852 11525 4.953667 TCATCCATCTTAACTAGCAGCAG 58.046 43.478 0.00 0.00 0.00 4.24
7853 11526 5.357742 TTCATCCATCTTAACTAGCAGCA 57.642 39.130 0.00 0.00 0.00 4.41
7854 11527 5.586243 TGTTTCATCCATCTTAACTAGCAGC 59.414 40.000 0.00 0.00 0.00 5.25
7855 11528 6.238320 GCTGTTTCATCCATCTTAACTAGCAG 60.238 42.308 0.00 0.00 0.00 4.24
7874 11547 3.982241 GCCTGCGCTTGGCTGTTT 61.982 61.111 28.71 0.00 46.38 2.83
7974 11749 2.502295 AGCTTCTTCTCCTTTGCACTG 58.498 47.619 0.00 0.00 0.00 3.66
8008 11787 4.728772 TGATGATCTGGAACAAACTTGGT 58.271 39.130 0.00 0.00 38.70 3.67
8037 11835 2.936919 TCCCAGCATATCACCATCAC 57.063 50.000 0.00 0.00 0.00 3.06
8076 11878 1.000896 CCCCACCTTGCGAGGAATT 60.001 57.895 27.65 0.59 46.74 2.17
8093 11899 1.499368 ATTGCAAATCCCCATCCACC 58.501 50.000 1.71 0.00 0.00 4.61
8094 11900 3.055240 TCAAATTGCAAATCCCCATCCAC 60.055 43.478 1.71 0.00 0.00 4.02
8095 11901 3.055240 GTCAAATTGCAAATCCCCATCCA 60.055 43.478 1.71 0.00 0.00 3.41
8096 11902 3.055240 TGTCAAATTGCAAATCCCCATCC 60.055 43.478 1.71 0.00 0.00 3.51
8097 11903 4.205065 TGTCAAATTGCAAATCCCCATC 57.795 40.909 1.71 0.00 0.00 3.51
8114 11920 7.715657 ACAGAAAAATGTTAAGAAGCATGTCA 58.284 30.769 0.00 0.00 0.00 3.58
8125 11931 8.596380 CGCAACCTTAAAACAGAAAAATGTTAA 58.404 29.630 0.00 0.00 42.49 2.01
8129 11935 5.050431 CCCGCAACCTTAAAACAGAAAAATG 60.050 40.000 0.00 0.00 0.00 2.32
8130 11936 5.053811 CCCGCAACCTTAAAACAGAAAAAT 58.946 37.500 0.00 0.00 0.00 1.82
8131 11937 4.159879 TCCCGCAACCTTAAAACAGAAAAA 59.840 37.500 0.00 0.00 0.00 1.94
8132 11938 3.700038 TCCCGCAACCTTAAAACAGAAAA 59.300 39.130 0.00 0.00 0.00 2.29
8133 11939 3.288964 TCCCGCAACCTTAAAACAGAAA 58.711 40.909 0.00 0.00 0.00 2.52
8134 11940 2.933573 TCCCGCAACCTTAAAACAGAA 58.066 42.857 0.00 0.00 0.00 3.02
8135 11941 2.642154 TCCCGCAACCTTAAAACAGA 57.358 45.000 0.00 0.00 0.00 3.41
8136 11942 3.934457 AATCCCGCAACCTTAAAACAG 57.066 42.857 0.00 0.00 0.00 3.16
8137 11943 3.637229 TGAAATCCCGCAACCTTAAAACA 59.363 39.130 0.00 0.00 0.00 2.83
8138 11944 4.234574 CTGAAATCCCGCAACCTTAAAAC 58.765 43.478 0.00 0.00 0.00 2.43
8139 11945 3.305744 GCTGAAATCCCGCAACCTTAAAA 60.306 43.478 0.00 0.00 0.00 1.52
8140 11946 2.230266 GCTGAAATCCCGCAACCTTAAA 59.770 45.455 0.00 0.00 0.00 1.52
8141 11947 1.816224 GCTGAAATCCCGCAACCTTAA 59.184 47.619 0.00 0.00 0.00 1.85
8142 11948 1.271652 TGCTGAAATCCCGCAACCTTA 60.272 47.619 0.00 0.00 0.00 2.69
8143 11949 0.539438 TGCTGAAATCCCGCAACCTT 60.539 50.000 0.00 0.00 0.00 3.50
8144 11950 0.323725 ATGCTGAAATCCCGCAACCT 60.324 50.000 0.00 0.00 37.20 3.50
8145 11951 0.532115 AATGCTGAAATCCCGCAACC 59.468 50.000 0.00 0.00 37.20 3.77
8146 11952 1.202114 TGAATGCTGAAATCCCGCAAC 59.798 47.619 0.00 0.00 37.20 4.17
8147 11953 1.543607 TGAATGCTGAAATCCCGCAA 58.456 45.000 0.00 0.00 37.20 4.85
8148 11954 1.543607 TTGAATGCTGAAATCCCGCA 58.456 45.000 0.00 0.00 38.14 5.69
8149 11955 2.877043 ATTGAATGCTGAAATCCCGC 57.123 45.000 0.00 0.00 0.00 6.13
8150 11956 4.142315 ACAGAATTGAATGCTGAAATCCCG 60.142 41.667 19.73 0.00 33.94 5.14
8151 11957 5.107133 CACAGAATTGAATGCTGAAATCCC 58.893 41.667 19.73 0.00 33.94 3.85
8152 11958 4.565564 GCACAGAATTGAATGCTGAAATCC 59.434 41.667 19.73 0.00 35.16 3.01
8153 11959 5.165676 TGCACAGAATTGAATGCTGAAATC 58.834 37.500 19.73 6.08 38.90 2.17
8154 11960 5.142061 TGCACAGAATTGAATGCTGAAAT 57.858 34.783 19.73 0.00 38.90 2.17
8155 11961 4.587584 TGCACAGAATTGAATGCTGAAA 57.412 36.364 19.73 2.06 38.90 2.69
8156 11962 4.587584 TTGCACAGAATTGAATGCTGAA 57.412 36.364 19.73 1.07 38.90 3.02
8157 11963 4.202131 TGTTTGCACAGAATTGAATGCTGA 60.202 37.500 19.73 0.00 38.90 4.26
8158 11964 4.052608 TGTTTGCACAGAATTGAATGCTG 58.947 39.130 11.61 11.61 38.90 4.41
8159 11965 4.325028 TGTTTGCACAGAATTGAATGCT 57.675 36.364 0.00 0.00 38.90 3.79
8160 11966 4.142988 CCATGTTTGCACAGAATTGAATGC 60.143 41.667 0.00 0.00 35.94 3.56
8161 11967 5.119588 GTCCATGTTTGCACAGAATTGAATG 59.880 40.000 0.00 0.00 35.94 2.67
8162 11968 5.232463 GTCCATGTTTGCACAGAATTGAAT 58.768 37.500 0.00 0.00 35.94 2.57
8163 11969 4.619973 GTCCATGTTTGCACAGAATTGAA 58.380 39.130 0.00 0.00 35.94 2.69
8164 11970 3.304592 CGTCCATGTTTGCACAGAATTGA 60.305 43.478 0.00 0.00 35.94 2.57
8165 11971 2.981805 CGTCCATGTTTGCACAGAATTG 59.018 45.455 0.00 0.00 35.94 2.32
8166 11972 2.622942 ACGTCCATGTTTGCACAGAATT 59.377 40.909 0.00 0.00 35.94 2.17
8167 11973 2.226437 GACGTCCATGTTTGCACAGAAT 59.774 45.455 3.51 0.00 35.94 2.40
8168 11974 1.601903 GACGTCCATGTTTGCACAGAA 59.398 47.619 3.51 0.00 35.94 3.02
8169 11975 1.225855 GACGTCCATGTTTGCACAGA 58.774 50.000 3.51 0.00 35.94 3.41
8170 11976 0.943673 TGACGTCCATGTTTGCACAG 59.056 50.000 14.12 0.00 35.94 3.66
8171 11977 1.383523 TTGACGTCCATGTTTGCACA 58.616 45.000 14.12 0.00 37.31 4.57
8172 11978 2.584791 GATTGACGTCCATGTTTGCAC 58.415 47.619 14.12 0.00 0.00 4.57
8173 11979 1.539388 GGATTGACGTCCATGTTTGCA 59.461 47.619 14.12 0.00 38.20 4.08
8174 11980 1.135402 GGGATTGACGTCCATGTTTGC 60.135 52.381 14.12 0.00 40.17 3.68
8175 11981 1.472480 GGGGATTGACGTCCATGTTTG 59.528 52.381 14.12 0.00 40.17 2.93
8176 11982 1.074727 TGGGGATTGACGTCCATGTTT 59.925 47.619 14.12 0.00 40.17 2.83
8177 11983 0.695924 TGGGGATTGACGTCCATGTT 59.304 50.000 14.12 0.00 40.17 2.71
8178 11984 0.695924 TTGGGGATTGACGTCCATGT 59.304 50.000 14.12 0.00 40.17 3.21
8179 11985 1.340017 ACTTGGGGATTGACGTCCATG 60.340 52.381 14.12 7.98 40.17 3.66
8180 11986 0.991920 ACTTGGGGATTGACGTCCAT 59.008 50.000 14.12 7.61 40.17 3.41
8181 11987 0.323629 GACTTGGGGATTGACGTCCA 59.676 55.000 14.12 1.38 40.17 4.02
8182 11988 0.739813 CGACTTGGGGATTGACGTCC 60.740 60.000 14.12 0.00 37.56 4.79
8183 11989 0.037605 ACGACTTGGGGATTGACGTC 60.038 55.000 9.11 9.11 0.00 4.34
8184 11990 1.259609 TACGACTTGGGGATTGACGT 58.740 50.000 0.00 0.00 36.52 4.34
8185 11991 2.201732 CATACGACTTGGGGATTGACG 58.798 52.381 0.00 0.00 0.00 4.35
8186 11992 2.093128 ACCATACGACTTGGGGATTGAC 60.093 50.000 0.00 0.00 38.64 3.18
8187 11993 2.169769 GACCATACGACTTGGGGATTGA 59.830 50.000 0.00 0.00 38.64 2.57
8188 11994 2.561569 GACCATACGACTTGGGGATTG 58.438 52.381 0.00 0.00 38.64 2.67
8189 11995 1.489230 GGACCATACGACTTGGGGATT 59.511 52.381 0.00 0.00 38.64 3.01
8190 11996 1.129058 GGACCATACGACTTGGGGAT 58.871 55.000 0.00 0.00 38.64 3.85
8191 11997 0.252330 TGGACCATACGACTTGGGGA 60.252 55.000 0.00 0.00 38.64 4.81
8192 11998 0.616371 TTGGACCATACGACTTGGGG 59.384 55.000 0.00 0.00 38.64 4.96
8193 11999 1.553248 TCTTGGACCATACGACTTGGG 59.447 52.381 0.00 0.00 38.64 4.12
8194 12000 2.233922 AGTCTTGGACCATACGACTTGG 59.766 50.000 13.09 0.00 40.26 3.61
8195 12001 3.594603 AGTCTTGGACCATACGACTTG 57.405 47.619 13.09 0.00 31.36 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.